View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13636_low_18 (Length: 249)
Name: NF13636_low_18
Description: NF13636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13636_low_18 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 97 - 249
Target Start/End: Complemental strand, 31465767 - 31465615
Alignment:
| Q |
97 |
gtgtatatccatttaaagcaaatgtacgtatataattcttcataaccataaacctaaatttcatttatctatattgtttgtgtgattgttaacattttct |
196 |
Q |
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| T |
31465767 |
gtgtatatccatttaaagcaaatgtacgtatataattcttcataaccataaacctaaatttcatttatctatattgtttgtgtgattgttaacattttct |
31465668 |
T |
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| Q |
197 |
tgaaaaatcaaaacatgagtccttcacaatttcatccaaagaaagaaatcatc |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31465667 |
tgaaaaatcaaaacatgagtccttcacaatttcatccaaagaaagaaatcatc |
31465615 |
T |
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