View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13637_high_6 (Length: 279)
Name: NF13637_high_6
Description: NF13637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13637_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 269
Target Start/End: Original strand, 51314693 - 51314936
Alignment:
| Q |
8 |
tttgaacacacaaggatattgtgatacatacataggggatgaaaatggctttatttaactcatttcacctggttgccattatatgaaatgaaatatatat |
107 |
Q |
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| T |
51314693 |
tttgaacacacaaggatattgtgatacatacataggggatgaaaatggctttatttaactcatttcacctggttgccattat------------------ |
51314774 |
T |
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| Q |
108 |
ctgaaaatagtaactgatgttgtagcaatgatattatgacaacacaaatgcaaatgtattgctaatatgaaaacaaacccatgagagtacatgatttggt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51314775 |
ctgaaaatagtaactgatgttgtagcaatgatattatgacaacacaaatgcaaatgtattgctaatatgaaaacaaacccatgagagtacatgatttggt |
51314874 |
T |
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| Q |
208 |
tttgttgtgttatataactaaatgtacctgtaggcttgtacatgtcacctacaactgatgat |
269 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51314875 |
tttgttgtgttatataactaaatgtacctgtaggcttgtacatgtcacctacaactgatgat |
51314936 |
T |
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