View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1363_low_12 (Length: 228)
Name: NF1363_low_12
Description: NF1363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1363_low_12 |
 | |
|
| [»] scaffold0155 (1 HSPs) |
| | |
|
| [»] scaffold0263 (1 HSPs) |
| | |
|
| [»] scaffold0024 (1 HSPs) |
| | |
|
| [»] scaffold0671 (1 HSPs) |
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| [»] scaffold0035 (1 HSPs) |
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|
| [»] scaffold0957 (1 HSPs) |
| | |
|
| [»] scaffold0638 (1 HSPs) |
| | |
|
| [»] scaffold0056 (1 HSPs) |
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| [»] scaffold0034 (1 HSPs) |
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| [»] scaffold1869 (1 HSPs) |
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| [»] scaffold0102 (1 HSPs) |
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| [»] scaffold0386 (1 HSPs) |
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| [»] scaffold0111 (1 HSPs) |
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| [»] scaffold0062 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 4818999 - 4819078
Alignment:
| Q |
34 |
aatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4818999 |
aatagagcaagttacctatttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
4819078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 4785990 - 4786077
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4785990 |
atctatttgcaatagagcaagttacctgtttttggttgcagaaaagtaagca--gcggttaggattcttcgaatccctcctatttatatt |
4786077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 16365869 - 16365942
Alignment:
| Q |
38 |
gagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||| |
|
|
| T |
16365869 |
gagcaagttacatgtttttggttgcaaaaaagtaagca--gcggttaggattcttcgaatctcccctatttatatt |
16365942 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 9131065 - 9131134
Alignment:
| Q |
29 |
tttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
9131065 |
tttgcaatagagcaagttaactgtttttggttgcaaaaaagtaagc--tgcggttaggattcttcgaatccc |
9131134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 7397308 - 7397362
Alignment:
| Q |
41 |
caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaat |
97 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
7397308 |
caagttatctgtttttggttgcagaaaagtaagca--gcggttaggattcttcgaat |
7397362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 39273126 - 39273053
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc |
98 |
Q |
| |
|
||||||||| || |||||||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
39273126 |
atctatttgcaacagagcaagtttacctatttttggttgcagaaaagtaagca--gcggttaggatccttcgaatc |
39273053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 5108714 - 5108801
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| || |||||||||| || || ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
5108714 |
atctgtttgcaagagagcaagtttacttgattttggttgcagaaaagtaagca--gcggttaggattctttgaatccc-cctatttatatt |
5108801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 17153088 - 17153049
Alignment:
| Q |
39 |
agcaagttacctgtttttggttgcagaaaagtaagcagcg |
78 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17153088 |
agcaagttacctgtttttggttgcagaaaagtaagcagcg |
17153049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 20582405 - 20582479
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||| || |||||||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
20582405 |
atctatttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcagttaggattcttcgaatccc |
20582479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 7492199 - 7492130
Alignment:
| Q |
37 |
agagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||||||||||| |
|
|
| T |
7492199 |
agagcaagttacctgtttttggttgcagaaaagtaagaag------taggattcttccaatccc-cctatttatatt |
7492130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 1848177 - 1848105
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc |
98 |
Q |
| |
|
|||| ||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
1848177 |
atctgtttgaaacagagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcggttatgattcttcgaatc |
1848105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 18662603 - 18662663
Alignment:
| Q |
37 |
agagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||||||||||| |
|
|
| T |
18662603 |
agagcaagttacctgtttt-ggttgcagaaatgtaagca--gcggttaggactcttcgaatccc |
18662663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 9731561 - 9731522
Alignment:
| Q |
39 |
agcaagttacctgtttttggttgcagaaaagtaagcagcg |
78 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9731561 |
agcaagttacctgtttttggttgcataaaagtaagcagcg |
9731522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 6042621 - 6042685
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| ||||||||||||||| |||||| |||||||||||| |
|
|
| T |
6042621 |
ttacctttttttggttgcagaaaaataagca--gcggttaggattctttgaatcc--cctatttatatt |
6042685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 8054012 - 8053938
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||| |||| |||||||| ||||||||| ||||||||||||||||||| || |||||||||||| ||||||| |
|
|
| T |
8054012 |
atctatttgcaatatagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcagttaggattctttgaatccc |
8053938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 15869744 - 15869831
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| |||||| |||||||||||||||||||||| |||||||| || ||||||||| |||| ||||||| ||| |||||||| |
|
|
| T |
15869744 |
atctgtttgcaatagaaaaagttacctgtttttggttgcataaaagtaaaca--acggttaggactctttgaatcccccctgtttatatt |
15869831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 16297770 - 16297729
Alignment:
| Q |
37 |
agagcaagttacctgtttttggttgcagaaaagtaagcagcg |
78 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16297770 |
agagtaagttacctatttttggttgcagaaaagtaagcagcg |
16297729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 16058961 - 16058908
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| || |||||||||||||||||||| |
|
|
| T |
16058961 |
ttacttgtttttggttgcagtaaagtaagca--gctgttaggattcttcgaatccc |
16058908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 3734746 - 3734796
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagca |
75 |
Q |
| |
|
|||| |||| || ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
3734746 |
atctgtttgcaacagagcaagttacctgtttt-ggttgcagaaaagtaagca |
3734796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 8978956 - 8978868
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| |||||| |||||| |||||||||||||||||||||| |||||| || |||||||||||| |||||| || |||||||| |
|
|
| T |
8978956 |
atctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagca--gcagttaggattctttaaatcccctctgtttatatt |
8978868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 72
Target Start/End: Original strand, 19153462 - 19153493
Alignment:
| Q |
41 |
caagttacctgtttttggttgcagaaaagtaa |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
19153462 |
caagttacctgtttttggttgcagaaaagtaa |
19153493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 72
Target Start/End: Original strand, 20752861 - 20752892
Alignment:
| Q |
41 |
caagttacctgtttttggttgcagaaaagtaa |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
20752861 |
caagttacctgtttttggttgcagaaaagtaa |
20752892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 2563967 - 2564057
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattatt |
116 |
Q |
| |
|
|||| |||| || |||||||||| ||||| ||| | ||||||||||||||| |||| |||||||| ||||||||||| ||| ||||||||||| |
|
|
| T |
2563967 |
atctgtttgcaacagagcaagtttacctgctttagtttgcagaaaagtaagtagcg--gttaggatccttcgaatccc-cctgtttatattatt |
2564057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 3329585 - 3329542
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattc |
90 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3329585 |
ttacttgtttttggttgcagaaaagtaagca--gcggttaggattc |
3329542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 13289347 - 13289294
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| | |||||||| |||||||||||||| |
|
|
| T |
13289347 |
ttacctgtttttggttgcagaaaattaataa--gcggttagaattcttcgaatccc |
13289294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 55; Significance: 9e-23; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 16245679 - 16245593
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||||||| |
|
|
| T |
16245679 |
atctatttgcaacagagcaagttacctgtttttggttgcagaaaagtaagca--gcggttagaattctccgaatccc-cctatttatatt |
16245593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 8170042 - 8170095
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
8170042 |
ttacctgtttttggttgcagaaaagtatgca--gcggttaggattcttcgaatccc |
8170095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 12754851 - 12754798
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12754851 |
ttacctggttttggttgcagaaaagtaagca--gcggttaggattcttcgaatccc |
12754798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 17438351 - 17438287
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattattcga |
119 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
17438351 |
ttttggttgcagaaaagtaagcaacg--gttaggattcttcgaatcccctctatttatattgttcga |
17438287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 21303303 - 21303220
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
|||| |||| || |||||||||||| |||||| ||||||||||||||||||| |||||||||||| || ||||||| ||||||||| |
|
|
| T |
21303303 |
atctgtttgcaacagagcaagttacttgtttt-ggttgcagaaaagtaagca--gcggttaggattatttgaatcccccctatttat |
21303220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 16229882 - 16229831
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc |
98 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
16229882 |
ttacctgtttttggttgcaaaaaagtaagca--gcggttaggattcttcgaatc |
16229831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 27413825 - 27413778
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcg |
94 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
27413825 |
ttacctgtttttggttgcagaaaagtaagca--gcggttaggattcttcg |
27413778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 19908478 - 19908531
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
19908478 |
ttacctatttttggttgcagaaaagtaagca--gcagttaggattcttcgaatccc |
19908531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 19909901 - 19909848
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
19909901 |
ttacctgttttttgttgcagaaaagtaagca--gcggttaggattctttgaatccc |
19909848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 7495043 - 7494977
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | | |||||||| |||||||||| ||||||||||| |
|
|
| T |
7495043 |
ttacctgtttttggttgtagaaaagtaagca--gggattaggattattcgaatcccctctatttatatt |
7494977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 8770170 - 8770231
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
8770170 |
agagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcagttaggattcttcgaatccc |
8770231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 4650404 - 4650449
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4650404 |
ttttggttgcagaaaagtaagca--acggttaggattcttcgaatccc |
4650449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 5508484 - 5508532
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaa |
72 |
Q |
| |
|
|||| |||| ||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
5508484 |
atctgtttgcaatagagcaagttacatgttttttgttgcagaaaagtaa |
5508532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 12805810 - 12805765
Alignment:
| Q |
54 |
tttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccct |
101 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
12805810 |
tttggttgcagaaaagtaagca--ggggttaggattcttcgaatccct |
12805765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 10745051 - 10745101
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagca |
75 |
Q |
| |
|
||||||||| || ||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
10745051 |
atctatttgcaacagagcaagttacctg-ttttggttgcagaaatgtaagca |
10745101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 8143781 - 8143846
Alignment:
| Q |
41 |
caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||| || |||||||||||| ||||||| ||||||||| |
|
|
| T |
8143781 |
caagttacctgtttt-ggttgcagaaa-gtaagcaacg--gttaggattcttggaatcccccctatttat |
8143846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 19171791 - 19171732
Alignment:
| Q |
49 |
ctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
|||||||| |||||||||||||| |||| | |||||||||||||||||| | ||||||||| |
|
|
| T |
19171791 |
ctgttttttgttgcagaaaagtatgcagtg--gttaggattcttcgaatcacccctatttat |
19171732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 19925559 - 19925504
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttc |
93 |
Q |
| |
|
|||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||| |
|
|
| T |
19925559 |
agagcaagtttacctgttttggtttgcagaaaagtaagca--gcggttaggattcttc |
19925504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 21302068 - 21302143
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||| || |||||||||| |||| |||||| |||||||||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
21302068 |
atctgtttgcaacagagcaagtttacctttttttgattgcagaaaaataaacagcg--gttaggattcttcgaatccc |
21302143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 932921 - 932963
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaat |
97 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
932921 |
ttttggttgcagaaaagtaagca--gcggttagtattcttcgaat |
932963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 2167549 - 2167481
Alignment:
| Q |
41 |
caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||| ||||| |||||||||| || | |||||||||||||||||||| |||||||||||| |
|
|
| T |
2167549 |
caagttacctgtttt-ggttgtggaaaagtaagaagtg--gttaggattcttcgaatccc-cctatttatatt |
2167481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 8765268 - 8765329
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||| || |||| ||||||||||||||| |
|
|
| T |
8765268 |
agagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcagttaagattcttcgaatccc |
8765329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 21325491 - 21325564
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||| || |||||||||||||| ||| ||||||||||||||||| | ||||||| ||||||||| ||||| |
|
|
| T |
21325491 |
atctatttgcaacagagcaagttacctaattt-ggttgcagaaaagtaagta--gcggttatgattcttcgcatccc |
21325564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 3116369 - 3116321
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaa |
72 |
Q |
| |
|
|||| |||| || |||||||| |||||| |||||||||||||||||||| |
|
|
| T |
3116369 |
atctgtttgcaacagagcaagatacctggttttggttgcagaaaagtaa |
3116321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 18736604 - 18736556
Alignment:
| Q |
41 |
caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattctt |
92 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||| ||||||||||||||| |
|
|
| T |
18736604 |
caagttacctgtttt-ggttgcagaaaaataagca--gcggttaggattctt |
18736556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 24269767 - 24269833
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
24269767 |
ttacctgtttttggttgcagaaaagtaagca--gcggttaggattcttcgaatcccccctgtttatatt |
24269833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 18448491 - 18448404
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| || ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| | ||||||||||| |||||| |
|
|
| T |
18448491 |
atctgtttgcaacagagcaagttacctgtttttggttgcataaaagtaagca--acggttatgattctttgtatccctcctatatatatt |
18448404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 13314920 - 13314856
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||| |
|
|
| T |
13314920 |
ttacctgtttttggttgcagaaaagtaagca--acggttaagattcttcgaatcc--cctatttatatt |
13314856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 25182377 - 25182294
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctattta |
109 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||| || || | |||||||| |||| ||||||| | |||||| |
|
|
| T |
25182377 |
atctatttgcaacagagcaagttacctgtttttggttgcagaaaaggaaaca--gtggttaggactctttgaatcccccatattta |
25182294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 26394619 - 26394562
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
26394619 |
ttttggttgcagaaaagtaagca--acggttaggattcttcgaatccc-cctatttatatt |
26394562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 24114193 - 24114146
Alignment:
| Q |
64 |
gaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
24114193 |
gaaaagtaagcagcg--gttaggattcttcgaatcccccctatttatatt |
24114146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 24645008 - 24645042
Alignment:
| Q |
42 |
aagttacctgtttttggttgcagaaaagtaagcag |
76 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
24645008 |
aagttacctgtttttggttgcagaaaagtaagcag |
24645042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 24110590 - 24110532
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||| |||||||||| ||| |||||||| |
|
|
| T |
24110590 |
ttttggttgcagaaaagtaagca--ggggttaggattattcgaatcccccctgtttatatt |
24110532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 6885107 - 6885155
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaa |
72 |
Q |
| |
|
|||| |||| ||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
6885107 |
atctgtttgtaatagagtaagttacctgtttttggttgcagaaatgtaa |
6885155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 27659584 - 27659639
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcg |
78 |
Q |
| |
|
||||||||| || |||||||||| |||||||||| ||||||||||| ||||||||| |
|
|
| T |
27659584 |
atctatttgcaaaagagcaagtttacctgttttttgttgcagaaaattaagcagcg |
27659639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 29382288 - 29382222
Alignment:
| Q |
46 |
tacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattat |
115 |
Q |
| |
|
||||| |||||||||||||||||||||||| | |||||||||||||| || ||| ||| |||||||||| |
|
|
| T |
29382288 |
tacctatttttggttgcagaaaagtaagca--gtggttaggattcttc-aaacccccctgtttatattat |
29382222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 13698005 - 13698055
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcag |
76 |
Q |
| |
|
|||| |||| || |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
13698005 |
atctctttgcaacagagcaagttacctgttt--ggttgcagaaaagtaagcag |
13698055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 14626200 - 14626232
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagc |
77 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
14626200 |
ttacctttttttggttgcagaaaagtaagcagc |
14626232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 16404079 - 16404124
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||| ||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
16404079 |
ttttggctgcagaaaaataagcagcg--gttaggattcttcgaatccc |
16404124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 44010956 - 44010903
Alignment:
| Q |
41 |
caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaa |
96 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||| | ||||||| ||||||||||| |
|
|
| T |
44010956 |
caagttacatgtttttggttgcagaagagtaagta--gcggttaagattcttcgaa |
44010903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0155 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0155
Description:
Target: scaffold0155; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 35943 - 35857
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||| || | || |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
35943 |
atctatttggaacaaagaaagttacctgattttggttgcagaaaagtaagca--gcggttaggattcttagaatccc-cctatttatatt |
35857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 26603309 - 26603223
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| || |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26603309 |
atctgtttgcaacagagcagtttacctgtttttggttgtagaaaagtaagca--gcggttaggattcttcgaatccc-cctatttatatt |
26603223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 27909068 - 27908981
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| || |||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
27909068 |
atctgtttgcaacagagcaagtttacctgtttt-ggttgcagaaaattaagcagcg--gttaggattcttcgaatcccccctatttatatt |
27908981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 25887853 - 25887766
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| || |||||||||||||| ||||||||||||||||||||| || ||| ||| |||||||| |||||| |||||||||||| |
|
|
| T |
25887853 |
atctgtttgcaacagagcaagttacctatttttggttgcagaaaagtaacca--gcgattatgattcttcaaatcccccctatttatatt |
25887766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 29719169 - 29719097
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||||||| |||||||| |
|
|
| T |
29719169 |
agagcaagtttacctgtgtttggttgcagaaaagtaagca--gcagttaggattcttcgaatcccctctatttat |
29719097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 30411816 - 30411891
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||| || |||||||||| || |||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
30411816 |
atctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca--gcggttaggatttttcgaatccc |
30411891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 26667465 - 26667518
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||| |||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
26667465 |
ttacctgttttcggttgcagaaaagtaaaca--gcggttaggattcttcgaatccc |
26667518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 17349497 - 17349585
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| || |||||||||| || |||||||||||||| ||||||||||| ||||| || |||||||||||||| ||||||||||| |
|
|
| T |
17349497 |
atctgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagca--gcggtcagaattcttcgaatcccctctatttatatt |
17349585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 15339400 - 15339475
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||||||||| | |||||||| |||||||||||||||||| || ||||||||||||| |||||| ||||||||||| |
|
|
| T |
15339400 |
agagcaagtttatctgttttttgttgcagaaaagtaagca--gcagttaggattcttcaaatcccctctatttatatt |
15339475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 17198029 - 17198080
Alignment:
| Q |
47 |
acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
17198029 |
acctatttttggttgcagaaaagtaagca--gcggttaagattcttcgaatccc |
17198080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 31804827 - 31804794
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcg |
78 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
31804827 |
ttacctgtttttggttgcagaaaagtaagcagcg |
31804794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 28925700 - 28925745
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
28925700 |
ttttggttgcagaaaagtaagca--gaggttaggattcttcgaatccc |
28925745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 32085613 - 32085695
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
|||| |||| || ||||||||||||||| ||| ||||||||||||||||||| |||||||||| |||| |||||| ||||||||| |
|
|
| T |
32085613 |
atctgtttgcaacagagcaagttacctggttt-ggttgcagaaaagtaagca--gcggttaggactctttaaatccc-cctatttat |
32085695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 25618734 - 25618791
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||||||||| |||||| | |||||||||||||| || ||||||||| |
|
|
| T |
25618734 |
ttttggttgcagaaaagtaagca--gcggttcgaattcttcgaatccc-cccatttatatt |
25618791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 24090859 - 24090814
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||| ||||||||||| |
|
|
| T |
24090859 |
ttttggttgcagaaaagtaagca--gtggttaggatgcttcgaatccc |
24090814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 25530614 - 25530659
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||| || ||||||||||| |||||||||||||||||||| |
|
|
| T |
25530614 |
ttttggttgcaaaatagtaagcagcg--gttaggattcttcgaatccc |
25530659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 25535440 - 25535485
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||| ||||||||||| |||||| |||||||||||||||| |
|
|
| T |
25535440 |
ttttggttgcaaaaaagtaagca--gcggttgggattcttcgaatccc |
25535485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0263 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0263
Description:
Target: scaffold0263; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 15800 - 15870
Alignment:
| Q |
28 |
atttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||| || |||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| |
|
|
| T |
15800 |
atttgcaacagagcaagttacctgtttttggttgcggaaaagtaagca--gcggttagtattcttcgaatccc |
15870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 21449252 - 21449314
Alignment:
| Q |
49 |
ctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
21449252 |
ctgtttttggatgcagaaaagtaagcagcg--gttaggattcttcgaatccctcctgtttatatt |
21449314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 17121444 - 17121378
Alignment:
| Q |
29 |
tttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc |
98 |
Q |
| |
|
|||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17121444 |
tttgcaatagagcaagttacttgtttt-ggttgcagaaaagtaagca--gcggttaggattcttcgaatc |
17121378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 17610193 - 17610118
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||| |||||||| |
|
|
| T |
17610193 |
agagcaagtttacctgtttttggttgcagaaaagtaagca--gcggttaggattctttgaaacccccctttttatatt |
17610118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 12208751 - 12208840
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattat |
115 |
Q |
| |
|
|||| |||| || |||||||||| ||||||||| | | |||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
12208751 |
atctgtttgcaacagagcaagtttacctgttttagct-gcagaaaagtaagcagcg--gttaggattcttcgaatcccccctatttatattat |
12208840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 16916874 - 16916821
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
16916874 |
ttacctgtttttggttgcagaaaagtaagca--gcgggtaggattcttcgaatccc |
16916821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 21334652 - 21334580
Alignment:
| Q |
39 |
agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||| | |||||| |
|
|
| T |
21334652 |
agcaagttacctatttttggttgaagaaaagtaaaca--gcggttaggattcttcgaatcccccctgtctatatt |
21334580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 18736202 - 18736127
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||| ||||||||||||| |||| |||||||||||||||||||| ||| ||||| ||||||||||||||||| |
|
|
| T |
18736202 |
atctgtttgcaatagagcaagtttacctatttttggttgcagaaaagtaggca--gcggtaaggattcttcgaatccc |
18736127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 17359332 - 17359398
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
17359332 |
ttacctgtttttggttgcataaaagtaagatgcg--gttaggattcttcgaatcccctctatttatatt |
17359398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 28008265 - 28008338
Alignment:
| Q |
34 |
aatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
|||||||||| |||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| | ||||||||| |
|
|
| T |
28008265 |
aatagagcaaattacttgtttt-ggttgcagaaaagtaagca--gcggttaggattctttgaatctcccctatttat |
28008338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 15543895 - 15543842
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15543895 |
ttacctgttttttgttgcagaaaagtaagca--acggttaggattcttcgaatccc |
15543842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 21973138 - 21973071
Alignment:
| Q |
41 |
caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| |
|
|
| T |
21973138 |
caagttacctgtttttggttgcagaaaagtaa-cagcggttagaggattcttcgaatccc-cctatttat |
21973071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 9787815 - 9787779
Alignment:
| Q |
37 |
agagcaagttacctgtttttggttgcagaaaagtaag |
73 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9787815 |
agagcaagtgacctgtttttggttgcagaaaagtaag |
9787779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 14781794 - 14781741
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | || || |||||||||||||||||||| |
|
|
| T |
14781794 |
ttacctgtttttggttgcagaaaagtgatca--gcagttaggattcttcgaatccc |
14781741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 13345267 - 13345200
Alignment:
| Q |
43 |
agttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||| |||| |||||||||| ||||| ||||||||| |||||||||| |||||||||||| |
|
|
| T |
13345267 |
agttacctgtttt-ggtttaagaaaagtaaacagcg--gttaggatttttcgaatcccccctatttatatt |
13345200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 16179168 - 16179220
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattc |
90 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16179168 |
agagcaagtttacctatttttggttgcagaaaagtaagca--gcggttaggattc |
16179220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 22623043 - 22623114
Alignment:
| Q |
27 |
tatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||| || |||||||||| ||||||||| ||||||||||||||||||| || ||||||||||||| |||||| |
|
|
| T |
22623043 |
tatttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagca--gctgttaggattcttcaaatccc |
22623114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 9401684 - 9401742
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||||||| || ||||||||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
9401684 |
ttttggttacaaaaaagtaagtagcg--gttaggattcttcgaatcccctctatttatatt |
9401742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 21987922 - 21987889
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcg |
78 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
21987922 |
ttacctgtttttggttgcataaaagtaagcagcg |
21987889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 155183 - 155211
Alignment:
| Q |
41 |
caagttacctgtttttggttgcagaaaag |
69 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
155183 |
caagttacctgtttttggttgcagaaaag |
155211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 22664370 - 22664446
Alignment:
| Q |
37 |
agagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattatt |
116 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||| | |||||||||| |||| |||||| | ||||||| ||||| |
|
|
| T |
22664370 |
agagcaagttacatgtttt-ggttgcagaaaagtaagta--gcggttaggactctttgaatcctccgtatttattttatt |
22664446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 25404019 - 25403974
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattctt |
92 |
Q |
| |
|
|||||||||||||||| |||||||||||| | ||||||||||||||| |
|
|
| T |
25404019 |
ttacctgtttttggttccagaaaagtaagta--gcggttaggattctt |
25403974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 14637030 - 14637104
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| |
|
|
| T |
14637030 |
agagcaagtttacctgtttttggttgcagaaaagtaagca--gcgaataggattcttcgaatccc-cctatttatatt |
14637104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 12183264 - 12183185
Alignment:
| Q |
39 |
agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattattcgacat |
122 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||| || |||||||||||||||||||| |||||||||||| || ||||| |
|
|
| T |
12183264 |
agcaagttacctgtttt-ggttacagaaaagtaagcaacg--gttaggattcttcgaatccc-cctatttatattgttggacat |
12183185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 5624790 - 5624862
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc |
98 |
Q |
| |
|
|||| |||| ||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5624790 |
atctgtttgtaatagagcagtttaccggcttttggttgcagaaaagtaagca--gcggttaggattcttcgaatc |
5624862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 23844414 - 23844327
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| |||||| |||||| ||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||| |||||||| |
|
|
| T |
23844414 |
atctgtttgcaatagaccaagtttacctgtttt-ggttgcataaaagtaagcagcg--gttaggatttttcgaatccctcctgtttatatt |
23844327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 14079379 - 14079320
Alignment:
| Q |
52 |
tttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| ||||||||||| || |||||||||||| |
|
|
| T |
14079379 |
tttttggttacagaaaagtaagcagcg--gttagaattcttcgaattccccctatttatatt |
14079320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 27737638 - 27737549
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattatt |
116 |
Q |
| |
|
|||| |||| || |||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
27737638 |
atctgtttgcaacagagcaagtttacctgtttttg-ttgcaaaaaagtaagcagcg--gttaggattcttcgaat-cctccattttatattatt |
27737549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 20005846 - 20005793
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||| |
|
|
| T |
20005846 |
ttacctgtttttggttgcagaaaggtatgca--gcggttaagattcttcgaatccc |
20005793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 24657389 - 24657344
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
24657389 |
ttttggttgcagaaaagtaagca--gcggttagaattcttcgaatccc |
24657344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 17883776 - 17883737
Alignment:
| Q |
39 |
agcaagttacctgtttttggttgcagaaaagtaagcagcg |
78 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
17883776 |
agcaatttacctgtttttggttggagaaaagtaagcagcg |
17883737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 9838506 - 9838579
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||| || ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
9838506 |
atctgtttgcaaaagagcaagttacccgtttt-ggttgcagaaaagtaagca--atggttaggattcttcaaatccc |
9838579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 11136067 - 11136121
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaa-gtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||| |||| ||||| |||| |||||||||||||||||||| |
|
|
| T |
11136067 |
ttacctgtttttggttgcaaaaaaagtaagaagcg--gttaggattcttcgaatccc |
11136121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 24475234 - 24475292
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||||||| || | |||||||||||||||||| | ||| |||||||| |
|
|
| T |
24475234 |
ttttggttgcagaaaagtaagtagtg--gttaggattcttcgaatctcccctgtttatatt |
24475292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 1635127 - 1635183
Alignment:
| Q |
39 |
agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc |
98 |
Q |
| |
|
|||||||||| |||||| ||||| |||||||||| ||||| |||||||||||||||||| |
|
|
| T |
1635127 |
agcaagttacatgtttt-ggttgtagaaaagtaaacagcg--gttaggattcttcgaatc |
1635183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 19492640 - 19492574
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||| |
|
|
| T |
19492640 |
ttacatgtttttggttgcagaaaagtaagcggcg--gttaggattcttcgaatcccccctgtttatatt |
19492574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 17026272 - 17026219
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
17026272 |
ttacctgtttttggttgcagacaagtaagca--gcggttaggattcttcgaatccc |
17026219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 13909003 - 13909091
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| || |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| | | |||||||| |
|
|
| T |
13909003 |
atctgtttgcaacagagcaagtttacctgtttttggttgcaaaaaagtaagca--gcggttaggattctttgaatcccccttgtttatatt |
13909091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 19562125 - 19562050
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||| || |||||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
19562125 |
atctctttgcaacagagcaagtttacctgtttttggttgcagaaaagtaatca--gcggttagaattcttcgaatccc |
19562050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 24639398 - 24639324
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||| |||||||| ||||||||||| |
|
|
| T |
24639398 |
agagcaagtttacctgttttcggttgcagaaaagtaagca--gtggttaggattctttgaatccct-ctatttatatt |
24639324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 12406648 - 12406578
Alignment:
| Q |
29 |
tttgaaatagagc-aagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||||||| || |||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |
|
|
| T |
12406648 |
tttgcaatagagcgaatttacctgtttttggttgcaggaaagtaaaca--gcggttaggattcttcgaatccc |
12406578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 25121175 - 25121102
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||| || ||||||||||||| ||||| | |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
25121175 |
atctgtttgcaacagagcaagttacccgtttt-gattgcagaaaagtaagcagcg--gttaggattcttcgaatccc |
25121102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 13692618 - 13692557
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatcc |
99 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
13692618 |
agagcaagtttacctgtttttggttgcagaaaagtaagca--gtagttaggattcttcgaatcc |
13692557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 7582446 - 7582534
Alignment:
| Q |
24 |
atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||| |||||| |||||| |||||||||||||||||||||| |||||| | ||||||||||||| ||||||| || |||||||| |
|
|
| T |
7582446 |
atctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagca--gtggttaggattctttgaatcccctctgtttatatt |
7582534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 17337072 - 17336997
Alignment:
| Q |
37 |
agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||| | | ||| ||||||||||||||| | |||||||||| |
|
|
| T |
17337072 |
agagcaagtttacctgtttttggttgcataaaagtaagca--gagattatgattcttcgaatcccccttatttatatt |
17336997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 11935237 - 11935293
Alignment:
| Q |
54 |
tttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatat |
112 |
Q |
| |
|
||||||||||||||||||| ||| | |||||||||||||||||||| |||||||||| |
|
|
| T |
11935237 |
tttggttgcagaaaagtaatcagtg--gttaggattcttcgaatcccctctatttatat |
11935293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 25097992 - 25098044
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatcc |
99 |
Q |
| |
|
||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |
|
|
| T |
25097992 |
ttacctgtttttggttgttgaaaagtatgca--gcggttaggattcttcgaatcc |
25098044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 39735 - 39818
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
|||| |||| || ||||||||||||||||||| ||||||||||||||||||| ||||||| || |||| ||||||| ||||||||| |
|
|
| T |
39735 |
atctgtttgcaacagagcaagttacctgtttt-ggttgcagaaaagtaagca--gcggttatgactctttgaatcccccctatttat |
39818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 20744590 - 20744532
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||||||| ||| |||||||| |
|
|
| T |
20744590 |
ttttggttgtagaaaagtaagcagcg--gttaggattcttcgaatcccacctgtttatatt |
20744532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 34128790 - 34128859
Alignment:
| Q |
29 |
tttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| ||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
34128790 |
tttgcaatagagcaagtttacctgtttt-ggttgcagaaaagtaagca--acggttaggattcttcgaatccc |
34128859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 15690940 - 15691008
Alignment:
| Q |
37 |
agagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
15690940 |
agagcaaattacctgtttt-ggttgcagaaaagtaagcag---tgttaggattcttcgaatccc-cctatttat |
15691008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 17432061 - 17432103
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaat |
97 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
17432061 |
ttttggttgcagaaaagtaagca--gcggttaggattcttcgaat |
17432103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 26121273 - 26121191
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctattt |
108 |
Q |
| |
|
|||| |||| || ||||||||||| || ||||||||| |||||||||||| | | ||||||||||||| ||||||| ||||||| |
|
|
| T |
26121273 |
atctgtttgcaagagagcaagttatctatttttggttacagaaaagtaagta--gtggttaggattctttgaatcccccctattt |
26121191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 20549646 - 20549597
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaa |
96 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
20549646 |
ttacctgtttttggttgcaggcaagtaagca--gcggttaggattcttcgaa |
20549597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 110
Target Start/End: Original strand, 36175298 - 36175366
Alignment:
| Q |
39 |
agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat |
110 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||| |||| |||| ||||||| ||||| ||||||||||| |
|
|
| T |
36175298 |
agcaagttacctgtttt-ggttgtagaaaagtaagaagcg--gttatgattctttgaatctctcctatttat |
36175366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 17315062 - 17314988
Alignment:
| Q |
24 |
atctatttgaaatagagc-aagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| |||| |||||||| |||||||||||||| ||||||| ||||||||||| ||||||| ||||||| ||||||| |
|
|
| T |
17315062 |
atctttttgcaatagagcgaagttacctgtttt-ggttgcaaaaaagtaagca--gcggttaagattctttgaatccc |
17314988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 20564020 - 20563969
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc |
98 |
Q |
| |
|
|||| |||||||||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
20564020 |
ttacttgtttttggttgcagaaaagtaagaa--gcagttaggattcttcgaatc |
20563969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 24245464 - 24245407
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
|||| |||||||||||||||||| || |||||||||||||||||||| ||| |||||||| |
|
|
| T |
24245464 |
ttttagttgcagaaaagtaagcaacg--gttaggattcttcgaatccc-cctgtttatatt |
24245407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 16523731 - 16523678
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||||||||| ||| ||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
16523731 |
ttacctgttttttgttatagaaaagtaagca--gcggttaggattctttgaatccc |
16523678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 18937897 - 18937945
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaa |
72 |
Q |
| |
|
|||| |||| || |||||||||||| |||||||||||||||||| |||| |
|
|
| T |
18937897 |
atctgtttgcaacagagcaagttacatgtttttggttgcagaaatgtaa |
18937945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 20858851 - 20858896
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
20858851 |
ttttggttgcataaaagtaagca--gcggttaggattcgtcgaatccc |
20858896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0671 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0671
Description:
Target: scaffold0671; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 609 - 654
Alignment:
| Q |
53 |
ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
609 |
ttttggttgcagaaaagtaagca--gcggttaggattcttcgaatccc |
654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 70066 - 70129
Alignment:
| Q |
29 |
tttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttc |
93 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||| |
|
|
| T |
70066 |
tttgcaatagagcaagtttacctgtttttggttgtagaaaagtaagca--gcagttaggattcttc |
70129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0957 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0957
Description:
Target: scaffold0957; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 3299 - 3348
Alignment:
| Q |
29 |
tttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcg |
78 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
3299 |
tttgtaatagagcaatttacctgtttttggttatagaaaagtaagcagcg |
3348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0638 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0638
Description:
Target: scaffold0638; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 750 - 684
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt |
113 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||| ||||||||||| ||| || |||||||| |
|
|
| T |
750 |
ttacctgtttttggttgcagaaaagtaagaa--gcggttaagattcttcgaaccccctctgtttatatt |
684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0056
Description:
Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 25125 - 25198
Alignment:
| Q |
25 |
tctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||||| || |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
25125 |
tctatttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagca--acggttaggattcttcaaatccc |
25198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 76575 - 76628
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |
|
|
| T |
76575 |
ttacctgtttttggttgtagaaaagtaagca--ccgattaggattcttcgaatccc |
76628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1869 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1869
Description:
Target: scaffold1869; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 328 - 264
Alignment:
| Q |
34 |
aatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||| |||||| || |||||||||||||||||||| |
|
|
| T |
328 |
aatagagcaagtaacctgtttttggttttagaaatataagca--gccgttaggattcttcgaatccc |
264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:
Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 35703 - 35761
Alignment:
| Q |
39 |
agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||| |||||| |
|
|
| T |
35703 |
agcaagttacctgtttt-ggttgcagaaaggtaagca--gcggttaagattcttcaaatccc |
35761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0386 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0386
Description:
Target: scaffold0386; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 6643 - 6590
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||| ||||||||||| || ||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
6643 |
ttacttgtttttggtttcaaaaaagtaagca--gcggtcaggattcttcgaatccc |
6590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0111 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0111
Description:
Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 3805 - 3858
Alignment:
| Q |
45 |
ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc |
100 |
Q |
| |
|
|||||| |||||| |||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
3805 |
ttacctatttttgtttgcagaaaagtaagc--tgcggttaggattcttccaatccc |
3858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0062 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0062
Description:
Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 43176 - 43132
Alignment:
| Q |
24 |
atctatttgaaatagagcaagttacctgtttttggttgcagaaaa |
68 |
Q |
| |
|
|||| |||| || |||||||||||||||||||||||| ||||||| |
|
|
| T |
43176 |
atctgtttgcaacagagcaagttacctgtttttggttacagaaaa |
43132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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