View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1364-INSERTION-1 (Length: 126)
Name: NF1364-INSERTION-1
Description: NF1364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1364-INSERTION-1 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 101; Significance: 2e-50; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 4191771 - 4191887
Alignment:
| Q |
10 |
tttcttctaatcattcaaagctattaaattttaatcaaacaacacttcctttatctcgtatggctttcaacaacaacaatatcaaaactcataaacacat |
109 |
Q |
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| T |
4191771 |
tttcttctaatcattcaaagctaagaaattttaatcaaacaacacttcctttatctcgtatggctttcaataacaacaatatcaaaactcatgaacacat |
4191870 |
T |
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| Q |
110 |
caatgttgttcctccaa |
126 |
Q |
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| T |
4191871 |
caatgttgttcctccaa |
4191887 |
T |
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Target: chr7; HSP #2
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 4191425 - 4191510
Alignment:
| Q |
10 |
tttcttctaatcattcaaagctattaaattttaatcaaacaacacttcctttatctcgtatggctttcaacaacaacaatatcaaaa |
96 |
Q |
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| T |
4191425 |
tttcttctaatcattcaaagcttagaaatttaattcaaacaacacttc-tttatctcatatggctttcaacaacaaaaatatcaaaa |
4191510 |
T |
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