View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13640_low_13 (Length: 208)
Name: NF13640_low_13
Description: NF13640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13640_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 39185015 - 39185182
Alignment:
| Q |
21 |
aaccagtaccaaacctgaaagcatgtgagacacccagagnnnnnnngtcgatatatacccaaaaccgccaaaa---aaccaagcaaccagcaccactacc |
117 |
Q |
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| T |
39185015 |
aaccagtaccgaacgtgaaagcacgtgagacacccagagaaaaaa-gtcgatatatacctaaaaccacaaaaaaaaaaccaagcaaccagcaccactacc |
39185113 |
T |
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| Q |
118 |
caccgtgtatggccgtcggaaagctggtgacaacaccaccaaacagtaacacaaaaacttaaacaaccc |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39185114 |
caccgtgtatggccgtcggaaagctggtgacaacaccaccaaacagtaacacaaaaacttaaacaaccc |
39185182 |
T |
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