View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13643_high_6 (Length: 245)

Name: NF13643_high_6
Description: NF13643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13643_high_6
NF13643_high_6
[»] chr5 (63 HSPs)
chr5 (94-229)||(21191005-21191140)
chr5 (1-239)||(17176898-17177117)
chr5 (94-217)||(21576694-21576817)
chr5 (96-202)||(42893362-42893468)
chr5 (94-218)||(31084309-31084438)
chr5 (94-194)||(43564891-43564991)
chr5 (94-220)||(39698525-39698662)
chr5 (140-217)||(6247609-6247686)
chr5 (141-229)||(24906297-24906385)
chr5 (98-198)||(27932241-27932341)
chr5 (94-220)||(43001784-43001915)
chr5 (97-229)||(15382452-15382592)
chr5 (94-229)||(21522725-21522871)
chr5 (94-229)||(21533291-21533437)
chr5 (142-220)||(8420011-8420089)
chr5 (150-220)||(14674253-14674323)
chr5 (145-229)||(13287399-13287483)
chr5 (139-215)||(33178014-33178090)
chr5 (145-228)||(37328844-37328927)
chr5 (94-219)||(3966488-3966624)
chr5 (94-197)||(4105264-4105369)
chr5 (94-156)||(39268547-39268609)
chr5 (145-202)||(7677707-7677764)
chr5 (109-198)||(30502352-30502441)
chr5 (109-198)||(30542695-30542784)
chr5 (145-229)||(21542005-21542089)
chr5 (96-196)||(28588625-28588725)
chr5 (145-220)||(10298553-10298628)
chr5 (140-202)||(15883989-15884052)
chr5 (145-220)||(19579685-19579760)
chr5 (94-156)||(18592132-18592194)
chr5 (95-196)||(23015934-23016040)
chr5 (140-229)||(6326292-6326381)
chr5 (94-194)||(14873527-14873632)
chr5 (146-219)||(21351906-21351979)
chr5 (146-202)||(30135315-30135372)
chr5 (145-202)||(41633737-41633794)
chr5 (94-198)||(21194072-21194176)
chr5 (141-220)||(16203791-16203870)
chr5 (98-229)||(26312744-26312875)
chr5 (97-196)||(32630687-32630786)
chr5 (149-199)||(7218271-7218321)
chr5 (152-202)||(15405062-15405112)
chr5 (94-156)||(21542089-21542151)
chr5 (97-218)||(30183535-30183667)
chr5 (145-218)||(2436908-2436981)
chr5 (171-228)||(19552569-19552626)
chr5 (160-229)||(22013389-22013458)
chr5 (94-134)||(17088361-17088401)
chr5 (146-229)||(36642763-36642846)
chr5 (148-218)||(41995457-41995525)
chr5 (94-128)||(6326262-6326296)
chr5 (97-151)||(36642704-36642757)
chr5 (145-202)||(5894833-5894890)
chr5 (145-198)||(6471889-6471942)
chr5 (141-190)||(10010568-10010617)
chr5 (145-218)||(11685925-11685998)
chr5 (121-198)||(23012384-23012461)
chr5 (152-217)||(38464371-38464436)
chr5 (140-196)||(2548395-2548451)
chr5 (98-217)||(7997119-7997238)
chr5 (98-150)||(19579766-19579818)
chr5 (145-197)||(40131628-40131680)
[»] chr4 (61 HSPs)
chr4 (94-229)||(23292935-23293070)
chr4 (97-218)||(21945489-21945610)
chr4 (96-229)||(49431000-49431134)
chr4 (96-199)||(28964199-28964302)
chr4 (98-196)||(12895227-12895325)
chr4 (94-218)||(3947710-3947839)
chr4 (94-198)||(8423667-8423771)
chr4 (115-198)||(29205450-29205533)
chr4 (94-229)||(35157934-35158069)
chr4 (102-226)||(12797295-12797418)
chr4 (128-202)||(54580006-54580080)
chr4 (97-202)||(4157152-4157256)
chr4 (117-202)||(38846984-38847069)
chr4 (94-202)||(715554-715665)
chr4 (94-202)||(752880-752991)
chr4 (94-202)||(2361924-2362032)
chr4 (97-185)||(4157455-4157543)
chr4 (96-219)||(16073380-16073502)
chr4 (94-239)||(36635289-36635440)
chr4 (145-218)||(11596352-11596425)
chr4 (109-202)||(34306768-34306860)
chr4 (94-202)||(42640528-42640634)
chr4 (145-201)||(12895116-12895172)
chr4 (145-220)||(30298930-30299006)
chr4 (145-220)||(30327798-30327874)
chr4 (145-239)||(19482633-19482727)
chr4 (94-229)||(28084496-28084634)
chr4 (94-184)||(35161056-35161146)
chr4 (102-229)||(40481612-40481743)
chr4 (109-195)||(9996849-9996935)
chr4 (147-196)||(6485613-6485662)
chr4 (100-156)||(15724498-15724554)
chr4 (146-202)||(24613702-24613758)
chr4 (104-196)||(40179595-40179687)
chr4 (140-190)||(6879460-6879510)
chr4 (94-156)||(30982816-30982878)
chr4 (97-202)||(4672037-4672142)
chr4 (109-202)||(31800442-31800535)
chr4 (153-202)||(51701260-51701309)
chr4 (146-198)||(847957-848009)
chr4 (153-229)||(11651142-11651218)
chr4 (140-184)||(13117449-13117493)
chr4 (158-202)||(14465088-14465132)
chr4 (145-229)||(16303266-16303350)
chr4 (123-190)||(13307891-13307958)
chr4 (148-218)||(24543967-24544038)
chr4 (182-229)||(28720851-28720898)
chr4 (96-186)||(482194-482279)
chr4 (144-198)||(15029771-15029825)
chr4 (177-218)||(12628617-12628658)
chr4 (140-169)||(30094064-30094093)
chr4 (145-198)||(30982878-30982931)
chr4 (153-198)||(37203270-37203315)
chr4 (146-199)||(47263991-47264044)
chr4 (160-220)||(903906-903966)
chr4 (145-197)||(4383375-4383426)
chr4 (145-229)||(5414172-5414256)
chr4 (145-236)||(12708114-12708206)
chr4 (151-229)||(20633460-20633535)
chr4 (153-229)||(27706185-27706261)
chr4 (145-202)||(50280883-50280942)
[»] chr1 (91 HSPs)
chr1 (94-220)||(42359398-42359524)
chr1 (94-220)||(37598816-37598941)
chr1 (94-220)||(46348332-46348458)
chr1 (94-195)||(18337338-18337439)
chr1 (94-202)||(22515836-22515944)
chr1 (98-202)||(18190061-18190165)
chr1 (96-196)||(40258884-40258984)
chr1 (97-202)||(1486656-1486766)
chr1 (100-202)||(38078616-38078718)
chr1 (94-229)||(5927289-5927424)
chr1 (94-236)||(16297230-16297374)
chr1 (99-198)||(40181877-40181976)
chr1 (94-220)||(1815241-1815367)
chr1 (100-212)||(51410016-51410129)
chr1 (140-236)||(9709788-9709884)
chr1 (94-198)||(5898215-5898319)
chr1 (94-202)||(18471300-18471405)
chr1 (150-229)||(48450592-48450671)
chr1 (140-218)||(22881611-22881689)
chr1 (140-219)||(31672890-31672969)
chr1 (98-236)||(5944249-5944400)
chr1 (145-202)||(113301-113358)
chr1 (96-229)||(2896072-2896205)
chr1 (140-229)||(9103615-9103703)
chr1 (136-228)||(13011206-13011299)
chr1 (145-202)||(24577186-24577243)
chr1 (94-229)||(40917726-40917870)
chr1 (145-229)||(6612171-6612255)
chr1 (96-202)||(1704946-1705049)
chr1 (140-202)||(19058851-19058913)
chr1 (140-218)||(35702583-35702661)
chr1 (160-229)||(398780-398849)
chr1 (146-219)||(28273089-28273162)
chr1 (150-227)||(31015020-31015097)
chr1 (145-229)||(6427325-6427409)
chr1 (145-229)||(47989473-47989556)
chr1 (94-196)||(52903257-52903356)
chr1 (94-229)||(10577684-10577819)
chr1 (145-220)||(18556456-18556531)
chr1 (147-202)||(21378580-21378635)
chr1 (147-202)||(32434718-32434773)
chr1 (147-218)||(32461465-32461536)
chr1 (94-218)||(36878447-36878576)
chr1 (94-156)||(31694648-31694710)
chr1 (140-198)||(41877465-41877523)
chr1 (98-198)||(38075922-38076023)
chr1 (145-229)||(5376500-5376584)
chr1 (94-186)||(26830606-26830697)
chr1 (96-184)||(30749860-30749948)
chr1 (96-184)||(30771311-30771399)
chr1 (109-193)||(43492458-43492542)
chr1 (160-239)||(16927200-16927279)
chr1 (145-202)||(17778551-17778605)
chr1 (140-202)||(1864875-1864937)
chr1 (94-218)||(6427447-6427585)
chr1 (94-156)||(9828103-9828165)
chr1 (145-202)||(6332673-6332729)
chr1 (152-229)||(14359529-14359605)
chr1 (97-229)||(15323138-15323275)
chr1 (145-199)||(31694710-31694766)
chr1 (94-134)||(25452115-25452155)
chr1 (94-134)||(29144329-29144369)
chr1 (98-134)||(46940761-46940797)
chr1 (97-156)||(19562567-19562626)
chr1 (147-202)||(23738680-23738735)
chr1 (140-202)||(24334700-24334763)
chr1 (140-218)||(25452145-25452221)
chr1 (109-184)||(29163345-29163420)
chr1 (96-218)||(17831473-17831604)
chr1 (140-186)||(21620973-21621019)
chr1 (94-156)||(32461402-32461464)
chr1 (160-229)||(1262859-1262928)
chr1 (145-194)||(2283676-2283725)
chr1 (97-218)||(8842666-8842787)
chr1 (145-198)||(9629900-9629953)
chr1 (161-202)||(12443476-12443517)
chr1 (140-197)||(14332637-14332694)
chr1 (163-236)||(15641048-15641121)
chr1 (169-198)||(23705490-23705519)
chr1 (145-202)||(25272484-25272541)
chr1 (145-186)||(28663626-28663667)
chr1 (145-194)||(44482240-44482289)
chr1 (149-229)||(48040465-48040546)
chr1 (145-197)||(7918211-7918263)
chr1 (145-197)||(9828051-9828103)
chr1 (164-228)||(21366039-21366103)
chr1 (124-196)||(21530697-21530769)
chr1 (94-156)||(25361945-25362003)
chr1 (146-198)||(27471567-27471619)
chr1 (138-198)||(39953139-39953199)
chr1 (94-134)||(48040423-48040463)
[»] chr6 (85 HSPs)
chr6 (94-229)||(34595109-34595244)
chr6 (94-220)||(17841538-17841664)
chr6 (109-229)||(7977794-7977914)
chr6 (98-220)||(28152083-28152204)
chr6 (94-229)||(8776917-8777057)
chr6 (98-198)||(28715301-28715401)
chr6 (94-221)||(7265542-7265669)
chr6 (94-229)||(9107308-9107454)
chr6 (94-229)||(16766672-16766818)
chr6 (140-229)||(426509-426598)
chr6 (94-202)||(4877944-4878052)
chr6 (94-202)||(32978848-32978957)
chr6 (94-229)||(9658854-9658990)
chr6 (145-229)||(10770674-10770758)
chr6 (97-229)||(16833283-16833415)
chr6 (97-229)||(12696299-12696436)
chr6 (109-229)||(853823-853943)
chr6 (123-202)||(1191678-1191757)
chr6 (94-217)||(31959146-31959260)
chr6 (97-218)||(24645466-24645588)
chr6 (109-198)||(33001253-33001342)
chr6 (94-198)||(7377985-7378089)
chr6 (145-229)||(8365519-8365603)
chr6 (94-198)||(32511615-32511719)
chr6 (98-228)||(3398595-3398729)
chr6 (98-197)||(6898234-6898333)
chr6 (98-220)||(7930289-7930407)
chr6 (140-229)||(7938091-7938180)
chr6 (97-167)||(1315969-1316039)
chr6 (94-156)||(7248417-7248479)
chr6 (144-202)||(7801155-7801213)
chr6 (94-197)||(31384927-31385040)
chr6 (124-229)||(23771554-23771658)
chr6 (140-196)||(403859-403915)
chr6 (109-218)||(12868640-12868748)
chr6 (146-202)||(15489733-15489789)
chr6 (145-229)||(34073347-34073431)
chr6 (94-193)||(13360322-13360420)
chr6 (147-197)||(9522898-9522948)
chr6 (145-202)||(9911528-9911586)
chr6 (145-202)||(5970108-5970165)
chr6 (104-197)||(12627536-12627629)
chr6 (98-215)||(32298560-32298677)
chr6 (145-229)||(9027153-9027237)
chr6 (151-202)||(1681760-1681811)
chr6 (144-202)||(3209383-3209442)
chr6 (140-215)||(19040341-19040416)
chr6 (140-194)||(1700362-1700416)
chr6 (145-219)||(7996378-7996452)
chr6 (145-219)||(8022349-8022423)
chr6 (94-198)||(9025454-9025547)
chr6 (96-150)||(9629448-9629502)
chr6 (94-156)||(10339063-10339125)
chr6 (145-219)||(21395308-21395381)
chr6 (140-229)||(5732505-5732594)
chr6 (144-229)||(9629358-9629443)
chr6 (94-150)||(17327599-17327655)
chr6 (153-196)||(4118341-4118384)
chr6 (153-196)||(6349745-6349788)
chr6 (145-196)||(9617442-9617493)
chr6 (109-156)||(10827508-10827555)
chr6 (107-174)||(12690446-12690513)
chr6 (152-202)||(17302558-17302609)
chr6 (152-227)||(17341671-17341746)
chr6 (155-202)||(25010212-25010259)
chr6 (104-215)||(34172182-34172288)
chr6 (151-197)||(2117083-2117129)
chr6 (147-229)||(7086770-7086852)
chr6 (94-155)||(8389417-8389478)
chr6 (145-202)||(8713981-8714039)
chr6 (140-174)||(16388212-16388246)
chr6 (153-199)||(17435204-17435250)
chr6 (140-198)||(21924930-21924988)
chr6 (140-186)||(26402675-26402721)
chr6 (140-229)||(31579222-31579309)
chr6 (143-196)||(6327516-6327569)
chr6 (141-190)||(6751878-6751927)
chr6 (94-147)||(8365457-8365510)
chr6 (130-198)||(30851608-30851674)
chr6 (146-218)||(31429004-31429076)
chr6 (160-196)||(5462694-5462730)
chr6 (145-197)||(7151419-7151471)
chr6 (145-229)||(10294082-10294166)
chr6 (140-228)||(13851712-13851800)
chr6 (150-198)||(30866149-30866197)
[»] scaffold0652 (1 HSPs)
scaffold0652 (94-220)||(411-537)
[»] chr3 (77 HSPs)
chr3 (94-226)||(55401053-55401185)
chr3 (100-217)||(10954939-10955056)
chr3 (96-229)||(28917976-28918111)
chr3 (94-218)||(20503451-20503575)
chr3 (98-219)||(25775493-25775613)
chr3 (95-229)||(26492155-26492289)
chr3 (98-239)||(7171467-7171607)
chr3 (94-217)||(4987229-4987363)
chr3 (96-198)||(40993286-40993389)
chr3 (97-198)||(11251984-11252083)
chr3 (94-228)||(15999959-16000099)
chr3 (94-202)||(27505248-27505361)
chr3 (94-229)||(24204990-24205125)
chr3 (94-202)||(51206302-51206410)
chr3 (144-218)||(21479104-21479178)
chr3 (94-198)||(34185061-34185176)
chr3 (141-229)||(8587017-8587105)
chr3 (145-212)||(49651786-49651853)
chr3 (148-202)||(26508112-26508166)
chr3 (145-202)||(1509541-1509598)
chr3 (140-229)||(8383232-8383321)
chr3 (145-218)||(14829676-14829748)
chr3 (109-229)||(15796247-15796378)
chr3 (140-219)||(10268481-10268560)
chr3 (94-197)||(18426956-18427059)
chr3 (124-239)||(25093467-25093582)
chr3 (145-220)||(25948887-25948962)
chr3 (140-198)||(7928456-7928514)
chr3 (104-202)||(24633360-24633458)
chr3 (144-229)||(10335285-10335370)
chr3 (149-202)||(21256990-21257043)
chr3 (145-202)||(34910319-34910376)
chr3 (140-229)||(35994734-35994821)
chr3 (145-201)||(14832102-14832158)
chr3 (145-229)||(41961650-41961734)
chr3 (94-194)||(8789497-8789599)
chr3 (94-196)||(4466549-4466651)
chr3 (141-202)||(8593138-8593200)
chr3 (94-184)||(35222958-35223048)
chr3 (96-202)||(3163982-3164082)
chr3 (145-202)||(14209115-14209172)
chr3 (145-202)||(28812517-28812574)
chr3 (152-236)||(11610489-11610573)
chr3 (145-229)||(14216867-14216951)
chr3 (145-229)||(14222996-14223080)
chr3 (94-180)||(3631708-3631794)
chr3 (94-184)||(13845474-13845564)
chr3 (145-218)||(14747547-14747621)
chr3 (140-220)||(32400703-32400780)
chr3 (168-218)||(40052318-40052368)
chr3 (145-202)||(750618-750675)
chr3 (161-202)||(14979183-14979224)
chr3 (160-229)||(23915934-23916003)
chr3 (120-196)||(28576724-28576801)
chr3 (94-202)||(33359763-33359865)
chr3 (122-198)||(45451559-45451635)
chr3 (125-184)||(2941578-2941637)
chr3 (129-188)||(3865690-3865749)
chr3 (145-228)||(4990967-4991050)
chr3 (145-196)||(39756244-39756295)
chr3 (147-202)||(55212965-55213020)
chr3 (145-207)||(1550137-1550199)
chr3 (116-190)||(14338454-14338528)
chr3 (147-197)||(17005621-17005671)
chr3 (144-198)||(38731224-38731278)
chr3 (140-198)||(49505149-49505207)
chr3 (145-198)||(11665950-11666003)
chr3 (94-194)||(23657748-23657849)
chr3 (94-147)||(41961588-41961641)
chr3 (94-134)||(1509637-1509677)
chr3 (176-220)||(3865587-3865631)
chr3 (145-213)||(8039835-8039903)
chr3 (145-229)||(9800015-9800099)
chr3 (176-220)||(10318065-10318109)
chr3 (97-196)||(21149075-21149174)
chr3 (94-227)||(32804493-32804622)
chr3 (98-134)||(40052382-40052418)
[»] chr2 (70 HSPs)
chr2 (94-202)||(2438668-2438776)
chr2 (94-218)||(38117108-38117232)
chr2 (94-220)||(37558961-37559087)
chr2 (94-201)||(5040735-5040844)
chr2 (94-239)||(15972838-15972983)
chr2 (94-229)||(18840962-18841097)
chr2 (109-229)||(30404814-30404934)
chr2 (97-229)||(14996171-14996308)
chr2 (98-213)||(12224212-12224329)
chr2 (140-229)||(19536392-19536482)
chr2 (145-229)||(20539674-20539758)
chr2 (94-228)||(21624242-21624372)
chr2 (94-229)||(28596447-28596579)
chr2 (94-220)||(37419727-37419864)
chr2 (140-236)||(18421931-18422027)
chr2 (97-229)||(20242679-20242811)
chr2 (145-225)||(30717530-30717610)
chr2 (123-226)||(6940233-6940336)
chr2 (98-220)||(34993935-34994051)
chr2 (99-214)||(37411198-37411313)
chr2 (140-218)||(20473308-20473386)
chr2 (109-197)||(5367199-5367287)
chr2 (146-202)||(11223864-11223920)
chr2 (145-229)||(15657839-15657923)
chr2 (152-220)||(21374706-21374774)
chr2 (96-155)||(19942314-19942373)
chr2 (140-202)||(18255975-18256037)
chr2 (94-156)||(35056927-35056989)
chr2 (94-156)||(44860379-44860441)
chr2 (145-202)||(974749-974806)
chr2 (145-229)||(23058442-23058527)
chr2 (94-155)||(26769571-26769632)
chr2 (145-197)||(12668423-12668475)
chr2 (147-215)||(18420436-18420504)
chr2 (145-229)||(30335392-30335476)
chr2 (94-150)||(42511331-42511387)
chr2 (153-220)||(24894373-24894440)
chr2 (140-219)||(31018575-31018654)
chr2 (151-229)||(12940941-12941019)
chr2 (140-198)||(34691800-34691858)
chr2 (140-198)||(34714212-34714270)
chr2 (145-235)||(36756344-36756434)
chr2 (140-218)||(43586000-43586078)
chr2 (160-229)||(21616737-21616806)
chr2 (94-202)||(24009298-24009405)
chr2 (145-197)||(33153431-33153483)
chr2 (94-196)||(34006939-34007042)
chr2 (94-220)||(21091707-21091833)
chr2 (143-229)||(23718001-23718087)
chr2 (143-229)||(24105673-24105759)
chr2 (97-155)||(27084318-27084376)
chr2 (160-198)||(28677915-28677953)
chr2 (140-202)||(29176488-29176550)
chr2 (150-220)||(34221502-34221572)
chr2 (145-203)||(38442308-38442366)
chr2 (152-198)||(39323270-39323316)
chr2 (145-198)||(4882696-4882749)
chr2 (160-217)||(21782833-21782890)
chr2 (160-229)||(28412325-28412394)
chr2 (160-217)||(35449500-35449557)
chr2 (160-229)||(36409642-36409711)
chr2 (147-196)||(44605141-44605190)
chr2 (145-198)||(44860326-44860379)
chr2 (140-196)||(5473336-5473392)
chr2 (94-154)||(17776648-17776708)
chr2 (146-218)||(18276507-18276579)
chr2 (96-174)||(27460067-27460142)
chr2 (96-156)||(28524485-28524545)
chr2 (146-226)||(34337182-34337257)
chr2 (146-198)||(42832277-42832329)
[»] chr7 (66 HSPs)
chr7 (94-236)||(13770659-13770806)
chr7 (98-229)||(24105653-24105784)
chr7 (94-219)||(15680794-15680919)
chr7 (94-201)||(5409780-5409892)
chr7 (94-236)||(25481870-25482012)
chr7 (94-202)||(9778502-9778615)
chr7 (97-235)||(21864775-21864915)
chr7 (94-198)||(21880158-21880262)
chr7 (94-229)||(43027413-43027553)
chr7 (121-202)||(7197273-7197354)
chr7 (105-198)||(42720850-42720943)
chr7 (94-229)||(24339617-24339763)
chr7 (97-229)||(26733279-26733411)
chr7 (146-217)||(7438693-7438764)
chr7 (98-217)||(32093967-32094093)
chr7 (109-202)||(8234148-8234241)
chr7 (94-198)||(598214-598318)
chr7 (140-236)||(11061071-11061167)
chr7 (94-198)||(20549797-20549901)
chr7 (94-198)||(32287412-32287516)
chr7 (94-195)||(40287311-40287406)
chr7 (145-229)||(27945016-27945100)
chr7 (149-200)||(26033465-26033516)
chr7 (98-229)||(33994187-33994318)
chr7 (145-202)||(3991326-3991383)
chr7 (94-200)||(18215146-18215241)
chr7 (96-198)||(1401031-1401131)
chr7 (145-196)||(9408334-9408385)
chr7 (140-198)||(19213809-19213867)
chr7 (140-198)||(28155576-28155634)
chr7 (145-202)||(19992003-19992060)
chr7 (145-196)||(18039006-18039058)
chr7 (94-228)||(1433430-1433569)
chr7 (98-197)||(5835254-5835353)
chr7 (146-229)||(19206025-19206108)
chr7 (145-218)||(21560484-21560562)
chr7 (96-198)||(27093364-27093466)
chr7 (96-198)||(27184835-27184937)
chr7 (145-202)||(25822657-25822714)
chr7 (145-202)||(35861966-35862023)
chr7 (145-197)||(7058433-7058485)
chr7 (142-194)||(9482944-9482996)
chr7 (145-194)||(11272586-11272637)
chr7 (146-202)||(11665441-11665497)
chr7 (94-134)||(43250074-43250114)
chr7 (146-190)||(48438560-48438604)
chr7 (146-197)||(13300417-13300468)
chr7 (145-196)||(2334256-2334309)
chr7 (140-198)||(3721099-3721157)
chr7 (138-196)||(4909159-4909217)
chr7 (147-229)||(15902797-15902879)
chr7 (94-148)||(17852056-17852110)
chr7 (145-219)||(21930614-21930687)
chr7 (161-219)||(32308105-32308163)
chr7 (145-190)||(1885587-1885632)
chr7 (98-196)||(7973076-7973176)
chr7 (94-155)||(11665378-11665439)
chr7 (139-196)||(38143231-38143288)
chr7 (94-150)||(2334314-2334370)
chr7 (94-134)||(6490786-6490826)
chr7 (169-229)||(11722122-11722182)
chr7 (109-153)||(11831494-11831538)
chr7 (94-134)||(14729773-14729813)
chr7 (140-220)||(23191880-23191960)
chr7 (140-184)||(25956465-25956509)
chr7 (94-134)||(30813867-30813907)
[»] scaffold0053 (1 HSPs)
scaffold0053 (94-229)||(8773-8908)
[»] chr8 (68 HSPs)
chr8 (97-220)||(36450706-36450829)
chr8 (94-220)||(5813576-5813702)
chr8 (94-229)||(22651951-22652097)
chr8 (94-195)||(40332200-40332301)
chr8 (94-218)||(18407705-18407829)
chr8 (94-229)||(29510242-29510388)
chr8 (94-229)||(926737-926872)
chr8 (122-229)||(20873044-20873151)
chr8 (97-199)||(8342977-8343074)
chr8 (96-218)||(20679346-20679468)
chr8 (94-197)||(14134706-14134809)
chr8 (145-219)||(13436964-13437038)
chr8 (140-197)||(4948659-4948716)
chr8 (145-202)||(25566843-25566900)
chr8 (94-198)||(3025557-3025661)
chr8 (96-216)||(31556985-31557104)
chr8 (146-236)||(4673426-4673516)
chr8 (96-217)||(41831886-41832012)
chr8 (128-217)||(22595981-22596070)
chr8 (94-229)||(22197680-22197826)
chr8 (143-219)||(30077385-30077461)
chr8 (145-220)||(15816129-15816204)
chr8 (94-229)||(126296-126433)
chr8 (141-227)||(18170478-18170564)
chr8 (141-227)||(18634046-18634132)
chr8 (140-202)||(24613523-24613584)
chr8 (145-202)||(2572056-2572113)
chr8 (94-186)||(3951485-3951577)
chr8 (146-202)||(4298887-4298943)
chr8 (148-236)||(25192350-25192438)
chr8 (97-199)||(8343321-8343434)
chr8 (145-220)||(30271291-30271366)
chr8 (96-174)||(15023208-15023286)
chr8 (94-156)||(24205757-24205819)
chr8 (94-229)||(37283764-37283894)
chr8 (94-184)||(43737760-43737850)
chr8 (147-220)||(7442829-7442902)
chr8 (145-202)||(21465414-21465471)
chr8 (98-229)||(24857984-24858122)
chr8 (94-202)||(29447048-29447167)
chr8 (97-197)||(26434187-26434287)
chr8 (94-165)||(4498342-4498413)
chr8 (94-149)||(6065595-6065650)
chr8 (139-198)||(34897091-34897150)
chr8 (140-198)||(13844591-13844649)
chr8 (94-156)||(29447503-29447565)
chr8 (140-198)||(31236572-31236630)
chr8 (94-196)||(33405333-33405435)
chr8 (131-196)||(4786324-4786389)
chr8 (96-136)||(8798804-8798844)
chr8 (97-145)||(22943301-22943349)
chr8 (145-229)||(24669408-24669492)
chr8 (160-228)||(36934646-36934714)
chr8 (153-229)||(41838131-41838207)
chr8 (94-134)||(44067597-44067637)
chr8 (145-196)||(11927086-11927137)
chr8 (94-196)||(16987920-16988023)
chr8 (94-156)||(27067240-27067300)
chr8 (146-228)||(28384995-28385077)
chr8 (94-156)||(34450970-34451032)
chr8 (141-198)||(12606825-12606882)
chr8 (139-196)||(12985400-12985457)
chr8 (97-150)||(16641921-16641974)
chr8 (145-198)||(28745504-28745557)
chr8 (136-196)||(3677794-3677854)
chr8 (94-150)||(21465477-21465533)
chr8 (94-229)||(24413508-24413644)
chr8 (100-156)||(28819250-28819306)
[»] scaffold0050 (1 HSPs)
scaffold0050 (98-202)||(70280-70384)
[»] scaffold0223 (1 HSPs)
scaffold0223 (145-229)||(20147-20231)
[»] scaffold0361 (1 HSPs)
scaffold0361 (109-202)||(14532-14622)
[»] scaffold0027 (1 HSPs)
scaffold0027 (145-236)||(46650-46741)
[»] scaffold0793 (1 HSPs)
scaffold0793 (94-202)||(4830-4941)
[»] scaffold0003 (1 HSPs)
scaffold0003 (94-229)||(241569-241715)
[»] scaffold0103 (1 HSPs)
scaffold0103 (153-220)||(51795-51862)
[»] scaffold0021 (1 HSPs)
scaffold0021 (148-229)||(130457-130538)
[»] scaffold0019 (1 HSPs)
scaffold0019 (97-218)||(71709-71843)
[»] scaffold0018 (2 HSPs)
scaffold0018 (146-229)||(178819-178903)
scaffold0018 (152-229)||(192256-192333)
[»] scaffold0722 (1 HSPs)
scaffold0722 (136-202)||(7023-7089)
[»] scaffold0136 (1 HSPs)
scaffold0136 (145-230)||(3849-3934)
[»] scaffold0009 (2 HSPs)
scaffold0009 (109-186)||(174517-174594)
scaffold0009 (109-186)||(180030-180107)
[»] scaffold0008 (1 HSPs)
scaffold0008 (145-226)||(263372-263453)
[»] scaffold0450 (1 HSPs)
scaffold0450 (94-217)||(8573-8707)
[»] scaffold0306 (1 HSPs)
scaffold0306 (144-220)||(13384-13460)
[»] scaffold0246 (1 HSPs)
scaffold0246 (102-229)||(19551-19682)
[»] scaffold0152 (1 HSPs)
scaffold0152 (144-220)||(21867-21943)
[»] scaffold0022 (1 HSPs)
scaffold0022 (109-229)||(90818-90938)
[»] scaffold0011 (1 HSPs)
scaffold0011 (146-202)||(17750-17806)
[»] scaffold0004 (3 HSPs)
scaffold0004 (146-217)||(123612-123686)
scaffold0004 (152-220)||(92791-92859)
scaffold0004 (94-151)||(92875-92932)
[»] scaffold0512 (1 HSPs)
scaffold0512 (97-167)||(4988-5058)
[»] scaffold0086 (1 HSPs)
scaffold0086 (94-156)||(2987-3049)
[»] scaffold0025 (1 HSPs)
scaffold0025 (145-202)||(23771-23829)
[»] scaffold0122 (1 HSPs)
scaffold0122 (109-202)||(8012-8104)
[»] scaffold0083 (1 HSPs)
scaffold0083 (109-174)||(45494-45559)
[»] scaffold0171 (1 HSPs)
scaffold0171 (145-229)||(23395-23479)
[»] scaffold0007 (1 HSPs)
scaffold0007 (94-229)||(225206-225352)
[»] scaffold0475 (1 HSPs)
scaffold0475 (94-176)||(3336-3418)
[»] scaffold0049 (1 HSPs)
scaffold0049 (140-198)||(63779-63837)
[»] scaffold0066 (1 HSPs)
scaffold0066 (157-202)||(33375-33420)
[»] scaffold0057 (1 HSPs)
scaffold0057 (94-156)||(24083-24146)
[»] scaffold0044 (1 HSPs)
scaffold0044 (148-195)||(53189-53236)
[»] scaffold0020 (1 HSPs)
scaffold0020 (145-198)||(135312-135365)
[»] scaffold0697 (1 HSPs)
scaffold0697 (124-196)||(1652-1724)
[»] scaffold0036 (1 HSPs)
scaffold0036 (145-197)||(9747-9799)


Alignment Details
Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 21191005 - 21191140
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  21191005 acggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 21191104  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||  |||||||||||||||| ||||||||    
T  21191105 ttagctgtgtcggcatgtcagtgtccgtgtcgtgtc 21191140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 17176898 - 17177117
Alignment:
Q  1 aaaaattaatggaatggattctcatacgtttaataaatttttcttnnnnnnnnttgttcaaacaaaaaactataagaaattaatggattcctaacggaca 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  17176898 aaaaattaatggaatggattctcatatgtttaataaatttttcttaaaaaaaattgttcaaacaaaaaactataagaaattaatggattcctaacggaca 17176997  T
Q  101 ctcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctg 200  Q
    || ||   ||||||||||||                   |||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17176998 ctacttagattaggcgtgtt-------------------gtgtctaacaccgacacttgtaattacaatgaattttttgattttttcaaattattagctg 17177078  T
Q  201 tgctggcatgtcagtgtccgagtcgtgtcggatgtctgt 239  Q
    || |||| | |||||||||||||||| || | |||||||    
T  17177079 tgttggcgtatcagtgtccgagtcgtatctggtgtctgt 17177117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 21576694 - 21576817
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||||||||| || ||||| ||||| ||| |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  21576694 acggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaatta 21576793  T
Q  194 ttagctgtgctggcatgtcagtgt 217  Q
    ||||||||| |||| | |||||||    
T  21576794 ttagctgtgttggcgtatcagtgt 21576817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 42893468 - 42893362
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||||||||  ||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  42893468 ggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattatt 42893369  T
Q  196 agctgtg 202  Q
    |||||||    
T  42893368 agctgtg 42893362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 31084438 - 31084309
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac-----cgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||||| ||||||| ||| || ||||||||||| ||| |||||||||||     ||||||||||||||||| |||||| |||||||||||||    
T  31084438 acggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttca 31084339  T
Q  189 aattattagctgtgctggcatgtcagtgtc 218  Q
    ||||||||||||||  ||| ||||||||||    
T  31084338 aattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 43564991 - 43564891
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||| |||| ||||||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||| | |||| |||||||||| |||||||    
T  43564991 acggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaaatta 43564892  T
Q  194 t 194  Q
    |    
T  43564891 t 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 39698662 - 39698525
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac-----------ttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||| |||||||||||  |||||||||| |||||| |||||||||||||||||           ||||||||||| |||||| |||||||    
T  39698662 acggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgatt 39698563  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||||||||||||   || ||||||||||||    
T  39698562 ttttcaaattattagctgtgtcagcgtgtcagtgtccg 39698525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 6247686 - 6247609
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgt 217  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||  ||| |||||||||    
T  6247686 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 24906297 - 24906385
Alignment:
Q  141 tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||| |||| ||||||||| || ||||||||    
T  24906297 tgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtc 24906385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 27932341 - 27932241
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||||||||||||||| | |||||| ||||| ||| |||||||||||| | | ||||||||||| |||||| ||| ||||| ||||||||||||    
T  27932341 acactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattag 27932242  T
Q  198 c 198  Q
    |    
T  27932241 c 27932241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 43001915 - 43001784
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac-----cgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||||| ||||||||||| | |||||  ||||| ||| |||||||||||     | ||||||||||||||| |||||| ||| |||||||||    
T  43001915 acggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaattttttca 43001816  T
Q  189 aattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||| |||  | ||||||||||||||    
T  43001815 aattattagcagtgtcgacatgtcagtgtccg 43001784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 15382592 - 15382452
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtcc------gacaccgacacttgtaattacaatgaattttgtgatttttt--ca 188  Q
    ||||||||||| ||||||||||| |||||||||||||  ||| ||||||      |||||||||||||||||||| | |||||| | |||||||||  ||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattatatgattttttttca 15382493  T
Q  189 aattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||  ||| ||||| |||||| ||||||||    
T  15382492 aattattagctgtgtcggcgtgtcattgtccgtgtcgtgtc 15382452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 21522871 - 21522725
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac-----------ttgtaattacaatgaattttgtgatt 182  Q
    |||||||||| | | ||||||||||| |||||| ||||||| ||| |||||||||||||||||           ||||||||||| |||||| ||| |||    
T  21522871 acggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttatt 21522772  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||| |||||||||||||||  ||| |||||||||||| ||||||||    
T  21522771 ttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 21522725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 21533437 - 21533291
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac-----------ttgtaattacaatgaattttgtgatt 182  Q
    |||||||||| | | ||||||||||| |||||| ||||||| ||| |||||||||||||||||           ||||||||||| |||||| ||| |||    
T  21533437 acggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttatt 21533338  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||| |||||||||||||||  ||| |||||||||||| ||||||||    
T  21533337 ttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 21533291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 8420089 - 8420011
Alignment:
Q  142 gtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| ||  ||| ||||| ||||||    
T  8420089 gtccgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccg 8420011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 14674323 - 14674253
Alignment:
Q  150 ccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||||||  ||| ||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 14674253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 13287399 - 13287483
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||||  | | ||| |||||||| ||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtc 13287483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 33178090 - 33178014
Alignment:
Q  139 tgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagt 215  Q
    ||||||||||||||||||||||||||||| | |||| ||||||||||| |||||||||| ||||  ||| |||||||    
T  33178090 tgtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 37328844 - 37328927
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||||||| ||||||  ||  | |||||||||| |||||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 3966624 - 3966488
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccg-----------acaccgacacttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||| ||||| ||||| ||  ||| ||||||||||||||||||           |||||||||| | |||||||| |||||| |||||||    
T  3966624 acggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgatt 3966525  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    || ||||||||||||| |||  |||||||||||||||    
T  3966524 ttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 4105369 - 4105264
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtga--ttttttcaaat 191  Q
    |||||||||||||| ||||||||||| || || || ||||||| | | ||| || ||| ||||||||||||||| |||||| |||||  |||||||||||    
T  4105369 acggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgatcttttttcaaat 4105270  T
Q  192 tattag 197  Q
    ||||||    
T  4105269 tattag 4105264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 39268547 - 39268609
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||| ||||||||||| || ||||||||||||||| |||||| ||||||||||    
T  39268547 acggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 7677764 - 7677707
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtg 7677707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 30502352 - 30502441
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||| ||| || ||||||||||  ||| ||||||||||||||||| | |||||||| ||||||  |||||||| |||||||||||||    
T  30502352 attaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagc 30502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 30542695 - 30542784
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||| ||| || ||||||||||  ||| ||||||||||||||||| | |||||||| ||||||  |||||||| |||||||||||||    
T  30542695 attaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagc 30542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 21542089 - 21542005
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||| |||||| ||| || |||| |||||||||| ||||  ||||||||| |||| | ||||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtc 21542005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 28588625 - 28588725
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||||| ||| |||| |||||| | |||||| || |  ||| ||||||||||||||||| | |||||||| |||||| ||||||||| ||||||||||    
T  28588625 ggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattatt 28588724  T
Q  196 a 196  Q
    |    
T  28588725 a 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 10298628 - 10298553
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||||||||||||||| || ||| ||||| |||||||||||||||| ||||  ||| ||| ||||||||    
T  10298628 cgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 15884052 - 15883989
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||| ||||||    
T  15884052 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtg 15883989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 19579760 - 19579685
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||||||||||||| || | |||| ||||||||| |||||||||||||||||  ||| | ||||||||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccg 19579685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 18592194 - 18592132
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||| ||||||||| ||||| ||| |||| ||||| |||||||||||||||||||||    
T  18592194 acggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacac 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 23015934 - 23016040
Alignment:
Q  95 cggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccg-----acaccgacacttgtaattacaatgaattttgtgattttttcaa 189  Q
    ||||||||||||| ||||||||||| ||  |||||||||||||| |||||||     ||| |||||| | |||||||| |||||| ||||||||| ||||    
T  23015934 cggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgattttctcaa 23016033  T
Q  190 attatta 196  Q
    || ||||    
T  23016034 atgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 6326292 - 6326381
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||| | |||||||||||||||| |||||| ||| ||||| |||||||| ||||  ||  ||| |||||||||||| ||||||||    
T  6326292 gtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtc 6326381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 14873632 - 14873527
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtcc-----gacaccgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||||| ||||||||||| ||||||| |||||| ||||| ||||     ||||||||||| | |||||||| | |||| |||| |||| |||    
T  14873632 acggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtgcttttctca 14873533  T
Q  189 aattat 194  Q
    ||||||    
T  14873532 aattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 21351906 - 21351979
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    |||||||||||||||||||||| |||||| ||||| |||||| ||||||||| ||||  ||  |||||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 30135372 - 30135315
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtg 30135315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 41633794 - 41633737
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||| ||||||||||| |||||| ||| | |||||||||||||||||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtg 41633737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 21194072 - 21194176
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||||||||  |||||||| ||||  ||| |||||| ||||| | || | |||||||| |||||  ||||||||| ||||||||    
T  21194072 acggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgattttctcaaatta 21194171  T
Q  194 ttagc 198  Q
     ||||    
T  21194172 ctagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 16203791 - 16203870
Alignment:
Q  141 tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||||||||| | |||||||| | |||| || |||||| ||||||||||||| |||  ||||||| ||||||||    
T  16203791 tgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccg 16203870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 26312875 - 26312744
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||| |||||| |||| | |||||| ||||| | | |||||||||||||| || | |||||||| ||||||   ||||||| |||||||||| |    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttg 26312776  T
Q  198 ctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    | ||   ||||| |||||||||  ||||||||    
T  26312775 cggtatcggcatatcagtgtccatgtcgtgtc 26312744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 32630687 - 32630786
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||||||||||| ||||  |  |||||||||| ||| || |||||||| ||||| | |||||||| |||||| | | ||||| |||||||||||    
T  32630687 gacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttctcaaattatta 32630786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 7218271 - 7218321
Alignment:
Q  149 accgacacttgtaattacaatgaattttgtgattttttcaaattattagct 199  Q
    ||||||||||||||||||| |||||| |||||||| || ||||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagct 7218321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 15405062 - 15405112
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||| |||||| | |||||||||||||||||||| ||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtg 15405112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 21542151 - 21542089
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    ||||||| |||| | ||| ||||||| |||||||||||||| ||| |||||||||||||||||    
T  21542151 acggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 30183667 - 30183535
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-----------cgacaccgacacttgtaattacaatgaattttgtgattttt 185  Q
    |||||| |||||||||||||||| || ||||||||||| ||| |||||           ||||||||||||||||||||| |  ||||  |||||| |||    
T  30183667 gacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgatattt 30183568  T
Q  186 tcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||| ||||  ||||| ||||||||    
T  30183567 tcaaattattagttgtgtcggcatatcagtgtc 30183535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 2436981 - 2436908
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||| | |||| |||| ||||| |||||||||| |||||||||||| |||  ||| ||||||||||    
T  2436981 cgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 19552569 - 19552626
Alignment:
Q  171 aattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    |||| ||||||||||||||||||||| |||||  ||| |||||||||||| |||||||    
T  19552569 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 22013458 - 22013389
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||| | |||| ||| |||||| ||||||||||||||||  ||| |||||||||||| ||||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 22013389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 17088401 - 17088361
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  17088401 acggacactcctcggattaggcgtgtcccggtgtcggacac 17088361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 36642763 - 36642846
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||| || ||||| | || | ||| | ||||||||||||||| |||||  ||| |||||||||||| ||||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtc 36642846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 41995525 - 41995457
Alignment:
Q  148 caccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||  ||||||| |||||| |||||||||||| ||||||||| ||||  ||| ||||||||||    
T  41995525 caccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtc 41995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 6326262 - 6326296
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtc 128  Q
    ||||||||| |||||||||||||||||||||||||    
T  6326262 acggacacttctcgaattaggcgtgttccggtgtc 6326296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 36642704 - 36642757
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacacc 151  Q
    |||||||||| |||||||||||| ||| |||||||||| ||| ||||||||||||    
T  36642704 gacactcctccaattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacacc 36642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 5894833 - 5894890
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||| ||| | | |||| | |||||||||||||||||||| ||||    
T  5894833 cgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtg 5894890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 6471889 - 6471942
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||| |||| | |||||||| |||||| ||||||||| |||||||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 10010617 - 10010568
Alignment:
Q  141 tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaa 190  Q
    ||||| |||||||||| ||| ||||||||||||| ||| |||||||||||    
T  10010617 tgtcccacaccgacacatgtgattacaatgaattatgtcattttttcaaa 10010568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 11685998 - 11685925
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||| | |||||||| | |||| || || ||| ||||||||||||| |||  ||||||||||||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 23012384 - 23012461
Alignment:
Q  121 ccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||| ||||  ||| |||||| |||||||||| | |||||||| | |||| | ||||||| |||||||||||||    
T  23012384 ccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 38464371 - 38464436
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgt 217  Q
    ||||||| ||||| ||||||||  ||||||||| |||||||||||| ||||  |||||||| ||||    
T  38464371 gacacttataatttcaatgaataatgtgattttctcaaattattagttgtgtcggcatgtcggtgt 38464436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 2548451 - 2548395
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||||||||||| | |||||| |||||| ||| ||||| || ||||||||    
T  2548451 gtgtccgacaccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 7997119 - 7997238
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgtt-gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||| ||||||||||| |||| | | ||||||||||  ||  ||||||||||| ||||||| |||||||| || ||| | | ||||| |||||||||||    
T  7997119 acacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatatcattttctcaaattatta 7997217  T
Q  197 gctgtgctggcatgtcagtgt 217  Q
     | ||| |||| |||||||||    
T  7997218 tccgtgttggcgtgtcagtgt 7997238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 19579818 - 19579766
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac 150  Q
    |||||||||| ||||||||||| |||||||  |||| |||| |||||||||||    
T  19579818 acactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacac 19579766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 40131680 - 40131628
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    ||||||||| | || |||||| | |||||| ||||||||||||||||||||||    
T  40131680 cgacaccgatatttataattaaactgaattatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 23292935 - 23293070
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  23292935 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaatta 23293034  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||  ||| ||||| |||||| ||||||||    
T  23293035 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtc 23293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 21945610 - 21945489
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||| |||||||||||| ||||||||||||  |||  ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  21945610 gacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattatta 21945511  T
Q  197 gctgtgctggcatgtcagtgtc 218  Q
    ||||||  ||||||||||||||    
T  21945510 gctgtgtcggcatgtcagtgtc 21945489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 49431134 - 49431000
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattat 194  Q
    |||||||||||| || |||||||| ||||||| |||||| ||| ||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||    
T  49431134 ggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattat 49431035  T
Q  195 tagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||  ||| ||||| |||||||||||||||    
T  49431034 tagctgtgtcggcgtgtcactgtccgagtcgtgtc 49431000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 28964199 - 28964302
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||||||||| ||||||||||| || |||||||| |  ||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  28964199 ggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattatt 28964298  T
Q  196 agct 199  Q
    ||||    
T  28964299 agct 28964302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 12895227 - 12895325
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||| ||||||||||| ||| ||||||| |||||| ||||||||||||||||||| ||||||||   |||| |||||||||||||||||||||    
T  12895227 acactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 218
Target Start/End: Original strand, 3947710 - 3947839
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacacc-----gacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||||| |||||| |||| | |||||||||||| ||| |||||||||||      |||||||||||||||| |||||| || ||||||||||    
T  3947710 acggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttttca 3947809  T
Q  189 aattattagctgtgctggcatgtcagtgtc 218  Q
    ||||||||||||||  |||||||| |||||    
T  3947810 aattattagctgtgtcggcatgtccgtgtc 3947839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 8423667 - 8423771
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||| |||  ||||||||||| |||||||||||||  ||| |||||||||||||||| || |||||||| |||||| ||||||||| ||||||||    
T  8423667 acggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaatta 8423766  T
Q  194 ttagc 198  Q
    |||||    
T  8423767 ttagc 8423771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 29205533 - 29205450
Alignment:
Q  115 cgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||| |||||||||||||  ||| |||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 35157934 - 35158069
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||| |||| |||| |||||||||||||| |||||  ||| ||||| ||||||||||||| |||||||| | |||| |||||||||| |||||||    
T  35157934 acggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaatta 35158033  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||| || |  ||| |||||||||||| || |||||    
T  35158034 ttagttgcgtcggcgtgtcagtgtccgtgttgtgtc 35158069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 12797295 - 12797418
Alignment:
Q  102 tcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgt 201  Q
    |||||| ||||| | ||| |||||||| ||||  | | |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| | |    
T  12797295 tcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagtttt 12797393  T
Q  202 gctggcatgtcagtgtccgagtcgt 226  Q
    || ||| |||||||||||| |||||    
T  12797394 gccggcgtgtcagtgtccgtgtcgt 12797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 54580006 - 54580080
Alignment:
Q  128 cggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||| ||| ||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| ||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtg 54580080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 4157256 - 4157152
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||||||||||| || |  ||||||||||||  ||| ||||||||||||||||||||||||| || | |||| ||||| |||||||||||||||    
T  4157256 gacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtga-tttttcaaattatta 4157158  T
Q  197 gctgtg 202  Q
    | ||||    
T  4157157 gttgtg 4157152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 38846984 - 38847069
Alignment:
Q  117 tgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||| |||||||||||| ||| || |||||||| |||||||||||||||| |||||  | |||||||||||||||||||||||||    
T  38846984 tgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtg 38847069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 715554 - 715665
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtcc--gacaccgacacttgtaattacaatgaattttgtga-ttttttcaaa 190  Q
    |||||||||||||| ||||||||||| || ||||||||||  ||| |||| |  |||||| ||||||||||||||| |||||| ||||| |||||| |||    
T  715554 acggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattttttttaaa 715653  T
Q  191 ttattagctgtg 202  Q
    ||||||||||||    
T  715654 ttattagctgtg 715665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 752880 - 752991
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtcc--gacaccgacacttgtaattacaatgaattttgtga-ttttttcaaa 190  Q
    |||||||||||||| ||||||||||| || ||||||||||  ||| |||| |  |||||| ||||||||||||||| |||||| ||||| |||||| |||    
T  752880 acggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattttttttaaa 752979  T
Q  191 ttattagctgtg 202  Q
    ||||||||||||    
T  752980 ttattagctgtg 752991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 2361924 - 2362032
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||| ||  |||||| ||||  ||||||| |||||  || ||||||||||||||||||| |||||||| | |||| ||| ||||||||||||||    
T  2361924 acggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaatta 2362023  T
Q  194 ttagctgtg 202  Q
    |||||||||    
T  2362024 ttagctgtg 2362032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 4157543 - 4157455
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttt 185  Q
    ||||||||||||||||||||| |  ||||||||||||  ||| ||||||||||||||||||||||||| || | |||| ||||||||||    
T  4157543 gacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 16073502 - 16073380
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||||||||| |||||||||||    ||||||||||  | | |||||||||||||||||||||||||||| |||||| || || ||||||||||||||    
T  16073502 ggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcga-tttttcaaattatt 16073404  T
Q  196 agctgtgctggcatgtcagtgtcc 219  Q
    |  |||| |||| |||||| ||||    
T  16073403 acttgtgttggcgtgtcagagtcc 16073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 239
Target Start/End: Complemental strand, 36635440 - 36635289
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac-----cga-cacttgtaattacaatgaattttgtgattttttc 187  Q
    |||||||||| ||| ||||||||||| |||||||| ||| | ||| ||||| |||||     ||| ||| | |||||||| |||||| ||||||||| ||    
T  36635440 acggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgtgattttctc 36635341  T
Q  188 aaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtctgt 239  Q
    ||||||||||  ||| |||| ||||||||||||||||||||| | |||||||    
T  36635340 aaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgt 36635289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 11596352 - 11596425
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||||||||||||| || |||| | ||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtc 11596425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 34306768 - 34306860
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||| |  ||| | ||| |||||||||||||||| ||||    
T  34306768 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtg 34306860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 42640634 - 42640528
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatt---ttttcaaa 190  Q
    ||||| |||||||| ||||||||||| | |||| |||||||     |||||||||||||||||||||||||||| |||||| |||||||   ||||||||    
T  42640634 acggaaactcctcggattaggcgtgtcctggtgccggacac-----gtgtccgacaccgacacttgtaattacactgaattatgtgatttttttttcaaa 42640540  T
Q  191 ttattagctgtg 202  Q
    |||| |||||||    
T  42640539 ttatcagctgtg 42640528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 12895116 - 12895172
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgt 201  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgt 12895172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 30299006 - 30298930
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtga-ttttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||||||||||||||| |||||| ||| | ||||||||||||||||||||||  ||| ||||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccg 30298930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 30327874 - 30327798
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtga-ttttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||||||||||||||| |||||| ||| | ||||||||||||||||||||||  ||| ||||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccg 30327798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 19482727 - 19482633
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtctgt 239  Q
    ||||||| |||||||||||||||  ||||| |||||| ||||||||||||||| ||||  ||| |||||||||| | |||||||| | |||||||    
T  19482727 cgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgt 19482633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 28084634 - 28084496
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgt-gtc-cgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaa 190  Q
    |||||||||||||| ||||||||||| || ||||||||||| |||    | | |||||| |||||||||||||||| |||||| ||||||| ||||||||    
T  28084634 acggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcaccgacacgacacagacacttgtaattacattgaattatgtgatttttttcaaa 28084535  T
Q  191 ttattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    || |||||||||  ||| |||||| ||| | ||||||||    
T  28084534 ttcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtc 28084496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 35161146 - 35161056
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    |||||||||  ||| |||||| ||||||||||||||||||| ||| ||||||||| | || |||| |||||||| |||||| |||||||||    
T  35161146 acggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgatttt 35161056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 40481743 - 40481612
Alignment:
Q  102 tcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccg-----acacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||| |||| | ||||| ||||||||||||| ||| |||||| ||||||     ||||||||||||||| |||||| ||||| |||||||||||||||    
T  40481743 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtga-tttttcaaattatta 40481645  T
Q  197 gctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    | |||   ||| |||||||||| | ||||||||    
T  40481644 gttgtatcggcgtgtcagtgtcagtgtcgtgtc 40481612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 195
Target Start/End: Complemental strand, 9996935 - 9996849
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||| ||||||| ||||||||||| |||| |||| |||||||| || | |||||| | |||||| ||||||||| ||||||||||    
T  9996935 attaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 15724498 - 15724554
Alignment:
Q  100 actcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||| ||||||||||||  |||||| ||||| |||||||||||||||||||||    
T  15724498 actcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacac 15724554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 24613702 - 24613758
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||| ||||| |||||| ||||||||| |||||||||||| ||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtg 24613758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 40179595 - 40179687
Alignment:
Q  104 ctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||| |||||||||||   ||||||| |||  ||| ||||||||||||||| | | |||||||| |||||| ||||||||||||||| |||||    
T  40179595 ctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 6879460 - 6879510
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaa 190  Q
    |||||||||||||||||||||||||||| | |||| |||||||||| ||||    
T  6879460 gtgtccgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 30982816 - 30982878
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||| | | ||||||||||| |||||||||||||| ||| ||||| |||||||||||    
T  30982816 acggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 4672037 - 4672142
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||| | ||||| | |||||| |||||| |||| | |||| |||||||||||||| | ||  |||| |||||| ||| |||||  ||||||||||    
T  4672037 gacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccgacacatatagctacactgaattatgtaattttcccaaattatta 4672136  T
Q  197 gctgtg 202  Q
    ||||||    
T  4672137 gctgtg 4672142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 31800442 - 31800535
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||| |||||||  |||||| ||||  ||| |||| ||| ||||||||||||||||||| | |||| | | ||||||| |||||||||||||||    
T  31800442 attatgcgtgttttggtgtcagacatctgtcgtgtacgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtg 31800535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 51701309 - 51701260
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||| | |||| ||| |||||||||||||||||||||||    
T  51701309 acacttgtaattacactcaattatgtaattttttcaaattattagctgtg 51701260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 848009 - 847957
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||||||||||||||| | |||||| ||| ||||| |||||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagc 847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 11651142 - 11651218
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||| || || |||||| ||||||||||| |||||||||||||||  | | ||||||||||||  |||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 11651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 13117493 - 13117449
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||    
T  13117493 gtgtccgacaccgacacttgtgattacattgaattttgtcatttt 13117449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 14465088 - 14465132
Alignment:
Q  158 tgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtg 14465132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 16303266 - 16303350
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||| | |||| | | ||||||||||| ||||| || ||  ||| ||||||||||||  |||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtc 16303350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 13307958 - 13307891
Alignment:
Q  123 ggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaa 190  Q
    |||||| ||||| ||| |||||||||||| |||||||| |||||| |||||| ||| ||||| |||||    
T  13307958 ggtgtctgacacgtgtcgtgtccgacaccaacacttgtgattacattgaattatgtcattttctcaaa 13307891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 24544038 - 24543967
Alignment:
Q  148 caccgacacttgtaattacaatgaattttgtg-attttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    ||||||||||||||||||||||| |||  ||| ||||||| |||||||||| ||||  ||| ||||||||||    
T  24544038 caccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtgtc 24543967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 28720898 - 28720851
Alignment:
Q  182 tttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||||||  ||||||||||||| || ||||||||    
T  28720898 tttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtc 28720851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 482194 - 482279
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttttt 186  Q
    |||||||| ||| ||||| ||||||| |||||| |||||     |||||||||||||||| || |||||||| |||||| |||| ||||||    
T  482194 ggacactcatcggattagacgtgttcaggtgtcagacac-----gtgtccgacaccgacagttataattacactgaattatgtgttttttt 482279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 15029825 - 15029771
Alignment:
Q  144 ccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||| |||| | |||||||| |||||| |||||| ||||||||||||||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagc 15029771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 12628617 - 12628658
Alignment:
Q  177 gtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  12628617 gtgattttttcaaattattaactgtgtcggcatgtcagtgtc 12628658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 30094093 - 30094064
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaat 169  Q
    ||||||||||||||||||||||||||||||    
T  30094093 gtgtccgacaccgacacttgtaattacaat 30094064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 30982878 - 30982931
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||||||||| |||||||| |||| | ||||||||| |||||| ||||||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 37203315 - 37203270
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||| | |||| ||| |||||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattagc 37203270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 47264044 - 47263991
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagct 199  Q
    |||| ||||| |||||||||||  ||||| |||||||||| |||||||||||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattattagct 47263991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 903966 - 903906
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||||| |||||| ||||||||| ||||||||||| | |||| ||  ||||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccg 903906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 4383426 - 4383375
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||| |||| ||||||||||| |||||| ||||| ||||||||||||||||    
T  4383426 cgacactgacatttgtaattacactgaattatgtga-tttttcaaattattag 4383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 5414172 - 5414256
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||| || | |||||||| || ||||||||||||| | |||  ||||||||||  ||| |||| ||||||| ||||||||    
T  5414172 cgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtc 5414256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 12708206 - 12708114
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgatttttt-caaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||| ||||||||||||||||| |||||| | | |||||||  |||||||||| ||||   || |||||||||| | |||||||| ||||||    
T  12708206 cgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtctgcgtcgtgtctgatgtc 12708114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 20633535 - 20633460
Alignment:
Q  151 cgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||| |||||| |||   ||||||||||||||||| |||  | | ||||||||||||  |||||||    
T  20633535 cgacacttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtc 20633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 27706185 - 27706261
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||| | |||| ||||||||||| |||||||||  ||||  | | |||||||||||  ||||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtc 27706261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 50280942 - 50280883
Alignment:
Q  145 cgacaccgacacttgtaattacaa--tgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||| ||||||||||||||   | |||| ||||| |||||||||||||||||||||    
T  50280942 cgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtg 50280883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 42359398 - 42359524
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42359398 acggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaatta 42359497  T
Q  194 ttagctgtgctggcatgtcagtgtccg 220  Q
    |||| ||||   || ||||||||||||    
T  42359498 ttagatgtgtcagcgtgtcagtgtccg 42359524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 37598941 - 37598816
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||||||||| ||  |||||||||| ||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  37598941 acggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaa-tttgtgattttttcaaatta 37598843  T
Q  194 ttagctgtgctggcatgtcagtgtccg 220  Q
    |||| ||||  ||| ||||||||||||    
T  37598842 ttagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 46348332 - 46348458
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||| ||||| || ||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||| | |||| | ||||||||||||||||    
T  46348332 acggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaatta 46348431  T
Q  194 ttagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||  ||| ||||||||||||    
T  46348432 ttagctgtgtcggcgtgtcagtgtccg 46348458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 18337439 - 18337338
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| || |||| ||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  18337439 acggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 18337340  T
Q  194 tt 195  Q
    ||    
T  18337339 tt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 22515836 - 22515944
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||||||||||  |||||||||| |  ||| |||||||||||||||||||||||||||| | |||| ||||||||||||||||||    
T  22515836 acggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaatta 22515935  T
Q  194 ttagctgtg 202  Q
    |||||||||    
T  22515936 ttagctgtg 22515944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 18190061 - 18190165
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||| |||||| |||| |||||||||||||| ||||||||| |||| ||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattattag 18190160  T
Q  198 ctgtg 202  Q
     ||||    
T  18190161 gtgtg 18190165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 40258884 - 40258984
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||||||||| ||||||||||| | |||||||||||  ||| ||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  40258884 ggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 40258983  T
Q  196 a 196  Q
    |    
T  40258984 a 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 1486656 - 1486766
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgac-----accgacacttgtaattacaatgaattttgtgattttttcaaat 191  Q
    ||||||||||| ||||||||||| |||||||||||||| ||| |||||||||     |||||||||| |||||||| |||||| ||||||||||||||||    
T  1486656 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaat 1486755  T
Q  192 tattagctgtg 202  Q
    |||||||||||    
T  1486756 tattagctgtg 1486766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 38078616 - 38078718
Alignment:
Q  100 actcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagct 199  Q
    |||||||| ||||||||||| | ||||| | |||  ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  38078616 actcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagct 38078715  T
Q  200 gtg 202  Q
    |||    
T  38078716 gtg 38078718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 5927289 - 5927424
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||  ||||||| |||| || |||||||||  |||  |||||||||| |||||||||||||||| | |||| | ||||||||||||||||    
T  5927289 acggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaaatta 5927388  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||| ||| | || |||||||||||| ||||||||    
T  5927389 ttagcagtgttagcgtgtcagtgtccgtgtcgtgtc 5927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 16297230 - 16297374
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacacc---gacacttgtaattacaatgaattttgtgattttttcaaa 190  Q
    |||||||||||||| ||||||||||| | ||||||||||||| || ||||||||||||   |||| ||||||||||| |||||||||||||||||||| |    
T  16297230 acggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggaca-ttgtaattacactgaattttgtgattttttcata 16297328  T
Q  191 ttattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||| ||||||  | | ||||||| ||||  ||||||| ||||||    
T  16297329 ttatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtc 16297374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 40181976 - 40181877
Alignment:
Q  99 cactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||| || | |||||||| |||||| ||||||||| |||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 1815367 - 1815241
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||| ||||||||  ||||||||||| |||||||||||||  ||| ||||| |||||||||||||||||||||| |||||| ||||||||||| |||| |    
T  1815367 acggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataa 1815268  T
Q  194 ttagctgtgctggcatgtcagtgtccg 220  Q
    |||  ||||  ||| ||||||||||||    
T  1815267 ttatttgtgtcggcgtgtcagtgtccg 1815241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 100 - 212
Target Start/End: Complemental strand, 51410129 - 51410016
Alignment:
Q  100 actcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattattagc 198  Q
    |||||| | |||||||||||  |||||||||| || ||| |||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||     
T  51410129 actccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaga 51410030  T
Q  199 tgtgctggcatgtc 212  Q
    ||||  ||||||||    
T  51410029 tgtgtcggcatgtc 51410016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 9709884 - 9709788
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||||||||||||||| | ||||||||| ||||| ||||||||| ||||||||||||| |||  |||||||||||||||| |||||||| ||||||    
T  9709884 gtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtc 9709788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 5898215 - 5898319
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||| ||||| ||||||| |||||| ||| ||||| ||||||||| | | |||||||| |||||| ||||||||||||| ||||    
T  5898215 acggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagatta 5898314  T
Q  194 ttagc 198  Q
    |||||    
T  5898315 ttagc 5898319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 18471405 - 18471300
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtga--ttttttcaaat 191  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||| ||||     ||||||||||||||||| | |||||| |||||  |||||||||||    
T  18471405 acggacactcctcgaattaggtgtgtttcggtgtcggacacgtgtcgtgt-----accgacacttgtaattatactgaattatgtgattttttttcaaat 18471311  T
Q  192 tattagctgtg 202  Q
    |||||||||||    
T  18471310 tattagctgtg 18471300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 48450592 - 48450671
Alignment:
Q  150 ccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||| | |||| ||| ||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtc 48450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 22881611 - 22881689
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||  ||| ||||||||||    
T  22881611 gtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 31672890 - 31672969
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    |||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||||  ||  |||||||||||    
T  31672890 gtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 5944400 - 5944249
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-----------cgacaccgacacttgtaattacaatgaattttgtga--tttt 184  Q
    |||||||||| ||||||||| | |||||||||||||  |||||||||           |||||||||||||| |||||||| |||||| |||||  ||||    
T  5944400 acactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgatttttt 5944301  T
Q  185 ttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||||||||||||||||  ||| |||||||||| | |||||||| ||||||    
T  5944300 ttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgtc 5944249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 113358 - 113301
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtg 113301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 2896072 - 2896205
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    ||||||| || | |||||| |||| ||||| |||||||||||| ||||| ||||||||||  | ||  |||| |||||| ||||||||| ||||||||||    
T  2896072 ggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattatt 2896171  T
Q  196 agctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||| |||  ||| |||||||||||| || |||||    
T  2896172 agcggtgtcggcgtgtcagtgtccgtgttgtgtc 2896205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 9103703 - 9103615
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||||||| ||| | | |||| ||||||||||||||||||||| |||||  ||| |||||||||||||||| ||||    
T  9103703 gtgtccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtc 9103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 13011206 - 13011299
Alignment:
Q  136 tgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt-ttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    |||||||||| | ||| ||||||||||||||| | |||| ||||||||| ||||||||||||||||||  ||||||||||||| || |||||||    
T  13011206 tgttgtgtccaaaaccaacacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgt 13011299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 24577186 - 24577243
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtg 24577243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 40917870 - 40917726
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac-----------ttgtaattacaatgaattttgtgatt 182  Q
    ||||||| |||||| ||||||||||| |||||||||||||| ||| |||||| ||||||||||           ||||||||||| | ||||  ||||||    
T  40917870 acggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaatt--gtgatt 40917773  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||  ||| ||||||| |||| ||||||||    
T  40917772 ttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtc 40917726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 6612171 - 6612255
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||   ||| ||||| |||||| ||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtc 6612255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 1704946 - 1705049
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||||||| | |||||||||||  |||||||||||||  ||||   | |||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  1704946 ggacactccttggattaggcgtgtctcggtgtcggacac--gttgacac-gacaccgacacttgtaattaccctgaattatgtgattttttcaaattatt 1705042  T
Q  196 agctgtg 202  Q
    || ||||    
T  1705043 agatgtg 1705049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 19058851 - 19058913
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||||||||| |||||| ||| || |||| |||||||||||||||    
T  19058851 gtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtg 19058913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 35702583 - 35702661
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    ||||||||||| |||||||||||||||| | |||| | |||  ||||||||||||||||||||  ||||||||||||||    
T  35702583 gtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagtgtc 35702661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 398780 - 398849
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||| |||||| ||||||||||||||||||||||| |||  ||| |||||||||||| ||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 398849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 28273089 - 28273162
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    |||||||||||||||||||||| |||||| | |||||||||||||| ||||| ||||   ||||||||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtcc 28273162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 31015097 - 31015020
Alignment:
Q  150 ccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtg 227  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||||||  |||  ||||||| ||| ||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtg 31015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 6427409 - 6427325
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||| |||| | |||||||| |||||| ||||||||| ||||||||||||| ||| |||| |||||||||||| | ||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtc 6427325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 47989556 - 47989473
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||||||  ||||  ||| |||||||||| | ||||||||    
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtc 47989473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 52903356 - 52903257
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||| |||||| || ||||| ||||||||||||||| ||   ||||||||||||||| | |||||||| |||||| | ||||||| | ||||||    
T  52903356 acggacactcttcgaataagccgtgtcccggtgtcggacacacgt---gtccgacaccgacacatataattacactgaattatatgattttattaaatta 52903260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 10577684 - 10577819
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||| | || |||||||| || ||||| |||||  || ||||||| | ||||||| | |||||||| || ||||||||||||| | |||  |    
T  10577684 acggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattttctaaaaaaa 10577783  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||  ||| |||| ||||||| ||||||||    
T  10577784 ttagctgtgtcggcgtgtcggtgtccgtgtcgtgtc 10577819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 18556456 - 18556531
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||| | ||||||||||||| | |||| |||||| ||||||||||||||||||||  ||| ||||||||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccg 18556531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 21378635 - 21378580
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtg 21378580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 32434718 - 32434773
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtg 32434773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 32461465 - 32461536
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    ||||| ||||||||||||||| | |||| |||||||||||||||||||||| ||||| ||| ||||| ||||    
T  32461465 acaccaacacttgtaattacattaaattatgtgattttttcaaattattagttgtgccggcgtgtcactgtc 32461536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 36878576 - 36878447
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcg-gac--acatgtt--gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||| | ||||||||||| || |||||| | |  |||||||  ||||| ||||||||||| | |||||||| |||||| ||||||||| |||    
T  36878576 acggacactcctgggattaggcgtgtccccgtgtcgtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctca 36878477  T
Q  189 aattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||| |||  ||| ||||||||||    
T  36878476 aattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 31694648 - 31694710
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||  ||||||||||||||||||||| | |  |||||||||||||||||||||    
T  31694648 acggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 41877465 - 41877523
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||||||||||||||||||||||| | |||| ||| ||||| |||||||||||||    
T  41877465 gtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagc 41877523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 38075922 - 38076023
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttg-tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||| |||||||||||| |||||||||| ||||  | | |||||||||||||||| | | |||||| ||| || ||||||||  |||||||||||    
T  38075922 acactcctcaaattaggcgtgtcccggtgtcggtcacacatcgatgtccgacaccgacacatatgattacactgacttatgtgatttactcaaattatta 38076021  T
Q  197 gc 198  Q
    ||    
T  38076022 gc 38076023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 5376500 - 5376584
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||| |||||||| |||||| ||| ||||| | ||||||||||| |||  ||| ||| |||||||| ||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtc 5376584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 26830697 - 26830606
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttttt 186  Q
    |||||||||||||  ||||||||||| ||||| ||| |||| ||| ||||| |||| |||||||| |||||||| | |||| |||||||||||    
T  26830697 acggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgaca-cgacacttataattacatttaattatgtgatttttt 26830606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 30749948 - 30749860
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    ||||||||||||||| | |||| | |  |||||  |||||||| ||||||||||||||||| | |||||||| |||||| |||||||||    
T  30749948 ggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 30771399 - 30771311
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    ||||||||||||||| | |||| | |  |||||  |||||||| ||||||||||||||||| | |||||||| |||||| |||||||||    
T  30771399 ggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30771311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 43492458 - 43492542
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||||| |||||||||||||  ||||||||| |||||||||||   ||||||||  |||||  |||||||| ||||||||    
T  43492458 attaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaatta 43492542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 16927200 - 16927279
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtctgt 239  Q
    |||||||| |||||| | |||||||||||||||||||||| ||| | | |||||||||| | |||||||  |||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgtttgatgtctgt 16927279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 17778605 - 17778551
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||||| || ||   ||||||||||||||||||||||||||    
T  17778605 cgacaccgacacttgtaattacactgtat---gtgattttttcaaattattagctgtg 17778551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 1864875 - 1864937
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||| |||||||||| | |||||||| |||||| ||||||||| ||||||||||| |||||    
T  1864875 gtgtccaacaccgacacatataattacactgaattatgtgattttctcaaattattaactgtg 1864937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 6427585 - 6427447
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-----------cgacaccgacacttgtaattacaatgaattttgtga-- 180  Q
    |||||||||| ||  ||||||||||| |||||||||||||| ||| |||||           |||||| |||||||||| ||||| |||||| |||||      
T  6427585 acggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaattatgtgatt 6427486  T
Q  181 -ttttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
     ||||||||||||||||| ||||  ||||||||||||||    
T  6427485 tttttttcaaattattagttgtgtcggcatgtcagtgtc 6427447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 9828165 - 9828103
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||| ||||| ||||| |||||    
T  9828165 acggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 6332729 - 6332673
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||| ||||||||||||| |||||| ||||| |||||||||||||||| ||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtga-tttttcaaattattagttgtg 6332673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 14359529 - 14359605
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||| | |||| ||||||||| |||||||||||||||||  ||| |||| ||||| | ||||||||    
T  14359529 gacacttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtc 14359605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 15323275 - 15323138
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacacc-----gacacttgtaattacaatgaattttgtgattttttcaaat 191  Q
    ||||||||||| |||||| ||||| ||||||||||||| |||  | ||| ||||      |||||||  ||||||| | |||| ||||||||||||||||    
T  15323275 gacactcctcggattaggtgtgtttcggtgtcggacacgtgtcatatccaacacgatacagacacttacaattacactaaattatgtgattttttcaaat 15323176  T
Q  192 tattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||| ||||   | |||||||||||||  ||||||||    
T  15323175 tattaactgtatcgacatgtcagtgtccatgtcgtgtc 15323138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 31694710 - 31694766
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtga--ttttttcaaattattagct 199  Q
    ||||||||||||||||||||| | |||||| |||||  |||||||||||||||||||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagct 31694766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 25452115 - 25452155
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  25452115 acggacactgctcgaattaggcgtgttccggtgtctgacac 25452155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 29144329 - 29144369
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  29144329 acggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 46940761 - 46940797
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||| ||||||||||||||||||||||||||    
T  46940761 acactcctcggattaggcgtgttccggtgtcggacac 46940797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 19562567 - 19562626
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    ||||||||||| |||||| |||| || ||||||||||| |||||| |||||||| |||||    
T  19562567 gacactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacac 19562626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 23738735 - 23738680
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||| |||| | ||||| || |||||| |||||||||||||||||||||||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtg 23738680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 24334700 - 24334763
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttg-tgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||||||||| |||||| ||    ||||||||||| ||||||||||    
T  24334700 gtgtccgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtg 24334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 25452145 - 25452221
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    ||||| ||||||||||| |  ||||||| |||||| || |||||| ||||||||||||| ||| ||||||||| |||||    
T  25452145 gtgtctgacaccgacacat--aattacactgaattatgagattttctcaaattattagcagtgttggcatgtcggtgtc 25452221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 29163345 - 29163420
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    ||||| ||||| |||||||| | ||| ||| ||||||||||||||||| | |||||| | |||||| |||||||||    
T  29163345 attagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgatttt 29163420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 17831473 - 17831604
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgt-tgtgtccgacac--------cgacacttgtaattacaatgaattttgtgatttttt 186  Q
    ||||||||||   ||||||||||| ||||||||||||||||||  |||||||||||        |||||| | | |||||| |||||  ||||||||| |    
T  17831473 ggacactcctaagattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacgacgacacatatgattacactgaataatgtgattttct 17831572  T
Q  187 caaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||| |||  ||| ||||||||||    
T  17831573 caaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 21621019 - 21620973
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgatttttt 186  Q
    ||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  21621019 gtgtccgacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 32461402 - 32461464
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    ||||||||| || | ||||||||||| || ||||| ||||| ||| |||||||||||||||||    
T  32461402 acggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 1262928 - 1262859
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||| | |||||| ||||||||| |||||||||||||||||  ||| |||| |||| || ||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtc 1262859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 2283725 - 2283676
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattat 194  Q
    ||||||| |||||| |||||||| |||||  |||||||||||||||||||    
T  2283725 cgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 218
Target Start/End: Original strand, 8842666 - 8842787
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||| | ||||||||||||| | | ||||||| || ||| |||||||||||| | || | |||||||| | |||| | || |||| |||||||| ||    
T  8842666 gacactctttgaattaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattacta 8842765  T
Q  197 gctgtgctggcatgtcagtgtc 218  Q
    |  |||| ||| ||||||||||    
T  8842766 gtggtgccggcgtgtcagtgtc 8842787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 9629900 - 9629953
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||||||||| |||| ||| |||||| | ||||||| |||||||||||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattagc 9629953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 12443476 - 12443517
Alignment:
Q  161 aattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||| |||||| ||||||||| |||||||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtg 12443517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 14332637 - 14332694
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||||||| || | |||||||| | |||| ||||||||| ||||||||||||    
T  14332637 gtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 15641048 - 15641121
Alignment:
Q  163 ttacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||| |||||  ||||||||| | ||||||||||| |||  |||||||||||||||| ||| |||| ||||||    
T  15641048 ttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtc 15641121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 23705490 - 23705519
Alignment:
Q  169 tgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||||||||||||||||||    
T  23705490 tgaattttgtgattttttcaaattattagc 23705519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 25272541 - 25272484
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||| |||||||| | |||| ||||||||| ||||||| ||| |||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtg 25272484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 28663667 - 28663626
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgatttttt 186  Q
    |||||||||||||||||||||||  ||||| |||||||||||    
T  28663667 cgacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 44482289 - 44482240
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattat 194  Q
    |||||||||||| | |||||||| |||||| ||||||||| |||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 48040465 - 48040546
Alignment:
Q  149 accgacacttgtaattacaatgaattttgtgat-tttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||| ||||| | || | |||||  ||||||||||||||| |||||  ||| |||||||||||| ||||||||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtc 48040546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 7918211 - 7918263
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||| ||||| | |||||||| |||||| ||||||||| ||||||||||||    
T  7918211 cgacactgacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 9828103 - 9828051
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||||| |  ||||||| |||||| ||||||||| ||||||||||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 21366039 - 21366103
Alignment:
Q  164 tacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    |||| |||||| ||| ||||||| |||||||||||||||| ||| |||| |||| || |||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgt 21366103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 21530769 - 21530697
Alignment:
Q  124 gtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||  ||| ||||||||||||||||||| |||||| |   |||| | ||||||| |||||||||||    
T  21530769 gtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 25362003 - 25361945
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||| ||| ||||||  |||||||||||||||||  ||| |||||||||||||||||    
T  25362003 acggacactcttcggattagg--tgttccggtgtcggaca--tgtcgtgtccgacaccgacac 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 27471567 - 27471619
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||| |||| |||||||||| |||||| |||| |||| |||||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagc 27471619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 39953139 - 39953199
Alignment:
Q  138 ttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||||||| |  ||||||| | |||| ||||||||| | |||||||||||    
T  39953139 ttgtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagc 39953199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 48040423 - 48040463
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  48040423 acggacactcctccaattaggcgtgtcccagtgtcggacac 48040463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 85)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 34595244 - 34595109
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||||| |||| |||||||| ||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  34595244 acggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 34595145  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||| ||||  ||| ||||| |||||| ||||||||    
T  34595144 ttagttgtgtcggcgtgtcattgtccgtgtcgtgtc 34595109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 17841538 - 17841664
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||||||||||  | ||||||||||||||| ||||||||||||| |||||||||||||| | |||| ||||||||||||||||||    
T  17841538 acggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaatta 17841637  T
Q  194 ttagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||  ||| ||||||||||||    
T  17841638 ttagctgtgtcggcgtgtcagtgtccg 17841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 7977794 - 7977914
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggca 208  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||  |||     
T  7977794 attaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcg 7977893  T
Q  209 tgtcagtgtccgagtcgtgtc 229  Q
    ||||||| |||  ||||||||    
T  7977894 tgtcagtatccatgtcgtgtc 7977914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 28152204 - 28152083
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||| ||||||| ||| |||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  28152204 acactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattag 28152106  T
Q  198 ctgtgctggcatgtcagtgtccg 220  Q
    || ||  ||| ||||||||||||    
T  28152105 ctttgtcggcgtgtcagtgtccg 28152083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 8776917 - 8777057
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggaca-----catgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||||| |||||| ||||  ||||||||||||     | ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  8776917 acggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttca 8777016  T
Q  189 aattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||| ||||  ||| |||||||||||| ||||||||    
T  8777017 aattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8777057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 28715401 - 28715301
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    ||||| |||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  28715401 acacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattag 28715302  T
Q  198 c 198  Q
    |    
T  28715301 c 28715301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 7265542 - 7265669
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||| ||||||| ||||||| | |||||||||||||||  | ||||||||||||||||||| | |||||||| |||||| ||||||||| ||||||||    
T  7265542 acggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttctcaaatta 7265641  T
Q  194 ttagctgtgctggcatgtcagtgtccga 221  Q
    ||||| ||| |||| |||||||||||||    
T  7265642 ttagcggtgttggcgtgtcagtgtccga 7265669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 9107308 - 9107454
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgac-----------accgacacttgtaattacaatgaattttgtgatt 182  Q
    |||| ||||||||| |||||| |||| ||||||||||||||| ||||||||||||           ||||||||||||||||||| ||||||||||||||    
T  9107308 acgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgatt 9107407  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||  ||| ||| |||||||| ||||||||    
T  9107408 ttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtc 9107454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 16766818 - 16766672
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac-----------ttgtaattacaatgaattttgtgatt 182  Q
    ||||||| || ||| ||||||||||| |||||||||||||| |||||||||||||||||||||           ||||||||||| |||||| |||||||    
T  16766818 acggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatt 16766719  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||  ||| |||||||||||  ||||||||    
T  16766718 ttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtc 16766672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 426509 - 426598
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||||||||||||| | |||| ||||||||||||||||||||| |||||  ||| |||||||||||| ||||||||    
T  426509 gtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtc 426598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 4878052 - 4877944
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtga-ttttttcaaatt 192  Q
    |||||||||||||| ||||||||||| || ||||||||||  ||| |||||||||||||||||||||||||| | | |||| ||||| ||||||||||||    
T  4878052 acggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaaatt 4877954  T
Q  193 attagctgtg 202  Q
    ||||||||||    
T  4877953 attagctgtg 4877944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 32978848 - 32978957
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtg-attttttcaaatt 192  Q
    |||||||||||| | ||||| ||||| |||||||||||||  ||| |||||||||||||||||||||||||||| | |||| ||||  ||||||||||||    
T  32978848 acggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaaatt 32978947  T
Q  193 attagctgtg 202  Q
    ||||||||||    
T  32978948 attagctgtg 32978957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 9658990 - 9658854
Alignment:
Q  94 acggacactcctcg-aattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatt 192  Q
    |||||||||||| | ||||||||||||||||||||| ||||| ||| |||||  |||||||||  | |||||||| |||||| ||||||||| | |||||    
T  9658990 acggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaatt 9658891  T
Q  193 attagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||| |||  ||| |||||||||||| ||||||||    
T  9658890 attagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 10770674 - 10770758
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| |||| |||||||||||  ||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtc 10770758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 16833415 - 16833283
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||| ||| || |||| | |||||||||| | ||| |||||  ||||||||||||||||||||| |||| | |||||||||||||||||||||    
T  16833415 gacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaattatta 16833316  T
Q  197 gctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    | ||||  ||| |||||||||| | ||||||||    
T  16833315 gttgtgtcggcgtgtcagtgtctgtgtcgtgtc 16833283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 12696436 - 12696299
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacacc-----gacacttgtaattacaatgaattttgtgattttttcaaat 191  Q
    ||||||||| | || ||| |||| |||||||| ||||| ||| |||||||||||      |||||||||||||||| |||||| ||| ||||||||||||    
T  12696436 gacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaat 12696337  T
Q  192 tattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||  ||| |||||||||||| ||||||||    
T  12696336 tattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 12696299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 853823 - 853943
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggca 208  Q
    |||||||||||  |  |||||||||||||| || |||||||||||||||||||||| || | |||| |||||||||||||||||||||| ||||  |||     
T  853823 attaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcg 853922  T
Q  209 tgtcagtgtccgagtcgtgtc 229  Q
    ||||||  |||| ||||||||    
T  853923 tgtcagcatccgtgtcgtgtc 853943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 1191678 - 1191757
Alignment:
Q  123 ggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||  || |||||| ||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  1191678 ggtgtcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtg 1191757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 31959260 - 31959146
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||||| |||| |||||||||||||||||| |         |||||||||||||||||| || ||| ||||||||||||||||||    
T  31959260 acggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg---------ccgacacttgtaattacactgcattatgtgattttttcaaatta 31959170  T
Q  194 ttagctgtgctggcatgtcagtgt 217  Q
    |||||||||  ||| |||||||||    
T  31959169 ttagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 24645588 - 24645466
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattatt 195  Q
    ||||||| ||| ||||| |||||   |||||||||||| ||| ||||| ||||||||||||||||| || | |||||| ||||||| |||||||||||||    
T  24645588 gacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttttttcaaattatt 24645489  T
Q  196 agctgtgctggcatgtcagtgtc 218  Q
    |||||||  | ||||||||||||    
T  24645488 agctgtgtcgacatgtcagtgtc 24645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 33001253 - 33001342
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||| || ||||||| ||||| ||| ||||||||||||||||| | |||||||| | |||| |||||||||||||||||||||||    
T  33001253 attaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagc 33001342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 7378089 - 7377985
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||| |||  ||||| ||||| |||||||||||  ||||| ||||||||||||||||| | |||||||| |||||| ||||||||| |||||||     
T  7378089 acggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaattt 7377990  T
Q  194 ttagc 198  Q
    |||||    
T  7377989 ttagc 7377985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 8365519 - 8365603
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||||||| ||||  ||| |||||||||||| ||||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 32511615 - 32511719
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||  |||||||||| |||| |||| |||| |||| || ||||||||| |||||| |||||||| |||||| ||||||||| | ||||||    
T  32511615 acggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaaatta 32511714  T
Q  194 ttagc 198  Q
    |||||    
T  32511715 ttagc 32511719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 228
Target Start/End: Complemental strand, 3398729 - 3398595
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-----cgacaccgacacttgtaattacaatgaattttgtgattttttcaaatt 192  Q
    |||||||||  ||||| |||||||||||||||||||  ||| |||||     ||||||||| |||| |||||||| |||||| | ||| |||||||||||    
T  3398729 acactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatga-tttttcaaatt 3398631  T
Q  193 attagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    ||||||||||  ||| |||||||||||| |||||||    
T  3398630 attagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 6898234 - 6898333
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||| ||| |||||||||||| |||||| ||||||   | |||||||||||||||||||||||||||| | |||| ||| |||| |||||||||||||    
T  6898234 acactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 7930407 - 7930289
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||||||||||||||| | ||||||||||||     ||| | ||||||||||||||| |||| || | |||| |||||||||||||||||||||    
T  7930407 acactcctcgaattaggcgtgtcctggtgtcggacac-----gtgacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattatta 7930313  T
Q  197 gctgtgctggcatgtcagtgtccg 220  Q
      ||||  ||||||||||||||||    
T  7930312 attgtgtcggcatgtcagtgtccg 7930289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 7938180 - 7938091
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||| ||||||||||||| |||||||| | |||| | |||||||||||||||||||||||||  ||| |||||||||||  ||||||||    
T  7938180 gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtc 7938091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 1316039 - 1315969
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattaca 167  Q
    |||||| ||||  |||||||||||| |||||||||||||||  ||| ||||||||||||||||||||||||    
T  1316039 gacacttctcgggttaggcgtgttctggtgtcggacacatgacgtgcccgacaccgacacttgtaattaca 1315969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 7248479 - 7248417
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||| ||| | ||||| ||||||||||||||||||||||||| ||||||||||    
T  7248479 acggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacac 7248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 7801155 - 7801213
Alignment:
Q  144 ccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||||||| ||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtg 7801213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 31385040 - 31384927
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtcc----------gacaccgacacttgtaattacaatgaattttgtgattt 183  Q
    |||||||||||| | ||||||||||| ||||||| |||||| ||| ||||||          ||||| |||||||||||||||| |||||| ||||||||    
T  31385040 acggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactgaattatgtgattt 31384941  T
Q  184 tttcaaattattag 197  Q
    ||||||||||||||    
T  31384940 tttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 23771658 - 23771554
Alignment:
Q  124 gtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagt 223  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| |||| | | | ||||||| ||||||||| |||||  ||| |||| ||||||| ||    
T  23771658 gtgtcggacacatgtcgtgtccgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtccgtgtccgtgt 23771560  T
Q  224 cgtgtc 229  Q
    | ||||    
T  23771559 catgtc 23771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 403859 - 403915
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||    
T  403859 gtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 12868640 - 12868748
Alignment:
Q  109 attaggcgtgttccggtgtcggaca----catgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgct 204  Q
    |||||||||||||| ||||||||||    ||||| |||||||||||||||||| |||||||      ||| ||||||||||||||||||||| |||||      
T  12868640 attaggcgtgttcccgtgtcggacatgtgcatgtcgtgtccgacaccgacactagtaatta-----tattgtgtgattttttcaaattattaactgtgtc 12868734  T
Q  205 ggcatgtcagtgtc 218  Q
    ||| ||||||||||    
T  12868735 ggcgtgtcagtgtc 12868748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 15489733 - 15489789
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtg 15489789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 34073347 - 34073431
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||| | | |||||||| |||||| || |||||| |||||||||||||  || ||||||||||||||||| ||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtc 34073431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 13360322 - 13360420
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||| ||| |||||||||||  | ||||||||||  ||||||||| |||||||| || | |||||||| |||||| ||||||||| ||||||||    
T  13360322 acggacactcttcggattaggcgtgtctcagtgtcggaca-ttgttgtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 9522948 - 9522898
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 9911528 - 9911586
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattt-tttcaaattattagctgtg 202  Q
    ||||||||||||||||||||||| |||||| |||||||| ||| |||||||||||||||    
T  9911528 cgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtg 9911586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 5970108 - 5970165
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||| ||| ||||||||||| |||||| ||||||||||||||||||||| |||||    
T  5970108 cgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtg 5970165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 12627536 - 12627629
Alignment:
Q  104 ctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||| |||||| ||||  ||||||||||||  ||| |||||||||| |||||| | | |||||| |||||| ||||||||||||| ||||||||    
T  12627536 ctcggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 32298560 - 32298677
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||| || |||||||||||||| ||||| ||||| ||||  |||| |||||| |||| | |||||||| | |||| ||||||  | | ||||||||||    
T  32298560 acactcatcaaattaggcgtgttctggtgttggacatatgtcatgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattattag 32298659  T
Q  198 ctgtgctggcatgtcagt 215  Q
    | ||| ||||||||||||    
T  32298660 cggtgttggcatgtcagt 32298677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 9027237 - 9027153
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||| | ||||||||  ||||| ||||||| | ||||||||||||| |||  ||| |||||||||||| ||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9027153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 1681811 - 1681760
Alignment:
Q  151 cgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||| ||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtg 1681760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 3209442 - 3209383
Alignment:
Q  144 ccgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattattagctgtg 202  Q
    |||||||||||||||||||| ||| | |||| ||||||| ||||||||||||||||||||    
T  3209442 ccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtg 3209383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 19040416 - 19040341
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagt 215  Q
    ||||||||||| ||||| | |||||||| |||||| ||||||||| ||||||||||||| |||  ||| |||||||    
T  19040416 gtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 1700416 - 1700362
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattat 194  Q
    ||||||||||||||||||| |||||||| |||| | ||||||||||| |||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 7996378 - 7996452
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    |||||||||| | | |||||||| |||||| | ||||||| ||||||||||||| |||  |||||||||||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtcc 7996452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 8022423 - 8022349
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    |||||||||| | | |||||||| |||||| | ||||||| ||||||||||||| |||  |||||||||||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtcc 8022349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 9025454 - 9025547
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||| |||| ||||||||||| ||||||||||||||           ||||||||||| | |||||||| |||||| ||||||||| ||||||||    
T  9025454 acggacacttctcggattaggcgtgtcccggtgtcggacac-----------gacaccgacacatataattacactgaattatgtgattttctcaaatta 9025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 9629502 - 9629448
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac 150  Q
    |||||||||||| ||||| |||||  | |||||||||||||||||||||||||||    
T  9629502 ggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac 9629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 10339063 - 10339125
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||  ||||||||||| || ||||||||||  ||| |||||||||||||||||    
T  10339063 acggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 21395308 - 21395381
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    ||||||||||||||||||||||| | |||| ||| ||||| ||||||||||||| ||| |||| |||| ||||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtcc 21395381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 5732505 - 5732594
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||| | |||||||| | || | ||||||||| ||||||||||| | |||  ||| |||||||||||  ||||||||    
T  5732505 gtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtc 5732594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 9629443 - 9629358
Alignment:
Q  144 ccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||| | |||||||| |||||| ||||||||| |||||||||| || |||  ||| ||||| | |||| ||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtc 9629358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 17327599 - 17327655
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac 150  Q
    |||||||||||||| ||||||||||| || ||||| ||||| ||| |||||||||||    
T  17327599 acggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 4118341 - 4118384
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||||||| | |||| |||||||||||||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 6349745 - 6349788
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||    
T  6349745 acacatgtaattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 9617493 - 9617442
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||||| | |||||||| |||||| ||||||||| |||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 10827508 - 10827555
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    ||||||||| ||||| |||||||||| ||||||||||||||| |||||    
T  10827508 attaggcgtattccgatgtcggacacgtgttgtgtccgacacagacac 10827555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 12690513 - 12690446
Alignment:
Q  107 gaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaatt 174  Q
    ||||||||||||||| | |||  ||||||||| |||||||||| |||||| | |||||||| ||||||    
T  12690513 gaattaggcgtgttctgatgttagacacatgtagtgtccgacatcgacacatataattacattgaatt 12690446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 17302609 - 17302558
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgatt-ttttcaaattattagctgtg 202  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  17302609 gacacttgtaattacattgaattatgtgatttttttcaaattattagttgtg 17302558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 17341671 - 17341746
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtg 227  Q
    ||||||| |||||||| |||||| ||||||||| ||||||||||| | |||  ||| |||||||| ||| ||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 25010212 - 25010259
Alignment:
Q  155 acttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||| ||  |||||| |||||||||||||||||||||||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattagctgtg 25010259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 34172288 - 34172182
Alignment:
Q  104 ctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgc 203  Q
    |||| ||||||||||| | ||||||||||||     ||||||||||||||||| | |||||  ||| |||| ||||||||| ||||||| ||||  |||     
T  34172288 ctcggattaggcgtgtcctggtgtcggacac-----gtgtccgacaccgacacatataattttaattaattatgtgattttctcaaattgttagaggtgt 34172194  T
Q  204 tggcatgtcagt 215  Q
     |||||||||||    
T  34172193 cggcatgtcagt 34172182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 2117129 - 2117083
Alignment:
Q  151 cgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||| ||||| || |||||| ||||||||||||||||||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattag 2117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 7086852 - 7086770
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||| | |||||||| | |||| ||||||||| ||||||||||||| |||| | | |||| ||||| | ||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 8389417 - 8389478
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggaca-catgttgtgtccgacaccgaca 155  Q
    |||||||||||||| |||||| |||| ||||||||||||| | ||||| ||||||||||||||    
T  8389417 acggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgaca 8389478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 8714039 - 8713981
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattattagctgtg 202  Q
    ||||||| ||| ||||||||||| |||||| ||||||| |||||||||||||| |||||    
T  8714039 cgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtg 8713981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 174
Target Start/End: Original strand, 16388212 - 16388246
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaatt 174  Q
    |||||||||||||||||||||||||||| ||||||    
T  16388212 gtgtccgacaccgacacttgtaattacactgaatt 16388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 17435250 - 17435204
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattattagct 199  Q
    ||||||||||||||| |||||| ||| ||||||| ||||||||||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagct 17435204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 21924930 - 21924988
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||||| | |||||||| |||||| | |||| || |||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagc 21924988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 26402675 - 26402721
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgatttttt 186  Q
    ||||||||||||||||||||| |||||| |||||| ||| |||||||    
T  26402675 gtgtccgacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 31579222 - 31579309
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||| |  ||||||| |||||| ||||||||| ||||||||||| | ||| |||  || ||||||||  ||||||||    
T  31579222 gtgtccgacaccgacacat--aattacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtc 31579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 6327516 - 6327569
Alignment:
Q  143 tccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||| ||||||||||||||||| | |||| | | |||||||||||||||||    
T  6327516 tccgacatcgacacttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 6751878 - 6751927
Alignment:
Q  141 tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaa 190  Q
    |||||||||||||||||||| |||||| |||||| ||| ||||| |||||    
T  6751878 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 6751927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 8365457 - 8365510
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccga 147  Q
    ||||| |||||||| ||||||||||| || ||||||||||| ||| ||||||||    
T  8365457 acggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 8365510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 30851674 - 30851608
Alignment:
Q  130 gacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||| ||| ||||||||||||||||| | |||||||| ||||  |||||||||| | |||||||||||    
T  30851674 gacacgtgtcgtgtccgacaccgacacatataattacattgaa--ttgtgattttcttaaattattagc 30851608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 31429004 - 31429076
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtga-ttttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||| ||| ||||||||||| |||||| ||||| |||||| ||||||||||||| | |||| ||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgattttttttaaattattagctg-ggtggcgtgtcagtgtc 31429076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 5462730 - 5462694
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  5462730 taattacaatgaattatgtgattttctcaaattatta 5462694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 7151471 - 7151419
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    ||||||| |||| | |||||||| | |||| ||||||||||||||||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 10294166 - 10294082
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||| | |||||||| |||| | || |||| | ||||||||||||| ||   ||||||||||| |||| ||||||||    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtc 10294082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 13851800 - 13851712
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    ||||| |||| |||||| | |||||||| ||||||  || ||||| ||||||||||||| |||  | | |||||||||||| |||||||    
T  13851800 gtgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 30866149 - 30866197
Alignment:
Q  150 ccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||| | |||||||| |||||| ||||||||| |||||||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagc 30866197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 411 - 537
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||||| |||| ||||||||||||||  || |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  411 acggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaatta 510  T
Q  194 ttagctgtgctggcatgtcagtgtccg 220  Q
    ||||| |||  ||| | ||||||||||    
T  511 ttagcagtgtcggcgtatcagtgtccg 537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 94 - 226
Target Start/End: Complemental strand, 55401185 - 55401053
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||| | |||| ||||||||||||||||||    
T  55401185 acggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaatta 55401086  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgt 226  Q
    |||| ||||  ||| | |||||||||| |||||    
T  55401085 ttagttgtgtcggcgtatcagtgtccgtgtcgt 55401053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 217
Target Start/End: Complemental strand, 10955056 - 10954939
Alignment:
Q  100 actcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagct 199  Q
    |||||||| ||||||||||| || ||||||||||| ||| ||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||| |    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagtt 10954957  T
Q  200 gtgctggcatgtcagtgt 217  Q
    |||  ||| |||||||||    
T  10954956 gtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 28918111 - 28917976
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtcc--gacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||| | ||||||||||| || ||||||||||| ||| ||||||  |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  28918111 ggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 28918012  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||| ||  ||| ||||||| |||| ||||||||    
T  28918011 ttagctatgtcggcgtgtcagtttccgtgtcgtgtc 28917976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 20503575 - 20503451
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||||||||| |||||||| ||||  ||| |||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  20503575 acggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaatta 20503476  T
Q  194 ttagctgtgctggcatgtcagtgtc 218  Q
    || | ||||  ||| ||||||||||    
T  20503475 tttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 219
Target Start/End: Complemental strand, 25775613 - 25775493
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattatta 196  Q
    |||||||||| ||||||||||| | ||||||||||||  |  |||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  25775613 acactcctcggattaggcgtgtcctggtgtcggacac--gacgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattatta 25775516  T
Q  197 gctgtgctggcatgtcagtgtcc 219  Q
      |||| |||| |||||||||||    
T  25775515 aatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 229
Target Start/End: Original strand, 26492155 - 26492289
Alignment:
Q  95 cggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattat 194  Q
    |||||| |||||| ||||| |||||   |||||| ||||  ||| |||||||||||||| ||||||||||||| |||||| | |||||||||||||||||    
T  26492155 cggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattat 26492254  T
Q  195 tagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||| ||  ||| |||||||||||| ||||||||    
T  26492255 tagctctgtcggcgtgtcagtgtccgtgtcgtgtc 26492289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 7171607 - 7171467
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||| | |||||||||||  ||||||||||||| ||| |||||||||||| |||||||||||||||  ||||| | ||| ||||||||||||  ||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatga-tttttcaaattacaag 7171509  T
Q  198 ctgtgctggcatgtcagtgtccgagtcgtgtcggatgtctgt 239  Q
    |||||  ||||||||||| |||| |||||||| | |||||||    
T  7171508 ctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgt 7171467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 4987229 - 4987363
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac-----------ttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||| |||||| ||||||||||           ||||||||||| |||||| |||||||    
T  4987229 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgatt 4987328  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgt 217  Q
    ||||||||||||||||||||  ||| |||||||||    
T  4987329 ttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 40993286 - 40993389
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtga-ttttttcaaattat 194  Q
    |||||||||||| ||||||||||| |||||||||||||  ||| ||||||||||||||||| | |||||||| |||||| ||||| |||||| |||||||    
T  40993286 ggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattat 40993385  T
Q  195 tagc 198  Q
    ||||    
T  40993386 tagc 40993389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 11252083 - 11251984
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||| ||||||||||||||| || ||||||| ||||||||| |||||||||||   |||||||| |||||| ||||||||| |||||||||||    
T  11252083 gacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacac--ataattacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 228
Target Start/End: Original strand, 15999959 - 16000099
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgt------ccgacaccgacacttgtaattacaatgaattttgtgattttttc 187  Q
    |||||||||||| | ||||||||||| |||||||||||||| ||| ||||      |||||||||||||||||| ||||| |||||| ||| |||||||     
T  15999959 acggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgttattttttt 16000058  T
Q  188 aaattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    |||||||||| ||||  ||| |||||||||| | |||||||    
T  16000059 aaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 27505361 - 27505248
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-----cgacaccgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||||| ||||||| ||| |||||||||||||| ||| |||||     ||||||||||||||||||||||| | |||| ||||||||||  |    
T  27505361 acggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttttaaa 27505262  T
Q  189 aattattagctgtg 202  Q
    ||||||||||||||    
T  27505261 aattattagctgtg 27505248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 24204990 - 24205125
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgt-tgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatt 192  Q
    |||||||||||||||||||||||||| | ||||||||||||  ||  |||||||||| |||||||| |||||||| || ||| ||| ||||| |||||||    
T  24204990 acggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgaca-cgacacttataattacactgtattatgtcattttctcaaatt 24205088  T
Q  193 attagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||| | |||  ||| |||||||||||| ||||||||    
T  24205089 attatccgtgtcggcgtgtcagtgtccgtgtcgtgtc 24205125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 51206302 - 51206410
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||| | |||||  || | |||||||||||| |    ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  51206302 acggacactccttggattagaggtatcccggtgtcggacgcgacatgtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaatta 51206401  T
Q  194 ttagctgtg 202  Q
    |||||||||    
T  51206402 ttagctgtg 51206410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 21479178 - 21479104
Alignment:
Q  144 ccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 34185061 - 34185176
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgac-----------accgacacttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||           ||||||||||||||||||| |||||| |||||||    
T  34185061 acggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgatt 34185160  T
Q  183 ttttcaaattattagc 198  Q
    |||| |||||||||||    
T  34185161 ttttgaaattattagc 34185176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 8587017 - 8587105
Alignment:
Q  141 tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||||||||| ||| ||||  ||| |||||||||||| ||| ||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtc 8587105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 49651786 - 49651853
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtc 212  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||  ||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 26508166 - 26508112
Alignment:
Q  148 caccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtg 26508112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 1509598 - 1509541
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtg 1509541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 8383321 - 8383232
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||| |||||||| |||||| | ||||||| ||||||||||||| |||  ||| ||||| |||||| ||||||||    
T  8383321 gtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtc 8383232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 14829748 - 14829676
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||  ||| ||||||||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtga-tttttcaaattattagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 15796247 - 15796378
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgac-----------accgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    ||||||||||||||||||| |||||| |||||||||||||           ||||||| ||||||||||| |||||| | |||||||||||||||||||     
T  15796247 attaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaa 15796346  T
Q  198 ctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||  ||| ||||| |||||| ||||||||    
T  15796347 ctgtgtcggcgtgtcattgtccgtgtcgtgtc 15796378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 10268481 - 10268560
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    ||||| ||||| |||||||||||||||| | |||| ||||||||||||||||||||| |||||  ||| |||||||||||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtcc 10268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 18427059 - 18426956
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||  |||||| |||| |||||| ||||||| ||| || |||||||||||||  | ||||||||  ||||| ||||||||||| ||||||    
T  18427059 acggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgattttttgaaatta 18426960  T
Q  194 ttag 197  Q
    ||||    
T  18426959 ttag 18426956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 25093582 - 25093467
Alignment:
Q  124 gtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagt 223  Q
    ||||||||||  ||||||||||||||||||||| | |||||||| |||||| ||||||||| |||||| |||| | |||  ||| ||| |||||| | ||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgt 25093483  T
Q  224 cgtgtcggatgtctgt 239  Q
    |||||| | |||||||    
T  25093482 cgtgtccggtgtctgt 25093467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 25948887 - 25948962
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||| |||||| |||||||| |||||| ||||||||||||||||||||||| ||   ||||||||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccg 25948962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 7928514 - 7928456
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||||| | |||||||| |||||| |||||||||||||||||||||||    
T  7928514 gtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagc 7928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 24633360 - 24633458
Alignment:
Q  104 ctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||| |||||||  ||||  ||| |||||| |||||||||| | |||||||| ||||||  ||||||||| |||||||||| |||||    
T  24633360 ctcgaattaggcgtgtaccggtgttagacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgatttttccaaattattaactgtg 24633458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 10335285 - 10335370
Alignment:
Q  144 ccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||| ||||| | || | ||||| |||||||||||||||| ||||  ||| |||||||||||| ||||||||    
T  10335285 ccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 10335370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 21256990 - 21257043
Alignment:
Q  149 accgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  21256990 accgacacttgtaattatactgaattatgtgattttttcaaattattagctgtg 21257043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 34910376 - 34910319
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtg 34910319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 35994734 - 35994821
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||||  ||| ||||| |||||  ||||||||    
T  35994734 gtgtccgacac-gacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtc 35994821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 14832158 - 14832102
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgt 201  Q
    |||||| |||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  14832158 cgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgt 14832102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 41961650 - 41961734
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||||||||  ||||  |||||| ||||||||||||||| ||||  ||| |||||||||| | ||||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtc 41961734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 8789497 - 8789599
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgtt--gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaat 191  Q
    |||||||||||||| |||||||||||  ||||||| ||||  |||   ||||||||||||||||| | ||||||||  ||||| ||||||||| ||||||    
T  8789497 acggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaat 8789596  T
Q  192 tat 194  Q
    |||    
T  8789597 tat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 4466549 - 4466651
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||||||||||| || ||||| || ||||||||||||| |||| |||||||||| ||| | ||  |||| |||||| | ||||||| | ||||||    
T  4466549 acggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccggcacatatagctacactgaattatatgattttcttaaatta 4466648  T
Q  194 tta 196  Q
    |||    
T  4466649 tta 4466651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 8593200 - 8593138
Alignment:
Q  141 tgtccgacaccgacacttgtaattacaatgaattttgtgatttttt-caaattattagctgtg 202  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||| ||||||| ||||||||    
T  8593200 tgtccgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtg 8593138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 35223048 - 35222958
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    |||||||||||||| || | |||||| || ||||| ||||| |||  |||||||||||||||| | |||||||| |||||| |||||||||    
T  35223048 acggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgatttt 35222958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 3163982 - 3164082
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattat 194  Q
    ||||||||||||||||||||||||  |||||||||||||       | | ||||| | ||||||||  ||||| |||||| |||||||||||||||||||    
T  3163982 ggacactcctcgaattaggcgtgtctcggtgtcggacac-------gacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattat 3164074  T
Q  195 tagctgtg 202  Q
    ||||||||    
T  3164075 tagctgtg 3164082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 14209172 - 14209115
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||| |||||||||||||||| |||||| ||||||||||| |||||||||| ||||    
T  14209172 cgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtg 14209115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 28812574 - 28812517
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||| |||| |||||| |||||||| ||||||||||||| ||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtg 28812517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 11610573 - 11610489
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||||||||| |||| |||||| ||||||||||| ||||||||||| ||| |||| ||||||| || | || ||||| ||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtatctgtgttgtgtctgatgtc 11610489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 14216951 - 14216867
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||| |||||||||||||||| |||||| | |||| |||| |||||||||| ||||  | | |||||||||||| ||||||||    
T  14216951 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 14223080 - 14222996
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||| |||||||||||||||| |||||| | |||| |||| |||||||||| ||||  | | |||||||||||| ||||||||    
T  14223080 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 3631794 - 3631708
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtga 180  Q
    |||||||||||||| | ||||||||| | |||||||||||  ||| ||||||||||| | ||| | |||||||| |||||| |||||    
T  3631794 acggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 13845474 - 13845564
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    |||||||||||| | || ||||||||  | ||||| ||||| | | ||||||||||||||||| | |||||||| || |||||||||||||    
T  13845474 acggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgatttt 13845564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 14747621 - 14747547
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgatttttt-caaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||| ||| |||||||||||| | |||| ||||||||||| ||||||||||||||||  ||| ||||||||||    
T  14747621 cgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 32400703 - 32400780
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||| ||||||||||||||||   |||| ||| || ||||||||||||||||||||  | | ||||||||||||    
T  32400703 gtgtccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtccg 32400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 40052368 - 40052318
Alignment:
Q  168 atgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  40052368 atgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 750618 - 750675
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||| ||  ||||| |||||| ||||||||||||||| ||||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtg 750675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 14979224 - 14979183
Alignment:
Q  161 aattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||| |||||| |||||||||||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtg 14979183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 23916003 - 23915934
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||| | |||| |||||||||||||| || ||||||||| |||||||||||| || | ||||||||    
T  23916003 taattacatttaattgtgtgattttttcaagttgttagctgtgttggcatgtcagtttctgtgtcgtgtc 23915934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28576801 - 28576724
Alignment:
Q  120 tccggtgtcggacacatg-ttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||| |||||||| |||| || || |||||||| |||||||||| | |||||||| ||||| |||||||||||    
T  28576801 tccggtgtctgacacatgcttgtttctgataccgacacatgtaattacattcaattttgtcattttctcaaattatta 28576724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 33359865 - 33359763
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||||||| |||||| ||||| ||| ||||||||| |      ||||||||| |||||||||| ||||| | || | |||||  |||||||||||    
T  33359865 acggacactcctccaattagacgtgtcccgatgtcggacata------gtccgacactgacacttgtatttacactaaaatatgtgaccttttcaaatta 33359772  T
Q  194 ttagctgtg 202  Q
    |||||||||    
T  33359771 ttagctgtg 33359763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 45451635 - 45451559
Alignment:
Q  122 cggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||  ||| ||||||||||||||||| | | |||| | |||| | ||||||||| |||||||||||||    
T  45451635 cggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagc 45451559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 2941637 - 2941578
Alignment:
Q  125 tgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    |||| ||||| ||| ||||||||||||||||| | |||||||| || |||||||||||||    
T  2941637 tgtcagacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgatttt 2941578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 3865749 - 3865690
Alignment:
Q  129 ggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||| ||| ||||| |||||||||||||||||||| | |||||| ||||| |||||||    
T  3865749 ggacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgtgagtttttca 3865690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 4990967 - 4991050
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    |||| |||||||||||||||||| |||||| ||| ||||| ||||| ||||||| |||  ||  ||||||| |||| |||||||    
T  4990967 cgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgt 4991050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 39756295 - 39756244
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||||||||||||| | | |||| ||||||||||| |||||||||    
T  39756295 cgacaccgacacttgtaattatattaaattatgtgatttttttaaattatta 39756244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 55213020 - 55212965
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||| || | |||| ||||||||||| ||||||||| |||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtg 55212965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 1550199 - 1550137
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggc 207  Q
    |||||| ||||| | |||||||| |||||  ||||||||||||||||||||||| ||| ||||    
T  1550199 cgacactgacacctataattacactgaatagtgtgattttttcaaattattagcggtgttggc 1550137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 14338454 - 14338528
Alignment:
Q  116 gtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaa 190  Q
    |||| |||||||| || || ||| ||||| |||||||||| |||| |||||| |||||| ||| |||||||||||    
T  14338454 gtgtcccggtgtccgatacgtgtcgtgtctgacaccgacatttgtgattacattgaattatgtcattttttcaaa 14338528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 17005621 - 17005671
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||||| |||||||| |||||| | ||||||| ||||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 38731278 - 38731224
Alignment:
Q  144 ccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||| | ||| |||| |||||| ||||||||||| |||||||||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaattattagc 38731224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 49505149 - 49505207
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||| ||||| | |||||||| | |||| ||||||||| |||||||||||||    
T  49505149 gtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagc 49505207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 11666003 - 11665950
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||||||| | |||||||| | |||| ||||||||| |||||||||||||    
T  11666003 cgacaccgacacatataattacactaaattgtgtgattttatcaaattattagc 11665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 23657849 - 23657748
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgat-tttttcaaatt 192  Q
    |||||||||  ||| |||||| |||| ||||| ||||||| ||||  ||||||||||||| | || |||||||| |||||| | |||| ||||| |||||    
T  23657849 acggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaattatatgatattttttaaatt 23657750  T
Q  193 at 194  Q
    ||    
T  23657749 at 23657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 41961588 - 41961641
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccga 147  Q
    ||||||||| |||| ||||||||||| || ||||||||||| ||| ||||||||    
T  41961588 acggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 41961641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 1509677 - 1509637
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  1509677 acggacactcctccgattaggcgtgtaccggtgtcggacac 1509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 3865587 - 3865631
Alignment:
Q  176 tgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||| ||||||||||||||||||||||  ||| ||||||||||||    
T  3865587 tgtggttttttcaaattattagctgtgtcggcgtgtcagtgtccg 3865631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 8039835 - 8039903
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtca 213  Q
    |||||||||||| | |||||||| |||||| | | ||||| ||||||||||||| ||| |||| |||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 9800099 - 9800015
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||  |||||||  ||||| ||| ||||| ||||||||||||  |||  ||| ||||||||| || ||||||||    
T  9800099 cgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtc 9800015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 10318065 - 10318109
Alignment:
Q  176 tgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||| |||||||||||||||||||||  ||| ||||||||||||    
T  10318065 tgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccg 10318109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 21149174 - 21149075
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttg-tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||| |||||| |||||| |||||| |||||| |||||| |||| ||||||||| |||||  | | |||||| |||||| ||| ||||| ||||||||||    
T  21149174 gacattcctcggattaggtgtgttc-ggtgtcagacacacgttggtgtccgacaacgacatctttgattacactgaattatgtcattttctcaaattatt 21149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 32804493 - 32804622
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||  ||||||||| || | ||| ||||||  ||| ||||||||    ||||| | |||||||| | |||| ||||||||| ||||||||    
T  32804493 acggacactcctcagattaggcgtttttcagtggcggacatgtgtcgtgtccga----gacacatataattacactaaattatgtgattttctcaaatta 32804588  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtg 227  Q
    ||| | |||  ||||||||| || ||| ||||||    
T  32804589 ttaacggtgtcggcatgtcaatgcccgtgtcgtg 32804622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 40052418 - 40052382
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  40052418 acactcctcggattaggcgtgtcccggtgtcggacac 40052382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 2438668 - 2438776
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  2438668 acggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaatta 2438767  T
Q  194 ttagctgtg 202  Q
    |||||||||    
T  2438768 ttagctgtg 2438776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 94 - 218
Target Start/End: Original strand, 38117108 - 38117232
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||  ||| | ||||||||||||||||||    
T  38117108 acggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaatta 38117207  T
Q  194 ttagctgtgctggcatgtcagtgtc 218  Q
    |||||||||  ||| ||||||||||    
T  38117208 ttagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 37559087 - 37558961
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||| |||||| |||||||||||||| |||   |||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  37559087 acggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaaatta 37558988  T
Q  194 ttagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||  ||| ||||||||||||    
T  37558987 ttagctgtgtcggcgtgtcagtgtccg 37558961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 5040844 - 5040735
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatt--ttttcaaat 191  Q
    |||||||||||| | | ||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||  |||||||||    
T  5040844 acggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttttcaaat 5040745  T
Q  192 tattagctgt 201  Q
    ||||||||||    
T  5040744 tattagctgt 5040735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 239
Target Start/End: Complemental strand, 15972983 - 15972838
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||| || ||| |||||| |||| |||| ||||||||| ||| |||||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  15972983 acggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaatta 15972884  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtctgt 239  Q
    |||  ||||  ||| |||||||||||| ||||| || | |||||||    
T  15972883 ttaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtgtctgt 15972838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 18840962 - 18841097
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||||| |||| |||||||||||||  ||| ||||| |||||||||||||||||||||| | |||| ||| ||||||||||||||    
T  18840962 acggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaatta 18841061  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||| ||||   || |||||||||||  ||||||||    
T  18841062 ttagttgtgtcagcgtgtcagtgtccatgtcgtgtc 18841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 30404814 - 30404934
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggca 208  Q
    ||||||| ||| | |||||||||||  ||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||| | |||  |||     
T  30404814 attaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcg 30404913  T
Q  209 tgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||| ||| ||||    
T  30404914 tgtcagtgtccgtgtcatgtc 30404934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 14996171 - 14996308
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtcc-----gacaccgacacttgtaattacaatgaattttgtga-ttttttcaaa 190  Q
    ||||||||||| |||||||||||||||||||| ||||| || |||||||     |||||||||||||||||||||| | |||| | ||| ||||||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtg-tgtgtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaa 14996269  T
Q  191 ttattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||  ||| |||||||||||| ||| ||||    
T  14996270 ttattagctgtgtcggcttgtcagtgtccgtgtcatgtc 14996308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 12224329 - 12224212
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtga--ttttttcaaattatt 195  Q
    |||||||| | ||||||||||| || ||||||||||| | | |||||||||||||||||||||||||||| || ||| || ||  |||||||||||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggattttttttcaaattatt 12224230  T
Q  196 agctgtgctggcatgtca 213  Q
    |||| || |||| |||||    
T  12224229 agctatgttggcgtgtca 12224212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 19536392 - 19536482
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtga-ttttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||||  ||| ||||| |||||| ||||||||    
T  19536392 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtc 19536482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 20539674 - 20539758
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||| | |||| | |||||||||||||||||||||||||  | | |||||||||||| ||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtc 20539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 21624372 - 21624242
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttg-tgattttttcaaatt 192  Q
    |||||||||||| | |||||| |||| ||| ||||||||||     |||||||||||||||||||||||||||| |||||| || |  |||||| |||||    
T  21624372 acggacactccttggattaggtgtgtcccgctgtcggacac-----gtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaatt 21624278  T
Q  193 attagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    ||||||||||  ||| |||||||||| | |||||||    
T  21624277 attagctgtgtcggcgtgtcagtgtctgtgtcgtgt 21624242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 28596579 - 28596447
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgat-tttttcaaatt 192  Q
    |||||||||||||| |||||| |||| |  ||||||||||| ||| ||||||||||||||||||| |||||||| ||| || |||||| |||||||        
T  28596579 acggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgatgtttttca---- 28596484  T
Q  193 attagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||  ||| ||||| |||||| ||||||||    
T  28596483 attagctgtgtcggcgtgtcattgtccgtgtcgtgtc 28596447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 37419864 - 37419727
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac-----------ttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||| ||||||||||| ||||||||||||||   | |||||||||||||||||           ||||||||||| ||||||||||||||    
T  37419864 acggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgatt 37419765  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||||| ||  ||  ||| ||||||||||||    
T  37419764 ttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 18422027 - 18421931
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    |||| ||||||||||||||||||||||| |||||| |||||| |||| |||||||||  ||||  ||| |||||||||||| ||||| || ||||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatccgatgtc 18421931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 20242679 - 20242811
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||| ||| || |||||||| |  ||||| ||||| ||||||||||||||||||||| | |||||||| |||||| ||||||||| | |||  ||||    
T  20242679 gacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaatta 20242778  T
Q  197 gctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    | ||||  ||| |||||||||||  ||||||||    
T  20242779 gttgtgtcggcgtgtcagtgtccatgtcgtgtc 20242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 30717530 - 30717610
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcg 225  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||||||||||| ||  ||  |||||||||||| ||||    
T  30717530 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 6940336 - 6940233
Alignment:
Q  123 ggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgag 222  Q
    ||||| |||||| ||| ||||| || ||||||||||||||||||| | |||| ||| | ||||| |||||||||||||||  ||| |||||||||||| |    
T  6940336 ggtgttggacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 6940237  T
Q  223 tcgt 226  Q
    ||||    
T  6940236 tcgt 6940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 34993935 - 34994051
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||| ||||||||||||| || ||||||||||||||| |||| |||||| ||||| | |||||||| |||||| ||      ||||||||||||||    
T  34993935 acactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatg------tttcaaattattag 34994028  T
Q  198 ctgtgctggcatgtcagtgtccg 220  Q
    | ||| |||| | ||||||||||    
T  34994029 cggtgttggcgtatcagtgtccg 34994051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 37411198 - 37411313
Alignment:
Q  99 cactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||| | ||||||||| || |||||||||||  || |||| ||||| |||||| | |||| ||| |||||| ||||||||| |||||||||||||    
T  37411198 cactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaattattagc 37411297  T
Q  199 tgtgctggcatgtcag 214  Q
     |||  ||||||||||    
T  37411298 ggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 20473386 - 20473308
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||| ||||||||||||||||| |||||| | ||| ||||| |||||||||| ||||  ||||||||||||||    
T  20473386 gtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtc 20473308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 5367287 - 5367199
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    ||||||||||| |||| |||||| |  ||| ||||||||||||||||| | |||||||| |||||| ||||||||  ||||||||||||    
T  5367287 attaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 11223864 - 11223920
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtg 11223920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 15657923 - 15657839
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||| ||||||||||| |||||| |||||||||| ||||||||||| || |  ||| ||| |||||||| ||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtc 15657839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 21374706 - 21374774
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||||||||  ||| ||| ||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccg 21374774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 19942373 - 19942314
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgaca 155  Q
    |||||||||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||    
T  19942373 ggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 18255975 - 18256037
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||| |||||||| | |||| ||||||||||| ||||||||| |||||    
T  18255975 gtgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtg 18256037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 35056989 - 35056927
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||  |||||||||||| | ||||||||||| ||| |||||||||||||||||    
T  35056989 acggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 44860441 - 44860379
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||| |||||| ||||| ||||    
T  44860441 acggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacac 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 974806 - 974749
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||||| |||||  |||||| ||||||||||||||| ||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtg 974749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 23058442 - 23058527
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtga-ttttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||| || ||| ||||| ||||||||||||||||  ||||  ||| ||||| |||||| ||||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtc 23058527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 26769632 - 26769571
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgaca 155  Q
    |||||||||||||| ||||||||||| || ||||||||||| ||| |||||||| |||||||    
T  26769632 acggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 12668423 - 12668475
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||||||| |||||||| |||||| ||| ||||||||||||||||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattag 12668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 18420436 - 18420504
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagt 215  Q
    |||||||||||| ||||| || |||||| ||||||||| ||||||||||||| ||| |||| |||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagt 18420504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 30335476 - 30335392
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||| ||||||||||| | |||| ||| |||||||||||||||||| ||||  ||| ||  |||||||| ||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtc 30335392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 42511331 - 42511387
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac 150  Q
    |||||||||||||| ||||| ||||| || ||||||||||| |||||||||||||||    
T  42511331 acggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 24894440 - 24894373
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||| ||||| || |||||| ||||||||||| |||||||||||||||  ||| ||||||||||||    
T  24894440 acacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccg 24894373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 31018654 - 31018575
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    ||||||||||||||||| | |||||||| | |||  ||||||||| | ||||||||||| ||| |||| |||||||||||    
T  31018654 gtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtcc 31018575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 12940941 - 12941019
Alignment:
Q  151 cgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||| ||||||||||| |||||| | |||||||||||||||||||| ||||    | |||||||||||| ||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 34691800 - 34691858
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||||| | |||||||| |||||| | ||||||| |||||||||||||    
T  34691800 gtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 34714212 - 34714270
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||||| | |||||||| |||||| | ||||||| |||||||||||||    
T  34714212 gtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 36756344 - 36756434
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgt 235  Q
    |||||||||||||| |||||||| |||||| ||| |||| ||||||||||||| ||||  | | |||||||||| | ||||| || |||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatgt 36756434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 218
Target Start/End: Original strand, 43586000 - 43586078
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    ||||||||||||||||||||| |||||| |||||| ||| ||||| ||||| | ||| ||||| || | ||||||||||    
T  43586000 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatctgtgttgacgtgtcagtgtc 43586078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 21616806 - 21616737
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||| |||||| ||||||||| ||||||||||||| |||  ||| |||| ||||||| ||||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 24009405 - 24009298
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||| | || |||||||| || ||||| ||||| ||| ||||||||||||||||| |  | ||||| || ||||||||||||| | |||  |    
T  24009405 acggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacat-aatttacactgcattttgtgattttctaaaaaaa 24009307  T
Q  194 ttagctgtg 202  Q
    |||||||||    
T  24009306 ttagctgtg 24009298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 33153483 - 33153431
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||| |||||||||||||||| |||||| ||||||||||| |||| |||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtgatttttttaaatcattag 33153431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 34006939 - 34007042
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac-atgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatt 192  Q
    |||||||||||| |||||||| ||||||||||||| ||||| |    |||||| |||||||||| | | |||||| |||||| ||| | ||| |||||||    
T  34006939 acggacactccttgaattaggtgtgttccggtgtcagacacgaataggtgtcccacaccgacacctatgattacactgaattatgtcaatttctcaaatt 34007038  T
Q  193 atta 196  Q
    ||||    
T  34007039 atta 34007042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 21091833 - 21091707
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||| ||| | |||| |||| |||||||| ||||  ||   |||| ||||| |||||||||||||||| |||| | ||| ||||| | ||||||    
T  21091833 acggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgacacttgtaattacactgaagtatgttattttcttaaatta 21091734  T
Q  194 ttagctgtgctggcatgtcagtgtccg 220  Q
    ||||| |||  ||  ||||||||||||    
T  21091733 ttagcggtgtcggtgtgtcagtgtccg 21091707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 23718087 - 23718001
Alignment:
Q  143 tccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||| ||||||||| | |||||||| |||||| ||||| ||| ||||||||||||| |||  ||  |||||||||||| ||| ||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 23718001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 24105759 - 24105673
Alignment:
Q  143 tccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||| ||||||||| | |||||||| |||||| ||||| ||| ||||||||||||| |||  ||  |||||||||||| ||| ||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 24105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 27084376 - 27084318
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgaca 155  Q
    ||||||||||  |||||||||||  |||||| |||||| ||| ||||||||||||||||    
T  27084376 gacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 28677953 - 28677915
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagc 28677915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 29176488 - 29176550
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||| ||||| |||||| |||||||| |||||| |||||  |||||||||||||| |||||    
T  29176488 gtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattattaactgtg 29176550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 34221502 - 34221572
Alignment:
Q  150 ccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||||||| ||  ||||| |||  ||||||||||||||||||||||  ||||| ||||| ||||    
T  34221502 ccgacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtcggcatatcagtatccg 34221572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 38442366 - 38442308
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgc 203  Q
    |||||||||||||| |||||| | |||||| ||||||||||| |||| ||||| |||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgtgc 38442308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 39323316 - 39323270
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||||||||||| |||||| ||| ||||| |||||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagc 39323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 4882696 - 4882749
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||| ||||||||||||||||| |||||| | | |||||||||||| ||||||    
T  4882696 cgacatcgacacttgtaattacactgaattatatcattttttcaaataattagc 4882749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 21782833 - 21782890
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgt 217  Q
    |||||||| |||||| ||||||||| ||||||||||||| |||  ||| |||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 28412394 - 28412325
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||| |||||| ||||||||| ||||||||||| | ||| || | ||| |||||||| ||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtc 28412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 35449557 - 35449500
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgt 217  Q
    |||||||| |||||| ||||||||| ||||||||||| | ||| |||| |||||||||    
T  35449557 taattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgt 35449500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 36409642 - 36409711
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||| | |||| ||||||||||||||||||| ||| |||  ||||||| ||| |||| ||||||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||| |||||||||| |||||| ||| ||||| |||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 44860379 - 44860326
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||||||| | |||||||| |||||| || |||||| |||||||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattattagc 44860326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 5473392 - 5473336
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||||||||| |   ||||||  ||||| |||||||||||||||||||||    
T  5473392 gtgtccgacaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 17776708 - 17776648
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgac 154  Q
    |||||||||||||| ||||||| ||| |||  |||||||||| || |||||| ||||||||    
T  17776708 acggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgac 17776648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 18276579 - 18276507
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||   |||||||| ||||||  |||||||| ||||||||||||| |||  ||||| ||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtc 18276507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 174
Target Start/End: Complemental strand, 27460142 - 27460067
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaatt 174  Q
    |||||||||| | ||||| ||||| ||||||| ||| || |||   ||||||||||||| |||||||||||| ||||||    
T  27460142 ggacactccttggattagacgtgtcccggtgttggatacgtgt---gtccgacaccgacccttgtaattacactgaatt 27460067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 28524545 - 28524485
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    ||||||| |||  |||||||||||| | ||||| ||||| |||||||||||||||| ||||    
T  28524545 ggacacttctcagattaggcgtgtttctgtgtcagacacgtgttgtgtccgacaccaacac 28524485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 34337182 - 34337257
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgt 226  Q
    ||||||||||||||||||||     |||| ||||||||||||||||||| | |||||  ||| ||||| |||||| |||||    
T  34337182 gacaccgacacttgtaatta-----aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgt 34337257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 42832277 - 42832329
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||| |||||||| |||| | ||| ||||| |||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagc 42832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 236
Target Start/End: Complemental strand, 13770806 - 13770659
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac-----cgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||     ||||||||||||||||| |||||| ||| ||||||| |    
T  13770806 acggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaattttttta 13770707  T
Q  189 aattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||||||||||||  ||| | |||||||||| |||||||| ||||||    
T  13770706 aattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtc 13770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 24105784 - 24105653
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    ||||||||||  |||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| |||||  ||  ||||||||||||||||||    
T  24105784 acactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaatcatgcaattttttcaaattattag 24105685  T
Q  198 ctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||  ||| |||||||||||| ||||||||    
T  24105684 ctgtgtcggcgtgtcagtgtccgtgtcgtgtc 24105653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 15680919 - 15680794
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||||||||| |||||  ||||||||||||| ||| ||||||||||||||||||| |||||||| | |||| |||||||||||  |||||    
T  15680919 acggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttttttaatta 15680820  T
Q  194 ttagctgtgctggcatgtcagtgtcc 219  Q
    |||||| ||  ||| |||||||||||    
T  15680819 ttagctatgtcggcgtgtcagtgtcc 15680794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 5409780 - 5409892
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgac-----accgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||     |||||||||||||||| || |||||| |||||||||||||    
T  5409780 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttca 5409879  T
Q  189 aattattagctgt 201  Q
    |||||||||||||    
T  5409880 aattattagctgt 5409892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 236
Target Start/End: Complemental strand, 25482012 - 25481870
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||| |||| | |||||| ||||||| |  |||||||||||| | |||||||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  25482012 acggatactctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaatta 25481913  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    |||||||||  ||| ||||| |||||  || ||||| ||||||    
T  25481912 ttagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtc 25481870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 9778615 - 9778502
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac-----cgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||| | ||||||||||| |||||||||||||| |||||||||||||||     ||||||||||||||| | |||||| |||||||||||||    
T  9778615 acggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtgattttttca 9778516  T
Q  189 aattattagctgtg 202  Q
    |||||| |||||||    
T  9778515 aattatcagctgtg 9778502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 21864915 - 21864775
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtga--ttttttcaaattat 194  Q
    ||||||||||||||||| ||||| |||||||||||||| ||| |||||||||| ||||||||||||||||| | |||| | |||  ||||||||||||||    
T  21864915 gacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattat 21864816  T
Q  195 tagctgtgctggcatgtcagtgtccgagtcgtgtcggatgt 235  Q
    ||||||||   |  |||| ||||||| |||||||| |||||    
T  21864815 tagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgt 21864775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 21880262 - 21880158
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||| |||| ||||||||||| | |||||||||||  ||| |||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||    
T  21880262 acggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaatta 21880163  T
Q  194 ttagc 198  Q
    |||||    
T  21880162 ttagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 43027413 - 43027553
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-----cgacaccgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||| ||| ||||||||||| |||||||||||||| ||| |||||     ||||||||||||||||| ||||| || ||| |||||||||||||    
T  43027413 acggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtgattttttca 43027512  T
Q  189 aattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||| |  | | |||||||||||| ||||||||    
T  43027513 aattattagctgggtcgccgtgtcagtgtccgtgtcgtgtc 43027553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 7197273 - 7197354
Alignment:
Q  121 ccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||    
T  7197273 ccggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtg 7197354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 42720850 - 42720943
Alignment:
Q  105 tcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||| ||||||||||||| | |||||||||||||| ||||| ||||| | |||||||| | |||| |||||||||||||||||||||||    
T  42720850 tcgaattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagc 42720943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 24339763 - 24339617
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccg-----------acacttgtaattacaatgaattttgtgatt 182  Q
    |||| ||||||||| ||||||||||| ||||||||||| || ||| |||||||||||||           ||||||||||||||| |||||| |||||||    
T  24339763 acgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatt 24339664  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||  ||| ||||| |||||  ||||||||    
T  24339663 ttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtc 24339617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 229
Target Start/End: Complemental strand, 26733411 - 26733279
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||| ||||| |||||||||||||| || |||||||   || ||||||||||||||||| | |||||| | |||||| ||||||||| |||||||||||    
T  26733411 gacacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattatta 26733312  T
Q  197 gctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    || |||  | | |||||||||||| ||||||||    
T  26733311 gcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 7438764 - 7438693
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgt 217  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||  |||||||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 32093967 - 32094093
Alignment:
Q  98 acactcctcgaattaggcgtgttcc-ggtgtcggacacatgttgtgtccgac-----accgacacttgtaattacaatgaattttgtga-ttttttcaaa 190  Q
    |||||||||| ||||||||||| || |||||||||||| ||| |||||||||     ||||||| ||||||||||| |||||| ||||| ||||||||||    
T  32093967 acactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaa 32094066  T
Q  191 ttattagctgtgctggcatgtcagtgt 217  Q
    ||||||| |||| |||||||| |||||    
T  32094067 ttattagttgtgttggcatgttagtgt 32094093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 8234241 - 8234148
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||  ||||||||||||  ||| ||||||||||||| ||||||||| |||| |||||| ||| |||||||||||||||||| ||||    
T  8234241 attaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtg 8234148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 598318 - 598214
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||| |||| ||||||||||| |||||||||||||| ||| ||||| |||||||||||||  ||||||| | ||||  |||||||| | ||||||    
T  598318 acggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaatta 598219  T
Q  194 ttagc 198  Q
    |||||    
T  598218 ttagc 598214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 11061071 - 11061167
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||| |||||||||||||||||||| | | |||| |||||||||||||||||||||||||||  ||  |||||||||||| ||||| || ||||||    
T  11061071 gtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtc 11061167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 20549901 - 20549797
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||| ||||||||| |||||||||||  |  |||||||||  ||||||||||||||||||||| | |||||||| ||||||  |||||||| ||||||||    
T  20549901 acgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaaatta 20549802  T
Q  194 ttagc 198  Q
    |||||    
T  20549801 ttagc 20549797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 32287412 - 32287516
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||||| |||| |||||||||||||| |||  |||||||||||||||| | || || || |||||| ||||||||| ||| ||||    
T  32287412 acggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagatta 32287511  T
Q  194 ttagc 198  Q
    |||||    
T  32287512 ttagc 32287516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 40287311 - 40287406
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||||| ||| |||||||||||||     ||||||||| ||||||||||||||||||| |||| | | ||||||||||||||||    
T  40287311 acggacactcctcggattaggcatgtcccggtgtcggaca-----tgtgtccgataccgacacttgtaattacactgaa-tatatgattttttcaaatta 40287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 27945100 - 27945016
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||  |||  ||| |||||||||||| ||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtc 27945016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 26033465 - 26033516
Alignment:
Q  149 accgacacttgtaattacaatgaattttgtgattttttcaaattattagctg 200  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgattttttcaaattattagctg 26033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 33994318 - 33994187
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||| | |||||||||||  |||||| |||||  ||| ||||| ||||||||||||||||||| || |||||| |||||  ||||||||||| |||    
T  33994318 acactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtag 33994219  T
Q  198 ctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
     || |  ||| ||||||||| || ||||||||    
T  33994218 ttgcgtcggcgtgtcagtgttcgtgtcgtgtc 33994187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 3991383 - 3991326
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtg 3991326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 18215146 - 18215241
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||  ||||||||||| ||||||||||||||           ||||||||||||||||| |||| || ||| ||||||||||||||||||    
T  18215146 acggacactcctcagattaggcgtgtcccggtgtcggacac-----------gacaccgacacttgtaactacactgcattatgtgattttttcaaatta 18215234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 1401131 - 1401031
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||||||||  |||||| |||| ||| |||||||||  ||| ||||| |||||||| |||| |||||||| |||||| ||||| ||| ||||||||||    
T  1401131 ggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattatt 1401034  T
Q  196 agc 198  Q
    |||    
T  1401033 agc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 9408334 - 9408385
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 19213867 - 19213809
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||||||||||||||||| ||||| || ||| ||||||||||| |||||||||||    
T  19213867 gtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagc 19213809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 28155634 - 28155576
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||||||||||||||||  ||||| ||| ||||| |||||||||||||    
T  28155634 gtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagc 28155576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 19992060 - 19992003
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||| |||||||| |||| | ||||||||| |||||||||||||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtg 19992003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 18039058 - 18039006
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattatta 196  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 1433569 - 1433430
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-----cgacaccgacacttgtaattacaatgaattttgtgattttttca 188  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||  ||||     |||||||||||| | ||||||||   |||  ||||||||| |||    
T  1433569 acggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctca 1433470  T
Q  189 aattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    |||||||| | |||  ||| ||||| |||||| |||||||    
T  1433469 aattattaacggtgtcggcgtgtcaatgtccgtgtcgtgt 1433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 5835353 - 5835254
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    ||||| |||| |||| |||||| ||||| || |||||||||  |||| ||||||||||| | |||||||| |||||| ||| ||||| ||||| ||||||    
T  5835353 acacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattag 5835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 19206108 - 19206025
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||| | |||||| |||||||| ||||||||| ||||||||||||| |||  ||| |||  ||||||| ||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 21560562 - 21560484
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgatttt-----ttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    ||||||||||||||||||||||| |||||| |||||||||     |||||||||||||||||   ||| ||||||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgtgattttttttcttcaaattattagctgtatcggcgtgtcagtgtc 21560484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 27093364 - 27093466
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||||| ||| |||||| |||| |  ||||||||||||||| |||||  |||||||| | | |||||||| | |||| ||||||||| | ||||||||    
T  27093364 ggacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattatt 27093463  T
Q  196 agc 198  Q
    |||    
T  27093464 agc 27093466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 27184937 - 27184835
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||||| ||| |||||| |||| |  ||||||||||||||| |||||  |||||||| | | |||||||| | |||| ||||||||| | ||||||||    
T  27184937 ggacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattatt 27184838  T
Q  196 agc 198  Q
    |||    
T  27184837 agc 27184835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 25822714 - 25822657
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||||| |||||| ||   ||||||||||||||||| ||||    
T  25822714 cgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtg 25822657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 35862023 - 35861966
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||| |||||||  ||||||| |||||| |||||||||||||||||||||| ||||    
T  35862023 cgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtg 35861966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 7058485 - 7058433
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    ||||||| ||||||||||||||| ||||||   ||||||||||||||||||||    
T  7058485 cgacaccaacacttgtaattacactgaattacatgattttttcaaattattag 7058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 9482996 - 9482944
Alignment:
Q  142 gtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattat 194  Q
    ||||||||||||||| | |||||||| |||||| ||||||||| |||||||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 11272586 - 11272637
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaat--tttgtgattttttcaaattat 194  Q
    ||||||||||||||||||||||| |||||  | |||||||||||||||||||    
T  11272586 cgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 11665441 - 11665497
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||| |||||||| |||||| | |||||| |||||||||||||||||||||| ||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtg 11665497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 43250114 - 43250074
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  43250114 acggacactcctcgaattaggcgtgtcctggtgtcggacac 43250074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaa 190  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 13300468 - 13300417
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||| ||| ||||||||| |||||| | ||||||||||||||||||||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 2334309 - 2334256
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgatt--ttttcaaattatta 196  Q
    ||||||||||||||||||||||| | |||| |||||||  ||||||||||||||    
T  2334309 cgacaccgacacttgtaattacactaaattatgtgattttttttcaaattatta 2334256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 3721157 - 3721099
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||||| | |||||| | | |||| ||||||||| |||||||||||||    
T  3721157 gtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 4909217 - 4909159
Alignment:
Q  138 ttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||||| ||||| | | ||||||||||||| ||| ||||| |||||||||||    
T  4909217 ttgtgtccgacactgacacatatgattacaatgaattatgtaattttctcaaattatta 4909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 15902879 - 15902797
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||| | |||||||| | |||| ||||||||| |||||||||||   |||  |||||||||||||| | ||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtc 15902797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 17852110 - 17852056
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgac 148  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||  ||||||||    
T  17852110 acggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 21930687 - 21930614
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    ||||| ||||||||||||||| |||||||| | | ||||||| ||||||||||||| |  ||| |||||||||||    
T  21930687 cgacatcgacacttgtaattaaaatgaattatctaatttttt-aaattattagctgagtcggcgtgtcagtgtcc 21930614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 32308163 - 32308105
Alignment:
Q  161 aattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    ||||||| |||||| ||||||||| ||||||||||||| |||  ||| |||||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 1885632 - 1885587
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaa 190  Q
    |||||||||||||||| |||||| |||||| ||| |||||||||||    
T  1885632 cgacaccgacacttgtgattacattgaattatgtcattttttcaaa 1885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 7973076 - 7973176
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtga--ttttttcaaattatt 195  Q
    |||||||||  ||||| ||||| ||| |||||||||  ||| |||||  ||||| ||| ||||||||||| | |||| |||||  |||||||||||||||    
T  7973076 acactcctcatattagacgtgtcccgatgtcggacatgtgtcgtgtctcacaccaacatttgtaattacattaaattatgtgattttttttcaaattatt 7973175  T
Q  196 a 196  Q
    |    
T  7973176 a 7973176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 11665378 - 11665439
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgaca 155  Q
    ||||||| |||||| |||||  ||||| ||||||||||||| ||| |||| |||||||||||    
T  11665378 acggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgaca 11665439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 38143288 - 38143231
Alignment:
Q  139 tgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||| |||||| |||| | |||||||| | |||| |||||||||||||||||||||    
T  38143288 tgtgtctgacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 2334370 - 2334314
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac 150  Q
    |||||||||||||| ||||| |||||| | ||||||||||  ||| |||||||||||    
T  2334370 acggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 6490826 - 6490786
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||||||| |||| |||||| ||||||||||||||    
T  6490826 acggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 11722122 - 11722182
Alignment:
Q  169 tgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||| ||||||||| ||||||| ||||| |||  ||| |||||||||||| ||||||||    
T  11722122 tgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 11722182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 11831538 - 11831494
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccga 153  Q
    |||||||||| |||||||||  |||||||| ||||||||||||||    
T  11831538 attaggcgtgctccggtgtcaaacacatgtcgtgtccgacaccga 11831494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 14729813 - 14729773
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||||||| |||| |||||| ||||||||||||||    
T  14729813 acggacactcctcggattaagcgtgtcccggtgtcggacac 14729773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 23191960 - 23191880
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||| ||||| || || |||||||||| |||| | ||||||||| ||||||||||||| |||  ||| | ||||||||||    
T  23191960 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccg 23191880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 25956509 - 25956465
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    ||||||||||||||||||||| |||||| |||||| ||| |||||    
T  25956509 gtgtccgacaccgacacttgtgattacattgaattatgtcatttt 25956465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 30813907 - 30813867
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||||||| ||||||||||||| | ||||||||||    
T  30813907 acggacactcctcggattaggcgtgttctgatgtcggacac 30813867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 8908 - 8773
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||| |||||||  |||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||| | |||  | ||||||||||||||||    
T  8908 acggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaatta 8809  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||  ||| |||||||||||| ||||||||    
T  8808 ttagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 8773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 36450706 - 36450829
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||| ||||||||||| | ||||||||||||  || |||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  36450706 gacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattatta 36450805  T
Q  197 gctgtgctggcatgtcagtgtccg 220  Q
    | ||||  ||| ||||||||||||    
T  36450806 gttgtgtcggcgtgtcagtgtccg 36450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 5813702 - 5813576
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||| | || | ||||| ||||||||||||    
T  5813702 acggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaatta 5813603  T
Q  194 ttagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||  ||| |||| |||||||    
T  5813602 ttagctgtgtcggcgtgtccgtgtccg 5813576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 22652097 - 22651951
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac-----------ttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||           ||||||||| | |||||| |||||||    
T  22652097 acggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgatt 22651998  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||  ||| |||||||||||| ||||||||    
T  22651997 ttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 22651951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 40332301 - 40332200
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| |||||||| || ||||||| |||||| ||| |||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  40332301 acggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaatta 40332202  T
Q  194 tt 195  Q
    ||    
T  40332201 tt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 18407829 - 18407705
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    ||||||||||||| |||||||||||| |  ||||||||||  ||| ||||||| || ||||||||||||||||| |||||| |||||||||||  |||||    
T  18407829 acggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttgaatta 18407730  T
Q  194 ttagctgtgctggcatgtcagtgtc 218  Q
    |||||||||  |||||||| |||||    
T  18407729 ttagctgtgtcggcatgtctgtgtc 18407705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 29510242 - 29510388
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac-----------cgacacttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||| |||||| |||| ||||||||||||||  || |||||||||||           ||||||||||||||| | ||||||||||||||    
T  29510242 acggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgatt 29510341  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||  ||| |||||||||||| ||||||||    
T  29510342 ttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 29510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 926737 - 926872
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| || | || ||| |||||||||||||| ||| | ||||||||||||||||| |||||||| ||||   || |||||| ||||||||    
T  926737 acggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaaatta 926836  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||  ||| |||| |||||||||||| ||||||||    
T  926837 ttaggagtgttggcgtgtcagtgtccgtgtcgtgtc 926872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 20873151 - 20873044
Alignment:
Q  122 cggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccga 221  Q
    |||| |||||||| | | |||||||||||||||||||||||||||| | |||| ||||||||||||||||||||| || ||  ||| ||||||||||||     
T  20873151 cggtatcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgt 20873052  T
Q  222 gtcgtgtc 229  Q
    ||||||||    
T  20873051 gtcgtgtc 20873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 8343074 - 8342977
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||      ||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  8343074 gacactcttcggattaggcgtgtcccggtgtcggacacatgta-----cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 20679346 - 20679468
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    ||||||||||||  | |||||||| |||||||||||||| ||||| ||| ||||||||||||| |||||||| |||| | ||||||||| ||||||||||    
T  20679346 ggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttctcaaattatt 20679445  T
Q  196 agctgtgctggcatgtcagtgtc 218  Q
    ||  |||  | ||||||||||||    
T  20679446 aggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 14134809 - 14134706
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||||||||||||||| | |||| ||||||| ||| ||||  ||||||||||  | |||||||| |||||| ||||||||| ||||||||    
T  14134809 acggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaatta 14134710  T
Q  194 ttag 197  Q
    ||||    
T  14134709 ttag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 13436964 - 13437038
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||  ||| |||||||||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 13437038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 4948716 - 4948659
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  4948716 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 25566900 - 25566843
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtg 25566843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 3025661 - 3025557
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||||||| ||||| |||||  | ||||| ||||| ||| ||||||||||| ||||| | |||||||| |||||| ||||||||| ||||||||    
T  3025661 acggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaatta 3025562  T
Q  194 ttagc 198  Q
    |||||    
T  3025561 ttagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 31557104 - 31556985
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    |||||| ||| | ||||||||||| | |||||||||||  ||| ||||| |||||||| ||||||||||||| |||||| ||||| ||||||||||||||    
T  31557104 ggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtga-tttttcaaattatt 31557006  T
Q  196 agctgtgctggcatgtcagtg 216  Q
    | |||||  ||| ||||||||    
T  31557005 aactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 4673426 - 4673516
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||| || ||||||||||||| |||||||| ||||||||||||||||||| |||||  ||| |||||||||| | |||||||| ||||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtc 4673516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 41831886 - 41832012
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacacc-----gacacttgtaattacaatgaattttgtgattttttcaaa 190  Q
    |||||||||||||||||| ||||| | | ||||||| || | | ||||||||||||     |||||||||| ||||| |||||| |||||||||||||||    
T  41831886 ggacactcctcgaattagacgtgtcctgttgtcggatacgtatcgtgtccgacaccaacacgacacttgtagttacactgaattatgtgattttttcaaa 41831985  T
Q  191 ttattagctgtgctggcatgtcagtgt 217  Q
    |||||| |||||  |||||||| ||||    
T  41831986 ttattaactgtgtcggcatgtctgtgt 41832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 22596070 - 22595981
Alignment:
Q  128 cggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgt 217  Q
    ||||||| ||| | |||||||||| ||||||||||||||| |||||| ||| ||||||| |||||||||||||||  ||| |||||||||    
T  22596070 cggacacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 22197680 - 22197826
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacacc-----------gacacttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||  |||||||||| ||||||||||||||| |||  ||||||||||            |||||||||||||||| | |||| ||||| |    
T  22197680 acggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacacgacactgacactgacacttgtaattacactaaattatgtgaat 22197779  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||||| |||| ||| |||||| | ||||||||    
T  22197780 ttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtc 22197826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 30077385 - 30077461
Alignment:
Q  143 tccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtcc 219  Q
    |||||||| |||||||||||||||| |||||| |||||| |||||||||||||||||| | |||| |||| ||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtcc 30077461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 15816129 - 15816204
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||||||| |||||||| | |||| |||||||||||||||||||||| ||||  ||| ||||||||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 15816204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 126296 - 126433
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt--ttcaaat 191  Q
    |||||||||||||| ||||| ||||| ||||| | |||||| ||| ||||||||||| ||||| | |||||||| | |||| |||  ||||  |||||||    
T  126296 acggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattacatttaattgtgttttttttcttcaaat 126395  T
Q  192 tattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||| ||| |||| ||||||| ||||  |||||||    
T  126396 tattagcggtgttggcgtgtcagtatccgtatcgtgtc 126433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 18170478 - 18170564
Alignment:
Q  141 tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtg 227  Q
    ||||||||||||||| ||||||||||| |||||| ||| ||||||||||||| |||  ||||  ||| |||||||||||| ||||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18170564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 18634046 - 18634132
Alignment:
Q  141 tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtg 227  Q
    ||||||||||||||| ||||||||||| |||||| ||| ||||||||||||| |||  ||||  ||| |||||||||||| ||||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 24613584 - 24613523
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||||||||| | |||| ||||| |||||||||||||||||||||    
T  24613584 gtgtccgacaccgacacttgtaattacacttaattatgtga-tttttcaaattattagctgtg 24613523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 2572056 - 2572113
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtg 2572113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 3951485 - 3951577
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttttt 186  Q
    ||||| |||||| | |||||||||||||| ||||| ||||| ||| ||||| ||||||||||| | ||| |||| || |||||||||||||||    
T  3951485 acggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtgatttttt 3951577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 4298887 - 4298943
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||||| |||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtg 4298943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 25192350 - 25192438
Alignment:
Q  148 caccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||||||||| |||||| | |||||| ||| | |||||||||||||||||||||  ||| ||||||||||||  ||||||| ||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtc 25192438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 8343434 - 8343321
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-----------cgacaccgacacttgtaattacaatgaattttgtgattttt 185  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||| |||||           |||||| |||||||||||||||| | |||| ||||||||||    
T  8343434 gacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaattatgtgattttt 8343335  T
Q  186 tcaaattattagct 199  Q
    ||||||||||||||    
T  8343334 tcaaattattagct 8343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 30271291 - 30271366
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||| | |||||||||||||| || ||| |||||||||||||||| ||||||||||  ||| ||||||||||||    
T  30271291 cgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 15023208 - 15023286
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaatt 174  Q
    |||||||||||| ||||| |||||||| |  |||||||| ||| || ||||||| ||||||||||||||||| ||||||    
T  15023208 ggacactcctcggattagacgtgttccagcatcggacacgtgtcgtatccgacatcgacacttgtaattacactgaatt 15023286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 24205757 - 24205819
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||| |||||||||||||||||||| ||||   ||||||| ||||||||||||    
T  24205757 acggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacac 24205819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 37283764 - 37283894
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||| ||||||||| ||||| ||||| |||||    ||||| ||| |||||| |||||||||| |  ||||||| |||||| ||||||||| ||| ||||    
T  37283764 acgggcactcctcggattagacgtgtcccggta---gacacgtgtcgtgtcccacaccgacacat--aattacactgaattatgtgattttctcagatta 37283858  T
Q  194 ttagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||| ||||  ||||||||||||||| ||| ||||    
T  37283859 ttagcggtgcccgcatgtcagtgtccgtgtcatgtc 37283894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 43737760 - 43737850
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttt 184  Q
    |||||||||||| | || |||||| | || ||||| ||||| ||| ||||||||||||||||| | |||||||| || |||||||||||||    
T  43737760 acggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgatttt 43737850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 7442902 - 7442829
Alignment:
Q  147 acaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||| ||||||||||||||| |||||| ||| ||||| | ||||||||||| ||| |||||||| ||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgtccg 7442829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 21465471 - 21465414
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||| |||||||||||||||  ||||| | |||||||||||||||||||||||||    
T  21465471 cgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtg 21465414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 24858122 - 24857984
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac-----cgacacttgtaattacaatgaattttgtga---ttttttcaa 189  Q
    |||||||||  ||||||||||| |||| || |||||||||| |||||||||||     |||||||||| |||||| |||||| |||||   |||||||||    
T  24858122 acactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacacgacaacgacacttgt-attacactgaattatgtgatttttttttcaa 24858024  T
Q  190 attattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||| |||||  ||| ||||  |||||| ||||||||    
T  24858023 attattaactgtgtcggcgtgtccatgtccgtgtcgtgtc 24857984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 29447048 - 29447167
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgaca-----------ccgacacttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||| | ||||||||||| | |||||| ||||||||| ||||||||||           |||||||||||| ||||| |||||| |||||||    
T  29447048 acggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgatt 29447147  T
Q  183 ttttcaaattattagctgtg 202  Q
    || |||||||||||| ||||    
T  29447148 ttctcaaattattagttgtg 29447167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 26434287 - 26434187
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||| || |||||| | |||||  ||||| |||||| | |||||||| |||||||||||| |||||| | |||||| ||||||||| ||||| |||||    
T  26434287 gacacttcttgaattatgtgtgttttggtgttggacacgtattgtgtccaacaccgacacttttaattatattgaattatgtgattttctcaaactatta 26434188  T
Q  197 g 197  Q
    |    
T  26434187 g 26434187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 4498413 - 4498342
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaatta 165  Q
    |||||||||||||  |||||| ||||| |||||||||| ||||||| | | |||||||||||||| ||||||    
T  4498413 acggacactcctctgattaggtgtgtttcggtgtcggatacatgttatattcgacaccgacacttataatta 4498342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 6065595 - 6065650
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgaca 149  Q
    |||||||||||| |||||| ||||||||||||||||||||  ||| ||||||||||    
T  6065595 acggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 34897150 - 34897091
Alignment:
Q  139 tgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||| |||||| | |||||||| |||||| ||||||||| |||||||||||||    
T  34897150 tgtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagc 34897091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 13844591 - 13844649
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||||||||||||| | |||||||| | |||| ||||||||| |||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagc 13844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 29447565 - 29447503
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||  ||||| | ||| |||||||||||||||||| ||||| |||||||||||    
T  29447565 acggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacac 29447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 31236572 - 31236630
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||||| ||||||||| | |||||||| |||||| ||||||||| |||||||||||||    
T  31236572 gtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagc 31236630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 33405333 - 33405435
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatta 193  Q
    |||||||||| | | ||||| ||||| | |||||| ||||  ||| ||||||||||||||||| | |||||||| | |||| |||| |||| ||||||||    
T  33405333 acggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaatta 33405432  T
Q  194 tta 196  Q
    |||    
T  33405433 tta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 4786324 - 4786389
Alignment:
Q  131 acacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||| || |||||||||||||| | |||||||| |||||| ||||||||| | |||||||||    
T  4786324 acacatgtcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 8798804 - 8798844
Alignment:
Q  96 ggacactcctcgaattaggcgtgttccggtgtcggacacat 136  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  8798804 ggacactccttggattaggcgtgttccggtgtcggacacat 8798844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 22943301 - 22943349
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtcc 145  Q
    ||||||||||| ||||||||||| |||||||||||||| ||| ||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 24669492 - 24669408
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||||||||| |||||| ||| ||||  ||||||||||| | |||   || |||||||||| | ||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtc 24669408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 36934714 - 36934646
Alignment:
Q  160 taattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    ||||||||||||||| |||||||||||| |||||||||| |||  | | ||| |||||||| |||||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 41838131 - 41838207
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||| || || |||||| ||||||||||| |||||||||||||||  | | ||||||||||||  |||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 41838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 44067637 - 44067597
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacac 134  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  44067637 acggacactcctcgaattaggcgtgtcctggtgtcggacac 44067597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 11927086 - 11927137
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||||| | |||||||| |||||| ||||||||| |||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 16988023 - 16987920
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgtt-gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaatt 192  Q
    |||||||||||||| |||||| |||| ||||||| || |||||||| |||| |||||  ||||| | | ||| || ||||||  |||||||| |||||||    
T  16988023 acggacactcctcggattaggggtgtcccggtgttgggcacatgttggtgtgcgacattgacacatatgattgcattgaattacgtgattttctcaaatt 16987924  T
Q  193 atta 196  Q
    ||||    
T  16987923 atta 16987920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 27067240 - 27067300
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||| ||||| |||  ||||||||  ||||||||| |||||||||||||||||    
T  27067240 acggacactcctcggattagacgt--tccggtgttcgacacatgtcgtgtccgacaccgacac 27067300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 28384995 - 28385077
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgt 228  Q
    ||||||||||| | |||||||| |||||| || ||||| |||| ||||||| | |||  || ||||||||||||| |||||||    
T  28384995 gacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgt 28385077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 34450970 - 34451032
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||| | || |||||||| || ||||| ||||| ||| |||||||||||||||||    
T  34450970 acggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 12606825 - 12606882
Alignment:
Q  141 tgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||| ||||||||||| | |||||||| |||||| | ||||||| |||||||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagc 12606882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 12985457 - 12985400
Alignment:
Q  139 tgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||||||||||  | | |||||| |||||| ||||||||| |||||||||||    
T  12985457 tgtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 16641921 - 16641974
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac 150  Q
    ||||||||||| |||||| |||| |||||||  ||||||||| |||||||||||    
T  16641921 gacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 28745557 - 28745504
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||| ||||| ||||| ||||| |||||| ||||| |||||||||||||||||    
T  28745557 cgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattagc 28745504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 3677854 - 3677794
Alignment:
Q  136 tgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||||||| ||||||| || | ||||||||  ||||| ||||||||||| |||||||||    
T  3677854 tgttgtgtccaacaccgatacatataattacatagaattatgtgattttttaaaattatta 3677794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 21465533 - 21465477
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacac 150  Q
    ||||||||||||| |||||||||| | || |||| |||||| ||| |||||||||||    
T  21465533 acggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacac 21465477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 24413508 - 24413644
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttc-aaatt 192  Q
    ||||||||| |||| ||||| ||||| ||| ||| ||||||   | ||||||||||| ||||||| |||||||  |||||| |||  |||| || |||||    
T  24413508 acggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatgtatttttctcaaaatt 24413607  T
Q  193 attagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||| | |||   | ||||||||||||| ||||||||    
T  24413608 attaacggtgtcagtatgtcagtgtccgtgtcgtgtc 24413644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 28819306 - 28819250
Alignment:
Q  100 actcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||| ||||| ||||||||||||| ||| |||| | ||||| |||||||||||    
T  28819306 actcctcggattagccgtgttccggtgttggatacatatcgtgtctgacaccgacac 28819250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 70384 - 70280
Alignment:
Q  98 acactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||| ||| ||||||| ||| | |||||||||||| ||| ||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||     
T  70384 acactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaa 70285  T
Q  198 ctgtg 202  Q
    |||||    
T  70284 ctgtg 70280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 20231 - 20147
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||  ||| ||||| |||||| ||||||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtc 20147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 14622 - 14532
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||  ||||||||||||| ||| ||||||||||||   ||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  14622 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc---acttgtaattacactgaattatgtgattttttcaaattattagttgtg 14532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 46741 - 46650
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcggatgtc 236  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||  ||| ||||| |||||| |||||||| ||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtc 46650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 4830 - 4941
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtcc--gacaccgacacttgtaattacaatgaattttgtga-ttttttcaaa 190  Q
    |||||||||||||| ||||||||||| || ||||||||||  ||| |||| |  |||||| ||||||||||||||| |||||| ||||| |||||| |||    
T  4830 acggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattttttttaaa 4929  T
Q  191 ttattagctgtg 202  Q
    ||||||||||||    
T  4930 ttattagctgtg 4941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 241715 - 241569
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacacc-----------gacacttgtaattacaatgaattttgtgatt 182  Q
    ||||||||| |||| ||||||||||| |||||||||||||| ||| ||||||||||||           ||||||  |||||||| | |||| |||||||    
T  241715 acggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatt 241616  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||| ||||||||||||||||  ||| |||||||||||| ||||||||    
T  241615 tttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 241569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 51862 - 51795
Alignment:
Q  153 acacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||  ||| ||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 51795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 130538 - 130457
Alignment:
Q  148 caccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||  ||| ||||| |||||| ||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtc 130457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 71843 - 71709
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccg-----------acacttgtaattacaatgaattttgtga--ttt 183  Q
    ||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||           ||||| ||||||||| |||||| |||||  |||    
T  71843 gacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttt 71744  T
Q  184 tttcaaattattagctgtgctggcatgtcagtgtc 218  Q
    |||||||||||||||||||  ||| ||||||||||    
T  71743 tttcaaattattagctgtgtcggcgtgtcagtgtc 71709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 178819 - 178903
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttg-tgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||  ||| |||||||||||| ||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 178903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 192256 - 192333
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    ||||||||||||||||  ||||| ||| ||||| ||||||||||| | |||  ||| ||||||||||||  |||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtc 192333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 7023 - 7089
Alignment:
Q  136 tgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||| ||||||||||||| | | |||| ||| |||||||||||||||||||||||    
T  7023 tgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtg 7089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 3849 - 3934
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtcg 230  Q
    |||||| |||||||||||||||| |||||| ||||||||||| ||||||||| | |||  ||||| |||||||| | |||||||||    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtcg 3934  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 174517 - 174594
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttttt 186  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||| ||||||||||  |||||| ||| |||||||    
T  174517 attaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgtcatttttt 174594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 180030 - 180107
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgatttttt 186  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||| ||||||||||  |||||| ||| |||||||    
T  180030 attaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgtcatttttt 180107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 263372 - 263453
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgt 226  Q
    |||||| ||||||| |||||||| |||||| |||| |||| ||||||||||||| ||| || |||||||||||||| |||||    
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgt 263453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 8573 - 8707
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtc-----------cgacaccgacacttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||||||||||||||| || ||||||||||| | | |||||           ||||||||||| ||||||||| |  ||||| ||||||     
T  8573 acggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaattatgtgata 8672  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgt 217  Q
    ||||||||||||||| ||||  |||||||||||||    
T  8673 ttttcaaattattagttgtgtcggcatgtcagtgt 8707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 13460 - 13384
Alignment:
Q  144 ccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||| ||||||||| || |||||| ||||||||| |||||||||||| ||||  ||| ||||||||||||    
T  13460 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccg 13384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 19682 - 19551
Alignment:
Q  102 tcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccg-----acacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    |||||| |||| | ||||| ||||||||||||| ||| |||||| ||||||     ||||||||||||||| |||||| ||||| |||||||||||||||    
T  19682 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtga-tttttcaaattatta 19584  T
Q  197 gctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    | |||   ||| |||||||||| | ||||||||    
T  19583 gttgtatcggcgtgtcagtgtcagtgtcgtgtc 19551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 21867 - 21943
Alignment:
Q  144 ccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    ||||||||||| ||||||||| || |||||| ||||||||| |||||||||||| ||||  ||| ||||||||||||    
T  21867 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccg 21943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 90938 - 90818
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggca 208  Q
    ||||||||||||  |||||||||||| ||||||||| |||| |||||  | |||||||| |||||| | ||||||| |||||||||||   ||| |||      
T  90938 attaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtg 90839  T
Q  209 tgtcagtgtccgagtcgtgtc 229  Q
    |||||||||| | ||||||||    
T  90838 tgtcagtgtctgtgtcgtgtc 90818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 17750 - 17806
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtg 17806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 123686 - 123612
Alignment:
Q  146 gacaccgacacttgtaattacaatgaattttgtga---ttttttcaaattattagctgtgctggcatgtcagtgt 217  Q
    |||||||||||||||||||||| |||||| |||||   |||||| ||||||||||||||| |||| |||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtgt 123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 92859 - 92791
Alignment:
Q  152 gacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccg 220  Q
    |||||||||||||||| |||||| ||| ||||| ||||||||||||| |||  ||| ||||||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccg 92791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 92932 - 92875
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacacc 151  Q
    |||||||||||||| ||||||||||| | |||||| ||||  ||| ||||||||||||    
T  92932 acggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 4988 - 5058
Alignment:
Q  97 gacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattaca 167  Q
    ||||||||||| ||||||| |||  |  |||||||||| ||| ||||||||||||||||||||||||||||    
T  4988 gacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 3049 - 2987
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacac 156  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||| ||||| || ||||||||    
T  3049 acggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 23829 - 23771
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgatt-ttttcaaattattagctgtg 202  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtg 23771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 202
Target Start/End: Complemental strand, 8104 - 8012
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    |||||| |||||| | | ||| ||| |||| ||||||||||||||||||| |||||||| || ||| | |||||||||||||||||||| ||||    
T  8104 attaggtgtgttctgatatcgaacatatgtcgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtg 8012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 45494 - 45559
Alignment:
Q  109 attaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaatt 174  Q
    ||||||| |||  ||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  45494 attaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaatt 45559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 23479 - 23395
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    |||||||||||||| |||||||| |||||| |||||||||||  | |||||| |||||  ||| |||||||||| | ||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtc 23395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 229
Target Start/End: Original strand, 225206 - 225352
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgtt-gtgtccgacac----------cgacacttgtaattacaatgaattttgtgatt 182  Q
    |||||||||||||||||||||||||| | ||||||| ||||  ||  |||||||||||          |||||||| |||||||| || ||| ||| |||    
T  225206 acggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgacacgacaccaacacgacacttataattacattgtattatgtcatt 225305  T
Q  183 ttttcaaattattagctgtgctggcatgtcagtgtccgagtcgtgtc 229  Q
    || ||||||||||| |||||  ||| |||||||||||| ||||||||    
T  225306 ttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtc 225352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 3418 - 3336
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaatttt 176  Q
    |||||||||||||| ||||||||||| || |||||   ||| |||  |||||||||| |||||||||||||||| | ||||||    
T  3418 acggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatttt 3336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 63837 - 63779
Alignment:
Q  140 gtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    ||||| ||||||||||||||||||| || |||||| ||| ||||| |||||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagc 63779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 33375 - 33420
Alignment:
Q  157 ttgtaattacaatgaattttgtgattttttcaaattattagctgtg 202  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtg 33420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 24146 - 24083
Alignment:
Q  94 acggacactcctcgaattaggcgtgttccggtgtcggacaca--tgttgtgtccgacaccgacac 156  Q
    |||||||||| ||| ||||||||||| || ||||||||||||  |||||||||||||||||||||    
T  24146 acggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacac 24083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 53236 - 53189
Alignment:
Q  148 caccgacacttgtaattacaatgaattttgtgattttttcaaattatt 195  Q
    ||||||||||| |||||||| |||||| ||||||||| ||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 135312 - 135365
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattagc 198  Q
    |||||||||||| | ||||||||  ||||| ||||||||| |||||||||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagc 135365  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 1724 - 1652
Alignment:
Q  124 gtgtcggacacatgttgtgtccgacaccgacacttgtaattacaatgaattttgtgattttttcaaattatta 196  Q
    ||||||||||  ||| ||||||||||||||||||| |||||| |   |||| | ||||||| |||||||||||    
T  1724 gtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 1652  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 9747 - 9799
Alignment:
Q  145 cgacaccgacacttgtaattacaatgaattttgtgattttttcaaattattag 197  Q
    |||||||||||| | |||||||| ||||||  |||||||| ||||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

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