View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13644_high_4 (Length: 401)

Name: NF13644_high_4
Description: NF13644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13644_high_4
NF13644_high_4
[»] chr6 (25 HSPs)
chr6 (14-96)||(1829598-1829680)
chr6 (14-96)||(7316289-7316371)
chr6 (17-121)||(10784592-10784696)
chr6 (14-96)||(7314904-7314985)
chr6 (17-96)||(8659289-8659368)
chr6 (17-96)||(10785911-10785990)
chr6 (17-96)||(8821897-8821976)
chr6 (17-96)||(16704495-16704574)
chr6 (24-96)||(8822798-8822870)
chr6 (17-96)||(3721636-3721715)
chr6 (18-93)||(27322067-27322142)
chr6 (17-96)||(27437852-27437931)
chr6 (17-96)||(34834577-34834656)
chr6 (27-88)||(14822392-14822453)
chr6 (17-96)||(26574643-26574721)
chr6 (17-96)||(26575052-26575131)
chr6 (19-95)||(12350823-12350898)
chr6 (17-96)||(8660202-8660280)
chr6 (14-92)||(12382706-12382784)
chr6 (27-121)||(14823583-14823677)
chr6 (25-95)||(34830927-34830997)
chr6 (17-88)||(3333024-3333095)
chr6 (18-93)||(27318341-27318418)
chr6 (39-96)||(3722527-3722584)
chr6 (17-57)||(5658819-5658859)
[»] chr8 (34 HSPs)
chr8 (14-96)||(10006368-10006450)
chr8 (14-96)||(5514005-5514087)
chr8 (14-96)||(22221359-22221441)
chr8 (14-96)||(22227701-22227783)
chr8 (17-96)||(18978043-18978122)
chr8 (14-96)||(10007758-10007840)
chr8 (17-96)||(18979118-18979197)
chr8 (17-96)||(29968335-29968414)
chr8 (14-96)||(1824073-1824155)
chr8 (14-96)||(1858518-1858600)
chr8 (14-96)||(22220412-22220494)
chr8 (14-96)||(30335663-30335745)
chr8 (17-96)||(12353359-12353437)
chr8 (17-96)||(18970934-18971013)
chr8 (17-96)||(24488678-24488756)
chr8 (18-96)||(8388486-8388564)
chr8 (14-88)||(32207320-32207394)
chr8 (16-96)||(1823576-1823656)
chr8 (16-96)||(1858021-1858101)
chr8 (25-96)||(12351945-12352016)
chr8 (14-96)||(24123893-24123975)
chr8 (17-96)||(11282032-11282111)
chr8 (17-96)||(11287800-11287879)
chr8 (14-96)||(2379919-2379999)
chr8 (14-96)||(24122906-24122988)
chr8 (14-88)||(43661297-43661371)
chr8 (16-130)||(32973933-32974046)
chr8 (16-96)||(32968480-32968560)
chr8 (17-96)||(11283207-11283286)
chr8 (17-96)||(38974819-38974898)
chr8 (17-96)||(38980042-38980121)
chr8 (17-96)||(39005917-39005996)
chr8 (17-96)||(39011139-39011218)
chr8 (14-96)||(30336496-30336578)
[»] chr7 (27 HSPs)
chr7 (14-96)||(7501847-7501929)
chr7 (14-88)||(18372452-18372526)
chr7 (17-125)||(31659618-31659726)
chr7 (17-88)||(3227139-3227210)
chr7 (17-96)||(47525365-47525444)
chr7 (14-96)||(18371448-18371530)
chr7 (14-88)||(22629518-22629592)
chr7 (14-96)||(47369805-47369887)
chr7 (24-96)||(17782558-17782630)
chr7 (17-96)||(3227592-3227671)
chr7 (17-88)||(31949354-31949425)
chr7 (14-96)||(7500478-7500560)
chr7 (14-92)||(14999150-14999228)
chr7 (17-96)||(17781685-17781764)
chr7 (17-96)||(31949800-31949879)
chr7 (14-96)||(21505438-21505520)
chr7 (14-96)||(22630447-22630529)
chr7 (14-96)||(42886281-42886363)
chr7 (24-96)||(127360-127431)
chr7 (17-96)||(128599-128678)
chr7 (19-96)||(11658403-11658480)
chr7 (25-94)||(34351518-34351587)
chr7 (46-96)||(47524549-47524599)
chr7 (17-96)||(11662549-11662628)
chr7 (14-52)||(14998048-14998086)
chr7 (38-96)||(43900507-43900565)
chr7 (48-96)||(20163585-20163633)
[»] chr4 (44 HSPs)
chr4 (14-96)||(1835097-1835179)
chr4 (6-96)||(13509346-13509436)
chr4 (17-127)||(31600983-31601092)
chr4 (17-96)||(19750573-19750652)
chr4 (17-96)||(19789154-19789233)
chr4 (14-96)||(12129647-12129729)
chr4 (17-96)||(31599813-31599892)
chr4 (14-92)||(21539066-21539144)
chr4 (17-96)||(5526124-5526203)
chr4 (17-96)||(8758835-8758914)
chr4 (17-96)||(10471386-10471465)
chr4 (17-96)||(48780272-48780351)
chr4 (24-96)||(26421627-26421699)
chr4 (14-96)||(1834143-1834226)
chr4 (17-96)||(5525383-5525462)
chr4 (17-96)||(25685820-25685899)
chr4 (37-96)||(49308045-49308104)
chr4 (14-92)||(50909667-50909746)
chr4 (14-96)||(1290193-1290275)
chr4 (14-96)||(37728560-37728642)
chr4 (14-96)||(8155760-8155843)
chr4 (17-96)||(8757698-8757777)
chr4 (14-121)||(10447006-10447113)
chr4 (17-96)||(25684958-25685037)
chr4 (25-96)||(35935539-35935610)
chr4 (17-121)||(13386530-13386634)
chr4 (17-96)||(1963220-1963299)
chr4 (17-96)||(10470570-10470649)
chr4 (17-96)||(17383016-17383095)
chr4 (17-96)||(35934366-35934445)
chr4 (18-96)||(1964440-1964518)
chr4 (19-96)||(27257960-27258037)
chr4 (16-96)||(3928855-3928935)
chr4 (25-88)||(13386047-13386111)
chr4 (20-96)||(17388212-17388288)
chr4 (17-130)||(33310087-33310196)
chr4 (17-96)||(52491605-52491684)
chr4 (14-88)||(10448255-10448329)
chr4 (43-96)||(3927690-3927743)
chr4 (18-93)||(14868916-14868990)
chr4 (18-93)||(14876944-14877018)
chr4 (17-96)||(48781044-48781122)
chr4 (40-95)||(49306799-49306854)
chr4 (14-96)||(1289121-1289203)
[»] chr1 (41 HSPs)
chr1 (14-96)||(51684390-51684472)
chr1 (14-126)||(45148576-45148686)
chr1 (17-96)||(36613902-36613981)
chr1 (17-96)||(24422824-24422903)
chr1 (14-96)||(45149965-45150048)
chr1 (14-88)||(45157204-45157278)
chr1 (14-123)||(39222468-39222577)
chr1 (17-96)||(7983073-7983152)
chr1 (17-96)||(24426073-24426152)
chr1 (17-96)||(41364852-41364931)
chr1 (14-96)||(7675454-7675536)
chr1 (14-96)||(11436066-11436148)
chr1 (14-96)||(35594241-35594321)
chr1 (14-96)||(37526873-37526954)
chr1 (14-96)||(43058809-43058891)
chr1 (14-88)||(50680363-50680437)
chr1 (14-96)||(51685760-51685842)
chr1 (16-96)||(23980463-23980543)
chr1 (17-88)||(33088615-33088686)
chr1 (17-96)||(39699765-39699844)
chr1 (25-96)||(52274992-52275063)
chr1 (17-96)||(52827371-52827450)
chr1 (17-88)||(52828068-52828139)
chr1 (14-96)||(11437194-11437276)
chr1 (14-88)||(39151963-39152037)
chr1 (14-88)||(39153111-39153185)
chr1 (14-96)||(43060001-43060083)
chr1 (14-96)||(35595187-35595270)
chr1 (17-85)||(44411964-44412032)
chr1 (17-96)||(41366129-41366207)
chr1 (14-96)||(43378708-43378790)
chr1 (14-96)||(44404466-44404548)
chr1 (43-96)||(14999308-14999361)
chr1 (17-88)||(35067000-35067071)
chr1 (25-96)||(39698587-39698657)
chr1 (43-96)||(7674551-7674603)
chr1 (17-96)||(52276161-52276240)
chr1 (18-96)||(33088091-33088169)
chr1 (14-96)||(36612877-36612958)
chr1 (47-96)||(14999983-15000032)
chr1 (11-96)||(46066547-46066631)
[»] scaffold0019 (2 HSPs)
scaffold0019 (14-96)||(60114-60196)
scaffold0019 (14-88)||(61454-61528)
[»] chr5 (33 HSPs)
chr5 (14-96)||(18486897-18486979)
chr5 (14-96)||(25523093-25523175)
chr5 (14-96)||(16650850-16650932)
chr5 (14-96)||(19752935-19753017)
chr5 (25-96)||(25056387-25056458)
chr5 (17-96)||(36486486-36486565)
chr5 (14-96)||(19754125-19754207)
chr5 (24-88)||(33160291-33160355)
chr5 (17-96)||(5777923-5778002)
chr5 (17-96)||(5778834-5778913)
chr5 (17-96)||(28538700-28538779)
chr5 (17-96)||(28539818-28539897)
chr5 (14-96)||(22940618-22940699)
chr5 (14-96)||(18485162-18485251)
chr5 (14-88)||(24332945-24333019)
chr5 (30-96)||(33158122-33158188)
chr5 (14-83)||(25055449-25055518)
chr5 (14-79)||(25524093-25524158)
chr5 (14-91)||(42195161-42195238)
chr5 (17-92)||(1797295-1797370)
chr5 (17-92)||(40255670-40255745)
chr5 (17-88)||(5730860-5730931)
chr5 (25-96)||(7311614-7311685)
chr5 (43-121)||(25524151-25524229)
chr5 (43-96)||(1796078-1796131)
chr5 (16-96)||(1015508-1015588)
chr5 (17-77)||(21835083-21835143)
chr5 (14-69)||(16650043-16650098)
chr5 (17-96)||(20214219-20214298)
chr5 (14-96)||(2686396-2686478)
chr5 (39-121)||(5730441-5730523)
chr5 (46-96)||(34893689-34893739)
chr5 (40-96)||(18154518-18154573)
[»] chr3 (49 HSPs)
chr3 (18-96)||(24516484-24516562)
chr3 (14-96)||(47614209-47614291)
chr3 (17-96)||(29932697-29932775)
chr3 (17-96)||(29981851-29981929)
chr3 (17-96)||(47610578-47610657)
chr3 (17-96)||(54540788-54540867)
chr3 (14-96)||(12700197-12700279)
chr3 (14-88)||(19984881-19984955)
chr3 (25-96)||(7267667-7267738)
chr3 (14-130)||(7758393-7758508)
chr3 (17-96)||(29931250-29931329)
chr3 (17-96)||(29980404-29980483)
chr3 (17-96)||(52840602-52840681)
chr3 (17-96)||(55191993-55192072)
chr3 (14-96)||(12703495-12703577)
chr3 (16-96)||(22776809-22776889)
chr3 (17-130)||(51469963-51470075)
chr3 (17-96)||(7268825-7268904)
chr3 (17-96)||(47609721-47609800)
chr3 (14-88)||(19986065-19986141)
chr3 (24-96)||(535787-535859)
chr3 (16-96)||(46719965-46720045)
chr3 (25-88)||(8456509-8456572)
chr3 (14-93)||(31645000-31645079)
chr3 (14-88)||(534531-534605)
chr3 (14-96)||(11671336-11671418)
chr3 (14-88)||(49216279-49216353)
chr3 (16-96)||(46721217-46721297)
chr3 (18-93)||(5029682-5029757)
chr3 (17-96)||(18442655-18442734)
chr3 (23-126)||(18456067-18456170)
chr3 (17-96)||(19487729-19487808)
chr3 (17-96)||(28263109-28263188)
chr3 (17-96)||(51038788-51038867)
chr3 (17-96)||(54539779-54539858)
chr3 (14-96)||(34019140-34019222)
chr3 (16-88)||(11670416-11670488)
chr3 (17-96)||(28262216-28262295)
chr3 (17-96)||(51037559-51037638)
chr3 (17-96)||(51470453-51470532)
chr3 (14-88)||(23770402-23770476)
chr3 (62-96)||(47615591-47615625)
chr3 (14-88)||(54987002-54987076)
chr3 (17-87)||(55191544-55191613)
chr3 (16-81)||(8875945-8876010)
chr3 (17-82)||(52276342-52276407)
chr3 (17-82)||(52281545-52281610)
chr3 (45-93)||(5001227-5001275)
chr3 (14-50)||(47615572-47615608)
[»] chr2 (35 HSPs)
chr2 (14-121)||(18797246-18797353)
chr2 (14-96)||(22587949-22588030)
chr2 (17-96)||(36449802-36449881)
chr2 (14-96)||(18299397-18299479)
chr2 (14-96)||(28617946-28618027)
chr2 (14-91)||(23869530-23869607)
chr2 (17-96)||(7898715-7898794)
chr2 (17-96)||(11258809-11258888)
chr2 (17-96)||(22848215-22848294)
chr2 (17-96)||(38840491-38840570)
chr2 (17-82)||(41878132-41878197)
chr2 (17-88)||(38839274-38839345)
chr2 (14-96)||(18300720-18300801)
chr2 (14-96)||(18905983-18906064)
chr2 (14-96)||(24475248-24475330)
chr2 (23-96)||(7899886-7899959)
chr2 (25-96)||(1034475-1034546)
chr2 (36-95)||(24476861-24476920)
chr2 (14-96)||(18904391-18904473)
chr2 (16-88)||(802588-802660)
chr2 (16-88)||(810778-810850)
chr2 (17-96)||(8535654-8535733)
chr2 (17-96)||(11257646-11257724)
chr2 (17-96)||(36450919-36450998)
chr2 (17-88)||(41879210-41879281)
chr2 (14-96)||(13030314-13030395)
chr2 (14-96)||(22587525-22587606)
chr2 (38-96)||(32739647-32739705)
chr2 (43-88)||(13568004-13568049)
chr2 (43-96)||(18868948-18869001)
chr2 (14-94)||(26545516-26545596)
chr2 (17-96)||(1033234-1033312)
chr2 (17-96)||(11938787-11938865)
chr2 (25-79)||(1091736-1091790)
chr2 (62-96)||(21837298-21837332)
[»] scaffold0302 (2 HSPs)
scaffold0302 (17-96)||(17494-17573)
scaffold0302 (17-96)||(18774-18853)
[»] scaffold1303 (1 HSPs)
scaffold1303 (14-96)||(1463-1545)
[»] scaffold0320 (1 HSPs)
scaffold0320 (14-88)||(19520-19594)
[»] scaffold0294 (1 HSPs)
scaffold0294 (23-88)||(5442-5507)
[»] scaffold0045 (1 HSPs)
scaffold0045 (44-96)||(49109-49161)
[»] scaffold0003 (1 HSPs)
scaffold0003 (17-96)||(49431-49510)
[»] scaffold2034 (2 HSPs)
scaffold2034 (16-96)||(257-337)
scaffold2034 (16-96)||(975-1055)
[»] scaffold0186 (2 HSPs)
scaffold0186 (17-96)||(23887-23967)
scaffold0186 (17-96)||(23103-23182)
[»] scaffold0059 (2 HSPs)
scaffold0059 (17-96)||(4728-4807)
scaffold0059 (25-96)||(3699-3770)
[»] scaffold0632 (1 HSPs)
scaffold0632 (17-94)||(3306-3383)
[»] scaffold0112 (1 HSPs)
scaffold0112 (23-88)||(37179-37244)
[»] scaffold0227 (1 HSPs)
scaffold0227 (17-126)||(117-225)
[»] scaffold0049 (1 HSPs)
scaffold0049 (17-77)||(7413-7473)
[»] scaffold0586 (1 HSPs)
scaffold0586 (14-77)||(6386-6449)
[»] scaffold0093 (2 HSPs)
scaffold0093 (26-88)||(2472-2534)
scaffold0093 (26-88)||(7095-7157)


Alignment Details
Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 1829598 - 1829680
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  1829598 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagtta 1829680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 7316289 - 7316371
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||||||||||| ||||||||| ||||  ||| |||||||||||||||||||||||||| |||||||    
T  7316289 agatgcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagtttttgaaagtta 7316371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 10784696 - 10784592
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactt 116  Q
    |||||||||||||||||||  |||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||        ||||||||||||    
T  10784696 tgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactt 10784597  T
Q  117 tagcc 121  Q
    |||||    
T  10784596 tagcc 10784592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 7314985 - 7314904
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||    
T  7314985 agatgcaaaggggctaaatcttagggggtcaaaattgttgttttgatactta-ggggccaaaattgcaagtttttgaaagtta 7314904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 8659368 - 8659289
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  8659368 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta 8659289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 10785911 - 10785990
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||||||||  ||||||||||||||  |||||||||||  |||||||||| |||||||||||||    
T  10785911 tgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagtta 10785990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 8821976 - 8821897
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| || ||||||||||| |||||| ||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  8821976 tgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta 8821897  T

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Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 16704495 - 16704574
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||| ||||||||||||| ||  |||||||||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  16704495 tgcaaagaggctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtta 16704574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 8822798 - 8822870
Alignment:
Q  24 gggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||| |||||| ||||||| |||||  ||||||||||| ||||||||||||||||| |||||||    
T  8822798 gggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta 8822870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 3721715 - 3721636
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||||||||||| | ||||| | |||||  ||||||||||| ||||||||||||||||| |||||||    
T  3721715 tgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaagtttttgaaagtta 3721636  T

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Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 27322067 - 27322142
Alignment:
Q  18 gcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaag 93  Q
    ||||||||||||| ||||| ||||| |||||||| |||||  |||||||||||||||||||||||| |||| ||||    
T  27322067 gcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgcaagattttgaaag 27322142  T

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Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 27437931 - 27437852
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| ||||||||||| |||| ||||||||||||||| ||   ||||||||||||||||||| ||||| |||||||    
T  27437931 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagtta 27437852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 34834577 - 34834656
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| ||||| ||||||||| |  ||||||||||||||||| |||||||    
T  34834577 tgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaagtttttgaaagtta 34834656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 14822453 - 14822392
Alignment:
Q  27 ctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||| |||| ||||||||||||||  ||||||| ||||||||||||||||||||||    
T  14822453 ctaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagttttt 14822392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 26574721 - 26574643
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||||  |||||| ||||||||  ||||||| ||  ||||||||||||||||| |||||||    
T  26574721 tgcaaaggggctaaatcttaagggatcaaaat-gtagtttttgtacttagaggttcaaaattgcaagtttttgaaagtta 26574643  T

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Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 26575052 - 26575131
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| | ||||||||| |||| |||||||||||||||  |||||| ||||  |||||||||||||||| |||||||    
T  26575052 tgcaaaggagttaaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttgaaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 12350898 - 12350823
Alignment:
Q  19 caaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtt 95  Q
    |||||||||||||||||| ||||  |||||||||||||| |||| || |||| ||||||||||||||| | ||||||    
T  12350898 caaaggggctaaatcttagggggttaaaattgtagtttttatacata-ggggtcaaaattgcaagtttattaaagtt 12350823  T

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Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 8660202 - 8660280
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| || ||||||||||| |||||| ||||||| |||||  |||||| |||| ||||||||||||||||| |||||||    
T  8660202 tgcaatggagctaaatcttaggggggctaaattgtggttttggtactta-ggggtcaaaattgcaagtttttgaaagtta 8660280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 12382706 - 12382784
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaa 92  Q
    ||||||||| ||| ||||||||  |||  ||||||| ||||||| |||||||||||| ||||||| ||| |||||||||    
T  12382706 agatgcaaaagggttaaatctttggggatcaaaattatagttttaatacttagggggtcaaaattacaaatttttaaaa 12382784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 14823583 - 14823677
Alignment:
Q  27 ctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactttagcc 121  Q
    |||||||||| |||| ||||||||||||||   |||||| ||||| |||||||||||||||| ||| |||        |||||||||||||||||    
T  14823583 ctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagcc 14823677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 34830997 - 34830927
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtt 95  Q
    |||||||||||| |||||| ||||||| |||||  ||||||||||||||||  ||||| ||||| ||||||    
T  34830997 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaatatgcaaatttttgaaagtt 34830927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 3333024 - 3333095
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||||||| |||  |||  ||||||||||||||  ||| |||||||||||||| |||| |||||    
T  3333024 tgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaacttttt 3333095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 27318418 - 27318341
Alignment:
Q  18 gcaaaggggctaaatcttaagggggca--aaattgtagttttcatacttagggggccaaaattgcaagtttttaaaag 93  Q
    ||||||||||||| ||||| |||||    ||||||| |||||  |||||||||||||||||||||||| |||| ||||    
T  27318418 gcaaaggggctaattcttaggggggggggaaattgtggttttggtacttagggggccaaaattgcaagattttgaaag 27318341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 3722527 - 3722584
Alignment:
Q  39 ggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||| |||||  ||||||| ||| ||||||||||||||||| |||||||    
T  3722527 ggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagtta 3722584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 5658859 - 5658819
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagtttt 57  Q
    |||||| |||||||||||||||||  |||||||||||||||    
T  5658859 tgcaaatgggctaaatcttaagggatcaaaattgtagtttt 5658819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 10006450 - 10006368
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  10006450 agatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagtta 10006368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 5514087 - 5514005
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||||||||| |||||||| |||||||    
T  5514087 agatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattggaagtttttgaaagtta 5514005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22221359 - 22221441
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  22221359 agatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagtta 22221441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22227701 - 22227783
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  22227701 agatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagtta 22227783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 18978122 - 18978043
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||| |||| |||||||    
T  18978122 tgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtta 18978043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 10007758 - 10007840
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||  ||||||||| ||||  |||||||||||||||||||||||||||||| |||||||    
T  10007758 agatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagtta 10007840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 18979118 - 18979197
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||| |||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||||| || |||||||    
T  18979118 tgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttgaaagtta 18979197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 29968335 - 29968414
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||  || ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  29968335 tgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtta 29968414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 1824073 - 1824155
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||  |||||||||||| |||| |||||||||||||||  |||||||||| |||||||||||||||||| |||||||    
T  1824073 agatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagtta 1824155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 1858518 - 1858600
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||  |||||||||||| |||| |||||||||||||||  |||||||||| |||||||||||||||||| |||||||    
T  1858518 agatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagtttttgaaagtta 1858600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 22220494 - 22220412
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||| |||| ||||||| ||||||||||||| ||| |||||||    
T  22220494 agatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtattttaaagtta 22220412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 30335745 - 30335663
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| ||||  ||||||||| ||||  ||||||| | |||||||||||||||||||||||||||    
T  30335745 agatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagtta 30335663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 12353359 - 12353437
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||| ||||||| |||||||  ||||||||||||||||||||||||||||| |||||||    
T  12353359 tgcaatggggctaaatcttagggggccaaaattatagttttg-tacttagggggccaaaattgcaagtttttgaaagtta 12353437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 18971013 - 18970934
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| |||||||| ||||| |||||||||||||||  |||||||||||||||||||| ||| |||| |||||||    
T  18971013 tgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtta 18970934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 24488678 - 24488756
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||| ||||||||| ||||| ||| |||||||||||||||||||||||||| |||||||    
T  24488678 tgcaatggggctaaatcttacgggg-caaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagtta 24488756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 8388564 - 8388486
Alignment:
Q  18 gcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||| |||| ||||||| |||||||  ||| |||||||| |||||||||| |||||||||||||    
T  8388564 gcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaactttttaaaagtta 8388486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 32207320 - 32207394
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||| |||||||||||||| || |||||||||||||||  ||||||||| | |||||||||||||||||    
T  32207320 agatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagttttt 32207394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 1823656 - 1823576
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||| ||||||||||||| |||  | |||||||||||||  ||||||| ||| |||||||||||||||||||||||||    
T  1823656 atgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtta 1823576  T

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Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 1858101 - 1858021
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||| ||||||||||||| |||  | |||||||||||||  ||||||| ||| |||||||||||||||||||||||||    
T  1858101 atgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtta 1858021  T

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Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 12352016 - 12351945
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||| |||||||||||||||  ||||||||||| ||||||||||| ||||| |||||||    
T  12352016 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagtta 12351945  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 24123893 - 24123975
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| | ||  ||||||||| ||||  |||||| | |||||||||||||||||||| |||||||    
T  24123893 agatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttgaaagtta 24123975  T

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Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 11282111 - 11282032
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| ||||||||| |||| |||||||||  ||||  ||  ||||||||||||||||||| |||||||||||||    
T  11282111 tgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagtta 11282032  T

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Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 11287879 - 11287800
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| | ||| ||||| |||| ||||||||||||||   ||||||| ||||||||||||||||||||| |||||||    
T  11287879 tgcaaaggagttaattcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagtta 11287800  T

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Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 2379919 - 2379999
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| | |||||||||||||||| ||||||||||| |||| ||| || |||||||||||| ||| ||||| |||||||    
T  2379919 agatgcaaatgagctaaatcttaaggggccaaaattgtag-tttcgtacata-ggggccaaaattacaactttttgaaagtta 2379999  T

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Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 24122988 - 24122906
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||  ||||||||||| |||   |||||| |||||||  ||||||||||| ||||||||||| ||||| |||||||    
T  24122988 agatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaattttttaaagtta 24122906  T

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Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 43661371 - 43661297
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||  ||| || ||| ||||||||| || |||||    
T  43661371 agatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaacttttt 43661297  T

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Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 32973933 - 32974046
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcact 115  Q
    |||||||||||||||| | ||  ||| ||||||||| |||||||||| | |||||||||||| ||||  |||| |||||||        |||||||||||    
T  32973933 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta-ggggggaaaaagtgcact 32974031  T
Q  116 ttagccaaaatatta 130  Q
    |||||||||| ||||    
T  32974032 ttagccaaaaaatta 32974046  T

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Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 32968560 - 32968480
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||| | ||  ||| ||||||||| |||||||||| | |||||||||||| ||||  |||| |||||||    
T  32968560 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta 32968480  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 11283207 - 11283286
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||| ||| |||  |||||||||  |||| |||| |||||||| |||||| ||| ||||| |||||||    
T  11283207 tgcaaaggggctaaattttaggggaccaaaattgtcatttttatacatagggggctaaaattacaactttttgaaagtta 11283286  T

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Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 38974898 - 38974819
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||  |||| |||||||    
T  38974898 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta 38974819  T

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Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 38980042 - 38980121
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||  |||| |||||||    
T  38980042 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta 38980121  T

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Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 39005996 - 39005917
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||  |||| |||||||    
T  39005996 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta 39005917  T

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Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 39011139 - 39011218
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||  |||| |||||||    
T  39011139 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta 39011218  T

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Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 30336496 - 30336578
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||  ||||||||||||  |||  ||||||||||||||  |||||||| ||| ||||||  |||||||| |||||||    
T  30336496 agatgcaaaatggctaaatcttagagggttaaaattgtagtttttgtacttaggaggctaaaattataagtttttgaaagtta 30336578  T

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Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 7501847 - 7501929
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  7501847 agatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagtta 7501929  T

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Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 18372452 - 18372526
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||| |||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||||||||||||||    
T  18372452 agatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 18372526  T

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Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 31659726 - 31659618
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactt 116  Q
    ||||| |||||||||||||| |||| |||||||||||||||  ||||||||||| |||||||| |||||||| |||||||        ||||||||||||    
T  31659726 tgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactt 31659627  T
Q  117 tagccaaaa 125  Q
    |||||||||    
T  31659626 tagccaaaa 31659618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 3227210 - 3227139
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||| ||||||||||||||||||||| ||||||| |||||  |||||||||||||||||||||||||||||    
T  3227210 tgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 3227139  T

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Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 47525365 - 47525444
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| ||||| ||||||||||||| |||||||||||||||| |||||||    
T  47525365 tgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaagtttttgaaagtta 47525444  T

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Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18371530 - 18371448
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| | ||||||||||| |||| |||||||||||||||  |||||| |||||||||||||||||||||| |||||||    
T  18371530 agatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagtttttgaaagtta 18371448  T

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Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 22629592 - 22629518
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||||||||||||| |||| |||||||||||||||  |||||||| |||||||||| |||||||||    
T  22629592 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagttttt 22629518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 47369887 - 47369805
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||||||||||| ||||||| |||||||  |||||| | ||| |||||||||||||||| |||||||    
T  47369887 agatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagtta 47369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 17782558 - 17782630
Alignment:
Q  24 gggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||| |||||| ||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta 17782630  T

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Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 3227592 - 3227671
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| ||| || ||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  3227592 tgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta 3227671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 31949425 - 31949354
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  |||||||||||||||||||||||||||||    
T  31949425 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagttttt 31949354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 7500560 - 7500478
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||  |||||||| ||  ||||||||||||||||| |||||||    
T  7500560 agatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagtttttgaaagtta 7500478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 14999150 - 14999228
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaa 92  Q
    ||||||||||||||||||||||| || | |||||||||||||||  || |||||||| |||||||||||||||| ||||    
T  14999150 agatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaagttttgaaaa 14999228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 17781764 - 17781685
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||  ||||||| |||||  ||||||||||| ||||||||||||||||| |||||||    
T  17781764 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta 17781685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 31949800 - 31949879
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| ||| || ||||||| |||||  || |||||||||||||||||||||||||| |||||||    
T  31949800 tgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtta 31949879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 21505520 - 21505438
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| |||||||||||||||  ||  | |||||||||||| |||| ||||| |||||||    
T  21505520 agatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaaagtta 21505438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22630447 - 22630529
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||| ||||| |||| ||||||| ||||  ||||||||||||||  || |||||||||||||||||||||||||| |||||||    
T  22630447 agatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagtttttgaaagtta 22630529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 42886281 - 42886363
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| ||||||||||||| ||||  ||||||||||||||  || |||||||| ||||||||||| ||||| |||||||    
T  42886281 agatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttgaaagtta 42886363  T

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Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 127431 - 127360
Alignment:
Q  24 gggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||| |||||| ||||||| |||||  |||||||||| |||||||||||||||||| |||||||    
T  127431 gggctaaatctta-gggggctaaattgtggttttggtacttaggggaccaaaattgcaagtttttgaaagtta 127360  T

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Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 128599 - 128678
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||| ||||||| |||||| ||||||| |||||  ||||||||||| ||||||||||| ||||| |||||||    
T  128599 tgcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagtta 128678  T

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Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 11658480 - 11658403
Alignment:
Q  19 caaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||| ||||  |||||||||||||||  ||| |||||||| ||||||||| |||||| |||||||    
T  11658480 caaaggggctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagtta 11658403  T

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Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 34351587 - 34351518
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagt 94  Q
    |||||||||||||||||  |||||||||||||  |||||| | | ||||||||||||||||||| |||||    
T  34351587 ggctaaatcttaaggggttaaaattgtagtttctatacttggagagccaaaattgcaagtttttgaaagt 34351518  T

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Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 47524599 - 47524549
Alignment:
Q  46 aattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta 47524549  T

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Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 11662549 - 11662628
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||| ||||  |||| ||||||| |||||||  ||| ||| | || |||||||||||||||| |||||||    
T  11662549 tgcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagtta 11662628  T

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Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 14998086 - 14998048
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgta 52  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  14998086 agatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

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Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 43900507 - 43900565
Alignment:
Q  38 gggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| ||||||||| ||| ||||||  |||||||| ||| |||||||||||||    
T  43900507 gggggcaaaactgtagtttttatatttagggaaccaaaattacaaatttttaaaagtta 43900565  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 20163585 - 20163633
Alignment:
Q  48 ttgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||  ||| ||||| ||||||||||||||||||| |||||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 20163633  T

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Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 1835097 - 1835179
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  1835097 agatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagtta 1835179  T

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Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 13509346 - 13509436
Alignment:
Q  6 aggagcagagatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||| || |||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  13509346 aggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaattttttaaaagtta 13509436  T

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Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 31600983 - 31601092
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactt 116  Q
    |||||| |||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||        ||||||||||||    
T  31600983 tgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta-gaggggaaaaagtgcactt 31601081  T
Q  117 tagccaaaata 127  Q
    |||||||||||    
T  31601082 tagccaaaata 31601092  T

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Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 19750573 - 19750652
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  19750573 tgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtta 19750652  T

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Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 19789233 - 19789154
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  19789233 tgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtta 19789154  T

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Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 12129729 - 12129647
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| |||||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||| |||||||    
T  12129729 agatgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagtta 12129647  T

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Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 31599892 - 31599813
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||| |||  |||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  31599892 tgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 31599813  T

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Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 21539066 - 21539144
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaa 92  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  21539066 agatgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaa 21539144  T

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Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 5526124 - 5526203
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  5526124 tgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaagtttttgaaagtta 5526203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 8758835 - 8758914
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| || |||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||| |||||||    
T  8758835 tgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagtta 8758914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 10471386 - 10471465
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  10471386 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta 10471465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 48780351 - 48780272
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  ||||||||||| |||||||||||||||||||||||||    
T  48780351 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagtta 48780272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 26421627 - 26421699
Alignment:
Q  24 gggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||| |||||||||||||||  |||||||| || ||||||||||||||||| |||||||    
T  26421627 gggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtta 26421699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 1834226 - 1834143
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggc-aaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||| |||| ||||||| |||||||| |||||||| |||||||    
T  1834226 agatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttttaaagtta 1834143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 5525462 - 5525383
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  ||||||||||| ||||||||||||||||| |||||||    
T  5525462 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta 5525383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 25685820 - 25685899
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||| | ||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  25685820 tgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta 25685899  T

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Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 49308045 - 49308104
Alignment:
Q  37 agggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  49308045 agggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta 49308104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 50909667 - 50909746
Alignment:
Q  14 agatgcaaaggggctaaatcttaaggggg-caaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaa 92  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| | |||||| |||| |||||||||    
T  50909667 agatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaactttttaaaa 50909746  T

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Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 1290193 - 1290275
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||| ||||||||| ||||  ||||||||||||||  ||||||| |||||||||||||||| |||| |||||||    
T  1290193 agatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacttagagggccaaaattgcaagattttgaaagtta 1290275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 37728560 - 37728642
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||  |||||||||||| ||| |||||||||||||||  ||| |||| |||||||||||||| |||||||||||||    
T  37728560 agatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaactttttaaaagtta 37728642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 8155843 - 8155760
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggg-gccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| |||||||||||| |||| |||||||||||||||   ||||||||| || |||||||||||||||| |||||||    
T  8155843 agatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagtta 8155760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 8757777 - 8757698
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||||||||||  ||||||||||||||   |||||||||||| ||||||| |||||||| |||||||    
T  8757777 tgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttgaaagtta 8757698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 10447113 - 10447006
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgca 113  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||  ||| |||||||| |||||||||| ||||| ||| |||        |||||||||    
T  10447113 agatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgca 10447014  T
Q  114 ctttagcc 121  Q
    ||||||||    
T  10447013 ctttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 25685037 - 25684958
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  ||||||| ||| ||||||||||||||||| |||||||    
T  25685037 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagtta 25684958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 35935539 - 35935610
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||| ||||||||||||||   |||||||||||| |||||||||| |||||||||||||    
T  35935539 ggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagtta 35935610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 13386530 - 13386634
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactt 116  Q
    ||||| ||||||| |||||| |||||| ||||||| |||||  |||||| |||| ||||||||||||||||| |||||||        ||||||||||||    
T  13386530 tgcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactt 13386629  T
Q  117 tagcc 121  Q
    |||||    
T  13386630 tagcc 13386634  T

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Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 1963299 - 1963220
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||| ||||| ||||  ||||||||||||||  ||| |||| |||||||||||||| ||||| |||||||    
T  1963299 tgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagtta 1963220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 10470649 - 10470570
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| |||||||  ||||  ||||||| ||| ||||||||||||||||| |||||||    
T  10470649 tgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagtta 10470570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 17383095 - 17383016
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| ||| ||||  |||| |||||||||||||||  |||||| ||| |||||||||||||||||| |||||||    
T  17383095 tgcaaaggggataattcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtta 17383016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 35934445 - 35934366
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||||||||||| ||||||| || |||   |||||||||| |||||||| ||||||||| |||||||    
T  35934445 tgcaatggggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttgaaagtta 35934366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 1964440 - 1964518
Alignment:
Q  18 gcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| ||| |||||||||  |||||||||||||||  | | |||||||||||||||| || |||||||||||||    
T  1964440 gcaaaggggataattcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagtta 1964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 27257960 - 27258037
Alignment:
Q  19 caaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||||||  ||||||| ||||||  ||  ||| ||| ||||||||||| |||||||||||||    
T  27257960 caaaggggctaaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaactttttaaaagtta 27258037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 3928855 - 3928935
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||| | ||  ||| ||||||||| |||||||||| |||||||||||||| ||||  |||| |||||||    
T  3928855 atgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgcaacgttttgaaagtta 3928935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 13386111 - 13386047
Alignment:
Q  25 ggctaaatcttaagggggca-aaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||| ||||| | ||||||| |||||  |||||||||||||||||||||||||||||    
T  13386111 ggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaagttttt 13386047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 17388212 - 17388288
Alignment:
Q  20 aaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||| ||||  |||| ||||||||||||||   |||||| ||| |||||||||||||||||| |||||||    
T  17388212 aaaggggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagtttttgaaagtta 17388288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 33310087 - 33310196
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactt 116  Q
    ||||||| ||||||||| ||  ||| ||||||| |||||||  || |||||| || |||||| |||||||||||||||||        ||||||||||||    
T  33310087 tgcaaagaggctaaatcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagtta----ggaaaaaagtgcactt 33310182  T
Q  117 tagccaaaatatta 130  Q
    ||||||||||||||    
T  33310183 tagccaaaatatta 33310196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 52491605 - 52491684
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||| ||| |||| ||||||||||||||   || |||| || |||||||||||||||||| |||||||    
T  52491605 tgcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttgaaagtta 52491684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 10448255 - 10448329
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||  ||| |||||||| ||||| |||| |||||    
T  10448255 agatgcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaacttttt 10448329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 3927743 - 3927690
Alignment:
Q  43 caaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||| | |||||||||||| ||||  ||||||||||||    
T  3927743 caaaattgtagttttcatacatggggggccaaaatcgcaacattttaaaagtta 3927690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 14868990 - 14868916
Alignment:
Q  18 gcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaag 93  Q
    |||| |||||||| ||||| ||||| ||| |||| ||||| |||||||| |||||||||||||||| |||| ||||    
T  14868990 gcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaag 14868916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 14876944 - 14877018
Alignment:
Q  18 gcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaag 93  Q
    |||| |||||||| ||||| ||||| ||| |||| ||||| |||||||| |||||||||||||||| |||| ||||    
T  14876944 gcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgcaagattttgaaag 14877018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 48781044 - 48781122
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||| ||| |||||| ||||||| |||||  |||||||||  |||||||||||| ||||| |||||||    
T  48781044 tgcaatggggctaaattttaggggggctaaattgtggttttagtacttaggga-ccaaaattgcaaatttttgaaagtta 48781122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 49306854 - 49306799
Alignment:
Q  40 gggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtt 95  Q
    ||||||||||||||||||  ||||||   |||||||||||||||||||| ||||||    
T  49306854 gggcaaaattgtagtttttgtacttaaatggccaaaattgcaagtttttgaaagtt 49306799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 1289203 - 1289121
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| |||| ||||||||||| ||  |||||||||||||| |||||||| ||  ||||||| ||| | ||| |||||||    
T  1289203 agatgcaagggggttaaatcttaagaggctaaaattgtagtttttatacttagaggatcaaaattacaaatatttgaaagtta 1289121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 51684472 - 51684390
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  51684472 agatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaactttttaaaagtta 51684390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 45148686 - 45148576
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgca 113  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||        |||||||||    
T  45148686 agatgcaaaggggttaaatcttaggggggcaaaattgtagtttt-ttacttagggggccaaaattgcaagtttttgaaagtta-agcgggaaaaagtgca 45148589  T
Q  114 ctttagccaaaat 126  Q
    |||||||||||||    
T  45148588 ctttagccaaaat 45148576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 36613902 - 36613981
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||| |||||||||||| |||| |||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  36613902 tgcaaagaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagtttttaaaagtta 36613981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 24422903 - 24422824
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||| |||||||||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  24422903 tgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtta 24422824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 45149965 - 45150048
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggg-gcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||  |||||| |||||||||||||||||||||| |||||||    
T  45149965 agatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagtttttgaaagtta 45150048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 45157204 - 45157278
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||  ||| |||||||||||||||||||||||||    
T  45157204 agatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagttttt 45157278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 39222468 - 39222577
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgca 113  Q
    ||||||||| |||| ||||||||  |||  || ||||||||||| |||||||||||||||||||||||||||||| |||||||        |||||||||    
T  39222468 agatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgca 39222567  T
Q  114 ctttagccaa 123  Q
    ||||||||||    
T  39222568 ctttagccaa 39222577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 7983152 - 7983073
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||| ||||||||| |||||||||||||| ||||| |||| |||||||||||||||||||||| || |||||||    
T  7983152 tgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttgaaagtta 7983073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 24426073 - 24426152
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||   ||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  24426073 tgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta 24426152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 41364931 - 41364852
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  || |||||||||||||||||||||||||| |||||||    
T  41364931 tgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagtttttgaaagtta 41364852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 7675454 - 7675536
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| ||||||| || ||||  |||||||| || ||||||||||||||||| |||||||    
T  7675454 agatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagtta 7675536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 11436148 - 11436066
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| ||| ||||||||| |||| ||||||||||||||| |||||||   |||||||||||||||||||| |||||||    
T  11436148 agatgcaaatgggttaaatcttagggggccaaaattgtagtttttatacttaaaaggccaaaattgcaagtttttgaaagtta 11436066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 35594321 - 35594241
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||    
T  35594321 agatgcaaaggggctaaatttta-ggggtcaaaattgtagttttaatactta-ggggtcaaaattgcaagtttttgaaagtta 35594241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 37526873 - 37526954
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||  ||| |||||| ||||||||||||||||||| |||||||    
T  37526873 agatgcaaaggggctaaatctta-ggggccaaaattgtggtttctatatttagggagccaaaattgcaagtttttgaaagtta 37526954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 43058891 - 43058809
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||||||  |||  ||||||||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  43058891 agatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttcaaagtta 43058809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 50680437 - 50680363
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||| ||||||||| |||   |||||| ||||||| ||||||||||||||||||||||||||||||    
T  50680437 agatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagttttt 50680363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 51685760 - 51685842
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| |||||||||||||||  ||| ||| |||||||||| |||| ||||| |||||||    
T  51685760 agatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaagtta 51685842  T

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Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 23980463 - 23980543
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||| | |  ||||||| |||||||  ||||||||| ||||||||||||||||||| |||||||    
T  23980463 atgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagtta 23980543  T

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Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 33088615 - 33088686
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||||||||||| || |||||||||||||||||  ||||||  ||| |||||||||||||||||    
T  33088615 tgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagttttt 33088686  T

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Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 39699765 - 39699844
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||| ||||||||||||||   ||||||||||| |||||||||||||| || |||||||    
T  39699765 tgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattgaaagtta 39699844  T

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Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 52275063 - 52274992
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||  |||||||||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  52275063 ggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtta 52274992  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 52827450 - 52827371
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||  ||||||| |||||  ||||||||||| ||||||||||||||||| |||||||    
T  52827450 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta 52827371  T

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Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 52828068 - 52828139
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  ||||||||| |||||||||||||||||||    
T  52828068 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagttttt 52828139  T

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Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 11437194 - 11437276
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||| ||| ||||||||| |||| |||||||||||||||  |||||| ||| |||||||||||||||||| |||||||    
T  11437194 agatgtaaaagggttaaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagtttttgaaagtta 11437276  T

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Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 39152037 - 39151963
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||| |||||||||| | | |||||||||||||||  ||| ||||||||||||||| |||||||||    
T  39152037 agatgcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggggccaaaattacaagttttt 39151963  T

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Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 39153111 - 39153185
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||| |||||||||  ||| |||||||||||||||  ||| || ||||||||||||||||||||||    
T  39153111 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagttttt 39153185  T

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Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 43060001 - 43060083
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| | |||||||||||||||| |||||||||||||||  |||||| |||| ||||||| ||| ||||| |||||||    
T  43060001 agatgcaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaatttttgaaagtta 43060083  T

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Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 35595187 - 35595270
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattg-tagttttcatacttagggggccaaaattgc-aagtttttaaaagtta 96  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||| |||| ||||||| ||||||||| |||||||| |||||||    
T  35595187 agatgcaaaggggctaaatctt-aggggccaaaattgttagtttttatacatagggggtcaaaattgctaagttttttaaagtta 35595270  T

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Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 44411964 - 44412032
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtt 85  Q
    ||||||||| ||||||||||| |||| ||||||||||||||  |||||||||| | |||||||||||||    
T  44411964 tgcaaagggcctaaatcttaaaggggtaaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

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Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 41366129 - 41366207
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||||| ||||||| ||||||| ||||| ||||||| ||||| ||||||||| |||||| |||||||    
T  41366129 tgcaatggggctaaatctt-agggggctaaattgtggttttgatacttaaggggctaaaattgcatgtttttgaaagtta 41366207  T

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Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 43378708 - 43378790
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||| ||||||||||| | || |||||||||| ||||  ||||||||||  |||||||| |||||||| |||||||    
T  43378708 agatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagtta 43378790  T

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Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 44404548 - 44404466
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||  |||||||| ||| |||| ||||||| |||||||  |||||||||||| |||||||| ||||||| |||||||    
T  44404548 agatgcaaattggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagtta 44404466  T

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Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 14999361 - 14999308
Alignment:
Q  43 caaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  14999361 caaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtta 14999308  T

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Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 35067000 - 35067071
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||||||| ||| |||| |||||||||||||||  | | |||||||||||||| |||| |||||    
T  35067000 tgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaacttttt 35067071  T

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Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 39698657 - 39698587
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| | || ||||||| ||||||   |||||||||||||||||||| ||||||||||||||||    
T  39698657 ggctaaatctta-gtggccaaaattatagtttctgtacttagggggccaaaattgaaagtttttaaaagtta 39698587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 7674603 - 7674551
Alignment:
Q  43 caaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||  |||||||||  ||||||||||||||||||||||||||    
T  7674603 caaaattgtagtttttgtacttagggc-ccaaaattgcaagtttttaaaagtta 7674551  T

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Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 52276161 - 52276240
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||   ||| || |||||||  ||||||||||||||||||| ||| ||||| |||||||    
T  52276161 tgcaatggggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaattacaaatttttgaaagtta 52276240  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 33088169 - 33088091
Alignment:
Q  18 gcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||||||   |||||||||||||| ||| ||||| |   |||||| ||||||||| |||||||    
T  33088169 gcaaatgggctaaatcttaagggaataaaattgtagtttttatatttaggagataaaaattacaagtttttgaaagtta 33088091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 36612958 - 36612877
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||||||||| ||||  ||||||||||||||  ||||||  |  |||||||||||| ||||| |||||||    
T  36612958 agatgcaaagggactaaatcttagggggttaaaattgtagtttttgtactta-agatccaaaattgcaaatttttgaaagtta 36612877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 14999983 - 15000032
Alignment:
Q  47 attgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||| |||  ||||||||||  |||||||||||||||||||||||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagtta 15000032  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 46066631 - 46066547
Alignment:
Q  11 cagagatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||  |||||||||||| ||||  ||||||||||||||  ||| || ||||| ||||| |||| ||||| |||||||    
T  46066631 cagagatgcaaattggctaaatctta-ggggctaaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagtta 46066547  T

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Target: scaffold0019 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 60196 - 60114
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||| || |||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  60196 agatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagtttttaaaagtta 60114  T

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Target: scaffold0019; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 61454 - 61528
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||| |||||||||| || |||| ||||||| |||||||  |||||||||||| ||||||||||||||||    
T  61454 agatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagttttt 61528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 18486897 - 18486979
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||  |||||||||||||||||||||||||||||| |||||||    
T  18486897 agatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagtttttgaaagtta 18486979  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 25523175 - 25523093
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| |||||||||||||||  |||||||||||| |||||||||||||||| |||||||    
T  25523175 agatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagtta 25523093  T

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Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16650850 - 16650932
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| |||||||| |||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  16650850 agatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaagtttttaaaagtta 16650932  T

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Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 19753017 - 19752935
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| ||||||||||| || |||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  19753017 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta 19752935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 25056387 - 25056458
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  25056387 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagtta 25056458  T

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Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 36486486 - 36486565
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| |||||||||| |||  |||||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  36486486 tgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttaaaagtta 36486565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 19754125 - 19754207
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| ||||||||||| || |||| |||||||||||||||  || |||||||||||||||||||||||||| |||||||    
T  19754125 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaagtta 19754207  T

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Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 33160291 - 33160355
Alignment:
Q  24 gggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||||    
T  33160291 gggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagttttt 33160355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 5778002 - 5777923
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  ||||||||||| ||||||||||||||||| |||||||    
T  5778002 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta 5777923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 5778834 - 5778913
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  |||||||||||| |||||||||||||||| |||||||    
T  5778834 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaagtttttgaaagtta 5778913  T

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Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 28538779 - 28538700
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||| ||||  ||||||||||||||  |||||| |||| ||||||||||||||||| |||||||    
T  28538779 tgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagtta 28538700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 28539818 - 28539897
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| |||||||||| |||  |||||||||||||||  ||||||| ||| |||||||||||||||||||||||||    
T  28539818 tgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagtta 28539897  T

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Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22940618 - 22940699
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||||| ||| |||| |||||||||| ||||  ||||||||||||||||||||||||||||| |||||||    
T  22940618 agatgaaaaggggctaaatttta-ggggtcaaaattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagtta 22940699  T

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Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18485251 - 18485162
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaa-------ttgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| |||| |||||       |||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  18485251 agatgcaaaggggctaaatcttagggggccaaaacccaaaattgttgttttgatacttagggggccaaaattgcaagttttttaaagtta 18485162  T

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Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 24333019 - 24332945
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||| |||||||||  ||| |||||||||||||||  ||| || ||||||||||||||||||||||    
T  24333019 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagttttt 24332945  T

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Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 33158188 - 33158122
Alignment:
Q  30 aatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||||||||||||||  ||||||||| | ||||||||||||||||| |||||||    
T  33158188 aatcttaaggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagtta 33158122  T

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Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 25055518 - 25055449
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaag 83  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||| |||| ||||||  ||||||||||||    
T  25055518 agatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaag 25055449  T

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Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 25524093 - 25524158
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattg 79  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||  |||||||| |||||||||||    
T  25524093 agatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

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Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 42195238 - 42195161
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaa 91  Q
    ||||||||||||||||||||||| |||  ||||||||||| |||  ||| |||||||||||||| |||| ||||||||    
T  42195238 agatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaactttttaaa 42195161  T

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Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 1797295 - 1797370
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaa 92  Q
    ||||||||||||||||||||||||  |||||||||||||||  |   || || |||||||||||||||||||||||    
T  1797295 tgcaaaggggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagtttttaaaa 1797370  T

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Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 40255670 - 40255745
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaa 92  Q
    ||||| |||| ||||||||| |||| ||||||||||||||   || |||||||| |||||||||||||||||||||    
T  40255670 tgcaatggggttaaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaa 40255745  T

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Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 5730860 - 5730931
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||| |||| ||||||||| |||| | ||||||| |||||  |||||||||||||||||||| ||||||||    
T  5730860 tgcaatggggttaaatcttagggggactaaattgtggttttggtacttagggggccaaaattggaagttttt 5730931  T

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Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 7311685 - 7311614
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| ||||  ||||||||||||||  ||||| || |||||| ||||||||||||| |||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagtta 7311614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 25524151 - 25524229
Alignment:
Q  43 caaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactttagcc 121  Q
    |||||||||||||||  ||||||||||||||||||| ||| ||||||||| |||        |||||||||||||||||    
T  25524151 caaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagcc 25524229  T

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Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 1796131 - 1796078
Alignment:
Q  43 caaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||  |||||||| ||||||| |||||||||||| |||||||    
T  1796131 caaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagtta 1796078  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 1015588 - 1015508
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| |||| ||||| ||||  |||||||||| |||  |||  ||||||||||||||| || |||||||||||||    
T  1015588 atgcaaagggactaattcttagggggttaaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagtta 1015508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 21835143 - 21835083
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaat 77  Q
    |||||||||| ||||||||| |||| |||||||||||||||  ||| ||||||| ||||||    
T  21835143 tgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaat 21835083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 16650098 - 16650043
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggg 69  Q
    ||||||||||||| |||||||||  ||| |||||||||||||||  ||||||||||    
T  16650098 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacttagggg 16650043  T

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Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 20214298 - 20214219
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||| ||| ||| |||| ||||| |||||||||||||||  ||| ||| | || |||||||||||||||| |||||||    
T  20214298 tgcaaatgggataattcttgaggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagtta 20214219  T

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Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 2686396 - 2686478
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| | ||||||||| || |||  ||||||| |||||||  |||||| | |  |||||||||||||||||||||||||    
T  2686396 agatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagtta 2686478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 5730523 - 5730441
Alignment:
Q  39 ggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactttagcc 121  Q
    ||||| ||||||| |||||  ||||||||  ||||||||||||||||||| |||||||        |||||||||||||||||    
T  5730523 ggggctaaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagcc 5730441  T

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Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  46 aattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||  ||| ||||| ||||||||||||||||||| |||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 18154573 - 18154518
Alignment:
Q  40 gggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||  |||||| |||| |||||||| |||||||| |||||||    
T  18154573 gggcaaaattgtagtttttgtactta-ggggtcaaaattgtaagtttttgaaagtta 18154518  T

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Target: chr3 (Bit Score: 59; Significance: 7e-25; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 24516562 - 24516484
Alignment:
Q  18 gcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  24516562 gcaaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagtta 24516484  T

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Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 47614291 - 47614209
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| |||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  47614291 agatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagtttttgaaagtta 47614209  T

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Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 29932697 - 29932775
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| ||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||| |||||||    
T  29932697 tgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagtta 29932775  T

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Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 29981851 - 29981929
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| ||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||||||| |||||||    
T  29981851 tgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaagtttttgaaagtta 29981929  T

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Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 47610578 - 47610657
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||| ||||||| |||||  ||||||||||||||||||||||||||||| |||||||    
T  47610578 tgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagtta 47610657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 54540788 - 54540867
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||| |||| |||||||||||||||  |||||| |||| ||||||||||||||||| |||||||    
T  54540788 tgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttgaaagtta 54540867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 12700279 - 12700197
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| | ||||||||| || |||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  12700279 agatgcaatgtggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta 12700197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 19984955 - 19984881
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||  ||| |||||||||||||||||||||||||    
T  19984955 agatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagttttt 19984881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 7267738 - 7267667
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||| ||||||||||||||   ||||||||||||||||||||||||||||| |||||||    
T  7267738 ggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagtta 7267667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 7758508 - 7758393
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgca 113  Q
    |||| |||||||| ||||||||| ||||  ||||||||||||||  ||||||||||| ||||||||||||||||| |||||||        |||||||||    
T  7758508 agatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtta-agggggaaaaagtgca 7758410  T
Q  114 ctttagccaaaatatta 130  Q
    |||||||| ||||||||    
T  7758409 ctttagcctaaatatta 7758393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 29931329 - 29931250
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| ||||||||| |||| |||||||||||||||  || ||||||||| |||||||||||||||| |||||||    
T  29931329 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagtta 29931250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 29980483 - 29980404
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| ||||||||| |||| |||||||||||||||  || ||||||||| |||||||||||||||| |||||||    
T  29980483 tgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagtta 29980404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 52840602 - 52840681
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||| ||||||||| ||||| ||| |||||| ||||||||||||||||||| |||||||    
T  52840602 tgcaatggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagtta 52840681  T

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Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 55191993 - 55192072
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| ||| |||| ||||| |||||||||||||||  ||||||| ||||||||||||||||||||| |||||||    
T  55191993 tgcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagtta 55192072  T

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Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 12703495 - 12703577
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| ||||||||||| || |||| |||||||||||||||  ||||||||||||||||||| ||| ||||| |||||||    
T  12703495 agatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtta 12703577  T

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Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22776809 - 22776889
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||| ||||| |||| |||||||||||||||  ||| ||||||||||||||||||| ||| | |||||||    
T  22776809 atgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagtta 22776889  T

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Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 51470075 - 51469963
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactt 116  Q
    ||||| |||||||||||||| |||||  ||||||| |||||  ||||||||||||||||||||||||||||| ||| |||        ||||||||||||    
T  51470075 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaaatta-gggagggaaaagtgcactt 51469977  T
Q  117 tagccaaaatatta 130  Q
    ||||||| ||||||    
T  51469976 tagccaatatatta 51469963  T

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Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 7268825 - 7268904
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||| |||||||||| | || ||||||||||||||  ||||||||| |||||||||||||||||||| |||||||    
T  7268825 tgcaatgggactaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtta 7268904  T

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Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 47609800 - 47609721
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||||  ||||||| |||||  ||||||||||| ||||||||||||||||| |||||||    
T  47609800 tgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta 47609721  T

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Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 19986065 - 19986141
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttag--ggggccaaaattgcaagttttt 88  Q
    ||||||||||||| |||||||||  ||| ||||||||||||||| |||| |||  ||||||||||||||||||||||    
T  19986065 agatgcaaaggggttaaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagttttt 19986141  T

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Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 535787 - 535859
Alignment:
Q  24 gggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||| ||||  |||||| ||||||| ||||||| ||| |||||||||||||||||| |||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagtta 535859  T

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Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 46720045 - 46719965
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||| |||||||||||||  ||   |||||||||||||| |||| |||||||||||||| |||| |||||||||||||    
T  46720045 atgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaactttttaaaagtta 46719965  T

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Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 8456572 - 8456509
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||| |||| |||||||||||||||  || ||||||| ||||||||||||||||||    
T  8456572 ggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaagttttt 8456509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 31645079 - 31645000
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaag 93  Q
    ||||||||| ||||||||||||| | ||  ||||||||||||||   ||||||||||||||||||| |||||||| ||||    
T  31645079 agatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttgaaag 31645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 534605 - 534531
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||  |||||||||||| |||| |||||||||||||||  ||| |||| || |||||||||||||||||    
T  534605 agatgcaaataggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagttttt 534531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 11671336 - 11671418
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||| |||||| || |||| ||||  ||||||||| ||| ||||||||| |||||||||||||||| |||||||    
T  11671336 agatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgcaagtttttgaaagtta 11671418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 49216353 - 49216279
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||| | |||||||||||||||| || ||||||||||||  ||| ||||||| ||||||||||| |||||    
T  49216353 agatgcaaatgagctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaacttttt 49216279  T

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Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 46721217 - 46721297
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||| |||   ||||||||||||||  ||| |||||||  ||||| |||| |||||||||||||    
T  46721217 atgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaactttttaaaagtta 46721297  T

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Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 5029682 - 5029757
Alignment:
Q  18 gcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaag 93  Q
    |||| |||||||| ||||| ||||| |||||||| |||||  |||||||| ||||||||||||||| |||| ||||    
T  5029682 gcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgcaagattttgaaag 5029757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 18442734 - 18442655
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||| | || |||| |||||||||||||||||||| | |||||||||||| ||||  |||| |||||||    
T  18442734 tgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagtta 18442655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 18456067 - 18456170
Alignment:
Q  23 ggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactttagcca 122  Q
    ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||  |||| |||||||        ||||||||||||||||||    
T  18456067 ggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttagcca 18456166  T
Q  123 aaat 126  Q
    ||||    
T  18456167 aaat 18456170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 19487808 - 19487729
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||| | || |||| |||||||||||||||||||| | |||||||||||| ||||  |||| |||||||    
T  19487808 tgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaaatcgcaacgttttgaaagtta 19487729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 28263109 - 28263188
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||  ||||||||||||    
T  28263109 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttaaaagtta 28263188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 51038788 - 51038867
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||  || |||||||||  |||||||||||||||  | | ||||||| ||||||||||| |||||||||||||    
T  51038788 tgcaaaggggacaattcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagtta 51038867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 54539858 - 54539779
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||| | ||||||||||| |||  |||||||||||||||  || ||||||||  |||||||||||||||| |||||||    
T  54539858 tgcaaatgagctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagtttttgaaagtta 54539779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 34019140 - 34019222
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| | ||||||| ||| |||  |||||||||||| ||  ||| ||||||| ||||||||||||||||| |||||||    
T  34019140 agatgcaaatgagctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttgaaagtta 34019222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 11670488 - 11670416
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||| ||| ||||||| ||||||  ||||||| ||||||| ||||||||||| | |||||||||| |||||    
T  11670488 atgcaatgggactaaatcataagggaccaaaattatagtttttatacttaggggactaaaattgcaaattttt 11670416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 28262295 - 28262216
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||  |||| |||||||    
T  28262295 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta 28262216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 51037638 - 51037559
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||| ||||| ||||  ||||||||||||||  | | ||| ||| ||||||||||| ||||| |||||||    
T  51037638 tgcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagtta 51037559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 51470453 - 51470532
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| || ||||||||||| ||| || ||||||| |||||  ||||||||||  | ||||||||||||||| |||||||    
T  51470453 tgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaagtttttgaaagtta 51470532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 23770402 - 23770476
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||| ||||||||| ||||  ||||||||||||||  ||| || ||| ||||||||| || |||||    
T  23770402 agatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaacttttt 23770476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 47615591 - 47615625
Alignment:
Q  62 cttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||||||| |||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagtta 47615625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 54987002 - 54987076
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||| |||||||||||  ||| ||||||| ||||||| |||| |||||| | ||||| |||| |||||    
T  54987002 agatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaacttttt 54987076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 55191613 - 55191544
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttt 87  Q
    ||||||||||||||||||| || ||| |||||| |||||||  || |||||| | ||||||||||||||||    
T  55191613 tgcaaaggggctaaatcttgagaggg-aaaattatagtttttgtatttagggtgtcaaaattgcaagtttt 55191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 8876010 - 8875945
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgca 81  Q
    |||||||  |||||||||||| |||| |||||||||||||||  ||| || ||||| |||||||||    
T  8876010 atgcaaattggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgca 8875945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 52276407 - 52276342
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaa 82  Q
    ||||| ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||    
T  52276407 tgcaatggggctaaaacatagggggccaaaattgttgttttcatacatggggggccaaaatcgcaa 52276342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 52281545 - 52281610
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaa 82  Q
    ||||| ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||    
T  52281545 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaa 52281610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 5001275 - 5001227
Alignment:
Q  45 aaattgtagttttcatacttagggggccaaaattgcaagtttttaaaag 93  Q
    ||||||| |||||  |||||||||||||||||||||||| |||| ||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaag 5001227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 47615572 - 47615608
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattg 50  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  47615572 agatgcaaaggggctaaatcttagggggccaaaattg 47615608  T

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Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 18797353 - 18797246
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgca 113  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||        |||||||||    
T  18797353 agatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgca 18797254  T
Q  114 ctttagcc 121  Q
    ||||||||    
T  18797253 ctttagcc 18797246  T

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Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22587949 - 22588030
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| || |||||||||||||||||||||| |||||||    
T  22587949 agatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacata-ggggccaaaattgcaagtttttgaaagtta 22588030  T

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Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 36449881 - 36449802
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| |||| ||||  ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  36449881 tgcaaagggcctaattcttgggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta 36449802  T

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Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18299479 - 18299397
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| |||||||||| || |||| ||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||    
T  18299479 agatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaagtttttgaaagtta 18299397  T

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Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 28618027 - 28617946
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  ||||| |||||||||||||||||| |||| |||||||    
T  28618027 agatgcaaaggggctaaatctta-gggggcaaaattgaagtttttgtacttggggggccaaaattgcaagattttgaaagtta 28617946  T

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Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 23869530 - 23869607
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaa 91  Q
    ||||||||||||||||||||||| || |  ||||||||||||||  || |||||||||||||||||||||||||||||    
T  23869530 agatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagtttttaaa 23869607  T

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Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 7898794 - 7898715
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||| ||||||||||||||  ||||||||| ||| |||||||||||||||| |||||||    
T  7898794 tgcaatggggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagtta 7898715  T

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Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 11258809 - 11258888
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| |||   ||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  11258809 tgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagtta 11258888  T

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Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 22848294 - 22848215
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||| || | |||||||||||||||  || ||||||| |||||||||||||||||| |||||||    
T  22848294 tgcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagtttttgaaagtta 22848215  T

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Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 38840491 - 38840570
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| ||||  ||||||||||||||  |||||||||||| |||||||||||||||| |||||||    
T  38840491 tgcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagtta 38840570  T

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Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 41878197 - 41878132
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaa 82  Q
    ||||| ||||||||||||||||||| ||||||||||||||   |||||||||||||||||||||||    
T  41878197 tgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaa 41878132  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 38839345 - 38839274
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||| |||||||||||||| |||| |||||||||||||||  || ||||||||| ||||||||||||||||    
T  38839345 tgcaatggggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagttttt 38839274  T

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Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 18300720 - 18300801
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||||||  || |||| |||||||||||||||  ||||||||||| ||||||||||||||| | |||||||    
T  18300720 agatgcaaaggggctaaattata-ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttatgaaagtta 18300801  T

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Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 18905983 - 18906064
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| | ||||||||||| ||||  ||||||||||||||  |||||||||||| |||||||||||||||| |||||||    
T  18905983 agatgcaaatgagctaaatctta-ggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagtta 18906064  T

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Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 24475330 - 24475248
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| | |||||||  || |||| ||||||||||||||| ||||||||||||| |||||| ||||||||| |||||||    
T  24475330 agatgcaaatgagctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagtttttgaaagtta 24475248  T

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Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 7899886 - 7899959
Alignment:
Q  23 ggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||| ||||  |||||||||||||   |||||||||| |||||||||||||||||| |||||||    
T  7899886 ggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagtta 7899959  T

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Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 1034475 - 1034546
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||||| ||||||| |||||  ||| |||||||||||||||||| |||||| |||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagtta 1034546  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 24476861 - 24476920
Alignment:
Q  36 aagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtt 95  Q
    |||||| |||||||||||||||  |||||||||| |||||||| ||||||||||||||||    
T  24476861 aaggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt 24476920  T

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Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18904473 - 18904391
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||| ||||| ||   |||||||||||||||  |||||| ||||||||||||||| |||||| |||||||    
T  18904473 agatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgcacgtttttgaaagtta 18904391  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 802588 - 802660
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||  ||||||||  ||| |||||||||||||||  |||  ||||||||||||||||||||||||    
T  802588 atgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagttttt 802660  T

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Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 810778 - 810850
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||  ||||||||  ||| |||||||||||||||  |||  ||||||||||||||||||||||||    
T  810778 atgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagttttt 810850  T

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Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 8535654 - 8535733
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||| ||||| |||| ||||||||||||||   ||||||  ||  ||||||| |||||||||||||||||    
T  8535654 tgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattacaagtttttaaaagtta 8535733  T

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Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 11257724 - 11257646
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||||||| | || ||||||||||||||| ||||||||||    |||||||||||||||| |||||||    
T  11257724 tgcaatggggctaaatcttaggaggccaaaattgtagtttttatacttagggttt-aaaattgcaagtttttgaaagtta 11257646  T

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Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 36450919 - 36450998
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| ||||| ||||  |||| | ||||||||||||   |||||||||| |||||||||||||||||| |||||||    
T  36450919 tgcaaaggagctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagtta 36450998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 41879210 - 41879281
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||| || ||||||| ||| ||||  |||||||||||||   |||||||||||||||||||||||||||||    
T  41879210 tgcaatggtgctaaattttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagttttt 41879281  T

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Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 13030395 - 13030314
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| | ||||||||||| ||||  ||||||||| ||||  |||||| |||||||||||| ||||||||| |||||||    
T  13030395 agatgcaaaagagctaaatcttagggggcaaaaattgtaatttttgtactta-ggggccaaaattacaagtttttgaaagtta 13030314  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 22587606 - 22587525
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| |||||||||||| |||| |||||||||||||||  ||  |||||| ||||||||| || ||||| |||||||    
T  22587606 agatgcaaagaggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttgaaagtta 22587525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 32739705 - 32739647
Alignment:
Q  38 gggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||| |||||||||||||||  ||| || |||||||||||||||||||||| |||||||    
T  32739705 ggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagtta 32739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 13568049 - 13568004
Alignment:
Q  43 caaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||||||  || ||||||||||||||||||||||||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaagttttt 13568004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 18869001 - 18868948
Alignment:
Q  43 caaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||||  || ||||| |||||||||||||||||||| |||||||    
T  18869001 caaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagtta 18868948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 26545516 - 26545596
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagt 94  Q
    |||||||||||||||||||||||  ||| ||||||| || ||||  || ||| |||| ||||||||||| ||||| |||||    
T  26545516 agatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaatttttgaaagt 26545596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 1033312 - 1033234
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||||||  ||||  ||||| || ||||  || ||||||| ||||||||||||||||||||||||||    
T  1033312 tgcaatggggctaaatcttagaggggttaaattataattttggtatttagggg-ccaaaattgcaagtttttaaaagtta 1033234  T

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Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 11938787 - 11938865
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||| | ||||| ||||| |||||||||||| || ||||  |||||||| | |||||||||||||||||| |||||||    
T  11938787 tgcaaaagagctaattcttaggggggcaaaattatatttttg-tacttaggagaccaaaattgcaagtttttgaaagtta 11938865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 1091790 - 1091736
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattg 79  Q
    ||||||||||||||||| ||||||||||| ||| |||| ||| || |||||||||    
T  1091790 ggctaaatcttaaggggtcaaaattgtagcttttatacatagaggaccaaaattg 1091736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 96
Target Start/End: Original strand, 21837298 - 21837332
Alignment:
Q  62 cttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||||||||||||||| |||||||    
T  21837298 cttagggggccaaaattgcaagtttttgaaagtta 21837332  T

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Target: scaffold0302 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 17573 - 17494
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||| ||| ||||  |||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  17573 tgcaaaggggataattcttggggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagtta 17494  T

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Target: scaffold0302; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 18774 - 18853
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||| |||||||| ||||||| |||||||  ||| |||||| |||||||||||| |||||||||||||    
T  18774 tgcaatggggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaatttttaaaagtta 18853  T

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Target: scaffold1303 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 1545 - 1463
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||| ||||||||||||| |||| ||||||| ||||||| |||| ||||||| ||||||||||||||||| |||||||    
T  1545 agatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagttttttaaagtta 1463  T

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Target: scaffold0320 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 19594 - 19520
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||||| ||||||||| |||  ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19594 agatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggtttt 19520  T

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Target: scaffold0294 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 5442 - 5507
Alignment:
Q  23 ggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||| |||||||||||||||||    
T  5442 ggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagttttt 5507  T

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Target: scaffold0045 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 49109 - 49161
Alignment:
Q  44 aaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagtta 49161  T

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Target: scaffold0003 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 49431 - 49510
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||| ||||||||||| |||| ||||||||||||||| ||   ||||||||||||||||||| ||||| |||||||    
T  49431 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaacttttttaaagtta 49510  T

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Target: scaffold2034 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 337 - 257
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||| ||||| |||  ||||||| |||||||  ||| |||||| |||||||||||| ||||| |||||||    
T  337 atgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagtta 257  T

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Target: scaffold2034; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 975 - 1055
Alignment:
Q  16 atgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||||||||||||| ||||  |||| ||||||| |||||||  ||| || ||| |||||||||||| |||||||||||||    
T  975 atgcaaaggggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagtta 1055  T

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Target: scaffold0186 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 23887 - 23967
Alignment:
Q  17 tgcaaaggggctaaatctta-agggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||||| || |||||| ||| |||| ||||| ||| |||||| ||||||||||||||||||| |||||||    
T  23887 tgcaatggggctaaatcctatagggggaaaagttgttgttttgatatttagggagccaaaattgcaagtttttgaaagtta 23967  T

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Target: scaffold0186; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 23182 - 23103
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| ||||||||| |||| ||| |||| ||||| |||||  ||||||| ||| ||||||||||||||||| |||||||    
T  23182 tgcaatggggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta 23103  T

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Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 4728 - 4807
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    ||||| |||||||||  |||  ||| ||||||||||||||   || ||||||||||||||||||| ||||||||||||||    
T  4728 tgcaatggggctaaaatttagagggtcaaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtta 4807  T

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Target: scaffold0059; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 3770 - 3699
Alignment:
Q  25 ggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagtta 96  Q
    |||||||||||| |||   |||||| ||||||   |||| |||||||||||||||||||||||| |||||||    
T  3770 ggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagtta 3699  T

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Target: scaffold0632 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 3306 - 3383
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagt 94  Q
    |||||||||||||||||||| |||  ||||||| |||||||  ||| || |||| |||||||| |||||||| |||||    
T  3306 tgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaagt 3383  T

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Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 37244 - 37179
Alignment:
Q  23 ggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    ||||||||||| || |||| ||||||||| |||||  ||||||||||| ||||||||||| |||||    
T  37244 ggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttt 37179  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 117 - 225
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagtttttaaaagttannnnnnnnaaaagtgcactt 116  Q
    ||||| ||||||||| | || |||| ||||||||| |||||||||| | |||||||||||| ||||  |||| |||||||        ||||||||||||    
T  117 tgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaaatcgcaacgttttgaaagtta-gggggggaaaagtgcactt 215  T
Q  117 tagccaaaat 126  Q
    ||||||||||    
T  216 tagccaaaat 225  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 7413 - 7473
Alignment:
Q  17 tgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaat 77  Q
    |||||||||||||||||||| |||| ||||||||||||||   ||| ||||||| ||||||    
T  7413 tgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaat 7473  T

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Target: scaffold0586 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 6449 - 6386
Alignment:
Q  14 agatgcaaaggggctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaat 77  Q
    |||||||||  |||||||||||| |||| |||||||||||||||  ||| |||||||| |||||    
T  6449 agatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaat 6386  T

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Target: scaffold0093 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 2472 - 2534
Alignment:
Q  26 gctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||| || |||| |||||| || |||||  ||||||||||| |||||||||||||||||    
T  2472 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 2534  T

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Target: scaffold0093; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 7095 - 7157
Alignment:
Q  26 gctaaatcttaagggggcaaaattgtagttttcatacttagggggccaaaattgcaagttttt 88  Q
    |||||||| || |||| |||||| || |||||  ||||||||||| |||||||||||||||||    
T  7095 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttt 7157  T

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