View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13645_high_4 (Length: 261)

Name: NF13645_high_4
Description: NF13645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13645_high_4
NF13645_high_4
[»] chr7 (13 HSPs)
chr7 (2-251)||(33833744-33833992)
chr7 (2-52)||(4258266-4258316)
chr7 (2-52)||(10903546-10903596)
chr7 (2-53)||(9378784-9378835)
chr7 (2-52)||(9378992-9379042)
chr7 (2-52)||(10903339-10903389)
chr7 (2-52)||(16565090-16565140)
chr7 (2-52)||(16600522-16600572)
chr7 (2-52)||(23390582-23390632)
chr7 (2-52)||(31357737-31357787)
chr7 (2-52)||(35866701-35866751)
chr7 (4-52)||(30768410-30768458)
chr7 (4-52)||(33855473-33855521)
[»] chr3 (4 HSPs)
chr3 (2-53)||(32034082-32034133)
chr3 (2-54)||(37040045-37040097)
chr3 (2-52)||(40926446-40926496)
chr3 (2-55)||(42637809-42637862)
[»] chr6 (2 HSPs)
chr6 (2-52)||(26394543-26394593)
chr6 (6-52)||(11316835-11316881)
[»] chr5 (5 HSPs)
chr5 (2-52)||(21019932-21019982)
chr5 (5-52)||(29008064-29008111)
chr5 (2-53)||(39268009-39268060)
chr5 (2-56)||(20720612-20720666)
chr5 (2-52)||(35913422-35913472)
[»] chr1 (4 HSPs)
chr1 (2-54)||(45395542-45395594)
chr1 (4-52)||(47377827-47377875)
chr1 (2-52)||(48558383-48558433)
chr1 (2-46)||(9632388-9632432)
[»] chr4 (6 HSPs)
chr4 (6-53)||(42312821-42312868)
chr4 (2-52)||(3640198-3640248)
chr4 (2-52)||(3640448-3640498)
chr4 (2-52)||(28497276-28497326)
chr4 (2-52)||(39110899-39110949)
chr4 (2-55)||(43943662-43943715)
[»] chr2 (1 HSPs)
chr2 (2-53)||(39386661-39386712)
[»] chr8 (8 HSPs)
chr8 (2-56)||(8559569-8559623)
chr8 (2-52)||(33435875-33435925)
chr8 (2-52)||(43599303-43599353)
chr8 (2-52)||(43901079-43901129)
chr8 (7-52)||(15857171-15857216)
chr8 (3-52)||(30065983-30066032)
chr8 (2-51)||(37537157-37537206)
chr8 (2-54)||(33435669-33435721)


Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 33833992 - 33833744
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataataacgtacaaattaatactattttttacaaaacaaattaatactttta 101  Q
    |||||||||||||||||||||| |||| ||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33833992 tcttatcaagagtcttatctatccgatgtgggacatgggttttttccaataataacgtacaaattaatactattttttacaaaacaaattaatactttta 33833893  T
Q  102 aaccgtaaaaaagatcaagcattgtagtagtgttgtagtggtgattggaagtgatcggattgataatcgaagttaggtgaagcggcgtagtagtttgaat 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33833892 aac-gtaaaaaagatcaagcattgtagtagtgttgtagtggtgattggaagtgatcggattgataatcgaagttaggtgaagcggcgtagtagtttgaat 33833794  T
Q  202 tgtttgattaatagttatagtgatggacatatgtgatcaaattgatgatg 251  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  33833793 tgtttgattagtagttatagtgatggacatatgtgatcaaattaatgatg 33833744  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 4258266 - 4258316
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||||||||    
T  4258266 tcttatcaagagtcttatctatccgatgtgggacttgagtttttcccaata 4258316  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 10903546 - 10903596
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || ||||||||||||||||    
T  10903546 tcttatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 10903596  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 9378835 - 9378784
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 53  Q
    |||| |||||||||||||||||||||| ||| || || ||||||||||||||    
T  9378835 tcttctcaagagtcttatctattcgatgtgggacttgggtttttcccaataa 9378784  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 9379042 - 9378992
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||| ||||||||||||||||| |||| |||||| || |||||||||||||    
T  9379042 tcttctcaagagtcttatctatccgatgtggaacttgggtttttcccaata 9378992  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 10903339 - 10903389
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  10903339 tcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 10903389  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 16565140 - 16565090
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  16565140 tcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16565090  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 16600522 - 16600572
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  16600522 tcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600572  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 23390632 - 23390582
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  23390632 tcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 23390582  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 31357737 - 31357787
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  31357737 tcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 31357787  T

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Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 35866701 - 35866751
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  35866701 tcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 35866751  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 30768458 - 30768410
Alignment:
Q  4 ttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||| |||| ||| || ||||||||||| ||||    
T  30768458 ttatcaagagtcttatctatccgatgtgggacatgagtttttcctaata 30768410  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 33855521 - 33855473
Alignment:
Q  4 ttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||| ||||||||||||| |||||||| || || |||||||||||||    
T  33855521 ttatcacgagtcttatctatccgatatgggacttgggtttttcccaata 33855473  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 32034133 - 32034082
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 53  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  32034133 tcttatcaagagtcttatctattcgatgtgggacatgagtttttcccaataa 32034082  T

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Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 37040045 - 37040097
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 54  Q
    |||||||||||||||||||| |||||| |||||| |||||||||  |||||||    
T  37040045 tcttatcaagagtcttatcttttcgatgtggaacatgagtttttttcaataat 37040097  T

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Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 40926496 - 40926446
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  40926496 tcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 40926446  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 42637809 - 42637862
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataata 55  Q
    |||||||||||||||||||||| | || ||| |  |||||||||||||||||||    
T  42637809 tcttatcaagagtcttatctatccaatgtgggatatgagtttttcccaataata 42637862  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 26394593 - 26394543
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  26394593 tcttatcaagagtcttatctatccgatgtggaacatgagtttttcccaata 26394543  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 11316881 - 11316835
Alignment:
Q  6 atcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    ||||||||||| |||||| |||| |||||| ||||||||||||||||    
T  11316881 atcaagagtctcatctatccgatgtggaacttgagtttttcccaata 11316835  T

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Target: chr5 (Bit Score: 35; Significance: 0.00000000009; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 21019932 - 21019982
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  21019932 tcttatcaagagtcttatatatccgatgtggaacatgagtttttcccaata 21019982  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 29008111 - 29008064
Alignment:
Q  5 tatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    ||||||||||||||||||| |||| |||||| || |||||||||||||    
T  29008111 tatcaagagtcttatctatccgatgtggaacatgggtttttcccaata 29008064  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 39268060 - 39268009
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 53  Q
    |||||||||||||||||||||| |||| ||| || || ||||||||||||||    
T  39268060 tcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 39268009  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 20720612 - 20720666
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataataa 56  Q
    ||||||||||| ||||||||||  ||| ||| || ||||||||||||||||||||    
T  20720612 tcttatcaagaatcttatctatctgatgtgggacttgagtttttcccaataataa 20720666  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 35913472 - 35913422
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||| ||||||||||| |||||||||||  || ||||||||||||||||    
T  35913472 tcttataaagagtcttatatattcgatatgagacttgagtttttcccaata 35913422  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 45395594 - 45395542
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 54  Q
    ||||||||||||||||||||||  ||||||| || || |||||||||||||||    
T  45395594 tcttatcaagagtcttatctatctgatatgggacttgggtttttcccaataat 45395542  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 47377875 - 47377827
Alignment:
Q  4 ttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||| |||| ||| || ||||||||||||||||    
T  47377875 ttatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 47377827  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 48558383 - 48558433
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||| ||||||||||||||||| |||||||| || || |||||||||||||    
T  48558383 tcttctcaagagtcttatctatccgatatgggacttgggtttttcccaata 48558433  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 9632432 - 9632388
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttc 46  Q
    ||||| ||||||| |||||||| ||||||||||| ||||||||||    
T  9632432 tcttaccaagagttttatctatccgatatggaacttgagtttttc 9632388  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000006; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 42312868 - 42312821
Alignment:
Q  6 atcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 53  Q
    ||||||||||| |||||| ||||||||||| ||||||||| |||||||    
T  42312868 atcaagagtctcatctatccgatatggaacttgagttttttccaataa 42312821  T

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Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 3640248 - 3640198
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||  ||| || ||||||||||||||||    
T  3640248 tcttatcaagagtcttatctatccgacgtgggacatgagtttttcccaata 3640198  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 3640498 - 3640448
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| |  ||||||||||||||||    
T  3640498 tcttatcaagagtcttatctatccgatgtgggagatgagtttttcccaata 3640448  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 28497276 - 28497326
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  28497276 tcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 28497326  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 39110949 - 39110899
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||| ||||||||||||||||| |||| ||| || ||||||||||||||||    
T  39110949 tcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 39110899  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 43943715 - 43943662
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataata 55  Q
    |||| ||||||||||||||||| |||| ||| || || ||||||||||||||||    
T  43943715 tcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataata 43943662  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 39386712 - 39386661
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataa 53  Q
    |||||||||||||||||||||| |||| ||| || || ||||||||||||||    
T  39386712 tcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaataa 39386661  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 8559623 - 8559569
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataataa 56  Q
    |||| ||||||||||||||||| |||| ||| || || |||||||||||||||||    
T  8559623 tcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataataa 8559569  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 33435925 - 33435875
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  33435925 tcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 33435875  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 43599353 - 43599303
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||| ||||||||||||||||| |||| ||| || ||||||||||||||||    
T  43599353 tcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 43599303  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 43901079 - 43901129
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||| |||| ||| || || |||||||||||||    
T  43901079 tcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 43901129  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 15857216 - 15857171
Alignment:
Q  7 tcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    ||||||||||||||||| |||| ||| || ||||||||||||||||    
T  15857216 tcaagagtcttatctatccgatgtgggacttgagtttttcccaata 15857171  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 30066032 - 30065983
Alignment:
Q  3 cttatcaagagtcttatctattcgatatggaacgtgagtttttcccaata 52  Q
    |||||||||||||||||||||  ||| ||| || ||||||||||||||||    
T  30066032 cttatcaagagtcttatctatctgatgtgggacttgagtttttcccaata 30065983  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 37537157 - 37537206
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaat 51  Q
    |||| |||| ||||||||||||||||| ||| || |||||||||||||||    
T  37537157 tcttctcaaaagtcttatctattcgatgtgggacttgagtttttcccaat 37537206  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 33435721 - 33435669
Alignment:
Q  2 tcttatcaagagtcttatctattcgatatggaacgtgagtttttcccaataat 54  Q
    ||||||||||||| |||||||| |||| ||  || ||||||||||||||||||    
T  33435721 tcttatcaagagttttatctatccgatgtgagacttgagtttttcccaataat 33435669  T

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