View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13646_high_7 (Length: 313)

Name: NF13646_high_7
Description: NF13646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13646_high_7
NF13646_high_7
[»] chr4 (23 HSPs)
chr4 (11-311)||(9901603-9901902)
chr4 (12-311)||(12885280-12885578)
chr4 (12-311)||(3268334-3268633)
chr4 (12-311)||(10985615-10985912)
chr4 (15-292)||(49402695-49402973)
chr4 (12-231)||(3270546-3270765)
chr4 (42-311)||(45313177-45313444)
chr4 (42-307)||(8082074-8082339)
chr4 (11-311)||(12217560-12217853)
chr4 (42-311)||(26780716-26780985)
chr4 (40-297)||(17282405-17282662)
chr4 (42-311)||(25239724-25239993)
chr4 (42-311)||(13861343-13861612)
chr4 (89-311)||(16396167-16396389)
chr4 (42-311)||(28891938-28892211)
chr4 (28-311)||(21332445-21332728)
chr4 (42-205)||(15455470-15455633)
chr4 (183-311)||(26778765-26778893)
chr4 (42-154)||(34845515-34845627)
chr4 (146-311)||(15427813-15427976)
chr4 (146-311)||(15434431-15434594)
chr4 (42-84)||(41285865-41285907)
chr4 (222-311)||(18284516-18284605)
[»] chr7 (20 HSPs)
chr7 (27-313)||(2249890-2250176)
chr7 (11-311)||(29164848-29165147)
chr7 (14-311)||(30770089-30770384)
chr7 (12-311)||(21802450-21802749)
chr7 (28-311)||(20093552-20093834)
chr7 (66-311)||(7595403-7595652)
chr7 (63-311)||(22705650-22705897)
chr7 (71-311)||(38612616-38612856)
chr7 (42-311)||(47295583-47295851)
chr7 (12-232)||(9548948-9549168)
chr7 (42-311)||(18153158-18153427)
chr7 (42-307)||(21592780-21593047)
chr7 (11-162)||(28794077-28794227)
chr7 (78-311)||(30764881-30765114)
chr7 (12-123)||(22703896-22704007)
chr7 (146-311)||(21801746-21801911)
chr7 (50-206)||(18185662-18185818)
chr7 (42-84)||(6445104-6445146)
chr7 (219-274)||(40635573-40635628)
chr7 (63-152)||(11998161-11998250)
[»] chr8 (20 HSPs)
chr8 (11-311)||(11709367-11709679)
chr8 (11-311)||(24060557-24060857)
chr8 (12-260)||(18040433-18040680)
chr8 (12-311)||(18573918-18574220)
chr8 (12-308)||(32008918-32009213)
chr8 (42-311)||(41280709-41280979)
chr8 (12-311)||(2085643-2085942)
chr8 (11-311)||(7999649-7999947)
chr8 (11-232)||(7454646-7454867)
chr8 (12-298)||(24033762-24034051)
chr8 (12-311)||(22609395-22609692)
chr8 (14-311)||(33273423-33273704)
chr8 (42-297)||(25820746-25821001)
chr8 (42-200)||(10532801-10532959)
chr8 (163-311)||(10532641-10532789)
chr8 (175-311)||(17775783-17775918)
chr8 (46-105)||(17429201-17429260)
chr8 (240-313)||(7454551-7454624)
chr8 (42-112)||(9251518-9251588)
chr8 (42-94)||(1788680-1788732)
[»] chr6 (31 HSPs)
chr6 (13-311)||(18014358-18014656)
chr6 (42-311)||(14910636-14910904)
chr6 (42-311)||(18736030-18736299)
chr6 (11-274)||(12738494-12738757)
chr6 (11-311)||(23574393-23574692)
chr6 (42-310)||(15349529-15349798)
chr6 (42-307)||(29094921-29095187)
chr6 (42-313)||(15318877-15319148)
chr6 (14-311)||(18728923-18729220)
chr6 (11-311)||(29482590-29482890)
chr6 (12-311)||(15119621-15119918)
chr6 (12-311)||(4409196-4409496)
chr6 (42-311)||(18258495-18258764)
chr6 (12-307)||(24438465-24438760)
chr6 (12-206)||(7968500-7968694)
chr6 (42-311)||(15369524-15369794)
chr6 (11-206)||(19860057-19860252)
chr6 (134-311)||(21508539-21508716)
chr6 (89-311)||(17756918-17757140)
chr6 (68-311)||(3876374-3876617)
chr6 (12-206)||(8306064-8306254)
chr6 (76-192)||(23524128-23524244)
chr6 (12-143)||(18043340-18043471)
chr6 (11-141)||(14479994-14480123)
chr6 (40-151)||(6109473-6109587)
chr6 (47-106)||(19885778-19885837)
chr6 (249-311)||(19857735-19857797)
chr6 (227-311)||(18043493-18043577)
chr6 (239-311)||(27964951-27965023)
chr6 (50-84)||(14976712-14976746)
chr6 (245-311)||(23524253-23524319)
[»] scaffold0002 (2 HSPs)
scaffold0002 (11-311)||(391458-391759)
scaffold0002 (13-311)||(380763-381060)
[»] scaffold0013 (1 HSPs)
scaffold0013 (11-311)||(37127-37426)
[»] chr2 (18 HSPs)
chr2 (42-298)||(42534036-42534292)
chr2 (12-311)||(3770260-3770559)
chr2 (12-311)||(25133825-25134133)
chr2 (12-311)||(23755719-23756018)
chr2 (11-311)||(3105203-3105503)
chr2 (11-229)||(23929796-23930014)
chr2 (44-311)||(19092753-19093019)
chr2 (27-206)||(41266201-41266380)
chr2 (46-311)||(26154883-26155148)
chr2 (12-205)||(29568315-29568507)
chr2 (11-311)||(27347170-27347467)
chr2 (61-311)||(22452721-22452970)
chr2 (12-91)||(26159154-26159233)
chr2 (238-311)||(23932905-23932978)
chr2 (213-309)||(29569040-29569136)
chr2 (42-152)||(23150745-23150854)
chr2 (42-152)||(23562002-23562111)
chr2 (42-86)||(12094120-12094164)
[»] chr5 (21 HSPs)
chr5 (11-309)||(28067927-28068224)
chr5 (12-311)||(5931190-5931489)
chr5 (11-311)||(41037546-41037855)
chr5 (33-297)||(15620107-15620370)
chr5 (12-274)||(42792481-42792742)
chr5 (42-311)||(23495378-23495646)
chr5 (84-311)||(19329825-19330052)
chr5 (46-291)||(20899517-20899762)
chr5 (11-205)||(22922645-22922839)
chr5 (42-311)||(36712551-36712819)
chr5 (11-203)||(22922050-22922242)
chr5 (42-297)||(5590612-5590867)
chr5 (12-311)||(8244511-8244814)
chr5 (42-181)||(38608297-38608436)
chr5 (42-311)||(33622392-33622663)
chr5 (163-308)||(24095343-24095488)
chr5 (163-311)||(13537880-13538028)
chr5 (128-311)||(22510097-22510280)
chr5 (42-85)||(18953563-18953606)
chr5 (42-85)||(28421594-28421637)
chr5 (46-114)||(1684435-1684503)
[»] chr1 (13 HSPs)
chr1 (42-313)||(38621833-38622104)
chr1 (12-311)||(19967320-19967618)
chr1 (42-297)||(9858997-9859256)
chr1 (12-311)||(19442012-19442310)
chr1 (11-313)||(8990660-8990962)
chr1 (42-311)||(8995340-8995607)
chr1 (42-311)||(24973788-24974056)
chr1 (42-307)||(21817637-21817908)
chr1 (42-153)||(22186045-22186156)
chr1 (143-309)||(33028924-33029090)
chr1 (42-116)||(21815619-21815693)
chr1 (163-307)||(21815461-21815605)
chr1 (119-311)||(49472312-49472501)
[»] scaffold0008 (2 HSPs)
scaffold0008 (11-311)||(253312-253612)
scaffold0008 (70-311)||(242731-242972)
[»] scaffold0034 (2 HSPs)
scaffold0034 (12-235)||(47392-47615)
scaffold0034 (240-311)||(56259-56330)
[»] chr3 (16 HSPs)
chr3 (11-311)||(22915051-22915349)
chr3 (42-309)||(16852911-16853178)
chr3 (83-311)||(19790346-19790574)
chr3 (11-311)||(16914705-16915005)
chr3 (88-311)||(44635823-44636047)
chr3 (11-311)||(3559022-3559318)
chr3 (42-110)||(22006522-22006590)
chr3 (42-110)||(22014039-22014107)
chr3 (138-311)||(13016465-13016637)
chr3 (12-93)||(1998006-1998087)
chr3 (62-111)||(8733434-8733483)
chr3 (62-111)||(9085675-9085724)
chr3 (11-87)||(19773385-19773462)
chr3 (42-85)||(3786563-3786606)
chr3 (42-85)||(3824256-3824299)
chr3 (42-152)||(44451630-44451739)
[»] scaffold0026 (1 HSPs)
scaffold0026 (12-311)||(151192-151490)
[»] scaffold0150 (1 HSPs)
scaffold0150 (13-311)||(29958-30256)
[»] scaffold0111 (1 HSPs)
scaffold0111 (42-311)||(2729-2999)
[»] scaffold0083 (1 HSPs)
scaffold0083 (11-311)||(4097-4397)
[»] scaffold0042 (2 HSPs)
scaffold0042 (42-311)||(68703-68972)
scaffold0042 (11-206)||(74844-75039)
[»] scaffold0280 (1 HSPs)
scaffold0280 (15-311)||(941-1237)
[»] scaffold0170 (1 HSPs)
scaffold0170 (42-311)||(16217-16486)
[»] scaffold0192 (1 HSPs)
scaffold0192 (11-311)||(12322-12619)
[»] scaffold0058 (2 HSPs)
scaffold0058 (13-231)||(1609-1828)
scaffold0058 (11-161)||(15364-15514)
[»] scaffold0989 (1 HSPs)
scaffold0989 (12-291)||(1444-1721)
[»] scaffold0096 (1 HSPs)
scaffold0096 (42-307)||(10777-11042)
[»] scaffold0265 (3 HSPs)
scaffold0265 (42-307)||(14901-15172)
scaffold0265 (42-116)||(17116-17190)
scaffold0265 (163-307)||(17204-17348)
[»] scaffold0063 (2 HSPs)
scaffold0063 (11-311)||(36681-36979)
scaffold0063 (11-306)||(49133-49426)
[»] scaffold0362 (1 HSPs)
scaffold0362 (42-291)||(7270-7519)
[»] scaffold0084 (1 HSPs)
scaffold0084 (45-311)||(54505-54770)
[»] scaffold0011 (1 HSPs)
scaffold0011 (42-298)||(20199-20454)
[»] scaffold0483 (1 HSPs)
scaffold0483 (98-311)||(9226-9429)
[»] scaffold0299 (1 HSPs)
scaffold0299 (12-123)||(19150-19261)
[»] scaffold0025 (1 HSPs)
scaffold0025 (11-150)||(86424-86563)
[»] scaffold0101 (1 HSPs)
scaffold0101 (46-85)||(44308-44347)
[»] scaffold1272 (1 HSPs)
scaffold1272 (245-311)||(1976-2042)


Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 311
Target Start/End: Complemental strand, 9901902 - 9901603
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  9901902 cagagagtgagggttaagagggagatatcggttctaccttgaggactgctaagagtcccctatatatagaggtggagggttgcagagccgttgtaatggc 9901803  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| || ||| |||||||||| |||| ||||||||||||    
T  9901802 acacctggctctgacggttacgaaatcgtgggacgtgtaaccgctagagagattattgcgggaatgtccagagagacgttgtggttcatttgaaccgatc 9901703  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  9901702 tagctcgctccgtgcac-ccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgatatttgcgcttttgattgtattgagcctaagtaaa 9901604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 12885280 - 12885578
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    |||| |||| |||| ||||| |||||| | ||||||||||||||||| |  ||||||||||| |||| ||||||||||||||||| || |||||||||||    
T  12885280 agagggtgagggtttagaggaagagatagattctaccttggggactgttgtgagtcccctatttataaaggtggagggctgcagagccattgtaatggca 12885379  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||| | ||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||  |||||||||| |||||||||||||  |||    
T  12885380 cacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcaaagagacgttgtggttcgtttgaaccagtct 12885479  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
       ||||||| |||| ||||||||| |||||| ||| ||| ||||||||  |||||||||||| | |||| | |||||||||||||| ||||||||||||    
T  12885480 ctttcgctccatgca-cccccttgcggggaaggggtatgttgcaagtaactttgccaaacgtggtgtttgggttttggattgtattgggcctaagtaaat 12885578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 3268334 - 3268633
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| |||||||||||| | ||||||||||| |||| |   ||||||||||| |||||||||||||||||||||| || |||||||| ||    
T  3268334 agagagtgagggtttagagggagagatagattctaccttggagacttccgtgagtcccctatttatagaggtggagggctgcagagccattgtaatgaca 3268433  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||| | |||||| |||||||||| |||||||||| | |||| ||||||| ||||||||||| |||||||||| |||||||||||||  |||    
T  3268434 cacctggctctggcggttacgtaatcgtgggaagtgtaaccgccatagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtct 3268533  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
       |||||||||||||||||||||   ||||| |||||||| |||||||| ||||||||   | | |||| ||| |||||||| ||||||||||||||||    
T  3268534 ctgtcgctccgtgcaccccccttgtgtggaaggggtgtgtcacaagtaattttgccaaaatcggtgtttgggctgtggattgttttgagcctaagtaaat 3268633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 10985912 - 10985615
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| ||||  |||| |||| | | |||||||||||| |||||   ||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  10985912 agagagtgagggtttggaggaagaggtagattctaccttggg-actgccgtgagtcccctatttatagaggtggatggctgcagagccgttgtaatggca 10985814  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||  | ||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||| |||||||||| |||||||||||||  |||    
T  10985813 cacctggctctcgcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtct 10985714  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
     | |||||| ||||| ||||||||  |||||  |||||||| |||||||  |||||||||||| | ||||  ||||||||||||||| ||||||||||||    
T  10985713 cgttcgctctgtgca-cccccttgtggggaaagggtgtgtcacaagtaactttgccaaacgtggtgtttgacctttggattgtattgggcctaagtaaat 10985615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 292
Target Start/End: Original strand, 49402695 - 49402973
Alignment:
Q  15 gagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacac 114  Q
    |||||| || ||||||||||| ||   |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  49402695 gagtgagggataagagggagatatatattctactttggggactgctatgagtcccctatatatagaggtggagggctgcagagccgttgtaatggcacac 49402794  T
Q  115 ctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgc--agcgagacgttgtagttcgtttgaaccgatcta 212  Q
    | ||||||| | ||||||| ||||||| | |||||||||| | |||||||||||| | |||||||  || ||||||||||||| ||||||||||| |||     
T  49402795 caggctctggcggttacgagatcgtggaaagtgtaaccgccatagagattattgcggaaacgtgcagagagagacgttgtagtccgtttgaaccggtctt 49402894  T
Q  213 gctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggatt 292  Q
    ||| |||| ||||| |||||| ||||||||| ||||||||| |||||||  ||||||| ||| |||||| ||||| ||||    
T  49402895 gcttgctctgtgca-ccccctcgcagggaaggggtgtgtcgtaagtaatgctgccaaaagtggtatttgggctttagatt 49402973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 231
Target Start/End: Original strand, 3270546 - 3270765
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| |||||||||||| | | ||||||||||||||||   ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  3270546 agagagtgagggtttagagggagagatagatcctaccttggggactgccgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca 3270645  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    ||||||||||||   ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| || |||||||||| |||||||||||||  |||    
T  3270646 cacctggctctggtggttacgaaatcgtgggaagtgtaaccgctagagagtttattgcgggaacgtgtagtgagacgttgtggttcgtttgaaccagtct 3270745  T
Q  212 agctcgctccgtgcaccccc 231  Q
       | |||||||||||||||    
T  3270746 ctgttgctccgtgcaccccc 3270765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 45313177 - 45313444
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||| || |||| |||| ||||||||||| ||||| |||| | |||||||||||||||||| ||||||| | |||||||||||||||    
T  45313177 ttctaccttggggactgttatgagttccct-tatatagaggtagagggttgcaaatccgttgtaatggcacaccaggctctggcggttacgaaatcgtgg 45313275  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc-tagctcgctccgtgcaccccccttgcaggg 240  Q
    || |||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||  || | |||||||||||||| ||| || || | |    
T  45313276 gaagtgtaaccgccagagagattattg-gggaacgtgcagagagacgttgtagttcgtttgaaccagtctttgctcgctccgtgca-ccctctcgcggag 45313373  T
Q  241 aagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||| ||||||||||||||||| ||||||||| || |  ||| |||||| ||||||||| ||||||||||||    
T  45313374 aaggggtgtgtcgcaagtaatgttgccaaacatggtgcttgggctttgaattgtattgggcctaagtaaat 45313444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 307
Target Start/End: Original strand, 8082074 - 8082339
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||| ||  || |||||||||||||||    
T  8082074 ttctacattggggactgctaagagtcccctatatatagaggtggaggactgcagagccattgtaatggcacacctgggtccaacagttacgaaatcgtgg 8082173  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
     | |||||||||| ||||| || ||||| ||||||||||   ||| ||| | | |||||||||||| ||  ||| ||||||||||||||| | || |  |    
T  8082174 aaagtgtaaccgccagagaaataattgcgggaacgtgcaaatagatgttatggctcgtttgaaccggtcctgcttgctccgtgcacccccttcgcggaaa 8082273  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagt 307  Q
    || |||  |||||||||||| |||| ||||||| | |||| |||||||||||||||| ||||||||    
T  8082274 aggggtaagtcgcaagtaatgttgcaaaacgtggtgtttgggctttggattgtattgggcctaagt 8082339  T

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Target: chr4; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 12217560 - 12217853
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||  |||| |||||||||||| | |||||||||||||||||    ||||||||||| |||||||||||||||||||||| |||||||||        
T  12217560 cagagagtgcgggtttagagggagagatagattctaccttggggactgtcgtgagtcccctatttatagaggtggagggctgcagagccgttgtaa---- 12217655  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
      ||||||||||| | ||||||||||||| ||| |||||||||| |||||| ||||||||||||||||||| |||||||||| |||||||||||||  ||    
T  12217656 --acctggctctggcggttacgaaatcgtaggaagtgtaaccgccagagagtttattgcaggaacgtgcagagagacgttgtggttcgtttgaaccagtc 12217753  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    |   ||||||||||||||||| | |   ||||| ||||||| ||||||||| |||| ||||| | | |||| ||| |||||||||||  | |||||||||    
T  12217754 tctgtcgctccgtgcacccccat-gtgtggaaggggtgtgttgcaagtaattttgctaaacgcggtgtttgggctgtggattgtattaggactaagtaaa 12217852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 26780985 - 26780716
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||| || || ||||||||| | ||||||||||||||||||| ||||||||||| |||||| | |||||   ||||||||| |||||    
T  26780985 ttctaccttggggactgttatgactcccctatacagagaggtggagggctgcagagccgttgtaatgacacaccagactctggtggttacgaaaacgtgg 26780886  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || |||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||||| |||  || | || |||| | |||||||||  ||| ||    
T  26780885 gaagtgtaaccgccagagagattattgcgggaacgtgcagagaaacgttgtggttcgtttgagccggccttgttctctccctacacccccctcacagaga 26780786  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || ||||||| ||||||||| |||||||||||| | |||| |||||| || |||||| ||||| ||||||    
T  26780785 aggggtgtgtagcaagtaatgttgccaaacgtggtgtttgggctttgaatagtattgggcctatgtaaat 26780716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 40 - 297
Target Start/End: Complemental strand, 17282662 - 17282405
Alignment:
Q  40 ggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgt 139  Q
    ||||||||||||||||||||   ||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||| ||||    
T  17282662 ggttctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacaccttactctgacggttacgaattcgt 17282563  T
Q  140 gggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagg 239  Q
    |||| ||||||||||| | | | ||||||| |||||||| |  |||||||||  ||||||| |||||  |||   ||| ||||||||||||||| ||  |    
T  17282562 gggaagtgtaaccgcttgtgggtttattgcgggaacgtggaaagagacgttggggttcgttagaaccagtctctttcgttccgtgcacccccctcgcgtg 17282463  T
Q  240 gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtatt 297  Q
    |||| |||||||||| |||||| |||||||||||| | | || |||||||| ||||||    
T  17282462 gaaggggtgtgtcgcgagtaattttgccaaacgtggtgtctgggctttggagtgtatt 17282405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 25239724 - 25239993
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||    |||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||| ||||    
T  25239724 ttctaccttggggactgcatttagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacaccttactctgacggttacgaaattgtgg 25239823  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || ||||||||||  | ||| ||||||| |||||||| |  ||||| |||  |||||||||||||  |||   ||| ||||||||||||||| ||  | |    
T  25239824 gaagtgtaaccgcctgtgagtttattgcgggaacgtggaaagagactttggggttcgtttgaaccagtctctttcgttccgtgcacccccctcgcgtgaa 25239923  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||||| |||||| ||| |||||||| | |||  |||||||| ||||||| ||||||||||||    
T  25239924 agaggtgtgtcgcgagtaattttgtcaaacgtggtgtttaggctttggagtgtattgggcctaagtaaat 25239993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 13861343 - 13861612
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   |||| |||||| |||||||||||||||||||| | |||||||||||||||||||  |||| || |||||||||||||||    
T  13861343 ttctaccttggggactgcattgagttccctatttatagaggtggagggctgcaaagccgttgtaatggcacaccttactctaacagttacgaaatcgtgg 13861442  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || ||||||| ||  | ||| ||||||| |||||||| |  |||||||||  |||||||||||||| | |   ||| ||||||||||||||| ||  |||    
T  13861443 gaagtgtaactgcctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccggtatctttcgttccgtgcacccccctcgcgtgga 13861542  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || |||||||||| |||||| || ||| ||||| | |||| ||||||||| |||||| ||||||||||||    
T  13861543 aggggtgtgtcgcgagtaattttaccagacgtggtgtttgggctttggatggtattgggcctaagtaaat 13861612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 89 - 311
Target Start/End: Complemental strand, 16396389 - 16396167
Alignment:
Q  89 gctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacg 188  Q
    |||||||| |||||||| ||||||||||| ||||| |  ||| |||||| ||||| |||||||||| |||| | ||||||| |||||||| || ||||||    
T  16396389 gctgcagagccgttgtagtggcacacctgactctggcgattaggaaatcatgggaagtgtaaccgccagagtgtttattgcgggaacgtgtagagagacg 16396290  T
Q  189 ttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttg 288  Q
    |||| ||||| |||||||  ||| ||| |||||||||||||||||||  || ||| ||||||||||||||||  |||||||||||| | |||  ||||||    
T  16396289 ttgtggttcgcttgaaccagtctcgcttgctccgtgcaccccccttgtgggaaaggggtgtgtcgcaagtaactttgccaaacgtggtgttttggctttg 16396190  T
Q  289 gattgtattgagcctaagtaaat 311  Q
    |||||||||| ||||||||||||    
T  16396189 gattgtattgggcctaagtaaat 16396167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 28891938 - 28892211
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctc----tgactgttacgaaatc 137  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| |||||| | |||||||||||||||| |||| ||    || | ||| |||||||    
T  28891938 ttctaccttggggactcttaagagtcccctatatatagaggtggagagctgcatagccgttgtaatggcacatctgggtccggttggcagttgcgaaatc 28892037  T
Q  138 gtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgca 237  Q
    |||||| |||||||| | ||||| || ||||  | ||||||||  |||||||||| |||||||||||| | ||| ||| ||||||||||| ||| | ||     
T  28892038 gtgggaagtgtaaccaccagagaaataattgtggaaacgtgcaaagagacgttgtggttcgtttgaacaggtcttgcttgctccgtgcactcccttcgcg 28892137  T
Q  238 gggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    | |||| ||| ||||||||||||| ||| |||||||| | ||||  |||| |||||||||| |||||| |||||    
T  28892138 gagaaggggtatgtcgcaagtaatgttggcaaacgtggtgtttgaactttagattgtattgggcctaaataaat 28892211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 311
Target Start/End: Complemental strand, 21332728 - 21332445
Alignment:
Q  28 gagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactg 127  Q
    |||| |||||| | |||||||||||  ||||||  ||||||||||| || ||||||||||||||||||| |||||||| ||||||||||||||||| |      
T  21332728 gaggaagagatagattctaccttggaaactgctttgagtcccctatttacagaggtggagggctgcagagccgttgtagtggcacacctggctctggcgc 21332629  T
Q  128 ttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcac 227  Q
    |||||||||| ||||| || ||||||| ||| || ||||||  |||||||| || |||||||||| |||||||||||||  |||   |||||| ||||||    
T  21332628 ttacgaaatcatgggaagtataaccgccagaaagtttattgtgggaacgtgtagagagacgttgtggttcgtttgaaccagtctctttcgctctgtgcac 21332529  T
Q  228 cccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||| |    || ||| ||||||||||||||||  |||||||||||  | ||||  ||||| |||||||||  |||||||||||    
T  21332528 ccccttgtgtggaaaggggtgtgtcgcaagtaactttgccaaacgtagtgtttggactttgaattgtattggacctaagtaaat 21332445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 205
Target Start/End: Original strand, 15455470 - 15455633
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||| |||| |  |||||| | ||||||||||  | || | |||| |||||  |||    
T  15455470 ttctaccttggggactgctaagagtcttatatatatagaggtggagggatgcaaagtcgttgtgaaggcacacctgtgtttggcggttatgaaataatgg 15455569  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaac 205  Q
    || |||||| ||| ||||| || ||||||| ||||||||  |||||||||| | ||||||||||    
T  15455570 gaagtgtaaacgcaagagaaataattgcagaaacgtgcaaagagacgttgtggctcgtttgaac 15455633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 26778893 - 26778765
Alignment:
Q  183 gagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgt 282  Q
    |||||||||| |||||||||||||| ||| | |||||  |||||||||||| || | |||| |||| |||||||||||| ||| ||||| || | ||||     
T  26778893 gagacgttgtggttcgtttgaaccggtcttgttcgctatgtgcacccccctcgcggagaaggggtgggtcgcaagtaatgttgtcaaacatggtgtttga 26778794  T
Q  283 gctttggattgtattgagcctaagtaaat 311  Q
    |||||| || |||||||||||||||||||    
T  26778793 gctttgaatagtattgagcctaagtaaat 26778765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 34845627 - 34845515
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||||||||| | ||| ||||| |||||||||||||  |  ||||||  |||||||||||||||| ||  |||||| |||||||||||||||    
T  34845627 ttctaccttggggactgcgaggagccccctttatatagaggtgggtgaatgcagagtcgttgtaatggcacacatgtgtctgacggttacgaaatcgtgg 34845528  T
Q  142 gatgtgtaaccgc 154  Q
    || ||||||||||    
T  34845527 gaagtgtaaccgc 34845515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 311
Target Start/End: Original strand, 15427813 - 15427976
Alignment:
Q  146 tgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagag 245  Q
    ||||| ||||||||| || ||||| ||||||||||  || ||||||| | ||||  |||| | ||| ||| ||||||||||||||  | || || ||| |    
T  15427813 tgtaaacgctagagaaataattgcgggaacgtgcaaagaaacgttgtggctcgtaggaactggtctcgcttgctccgtgcacccctttcgcgggaaaggg 15427912  T
Q  246 gtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||| ||||||||  ||||||| ||| || || ||||||||||||| ||||||||||||    
T  15427913 gtgtgtcgcaaataatattgtgaaacgtggtatatg-gc-ttggattgtattgggcctaagtaaat 15427976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 311
Target Start/End: Original strand, 15434431 - 15434594
Alignment:
Q  146 tgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagag 245  Q
    ||||| ||||||||| || ||||| ||||||||||  || ||||||| | ||||  |||| | ||| ||| ||||||||||||||  | || || ||| |    
T  15434431 tgtaaacgctagagaaataattgcgggaacgtgcaaagaaacgttgtggctcgtaggaactggtctcgcttgctccgtgcacccctttcgcgggaaaggg 15434530  T
Q  246 gtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||| ||||||||  ||||||| ||| || || ||||||||||||| ||||||||||||    
T  15434531 gtgtgtcgcaaataatattgtgaaacgtggtatatg-gc-ttggattgtattgggcctaagtaaat 15434594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 41285907 - 41285865
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtg 84  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  41285907 ttctaccttggggactgcgaagagtcccctttatatagaggtg 41285865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 18284605 - 18284516
Alignment:
Q  222 gtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||||| ||||| ||  ||||| |||||||||  |||||| |||||||||||| | |||| ||||||||| |||||| |||||| |||||    
T  18284605 gtgcactcccctcgcgtggaaggggtgtgtcgtgagtaattttgccaaacgtgatgtttgggctttggatggtattgggcctaattaaat 18284516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 3e-82; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 313
Target Start/End: Complemental strand, 2250176 - 2249890
Alignment:
Q  27 agagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgact 126  Q
    ||||| |||||| | |||||| ||||||  ||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||| || |     
T  2250176 agaggaagagatagattctacattggggtttgctatgagtcccctatatatagaggtggagggttgcagagccgttgtaatggcacaccaggctttggcg 2250077  T
Q  127 gttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgca 226  Q
    ||||| |||||||||||  ||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||||||||  ||| ||| ||||||||||    
T  2250076 gttacaaaatcgtgggaattgtaaccgctagagatattattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtcttgcttgctccgtgca 2249977  T
Q  227 ccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaatag 313  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||| ||||||||| |  |||||||||||    
T  2249976 ccccccttgcggggaaggggtgtgtcgcaagtaatgttgccaaacgtggtatttgagctttgaattgtattgggaataagtaaatag 2249890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 29164848 - 29165147
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||| | |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||||| |    
T  29164848 cagagagtgagggtttagaggaagagatagattctaccttggggactgctatgagtcccctatttatagaggtggacggctgcagagccgttgtaatgac 29164947  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||| ||||    ||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||| |||||||||||||  ||    
T  29164948 acacctgactctagaagttacgaaatcgtgggaagtgtaactgctagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtc 29165047  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | | |||||||||||| ||||||||  || ||| |||||||| |||||||  |||||||||||| | |||| ||||||| |||||||| |||||| ||||    
T  29165048 tcgttcgctccgtgca-cccccttgtgggaaaggggtgtgtcacaagtaactttgccaaacgtggtgtttgggctttgggttgtattgggcctaaataaa 29165146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 311
Target Start/End: Complemental strand, 30770384 - 30770089
Alignment:
Q  14 agagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcaca 113  Q
    ||||||| |||| ||||| |||||| | |||||||||||||||||||  ||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  30770384 agagtgagggtttagaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagtgctgcagagccgttgtaatggcaca 30770285  T
Q  114 cctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctag 213  Q
    |||||||||| | ||||||||||||||| | ||||||| || | |||| ||||||| |||||||| || |||||||||| |||||||||||||  ||       
T  30770284 cctggctctggcggttacgaaatcgtggaaagtgtaactgccaaagagtttattgcgggaacgtgtagagagacgttgt-gttcgtttgaaccagtccct 30770186  T
Q  214 ctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
     |||||||||||| ||||||||   ||||| ||||||||||||||||  | | |||||||| | |||| |||||| ||||||||| ||||||||||||    
T  30770185 ttcgctccgtgca-cccccttgtgtggaaggggtgtgtcgcaagtaacttcgtcaaacgtgatgtttgggctttgaattgtattgggcctaagtaaat 30770089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 21802450 - 21802749
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | |||||||||||||||||||  ||||||||||| ||||||||| ||||||| |||| ||||||||||||||    
T  21802450 agagagtgagggtttagaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggttgagggctacagagccgttgtaatggca 21802549  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    ||||||||||||   ||||||||||||| ||| ||||||| || |||||| |||||||  |||| ||||| |||||||||| |||||| ||||||  |||    
T  21802550 cacctggctctggtggttacgaaatcgtaggaagtgtaacagcgagagagtttattgcgagaacctgcagagagacgttgtggttcgtctgaaccagtct 21802649  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
       ||||||||||||||||||||||  |||||  |||||| | ||||||  ||| |||||||| | |||| ||||| |||||||||  ||||||||||||    
T  21802650 ccttcgctccgtgcaccccccttgcgtggaaggcgtgtgttgaaagtaactttgacaaacgtggtgtttgagctttagattgtattcggcctaagtaaat 21802749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 28 - 311
Target Start/End: Original strand, 20093552 - 20093834
Alignment:
Q  28 gagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactg 127  Q
    ||||||||||| | ||||||||||||||||||   ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||  | |    
T  20093552 gagggagagatagtttctaccttggggactgccgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggccctagcgg 20093651  T
Q  128 ttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcac 227  Q
    |||||||||||||||| |||||||| | | |||| ||||||| |||| |||||| |||||||||| |||||||||||||  |||   ||||||||||||     
T  20093652 ttacgaaatcgtgggaagtgtaaccaccaaagagcttattgcgggaatgtgcagagagacgttgtggttcgtttgaaccagtctctgtcgctccgtgca- 20093750  T
Q  228 cccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||| ||||   ||||| ||| ||| ||||||||  ||| |||||||| | ||||  |||||||||||||||  |||||||||||    
T  20093751 ccctcttgtgtggaaggggtttgttgcaagtaactttgacaaacgtggtgtttggactttggattgtattggacctaagtaaat 20093834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 66 - 311
Target Start/End: Original strand, 7595403 - 7595652
Alignment:
Q  66 tcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagatta 165  Q
    |||||||| |||||||||||||||||||| | |||||||||| ||||||||||| |||  |||||||||||||||||| |||||||||| |||||| |||    
T  7595403 tcccctatttatagaggtggagggctgcaaagccgttgtaatagcacacctggcgctggatgttacgaaatcgtgggaagtgtaaccgccagagagttta 7595502  T
Q  166 ttgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccc----cttgcagggaagaggtgtgtcgcaagtaat 261  Q
    |||| ||||||||||| ||||| |||| |||||||||||||| ||| |||||||||||||||||||    | ||  |||||| ||||||| ||||||||     
T  7595503 ttgcgggaacgtgcagagagacattgtggttcgtttgaaccggtctcgctcgctccgtgcacccccccctcctgtggggaaggggtgtgttgcaagtaag 7595602  T
Q  262 attgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
     ||||||| |||| | |||  |||||| ||||||||| |||| |||||||    
T  7595603 tttgccaagcgtggtgtttaagctttgaattgtattgggcctgagtaaat 7595652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 63 - 311
Target Start/End: Original strand, 22705650 - 22705897
Alignment:
Q  63 gagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagaga 162  Q
    ||||||| ||| |||||||||||||| ||||||| || ||||||||||||||||||||||| | ||||||||||| ||||| ||||||||| ||||||      
T  22705650 gagtcccgtatttatagaggtggaggactgcagagccattgtaatggcacacctggctctggcggttacgaaatcatgggaagtgtaaccggtagagaat 22705749  T
Q  163 ttattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaata 262  Q
    ||||||||||||||||||| || ||||||| ||||||||||||   |||   ||||||||||||||| ||||||| ||||| ||||||| ||||||||      
T  22705750 ttattgcaggaacgtgcagagaaacgttgtggttcgtttgaactagtctctttcgctccgtgcacccgccttgcatggaaggggtgtgttgcaagtaact 22705849  T
Q  263 ttgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||| |||||||| |  |||  ||||||||||||||| ||||||||||||    
T  22705850 ttgtcaaacgtggt-gttggactttggattgtattgggcctaagtaaat 22705897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 71 - 311
Target Start/End: Original strand, 38612616 - 38612856
Alignment:
Q  71 tatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgca 170  Q
    |||||||||||||||||  ||||||| |||||||||||| ||||| ||||||| | ||||| ||||||||||| ||||||| || |||||||||||||      
T  38612616 tatatatagaggtggagatctgcagagccgttgtaatggtacaccaggctctggcggttacaaaatcgtgggaagtgtaactgccagagagattattgtg 38612715  T
Q  171 ggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaa 270  Q
    ||||||||||| | |||||||| ||||||||||||||  |  ||| |||||||||| |||||| ||  ||||| ||||| | ||||||||| ||||||||    
T  38612716 ggaacgtgcagagggacgttgtggttcgtttgaaccggccctgcttgctccgtgcaaccccctcgcgaggaaggggtgttttgcaagtaatgttgccaaa 38612815  T
Q  271 cgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||| | |||| |||||| || |||||||||||||||||||    
T  38612816 cgtggtgtttgggctttgaatagtattgagcctaagtaaat 38612856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 47295851 - 47295583
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   ||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||    
T  47295851 ttctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacaccttactctgacggttacgaaatcgtgg 47295752  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || |||||| |||| | ||| ||||||| |||| ||| || |||||||||  |||||||||||||  |||   ||| |||||||| |||||| ||  |||    
T  47295751 gaagtgtaaacgcttgtgagtttattgcgggaaggtggagagagacgttggggttcgtttgaaccagtctccttcgttccgtgca-ccccctcgcgtgga 47295653  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |  |||||||||| |||||| || ||||||||| | |||| |||||| | |||||||  |||||||||||    
T  47295652 atgggtgtgtcgcgagtaatttttccaaacgtggtgtttgggctttgtagtgtattggacctaagtaaat 47295583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 232
Target Start/End: Complemental strand, 9549168 - 9548948
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | || ||||||||||||| ||  ||||||||| | |||| ||||||||||||||||| ||||||||  ||||    
T  9549168 agagagtgagggtttagaggaagagatagattttaccttggggactactttgagtcccctttttataaaggtggagggctgcagagccgttgtagaggca 9549069  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||  | ||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||| ||||||||||  ||||||||||||  |||    
T  9549068 cacctggctctagcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtgtttcgtttgaaccagtct 9548969  T
Q  212 agctcgctccgtgcacccccc 232  Q
     ||| ||||| ||| ||||||    
T  9548968 cgcttgctccatgcccccccc 9548948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 18153158 - 18153427
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||||| |||   ||||||||||| ||||||||||||||||||| ||  ||||||||||||||| ||  ||||||| |||||||||| ||||    
T  18153158 ttctaccttggggaatgcattgagtcccctatttatagaggtggagggctgccgagtcgttgtaatggcacagcttactctgacggttacgaaatggtgg 18153257  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || ||||||||||  | ||| ||||||  |||||||| |  |||||||||  |||||||||||||  |||   | | ||||||||||||||| ||  |||    
T  18153258 gaagtgtaaccgcctgcgagtttattgtgggaacgtggaaagagacgttggggttcgtttgaaccagtctcttttgttccgtgcacccccctcgcgtgga 18153357  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || |||||||||| |||||| ||||||||| || | |||| |||||| | ||||||| ||||||||||||    
T  18153358 aggggtgtgtcgcgagtaattttgccaaacatggtgtttgggctttgtagtgtattgggcctaagtaaat 18153427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 307
Target Start/End: Complemental strand, 21593047 - 21592780
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   ||||||||||| ||||||||||||||||||| || |||||||||||||||||||  ||||||| ||||| |||||||||    
T  21593047 ttctaccttggggactgcattgagtcccctatttatagaggtggagggctgctgagccgttgtaatggcacaccttactctgacggttacaaaatcgtgg 21592948  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgca--ccccccttgcagg 239  Q
    || |||||||||   |  || ||||| | |||||||| |  |||||||||  |||||||||||||  |||   ||| ||||||||  ||||||| ||  |    
T  21592947 gaagtgtaaccgtctgttagcttattacgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcacccccccctcgcgtg 21592848  T
Q  240 gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagt 307  Q
    |||| |||||||||| |||||| | ||||||| || | ||||  |||||||| |||||| ||||||||    
T  21592847 gaaggggtgtgtcgcgagtaatttagccaaacatggtgtttggactttggatggtattgggcctaagt 21592780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 28794227 - 28794077
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||| ||| |||| ||||||||| || | ||||||||||||||||| ||||||||||||||||||| |||||   ||||||| | |||||||||||||    
T  28794227 cagagaatgagggtttagagggaga-atagattctaccttggggactgttaagagtcccctatatataaaggtgagtggctgcatagccgttgtaatggc 28794129  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagaga 162  Q
    |||| ||  |||||| ||||||||||||||||| |||||||||| |||||||    
T  28794128 acacgtgtgtctgacggttacgaaatcgtgggaagtgtaaccgccagagaga 28794077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 311
Target Start/End: Complemental strand, 30765114 - 30764881
Alignment:
Q  78 agaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgt 177  Q
    ||||||||||||||||||| | |||||| |||||||||| | || ||| | ||||||||||||||| |||||||||| ||||| || ||||| |||| ||    
T  30765114 agaggtggagggctgcagagctgttgtagtggcacacctaggtccgacgggtacgaaatcgtgggaagtgtaaccgccagagaaataattgcgggaatgt 30765015  T
Q  178 gcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgcta 277  Q
    |||  ||||| |||| ||||| |||||||  ||  ||| |||| |||||| ||||| || | |||| ||| ||||||||||||  ||||||||||||       
T  30765014 gcaaagagacattgtggttcgcttgaaccagtcctgcttgctctgtgcactcccctcgcggtgaaggggtatgtcgcaagtaaatttgccaaacgtggag 30764915  T
Q  278 tttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||  |||| |||||||||||  |||||||||||    
T  30764914 tttaagcttgggattgtattggacctaagtaaat 30764881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 22703896 - 22704007
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| |||||  ||||| | |||||||||||||||||||  ||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  22703896 agagagtgagggtttagaggacgagatagattctaccttggggactgctgtgagtcccatatttatagaggtggagggctgcagagccgttgtaatggca 22703995  T
Q  112 cacctggctctg 123  Q
    ||||||| ||||    
T  22703996 cacctggttctg 22704007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 146 - 311
Target Start/End: Complemental strand, 21801911 - 21801746
Alignment:
Q  146 tgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagag 245  Q
    ||||||||| |||||  ||||||| ||||||||||| |||||||||| ||||||||||| || ||| ||||||||| | |||||||||||||||  ||      
T  21801911 tgtaaccgccagagaacttattgcgggaacgtgcagagagacgttgtggttcgtttgaatcggtcttgctcgctccttacaccccccttgcaggagagga 21801812  T
Q  246 gtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||||| ||||||||  || ||||||||| | |||| | ||| ||| |||||| ||||||||||||    
T  21801811 gtgtgttgcaagtaagttttccaaacgtggtgtttgggttttagatagtattgggcctaagtaaat 21801746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 50 - 206
Target Start/End: Original strand, 18185662 - 18185818
Alignment:
Q  50 tggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgta 149  Q
    ||||||||||   |||||||||||  ||| | ||||||||||||||| ||||| ||| |||||||||  ||||||| |||||||||||| |||| |||||    
T  18185662 tggggactgcattgagtcccctattaataaatgtggagggctgcagagccgttttaacggcacaccttactctgacggttacgaaatcgcgggaagtgta 18185761  T
Q  150 accgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaacc 206  Q
    |||||| | ||| ||||||| ||||| || |  |||||||||  |||||||||||||    
T  18185762 accgcttgcgagtttattgcgggaacatggaaagagacgttggggttcgtttgaacc 18185818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 6445104 - 6445146
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtg 84  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  6445104 ttctaccttggggactgcaaagagtcccctttatatagaggtg 6445146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 40635628 - 40635573
Alignment:
Q  219 tccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtg 274  Q
    |||||||||||| || ||| ||||||||| |||||| |||||| ||||||||||||    
T  40635628 tccgtgcacccctctcgcatggaagaggtttgtcgcgagtaattttgccaaacgtg 40635573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 11998250 - 11998161
Alignment:
Q  63 gagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaacc 152  Q
    ||||||||| |||||||||||||  |  |||||| ||||||||||||||||| ||  |||||| | ||| |||| | |||| ||||||||    
T  11998250 gagtcccctttatatagaggtgggtgaatgcagagccgttgtaatggcacacatgtgtctgacagctacaaaatagggggaagtgtaacc 11998161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 11709367 - 11709679
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||| ||||| ||||||||||||||||||| |||||||||  |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  11709367 cagatagtgagggttaagagggagagatcgattctacctttcggactgctgagagtcccctatatatagaggtggagggttgcagagccgttgtaatggc 11709466  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||| ||||||| |  |||||||||||||||| |||||||||| |||||||||||||  ||||||||||| |||||||||| |||||||||||||||||    
T  11709467 acaccaggctctggcatttacgaaatcgtgggaagtgtaaccgccagagagattattgtgggaacgtgcagagagacgttgtggttcgtttgaaccgatc 11709566  T
Q  211 tagctcgctccgtgca------------ccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattg 298  Q
    | |||   ||||||||            ||||||| || | |||| ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  11709567 ttgcttattccgtgcacccccccccccccccccctcgcggtgaaggggtgtgtcgcaagtaatattgtcaaacgtggtatttgggctttggattgtattg 11709666  T
Q  299 agcctaagtaaat 311  Q
     ||||||||||||    
T  11709667 ggcctaagtaaat 11709679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 24060557 - 24060857
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||| ||||| |||| ||||| || ||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  24060557 cagatagtgagggtttagaggaagcgatagattctaccttggagactgctaagagtcccttatatatagaggtggagggctgcagagccgttgtgatggc 24060656  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||| ||||||| | ||||| ||||||| ||| ||||||| || |||||||||||||||||||| ||||| |||| ||||| ||||||| |||||| ||    
T  24060657 acaccaggctctggcggttacaaaatcgtaggaagtgtaactgccagagagattattgcaggaacatgcagagagatgttgtggttcgttagaaccggtc 24060756  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | ||| |||||||||||| |||| || |||||| ||||||||||||||||| || || |||||| |||||   ||||||||||||||| |||||||||||    
T  24060757 ttgcttgctccgtgcacctccctcgcggggaaggggtgtgtcgcaagtaatgtttcctaacgtggtatttcgactttggattgtattgggcctaagtaaa 24060856  T
Q  311 t 311  Q
    |    
T  24060857 t 24060857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 18040680 - 18040433
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | |||||||||||||||||||  ||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  18040680 agagagtgaaggtttagaggaagagattgattctaccttggggactgctt-gagtcccctatttatagaggtggagagctgcagagccgttgtaatggca 18040582  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||||| ||||||||||||||||| |||||||||| | |||| ||||||| ||||||||||| |||||||||| |||||||||||||  |||    
T  18040581 cacctggctctgacggttacgaaatcgtgggaagtgtaaccgccatagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtct 18040482  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaa 260  Q
       ||||||||||||||| |||||   ||||| |||||||| |||||||    
T  18040481 ctttcgctccgtgcacccaccttgtgtggaaggggtgtgtcacaagtaa 18040433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 18574220 - 18573918
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctacctt---ggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatg 108  Q
    |||||||||  ||| ||||| |||||| | |||||||||   ||||| ||||  ||||||||||| |||||||||||||||||||||| |||||||||||    
T  18574220 agagagtgagagtttagaggaagagatagattctaccttcttggggaatgctttgagtcccctatttatagaggtggagggctgcagagccgttgtaatg 18574121  T
Q  109 gcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccga 208  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||| |||||| ||||||  ||||||||||| |||||||||| |||||||||||||      
T  18574120 gcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgtgggaacgtgcagagagacgttgtggttcgtttgaaccac 18574021  T
Q  209 tctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagta 308  Q
    |||   | ||||| |||||||||||||   ||||| | ||||||||||||||  |||||||||||| | |||| |||||| ||||||||  |||||||||    
T  18574020 tctcttttgctccatgcaccccccttgtgtggaagggatgtgtcgcaagtaactttgccaaacgtggtgtttgggctttgcattgtattaggcctaagta 18573921  T
Q  309 aat 311  Q
    |||    
T  18573920 aat 18573918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 12 - 308
Target Start/End: Complemental strand, 32009213 - 32008918
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | || ||||||||||| | ||  ||||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  32009213 agagagtgagggtttagaggaagagatagattttaccttggggagtactttgagtcccctatttatagaggtggagggctgtagagccgttgtaatggca 32009114  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||| ||||| | ||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||  |||    
T  32009113 cacctgactctggcggttacgaaatcgtgggaagtgtaatcgctagagagattattgcgggaacgtgcagagagacgctgtggttcgtttgaaccagtct 32009014  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagta 308  Q
       |||||||||||| ||||||||   ||||| |||||||| |||||||  ||| |||||||| | |||| ||||| |||||||||| |||||||||    
T  32009013 ctttcgctccgtgca-cccccttgtgaggaaggggtgtgtcacaagtaactttgtcaaacgtggtgtttgggctttcgattgtattgggcctaagta 32008918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 41280979 - 41280709
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||   ||||| |||||||||    
T  41280979 ttctaccttggggactgttatgagtcccctatttatagaggtggaggactgcagagccgttgtaatggcacacctgactctgggggttacaaaatcgtgg 41280880  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || |||||||||| |||||| ||||||| ||||||||||| ||| |||||| | |||||||||||| ||| |||||||||||||||||||| |   | ||    
T  41280879 gaagtgtaaccgccagagagtttattgcgggaacgtgcagagag-cgttgtggctcgtttgaaccggtcttgctcgctccgtgcacccccccttgtgcga 41280781  T
Q  242 a--gaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |  | ||||||||||||||||| ||||||||| || | |||| |||||||||||| ||| ||||||||||||    
T  41280780 aagggggtgtgtcgcaagtaatgttgccaaacatggtgtttgggctttggattgtgttgggcctaagtaaat 41280709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 2085942 - 2085643
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | ||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2085942 agagagtgagggtttagaggaagagatagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagaaccgttgtaatggca 2085843  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||| | ||||||||||||||||| ||||||  || ||   | ||||||| ||||| ||||| ||||| |||| ||||||||||||   |||    
T  2085842 cacctggctctggcggttacgaaatcgtgggaagtgtaattgccaggtcgtttattgcgggaacatgcagagagacattgtggttcgtttgaactagtct 2085743  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
       |||||||||| |||||||||||  ||||| ||||||| ||||||||  || ||||||||| | |||  |||||| |||| |||| ||||||||||||    
T  2085742 ctttcgctccgtgtaccccccttgcttggaaggggtgtgttgcaagtaacttttccaaacgtggtgtttaggctttgaattgcattgggcctaagtaaat 2085643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 7999649 - 7999947
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||| | ||||||||||||||||||   ||||| ||| | |||||||||||||| ||||||  ||||||||||| |    
T  7999649 cagagagtgagggtttagaggaagagatagattctaccttggggactgccgtgagtctcctgtttatagaggtggaggactgcag--ccgttgtaatgac 7999746  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||||||||| | ||||||||||||||||| |||||||||| |||||| ||||||| ||||| ||||| |||||||||| ||||||| |||||  ||    
T  7999747 acacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacatgcagagagacgttgtggttcgttggaaccagtc 7999846  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    |   ||||||||||||| | |||||   ||||| ||||||||||||||||| |||||||||| | | || | | | |||||||||||| |||||||||||    
T  7999847 tctgtcgctccgtgcactcgccttgtgtggaaggggtgtgtcgcaagtaattttgccaaacgcggtgttcgggttgtggattgtattgggcctaagtaaa 7999946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 7454867 - 7454646
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| | ||| |||||| | ||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  7454867 cagagagtgagggtttacaggaagagatagattctaacttggggactgctatgagtcccctatttatagaggtggaaggctgcagagccgttgtaatggc 7454768  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||||||||| | ||||||||||||||||| |||||||||  | |||| ||||||  ||||||||||  |||||||||| | |||| ||||||| ||    
T  7454767 acacctggctctggcggttacgaaatcgtgggaagtgtaaccgtcatagagtttattgtgggaacgtgcatagagacgttgtggctcgtatgaaccggtc 7454668  T
Q  211 tagctcgctccgtgcacccccc 232  Q
    | ||||||||||||||||||||    
T  7454667 tcgctcgctccgtgcacccccc 7454646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 298
Target Start/End: Original strand, 24033762 - 24034051
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtccccta--tata-tagaggtggagggctgcagaaccgttgtaatg 108  Q
    ||||||||| |||| ||||| |||||| | |||||| ||||||||||||| ||||||||||  |||| || |||||||||| |||||| |||||||||||    
T  24033762 agagagtgaaggtttagaggaagagatagattctacattggggactgctatgagtcccctagttataatataggtggagggttgcagagccgttgtaatg 24033861  T
Q  109 gcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccga 208  Q
    |||||| || || || | ||||||||||||||| | |||||||||| |||||| ||||||| ||||||||||| ||||| |||| |||||||||||||      
T  24033862 gcacacttgactttggcggttacgaaatcgtggaaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacattgtggttcgtttgaaccag 24033961  T
Q  209 tctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattg 298  Q
    ||| | |  ||||||||||||||||||  || ||| |||||| |||||||||  ||||| |||||| | |||  | ||||||||||||||    
T  24033962 tctcgttttctccgtgcaccccccttgtgggaaaggggtgtgacgcaagtaactttgccgaacgtggtgtttaggatttggattgtattg 24034051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 22609692 - 22609395
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatgg-- 109  Q
    ||||||||| ||||  |||| |||||| | ||||| ||| |||| || ||||||||||  |||||||||||||||||| ||||||  |||||| ||||      
T  22609692 agagagtgagggttttgaggaagagattgattctatctttgggattgttaagagtccc--atatatagaggtggagggttgcagagtcgttgtgatggta 22609595  T
Q  110 cacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgat 209  Q
    |||||||||||||| | |||||||||||||| ||||||||||||  |||||| |||||||  |||| ||||| ||||  | || ||||||||||||| ||    
T  22609594 cacacctggctctggcggttacgaaatcgtgagatgtgtaaccgacagagagtttattgcgtgaacatgcagagagatatcgtggttcgtttgaaccaat 22609495  T
Q  210 ctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaa 309  Q
    || ||||||||||||||| ||||| ||||||||| | ||||| |||| |||| ||| ||||| || | |||| |||||||| ||||||| ||||||||||    
T  22609494 ctcgctcgctccgtgcac-cccctcgcagggaagggatgtgttgcaaataatgttgtcaaacatggtgtttgggctttgga-tgtattgggcctaagtaa 22609397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 311
Target Start/End: Complemental strand, 33273704 - 33273423
Alignment:
Q  14 agagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcaca 113  Q
    ||||||| |||| ||||  |||||| | |||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||    
T  33273704 agagtgagggtttagagaaagagatagattctaccttggggactcctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatggcaca 33273605  T
Q  114 cctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctag 213  Q
    | ||| ||                |||||| |||||||||| | |||  ||||||| ||||||||||| |||||||||| | |||||||||||| ||| |    
T  33273604 cttggttc----------------gtgggaagtgtaaccgccatagaacttattgcgggaacgtgcagagagacgttgtggctcgtttgaaccggtcttg 33273521  T
Q  214 ctcgctccgtgcaccccccttgcagg-gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||  ||||||||||||| || ||||| |||||| ||||||||  |||||||||||| | |||| ||||||||| |||||  ||||||||||||    
T  33273520 ctcgctcctcgcaccccccttgcgggagaaga-gtgtgttgcaagtaaatttgccaaacgtggtgtttgggctttggatagtattaggcctaagtaaat 33273423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 297
Target Start/End: Original strand, 25820746 - 25821001
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||| ||||||||||   ||||||||||| | |||||||||||||||||| | |||||||||||||||||||  ||||||| |||||||||||||||    
T  25820746 ttctaccatggggactgcattgagtcccctatttttagaggtggagggctgcaaagccgttgtaatggcacaccttactctgacggttacgaaatcgtgg 25820845  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || ||||||||||  | ||| ||||||| |||||||| |  |||||||||  ||||||||||| || |     ||| | |||||||||||||  || |||    
T  25820846 gaagtgtaaccgcctgtgagtttattgctggaacgtggaaagagacgttggggttcgtttgaatcggttcctttcgtttcgtgcacccccctcacacgga 25820945  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtatt 297  Q
    ||  || |||||| |||||| |||||||||||| | |||| ||||||||| |||||    
T  25820946 aggtgtttgtcgcgagtaattttgccaaacgtggtgtttgggctttggatggtatt 25821001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 42 - 200
Target Start/End: Complemental strand, 10532959 - 10532801
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||||||| |    |||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||||||||||    
T  10532959 ttctaccttggggactccattaagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctgactctggcggttacgaaatcgtgg 10532860  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtt 200  Q
     | |||||||||| || | | |||||||||||||||| || |||||||||| |||||||    
T  10532859 aaagtgtaaccgccagggtgtttattgcaggaacgtggagagagacgttgtggttcgtt 10532801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 311
Target Start/End: Complemental strand, 10532789 - 10532641
Alignment:
Q  163 ttattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaata 262  Q
    |||||||||||||||| || |||||||||| ||||||||||||| ||||   ||||| |||| |||||||||||| | ||| |||||| ||||||||       
T  10532789 ttattgcaggaacgtggagagagacgttgtggttcgtttgaaccaatctctttcgcttcgtgtaccccccttgcatgtaaggggtgtgccgcaagtatct 10532690  T
Q  263 ttgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||||   |||| |||||| || |||||| ||||||||||||    
T  10532689 ttgccaaacgtggcgtttgagctttgaatggtattgggcctaagtaaat 10532641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 17775783 - 17775918
Alignment:
Q  175 cgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtg 274  Q
    ||||||| |||||||||| ||||| |||||||  |||   ||||||||| ||||||| |||   ||||| ||||||||||||||||  ||||||||||||    
T  17775783 cgtgcagagagacgttgtggttcgattgaaccagtctctttcgctccgtacaccccc-ttgtgtggaaggggtgtgtcgcaagtaactttgccaaacgtg 17775881  T
Q  275 ctatttgtgctttggattgtattgagcctaagtaaat 311  Q
     | |||| ||||||||||||||||  |||| ||||||    
T  17775882 atgtttgggctttggattgtattggacctaggtaaat 17775918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 17429260 - 17429201
Alignment:
Q  46 accttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgta 105  Q
    |||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  17429260 accttggggactgctaagagtcccctttatatagaggtggatgtttgcagaaccgttgta 17429201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 7454624 - 7454551
Alignment:
Q  240 gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaatag 313  Q
    |||| ||||||| ||||||||  ||||||||||||   |||| |||||||||||| ||| ||||||||||||||    
T  7454624 gaaggggtgtgttgcaagtaagtttgccaaacgtggagtttgggctttggattgtgttgggcctaagtaaatag 7454551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 9251518 - 9251588
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcac 112  Q
    ||||| ||| |||||||| | ||||||||| |||||||||||||  |  |||||| |||||||||||||||    
T  9251518 ttctatctttgggactgcgaggagtcccctttatatagaggtgggtgaatgcagagccgttgtaatggcac 9251588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 1788680 - 1788732
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgca 94  Q
    ||||||||||| ||||||   ||||| ||||| ||||||||||||||||||||    
T  1788680 ttctaccttggtgactgcattgagtctcctatttatagaggtggagggctgca 1788732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 7e-80; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 13 - 311
Target Start/End: Complemental strand, 18014656 - 18014358
Alignment:
Q  13 gagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcac 112  Q
    |||||||| |||||||||| |||||| | |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  18014656 gagagtgagggttaagaggaagagattgattctaccttggggactgctatgagtcccctacatatagaggtggagggctgcagagccgttgtaatggcac 18014557  T
Q  113 acctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatcta 212  Q
    |||| |||||| | ||||||||||||||||| || ||||| | |||||||||||||| ||||||| |||  | || |||| |||||||||||| | |||     
T  18014556 acctagctctggcggttacgaaatcgtgggaagtctaaccaccagagagattattgcgggaacgtacagtcaaacattgtggttcgtttgaactggtctt 18014457  T
Q  213 gctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||||||||||||| || |||||| ||| |||||||||||||||||||| | ||  | | ||  || |||||||||||||||||||||||||    
T  18014456 gctcgctccgtgcacccccctcgcggggaaggggtttgtcgcaagtaatattgccacatgtagtgtctggtctgtggattgtattgagcctaagtaaat 18014358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 14910636 - 14910904
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||||||||||||| | |||||| | |||||||||| ||||    
T  14910636 ttctaccttggggactgcagtgagtcccctatatatagaggtggagggctgcaaagccgttgtaatggcacacatcgctctggcagttacgaaattgtgg 14910735  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || |||||||||| | |||| ||||||| ||||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||| ||   ||||    
T  14910736 gaagtgtaaccgccatagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccggtcttgctcgctccgtgcacccccatt-tgggga 14910834  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || |||||||||||| |||| |||||||| ||| | ||||  ||||||||| ||||| ||||||||||||    
T  14910835 aggggtgtgtcgcaaataatgttgccaaatgtggtgtttggactttggattctattgtgcctaagtaaat 14910904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 18736030 - 18736299
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||| | |||||||||| ||||    
T  18736030 ttctagcttggggactgctatgagtcccctatttatagaggtggagggctgctgagccgttgtaatggcacacctggctctggcggttacgaaattgtgg 18736129  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || || ||| ||| |||||| ||||||| |||||||| || |||||||||| | ||||||||||| |||| |||||||||||||||||| ||||| || |    
T  18736130 gaagtctaatcgccagagagtttattgcgggaacgtgtagagagacgttgtggctcgtttgaaccaatctcgctcgctccgtgcacccctcttgcgggaa 18736229  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || ||| | | ||||||||  |||||||||||| | |||| |||||||||  ||||| ||||||||||||    
T  18736230 aggggtatattgcaagtaagtttgccaaacgtggtgtttgggctttggatattattgggcctaagtaaat 18736299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 274
Target Start/End: Original strand, 12738494 - 12738757
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||  |||| ||||| |||||| | |||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  12738494 cagagagtgggggtttagaggaagagatagattctacctaggggactgctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatggc 12738593  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||| |||||| ||||  |||||||||||||||| |||||||| |||||||| ||||||| ||||||||||| |||||||||| ||||||||||||   ||    
T  12738594 acatctggctatgacgattacgaaatcgtgggaagtgtaacctctagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaactagtc 12738693  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtg 274  Q
    | | ||||||||| |||||||||||  || ||| ||||||||||| ||||  ||||||||||||    
T  12738694 ttgttcgctccgtacaccccccttgtgggaaaggggtgtgtcgcaggtaactttgccaaacgtg 12738757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 23574393 - 23574692
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||| | |||||||||| ||||||||  ||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  23574393 cagagagtgagggtttagaggaagagatagattctaccttgtggactgctttgagtcccctatttatagaggtagagggctgcagagccgttgtaatggc 23574492  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    |||| |||||||| |||||||||| |||||| | |||||||| | |||||| |||||||  |||| || || |||||||||| |||||||||||||  ||    
T  23574493 acacttggctctggctgttacgaagtcgtggaaagtgtaaccaccagagagtttattgcgagaacatgtagagagacgttgtggttcgtttgaaccagtc 23574592  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | | |||||||||||| | ||||||  || ||| ||||| || |||||||  ||| |||||||| | |||| |||||||||||||||| |||||||||||    
T  23574593 tcgttcgctccgtgca-cgcccttgtgggaaaggggtgtatcacaagtaactttgtcaaacgtggtgtttgggctttggattgtattgggcctaagtaaa 23574691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 42 - 310
Target Start/End: Complemental strand, 15349798 - 15349529
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| |||| | |||||||||||||||    
T  15349798 ttctacgttggggactgctaagagtcccctatatatagaggtggagggctgcagagccgttgtgatagcacacctgggtctggcggttacgaaatcgtgg 15349699  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcg-tttgaaccgatctagctcgctccgtgcaccccccttgc-agg 239  Q
    || |||||||||| |||||||||||||  ||||||||||  |||| ||||| ||||| ||||||||| ||| ||  |||| ||||||||||   || | |    
T  15349698 gaagtgtaaccgcgagagagattattgtgggaacgtgcaaagagatgttgtggttcgttttgaaccggtcttgcatgctctgtgcaccccctccgcgatg 15349599  T
Q  240 gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    |||| ||||||| ||||||||||||||||||| || | ||||  ||||||||||||| | |||||||||||    
T  15349598 gaag-ggtgtgttgcaagtaatattgccaaacatggtgtttgatctttggattgtatcgggcctaagtaaa 15349529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 42 - 307
Target Start/End: Complemental strand, 29095187 - 29094921
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   ||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||    
T  29095187 ttctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgg 29095088  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcacc-ccccttgcaggg 240  Q
    || ||||||||||  | ||| ||||||| |||||||| |  |||||||||  |||||||||||||| |||   ||| |||||||||| ||||| ||  ||    
T  29095087 gaagtgtaaccgcctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccggtctctttcgttccgtgcaccccccctcgcgtgg 29094988  T
Q  241 aagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagt 307  Q
    ||| |||||||||| |||||| |||||||||||| | |||| ||||||||| |||||| ||||||||    
T  29094987 aaggggtgtgtcgcgagtaattttgccaaacgtggtgtttgggctttggatggtattgggcctaagt 29094921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 42 - 313
Target Start/End: Complemental strand, 15319148 - 15318877
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| |||| |||||| | |||| | |||||||||||||||    
T  15319148 ttctaccttggggactgctaagagttccctatatatagaggtggagggctgcagagtcgttgtgatggtacacctaggtctggcggttacgaaatcgtgg 15319049  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcg-tttgaaccgatctagctcgctccgtgcaccccccttgc-agg 239  Q
    || ||||||||||||||||||||||||||||||||||||  |||| ||||| ||||| ||||||| | ||| ||  |||||||  |||||  | || | |    
T  15319048 gaagtgtaaccgctagagagattattgcaggaacgtgcaaagagaagttgtggttcgttttgaactggtcttgcatgctccgtaaacccctttcgcaatg 15318949  T
Q  240 gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaatag 313  Q
    |||| |||||||||||||||||||||| ||||||| | |||| | |||||||||||||| || ||||| |||||    
T  15318948 gaag-ggtgtgtcgcaagtaatattgcaaaacgtggtgtttgag-tttggattgtattgggcttaagtcaatag 15318877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 311
Target Start/End: Original strand, 18728923 - 18729220
Alignment:
Q  14 agagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcaca 113  Q
    ||||||| || | ||||| |||||| | |||||||||| |||||| || ||||||||||| ||||||||||||||||||||||  | ||||||||| |||    
T  18728923 agagtgagggattagaggaagagatagattctaccttgaggactgttatgagtcccctatttatagaggtggagggctgcagagacattgtaatggaaca 18729022  T
Q  114 cctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctag 213  Q
    |||||||||| | | ||| ||||||||||| |||||||||| | |||| ||||||| | ||||||||| |||||||||| | || ||||||||| ||| |    
T  18729023 cctggctctggcgggtacaaaatcgtgggaagtgtaaccgccatagagtttattgcggaaacgtgcagagagacgttgtggctcctttgaaccggtctcg 18729122  T
Q  214 ctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
     ||||||||||||||| |||||| || ||| |||||||  |||||||  ||| |||||||| | |||| | ||||||| |||||  ||||||||||||    
T  18729123 ttcgctccgtgcaccctccttgcgggaaagcggtgtgttacaagtaagtttgtcaaacgtggtgtttgggttttggatagtattaggcctaagtaaat 18729220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 29482590 - 29482890
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||  |||| ||||| |||||| | |||||||||||||||| ||| ||||||||||| |||||||||||||||||| |||  ||||||||||||    
T  29482590 cagagagtgggggtttagaggaagagatagattctaccttggggactactatgagtcccctatttatagaggtggagggctgtagagtcgttgtaatggc 29482689  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    |||||||| |||  | ||||||||||||||||| || |||| |  |||||| ||||||| ||||| ||||| |||||||||| | |||||||||||| ||    
T  29482690 acacctggttctagcggttacgaaatcgtgggaagtataactgtgagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtc 29482789  T
Q  211 tagctcgctccgtgcaccccccttgcagg-gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaa 309  Q
    | ||||||||||||||  | | |||  ||  ||| ||||||||||||||||| ||||||||||||   |||| |||||||||||| ||| |||| |||||    
T  29482790 tcgctcgctccgtgca-gcactttgtgggaaaaggggtgtgtcgcaagtaatgttgccaaacgtggcgtttgggctttggattgtgttgggcctgagtaa 29482888  T
Q  310 at 311  Q
    ||    
T  29482889 at 29482890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 15119918 - 15119621
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||  |||| ||| | |||||| | |||||||||||||| || |  ||||||||||| ||||||||||||| | |||||| ||  ||||||||||    
T  15119918 agagagtgggggtttagatgaagagatagattctaccttggggattgtt--gagtcccctatttatagaggtggagagttgcagagccagtgtaatggca 15119821  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||| | ||||| ||||||||||| || |||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||||  |||    
T  15119820 cacctggctctggcggttacaaaatcgtgggaagtataaccgctagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaacctgtct 15119721  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
       || ||| ||||||||||||||   ||||| ||||||||  ||||||  ||| |||||||| | |||| ||| |||||||||||| ||||||||||||    
T  15119720 ctttcactctgtgcaccccccttgtgtggaaggggtgtgtcataagtaactttgtcaaacgtggtgtttgggctctggattgtattgggcctaagtaaat 15119621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 4409196 - 4409496
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | ||||||||||||||||||   || ||| |||| |||||||||||||||||||| | |||||  |||||||    
T  4409196 agagagtgagggtttagaggaagagatagattctaccttggggactgcattgaatcctctatttatagaggtggagggctgcaaagccgttacaatggca 4409295  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    ||||| |||||| | ||||| |||||||| || ||||||||||||| | | ||||||| ||||||||||  |||||||||| |||||||||||||  |||    
T  4409296 caccttgctctggcggttacaaaatcgtgagaagtgtaaccgctagggcgtttattgcgggaacgtgcatagagacgttgtggttcgtttgaaccagtct 4409395  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgct-atttgtgctttggattgtattgagcctaagtaaa 310  Q
       ||||||||||||||||||||||  | ||| |||||||| |||||||  ||| |||||||| |  |||| |||||| ||  ||||| |||||||||||    
T  4409396 ctttcgctccgtgcaccccccttgcgtgaaaggggtgtgtcacaagtaactttgtcaaacgtggtgttttgggctttgaatgatattgggcctaagtaaa 4409495  T
Q  311 t 311  Q
    |    
T  4409496 t 4409496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 18258764 - 18258495
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||| ||||| |  ||||||||||| ||||||||| |||||||| ||| |||||||| ||||||||||||||||||  |||||||||| ||||    
T  18258764 ttctaccttggagactgttgtgagtcccctatttatagaggtagagggctgtagagccgttgtagtggcacacctggctctgatggttacgaaattgtgg 18258665  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || ||||||| |||| |||| ||||||| |||| |||| | |||||||||| |||| ||||||||| |||  |||||| ||||||||||| |||  | ||    
T  18258664 gaagtgtaactgctaaagagtttattgcgggaatgtgcggagagacgttgtggttcctttgaaccggtctcactcgcttcgtgcaccccctttgtggaga 18258565  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |  ||| ||  ||||||||  |||| |||| || | |||| |||||||||||||||| ||||||||||||    
T  18258564 aagggtatgctgcaagtaagtttgcaaaacatggtgtttgggctttggattgtattgggcctaagtaaat 18258495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 307
Target Start/End: Complemental strand, 24438760 - 24438465
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | || ||||||||| ||||||  ||||||||||| ||||||||| ||||  ||||||  |||||||||| ||    
T  24438760 agagagtgagggtttagaggaagagatagattataccttggg-actgctgtgagtcccctatttatagaggtagaggattgcagagtcgttgtaatgaca 24438662  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||  | ||||||||||||||||| |||||||||| | |||| | ||||||||||||||||  |||||| ||| ||||||||||||| ||||    
T  24438661 cacctggctcttgcggttacgaaatcgtgggaagtgtaaccgccatagagttgattgcaggaacgtgcaaagagacgatgtggttcgtttgaaccaatct 24438562  T
Q  212 agctcgctccgtgcac-cccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagt 307  Q
       || | |||||||| |||||||||  ||||| ||||||| |||||||| || |||||| ||| | ||||  ||||||||||||||| ||| ||||    
T  24438561 ctttctccccgtgcacacccccttgcgtggaaggggtgtgttgcaagtaacatagccaaatgtggtgtttgaactttggattgtattgggccaaagt 24438465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 7968694 - 7968500
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||||||||| | |||| | |||| |||||||||||||   |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  7968694 agagagtgagggttaagaggaaaagatagattctgccttggggactgcattgagtcccctatatatagaggtggagggctgcagagctgttgtaatggca 7968595  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaacc 206  Q
    |||||| ||||| | |||||||||| |||| | |||||||||| || | | ||||||  ||||||||||| |||||||||| |||||||||||||    
T  7968594 cacctgactctggcggttacgaaattgtggaaagtgtaaccgccagggggtttattgtgggaacgtgcagagagacgttgtggttcgtttgaacc 7968500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 15369794 - 15369524
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  |||| | |||| |||||| | |||| | |||||||||| || |    
T  15369794 ttctaccttggggactgctaagagtcctctatatatagaggtggagggctgtagagtcgttatgatggtacacctaggtctggcggttacgaaattgtag 15369695  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcg-tttgaaccgatctagctcgctccgtgcaccccccttgc-agg 239  Q
    || |||||||||| ||| |||||||||| ||||||||||  |||| ||||| ||||| ||||||||| ||| |   ||||| |||||| || | || | |    
T  15369694 gaagtgtaaccgccagacagattattgcgggaacgtgcaaagagaagttgtggttcgttttgaaccggtcttgtatgctccttgcaccgccttcgcgaag 15369595  T
Q  240 gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||| ||||||| ||||| |||||||||||||||| | |||| |||||||||| ||||| || |||||||||    
T  15369594 gaag-ggtgtgttgcaaggaatattgccaaacgtggtgtttgagctttggattatattgggcttaagtaaat 15369524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 19860252 - 19860057
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| | ||||   |||||||||||||||||||  ||||||||||| ||||||||||||||||||| || ||||||||||||     
T  19860252 cagagagtgacggtttagaggaatagataaattctaccttggggactgctgtgagtcccctatttatagaggtggagggctgcggagccgttgtaatggg 19860153  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaacc 206  Q
    ||||||||||||| | ||||||||||||||||| |||||||| | |||||||||||||  ||||| ||  | |||||||||  |||||||||||||    
T  19860152 acacctggctctggcggttacgaaatcgtgggaagtgtaaccaccagagagattattgtgggaacatgttgagagacgttgcggttcgtttgaacc 19860057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 134 - 311
Target Start/End: Complemental strand, 21508716 - 21508539
Alignment:
Q  134 aatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcacccccct 233  Q
    |||||||||| |||||||||| | |||| ||||||||||||||||||| |||||| ||| ||||| |||||||  |||   |||||||||||||||||||    
T  21508716 aatcgtgggaagtgtaaccgccatagagtttattgcaggaacgtgcagagagacgctgtggttcgattgaaccagtctctttcgctccgtgcacccccct 21508617  T
Q  234 tgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||| ||||| ||||||| ||||||||  ||| |||||||| | |||| |||||||||||||||| ||||||||||||    
T  21508616 tgcatggaaggggtgtgttgcaagtaactttgtcaaacgtggtgtttgagctttggattgtattgggcctaagtaaat 21508539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 311
Target Start/End: Complemental strand, 17757140 - 17756918
Alignment:
Q  89 gctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacg 188  Q
    ||||| || |||||||||||||||||||  ||||||| ||||| ||||||||||| ||||||||||  | ||| ||||||  |||||||| |  ||||||    
T  17757140 gctgccgagccgttgtaatggcacaccttactctgacggttacaaaatcgtgggaagtgtaaccgcctgtgagtttattgtgggaacgtggaaagagacg 17757041  T
Q  189 ttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttg 288  Q
    |||  ||||||||||||| ||||   ||| ||||||||||||||| ||  ||||| |||||||||| |||||| |||||||||||| | |||| |||||     
T  17757040 ttggggttcgtttgaaccaatctttttcgttccgtgcacccccctcgcgtggaaggggtgtgtcgcgagtaattttgccaaacgtggtgtttgggctttc 17756941  T
Q  289 gattgtattgagcctaagtaaat 311  Q
    |||||||||  ||||||||||||    
T  17756940 gattgtattaggcctaagtaaat 17756918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 311
Target Start/End: Original strand, 3876374 - 3876617
Alignment:
Q  68 ccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattatt 167  Q
    ||||||||||||||||||||||||||||| ||||||| | | |||||||   |||| | ||||||||||||| ||| |||||| ||  ||||||||||||    
T  3876374 ccctatatatagaggtggagggctgcagagccgttgtgaagacacacctaagtctggcggttacgaaatcgtaggaagtgtaatcgtcagagagattatt 3876473  T
Q  168 gcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgcc 267  Q
    || ||||  ||||  |||||||||||| || ||||||||||||| ||| ||||||||||||||| | || | |||| ||| |||| |||||||  |||||    
T  3876474 gcgggaatatgcaaagagacgttgtagctcatttgaaccgatcttgcttgctccgtgcacccccttcgcggagaaggggtatgtcacaagtaagtttgcc 3876573  T
Q  268 aaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||||||   |||| |||| ||| ||| ||| |||||| |||||    
T  3876574 aaacgtgaagtttgggcttgggactgtgttgggcctaaataaat 3876617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 206
Target Start/End: Original strand, 8306064 - 8306254
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| ||||||    ||||||||||||||||||  ||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  8306064 agagagtgagggtttagaggaagagat----tctaccttggggactgctgtgagtcccctatttatagaggtggagggttgcagagccgttgtaatggca 8306159  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaacc 206  Q
    |||||| ||||  | |||| |||||| ||| | |||||||||| |||||| ||||||| ||||| | ||| ||||||||||   |||||||||||    
T  8306160 cacctgactctagcagttatgaaatcatggaaagtgtaaccgccagagagtttattgcgggaacctacagagagacgttgtgactcgtttgaacc 8306254  T

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Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 23524128 - 23524244
Alignment:
Q  76 atagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaac 175  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||| | |||| |||||||||| | ||||||||   | |||| ||||||| |||||    
T  23524128 atagacgtggagggctgcagagccattgtaatggcacacctggctctggcggttaagaaatcgtggaaagtgtaaccatcaaagagtttattgcgggaac 23524227  T
Q  176 gtgcagcgagacgttgt 192  Q
    |||||| |||| |||||    
T  23524228 gtgcagagagaagttgt 23524244  T

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Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 18043340 - 18043471
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| ||||||   ||||||||||||||||||    |||||||||| |||||||||||||||||||| | ||||||||||| ||    
T  18043340 agagagtgagggtttagaggaagagataaattctaccttggggactgcatttagtcccctatttatagaggtggagggctgcaaagccgttgtaatgaca 18043439  T
Q  112 cacctggctctgactgttacgaaatcgtggga 143  Q
    | | || ||||| | | ||||||||| |||||    
T  18043440 cgcatgactctggcgggtacgaaatcatggga 18043471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 14479994 - 14480123
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||| ||| |||| ||||||| |||| | |||||||| |||||||| |||||||||||||||||||  |||||  ||||||||| || ||||||||||    
T  14479994 cagagaatgagggtttagaggga-agatagattctacctaggggactgttaagagtcccctatatataccggtgggtggctgcagagccattgtaatggc 14480092  T
Q  111 acacctggctctgactgttacgaaatcgtgg 141  Q
    |||| ||  || | | |||||||||||||||    
T  14480093 acacgtgtgtccggcagttacgaaatcgtgg 14480123  T

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Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 6109587 - 6109473
Alignment:
Q  40 ggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgtt---gtaatggcacacctggctctgactgttacgaaat 136  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||  |  ||||||||||||   ||||| |||||| ||  |||| | ||||||||||    
T  6109587 ggttctaccttggggactgcgaggagtcccctttatatagaggtgggtgaatgcagaaccgttgcagtaatagcacacatgtgtctggcggttacgaaat 6109488  T
Q  137 cgtgggatgtgtaac 151  Q
    ||||| | |||||||    
T  6109487 cgtggaaagtgtaac 6109473  T

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Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 19885778 - 19885837
Alignment:
Q  47 ccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaa 106  Q
    ||||||||||||| ||||||||||| |||||||||| ||| ||||||||| |||||||||    
T  19885778 ccttggggactgcaaagagtcccctttatatagaggcggatggctgcagagccgttgtaa 19885837  T

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Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 311
Target Start/End: Complemental strand, 19857797 - 19857735
Alignment:
Q  249 tgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||||||| |||  |||||||||||| | |||| |||||||||||||||||||||||||||||    
T  19857797 tgtcgcaactaactttgccaaacgtggtgtttgagctttggattgtattgagcctaagtaaat 19857735  T

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Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 18043493 - 18043577
Alignment:
Q  227 ccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||  | ||| ||||| ||||||||||  |||||||||||| | |||| |||||| || |||||| ||||||||||||    
T  18043493 ccccccttgcgtgaaaggggtgtatcgcaagtaactttgccaaacgtgatgtttgggctttgaatggtattgggcctaagtaaat 18043577  T

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Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 27964951 - 27965023
Alignment:
Q  239 ggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||||||||| ||||| |||||| || ||||||||| | |||| |||||||||  ||||| ||||||||||||    
T  27964951 ggaagaggtgcgtcgcgagtaattttaccaaacgtggtgtttgggctttggatgatattgggcctaagtaaat 27965023  T

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Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 14976712 - 14976746
Alignment:
Q  50 tggggactgctaagagtcccctatatatagaggtg 84  Q
    |||||||||||||||||||||| ||||||||||||    
T  14976712 tggggactgctaagagtcccctttatatagaggtg 14976746  T

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Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 23524253 - 23524319
Alignment:
Q  245 ggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||||||||  |||| ||||||| | |||| ||||||| ||||||||  |||||||||||    
T  23524253 ggtgtgtcgcaagtaactttgcaaaacgtggtgtttgggctttgggttgtattgtacctaagtaaat 23524319  T

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Target: scaffold0002 (Bit Score: 146; Significance: 6e-77; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 391458 - 391759
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||| | |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  391458 cagagagtgagggtttagaggaagagatagattctaccttggggactgctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatggc 391557  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||||||||| | ||||||||||  ||||| |||||||||| |||||| ||||||| ||||| ||||| |||||||||| ||||||||||||   ||    
T  391558 acacctggctctggcggttacgaaattatgggaagtgtaaccgccagagagtttattgcgggaacctgcagagagacgttgtggttcgtttgaactagtc 391657  T
Q  211 tagctcgctccgtgca-ccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaa 309  Q
    | |||||||||||||| |||||||||| || ||| ||||||| ||||||||  ||||||| |||| | |||| | ||||||||||||||  |||||||||    
T  391658 tcgctcgctccgtgcacccccccttgcgggaaaggggtgtgttgcaagtaagtttgccaaccgtggtgtttggggtttggattgtattggacctaagtaa 391757  T
Q  310 at 311  Q
    ||    
T  391758 at 391759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 13 - 311
Target Start/End: Original strand, 380763 - 381060
Alignment:
Q  13 gagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcac 112  Q
    |||||||| |||| ||||| |||||| | || |||| |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  380763 gagagtgagggtttagaggaagagatagatt-taccatggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcac 380861  T
Q  113 acctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatcta 212  Q
    |||||||||||   |||||||||| ||| || |||||||||| |||||  ||||||| |||||||| || |||||||||| |||||||||||||  |||     
T  380862 acctggctctggaggttacgaaattgtgagaagtgtaaccgccagagactttattgcgggaacgtgtagagagacgttgtggttcgtttgaaccagtctc 380961  T
Q  213 gctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||||||||||||||||||| ||| ||||||  ||||||||  ||||||| | || | |||| |||||||||||||||| || |||||||||    
T  380962 gctcgctccgtgcaccccccttgcaggaaaggggtgtggtgcaagtaagtttgccaaccatggtgtttgggctttggattgtattgggcgtaagtaaat 381060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 311
Target Start/End: Complemental strand, 37426 - 37127
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| ||||||||||||||||| | ||||| |||| ||||||| | |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  37426 cagagagtgagggttaagagggagagattgattctatcttgcggactgccacgagtcccctatatatagaggtggagggctgcagagccgttgtgatggc 37327  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    || || ||||||| | |||| |||||||||||| |||||||||| |||||||||||||||||||| ||||| |||||||||  ||| ||||||| || ||    
T  37326 acgccaggctctggcggttatgaaatcgtgggaagtgtaaccgc-agagagattattgcaggaacatgcagagagacgttgcggtttgtttgaatcggtc 37228  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | ||| |||| |||||||||  | || | |||| |||||||||||||||| | ||||||||||| |||||  | ||||||||||||||||||||||||||    
T  37227 ttgcttgctctgtgcacccctgtcgcggagaaggggtgtgtcgcaagtaacactgccaaacgtggtattttagatttggattgtattgagcctaagtaaa 37128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 42 - 298
Target Start/End: Complemental strand, 42534292 - 42534036
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||||||||    
T  42534292 ttctaccttggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacatctggctctggcggttacgaaatcgtgg 42534193  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || |||||||||| |||||| ||||||| ||||||||||| |||||||||| | |||||||||| | ||| ||||||| |||||||||||||||  || |    
T  42534192 gaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggctcgtttgaacaggtctcgctcgctacgtgcaccccccttgtgggaa 42534093  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattg 298  Q
    || || |||||||||||||  ||| |||||||| | |||| ||||||||||||||||    
T  42534092 aggggagtgtcgcaagtaaggttgacaaacgtggtgtttgggctttggattgtattg 42534036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 3770260 - 3770559
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| | ||| |||||| | ||||||||||||||||| |  || |||||||| |||||||||||||||||||||| ||||||||||||||    
T  3770260 agagagtgagggtttaaaggaagagatagattctaccttggggactgttgtgaatcccctatttatagaggtggagggctgcagagccgttgtaatggca 3770359  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||| | ||||| ||||||||| | ||||||||||||||||| ||||||| | ||||||||| |||||||||  |||||||||||||  |||    
T  3770360 cacctggctctggcggttacaaaatcgtggaaagtgtaaccgctagagagtttattgcggaaacgtgcagagagacgttgaggttcgtttgaaccagtct 3770459  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
      |||||||| |||||||||||||   ||||| ||||||| ||||||||  |||||||||||| | |||| |||||| ||||||||| ||||||||||||    
T  3770460 ctctcgctccatgcaccccccttgagtggaaggggtgtgttgcaagtaactttgccaaacgtggtgtttgggctttgaattgtattgggcctaagtaaat 3770559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 25134133 - 25133825
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||| |||||||| ||||| |||||| | ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  25134133 agagaatgatggtttagaggaagagatagattctaccttagggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtagtggca 25134034  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||| | ||||||||||||||| | |||||||||| |||||| ||||||| ||||||||||  |||||||||| |||||||||||||  |||    
T  25134033 cacctggctctggcggttacgaaatcgtggtaagtgtaaccgccagagagtttattgcgggaacgtgcaaagagacgttgtggttcgtttgaaccagtct 25133934  T
Q  212 agctcgctccgtgcacc---------ccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcc 302  Q
     ||| ||||||||||||         ||||||  ||| ||| ||||||||||||||||  |||||||||||| | |||| ||||||||||||| || |||    
T  25133933 cgcttgctccgtgcaccccccaccccccccttttaggaaaggggtgtgtcgcaagtaactttgccaaacgtggtgtttgggctttggattgtaatgggcc 25133834  T
Q  303 taagtaaat 311  Q
    |||||||||    
T  25133833 taagtaaat 25133825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 23756018 - 23755719
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | ||||||||||||||||| |  ||||||||||| |||||||||||| ||||| ||| ||||||||||||||    
T  23756018 agagagtgagggtttagaggaagagatagattctaccttggggactgttgtgagtcccctatttatagaggtggaaggctgtagagccgttgtaatggca 23755919  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||  | ||||||||||||||||| |||||||||| | |||| ||||||| ||||||||||| |||||||||| |||| ||||||||  ||     
T  23755918 cacctggctctagcggttacgaaatcgtgggaagtgtaaccgccatagagtttattgcgggaacgtgcagagagacgttgtggttcttttgaaccagtca 23755819  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
       ||||||||||||||||||||||  ||||| ||||||| ||||||||  || |||||| || | |||| |||||||||||||||| ||||| ||||||    
T  23755818 ctttcgctccgtgcaccccccttgcttggaaggggtgtgttgcaagtaactttaccaaacatggtgtttgggctttggattgtattgggcctaggtaaat 23755719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 3105203 - 3105503
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| | || ||||| |||| | | |||||||||||||||||||| ||||||| ||| ||||||||||||||  || ||| ||||||||||| |    
T  3105203 cagagagtgaggttttagaggaagagttagattctaccttggggactgctatgagtcccatatttatagaggtggaggattgtagagccgttgtaatgac 3105302  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||  |||| |  |||| |||||||||||| |||||||||| |||||| ||||||| ||||||||||| |||||||||| | |||||||||||| ||    
T  3105303 acacctaactctcatggttatgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggctcgtttgaaccggtc 3105402  T
Q  211 tagctcgctccgtgcaccccccttgcagggaa-gaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaa 309  Q
    | |||||||| ||||| | ||||||  || || | ||||||||||||||||| ||| |||||||| | |||| |||||||||||| ||| ||||||||||    
T  3105403 tcgctcgctctgtgca-ctcccttgtgggaaagggggtgtgtcgcaagtaatgttgtcaaacgtggtgtttgggctttggattgtgttgggcctaagtaa 3105501  T
Q  310 at 311  Q
    ||    
T  3105502 at 3105503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 23929796 - 23930014
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||| | | || |||||||||||||||   |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  23929796 cagagagtgagggtttagaggaagagttagattttaccttggggactgcagtgagtcccctatataaagaggtggagggctgcagagccgttgtaatggc 23929895  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||||||||| | |||||| |||||||||| ||||||||||  ||||| ||||||  ||||||||||| ||||| |||| |||| ||||||||| ||    
T  23929896 acacctggctctggcggttacggaatcgtgggaagtgtaaccgccggagagtttattgtgggaacgtgcagagagacattgtggttcatttgaaccggtc 23929995  T
Q  211 tagctcgctccgtgcaccc 229  Q
    | |||||||||||||||||    
T  23929996 tcgctcgctccgtgcaccc 23930014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 44 - 311
Target Start/End: Original strand, 19092753 - 19093019
Alignment:
Q  44 ctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtggga 143  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||| | ||||  | ||| |||| | ||||||    
T  19092753 ctaccttggggactgctatgagtcccctatatatagaggtggggggctgcagagccgttgtaatgacacaccagactctcgcggtttcgaacttgtggga 19092852  T
Q  144 tgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaag 243  Q
     |||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||||||   ||| | ||||||||||||||||| | |  | ||||    
T  19092853 agtgtaaccgccagagagattattgcgggaacgtgcagagagacgttgtggttcgtttgaactagtcttgttcgctccgtgcaccccc-tcgtggagaag 19092951  T
Q  244 aggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
     | ||||||||||||||| || |||||| || | |||| |||||| ||  ||||| ||||||||||||    
T  19092952 ggatgtgtcgcaagtaatgttaccaaacatggtgtttgggctttgaataatattgggcctaagtaaat 19093019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 27 - 206
Target Start/End: Complemental strand, 41266380 - 41266201
Alignment:
Q  27 agagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgact 126  Q
    ||||| |||||| | |||||||||||||||||||  ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |     
T  41266380 agaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggctctggcg 41266281  T
Q  127 gttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaacc 206  Q
    ||||||| |||||| || ||||||||||  ||||| ||||||| ||||||||||| |||||||||| |||||||||||||    
T  41266280 gttacgatatcgtgagaagtgtaaccgcccgagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaacc 41266201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 46 - 311
Target Start/End: Complemental strand, 26155148 - 26154883
Alignment:
Q  46 accttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatg 145  Q
    |||| |||||||| |  ||||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||| ||   ||||||||||||||||| |    
T  26155148 acctcggggactgattggagtcccctatttatagaggtggagggctgcatagccgttataatggcacacctggctatggtggttacgaaatcgtgggaag 26155049  T
Q  146 tgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagag 245  Q
    ||||||||| |||| | ||||||| ||||||| ||  |||| ||||| ||||||||||||  ||||   |||||||||||||||||||||   ||||| |    
T  26155048 tgtaaccgccagagcgtttattgcgggaacgtacaaagagatgttgtggttcgtttgaactaatctctttcgctccgtgcaccccccttgtgtggaaggg 26154949  T
Q  246 gtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
     ||||||||||||||  |||||||||||| | ||||  ||||  ||| |||||  |||||||||||    
T  26154948 atgtgtcgcaagtaactttgccaaacgtggtgtttgaactttaaattatattggacctaagtaaat 26154883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 205
Target Start/End: Original strand, 29568315 - 29568507
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| ||| || | ||||| ||||| |  ||||| |||||||| || ||||||||||||||||| |||| |||||||||||| |    
T  29568315 agagagtgagggtttagaggaagacatagattctaacttggcggttgctatgagtccccaatttatagaggtggagggctacagagccgttgtaatggta 29568414  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaac 205  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| || |||||||||| | ||||||||||    
T  29568415 cacctggctctggcggttacgaaatcgtgggaagtgtaaccgctagagagtttattgc-ggaacgtgtagagagacgttgtggctcgtttgaac 29568507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 27347170 - 27347467
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||||||||  |||| |||||  | ||||||||||||||||||   || |||||||| |||||| |||||||||| || | |||||||||||||    
T  27347170 cagagagtgatggttttgaggaagaga--gattctaccttggggactgcattgaatcccctatgtatagacgtggagggctacaaagccgttgtaatggc 27347267  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||  | ||||| ||||||||||| ||||| ||||||| ||    ||| ||||||| |||||||| |  |||||||||  |||||||||||||  ||    
T  27347268 acacctaacactgacggttacgaaatcatgggaagtgtaactgcctatgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtc 27347367  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    |   ||| |  ||||| ||||||  || ||||| |||||||||| |||||| |||||||||||| | |||| ||||||||| |||||| || ||||||||    
T  27347368 tctttcgttatgtgca-ccccctctcatggaaggggtgtgtcgcgagtaattttgccaaacgtgatgtttgggctttggatggtattgggcttaagtaaa 27347466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 311
Target Start/End: Complemental strand, 22452970 - 22452721
Alignment:
Q  61 aagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgt---gtaaccgctag 157  Q
    |||||||||||| ||||||||||||  ||||||||| || |||||||||||||| ||  ||||   |||||||||| |||||  ||   |||||||| ||    
T  22452970 aagagtcccctaaatatagaggtgggtggctgcagagccattgtaatggcacacgtgtgtctggtggttacgaaatagtggggagtatagtaaccgccag 22452871  T
Q  158 agagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaag 257  Q
    |||||||   |  ||||| | |   ||||||||| ||||| ||||||| | ||| ||| ||||||||||| ||||| || |||||| ||||||| || ||    
T  22452870 agagattcacg--ggaacatacgaagagacgttgcagttcatttgaactggtctcgcttgctccgtgcactcccctcgcggggaag-ggtgtgttgcgag 22452774  T
Q  258 taatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||| ||| |||||||| |||||| | |||||||| ||||||||||||| ||||    
T  22452773 taatgttgtcaaacgtggtatttg-ggtttggattatattgagcctaagcaaat 22452721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 26159233 - 26159154
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggct 91  Q
    ||||||||| |||| ||||| |||||| | |||||||||||| ||||||  ||||||||||| |||||||||||||||||    
T  26159233 agagagtgagggtttagaggaagagatagattctaccttgggaactgctttgagtcccctatttatagaggtggagggct 26159154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 23932905 - 23932978
Alignment:
Q  238 gggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||||| ||||||||||||||||| ||| || ||||| | |||| |||||||||||||||  ||||||||||||    
T  23932905 gggaaggggtgtgtcgcaagtaatgttgtcagacgtggtgtttgggctttggattgtattaggcctaagtaaat 23932978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 29569040 - 29569136
Alignment:
Q  213 gctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaa 309  Q
    ||||||||||||||||||| |||| || ||| ||||||| ||||||||  |||||||| ||| | |||  |||||||||  ||||||||| ||||||    
T  29569040 gctcgctccgtgcaccccctttgcgggaaaggggtgtgttgcaagtaagtttgccaaatgtggtgtttaggctttggatgatattgagccaaagtaa 29569136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 23150745 - 23150854
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||||||| | | |||| |||| |||||||||||||  |  || ||| ||||||| ||||||||| ||  || ||| |||||||||||||||    
T  23150745 ttctaccttggggactacgaggagtaccctttatatagaggtgggtgtatgtagagccgttgt-atggcacacgtgtgtccgacggttacgaaatcgtgg 23150843  T
Q  142 gatgtgtaacc 152  Q
    || ||| ||||    
T  23150844 gaagtgaaacc 23150854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 23562002 - 23562111
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||||||| | | |||| |||| |||||||||||||  |  || ||| ||||||| ||||||||| ||  || ||| |||||||||||||||    
T  23562002 ttctaccttggggactacgaggagtaccctttatatagaggtgggtgtatgtagagccgttgt-atggcacacgtgtgtccgacggttacgaaatcgtgg 23562100  T
Q  142 gatgtgtaacc 152  Q
    || ||| ||||    
T  23562101 gaagtgaaacc 23562111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 12094120 - 12094164
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtgga 86  Q
    ||||||||| |||||||| | ||||||||| ||||||||||||||    
T  12094120 ttctaccttagggactgcgaggagtcccctttatatagaggtgga 12094164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 9e-70; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 11 - 309
Target Start/End: Complemental strand, 28068224 - 28067927
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||  | ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  28068224 cagagagtgagggtttagaggaagagagagattctaccttagggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggc 28068125  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||| |||||||||  | |||||||||||  ||    
T  28068124 acacctggctctggcggttacgaaatcgtgggaagtgtaaccgccggagagtttattgcaggaacgtgcagagagacgttgaggctcgtttgaaccagtc 28068025  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtg-tgtcgcaagtaatattgccaaacgtgctatttgtgcttt-ggattgtattgagcctaagta 308  Q
    | ||||||||||||||||||| ||||  |||| ||| | ||| ||||||||  |||||||||||| |  ||||||||| ||||||||||| || ||||||    
T  28068024 tcgctcgctccgtgcaccccc-ttgc--ggaaaaggaggtgttgcaagtaagtttgccaaacgtggtgcttgtgcttttggattgtattgggcgtaagta 28067928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 5931190 - 5931489
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| |||||||||||| | ||||| |||||||||||    ||||||||||| |||||||||||||||||||||| ||||||||||| ||    
T  5931190 agagagtgagggtttagagggagagatagattctatcttggggactgtcgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatgaca 5931289  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    ||||||| |||| | |||| |||||||||||| ||| |||||| |||||| ||||||| |||| ||| || |||||||||| |||||||||||||  |||    
T  5931290 cacctggttctggcggttatgaaatcgtgggaagtgcaaccgccagagagtttattgcgggaatgtgtagagagacgttgtggttcgtttgaaccagtct 5931389  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
       |||||||||||||||||||||   ||||| |||||||| |||||||| |||||||||| | | |||| | | |||||||||||| ||||||||||||    
T  5931390 ctatcgctccgtgcaccccccttgtgtggaaggggtgtgtcacaagtaattttgccaaacgcgatgtttgggttgtggattgtattgggcctaagtaaat 5931489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 311
Target Start/End: Complemental strand, 41037855 - 41037546
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatataga---------ggtggagggctgcagaaccgt 101  Q
    |||||||||| |||| ||||| ||||||   |||||||||||||||||||| ||||||||||| ||||||         ||||||||||||| || ||||    
T  41037855 cagagagtgagggtttagaggaagagatatattctaccttggggactgctatgagtcccctatttatagaatttatagaggtggagggctgcggagccgt 41037756  T
Q  102 tgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgttt 201  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||| |||||||  ||||||||||  ||| ||| | |||| |||    
T  41037755 tgtaatggcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgtgaacgtgcagacagatgttatcgttcattt 41037656  T
Q  202 gaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagc 301  Q
    |||||  ||| ||| ||| |||||||||||||||| || ||| ||||||| ||||||||  ||||||| |||  | |||| ||||||||||||||||||     
T  41037655 gaaccagtctcgcttgcttcgtgcaccccccttgccggaaagtggtgtgttgcaagtaagtttgccaaccgtagtgtttgggctttggattgtattgagt 41037556  T
Q  302 ctaagtaaat 311  Q
    ||||||||||    
T  41037555 ctaagtaaat 41037546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 33 - 297
Target Start/End: Complemental strand, 15620370 - 15620107
Alignment:
Q  33 agagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacg 132  Q
    |||||| | |||||||||||||||||||| ||||||||||| |||||||||| ||||||| ||| | ||||||||||||||| |||||||||| ||||||    
T  15620370 agagatagattctaccttggggactgctatgagtcccctatttatagaggtgaagggctgtagagctgttgtaatggcacacttggctctgacggttacg 15620271  T
Q  133 aaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcacccccc 232  Q
    |||| |||||| |||||||||| |||||| ||||||  ||||||||||| |||||||||| | |||||||||||  ||| ||||||||||| || |||||    
T  15620270 aaattgtgggaagtgtaaccgccagagagtttattgtgggaacgtgcagagagacgttgtggctcgtttgaacccgtctcgctcgctccgtaca-ccccc 15620172  T
Q  233 ttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtatt 297  Q
    ||||| ||||| |||| || ||||||||  ||| ||||||||   ||||  ||||||||||||||    
T  15620171 ttgcaaggaaggggtgcgttgcaagtaagtttgtcaaacgtggcgtttggactttggattgtatt 15620107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 274
Target Start/End: Original strand, 42792481 - 42792742
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||| ||| |||| |||| | ||||| | |||||||||||||| || || ||||||||||  |||||||||||||||||||||| | |||||| |||||    
T  42792481 agagaatgagggtttagagagggagatagattctaccttggggattgttatgagtcccctagttatagaggtggagggctgcagagcagttgtagtggca 42792580  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| || |||||||   |||||||||||| |||    
T  42792581 cacctggctctggcggttacgaaatcgtgggaagtgtaaccgctagagagtttattgcgggaacgtgcagagatacgttgtgactcgtttgaaccggtct 42792680  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtg 274  Q
     ||| |||| |||||||||||||||||  ||| || |||| ||||||||||| | ||||||||    
T  42792681 cgcttgctctgtgcaccccccttgcagtaaag-ggggtgttgcaagtaatatcgtcaaacgtg 42792742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 23495378 - 23495646
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||| |||||||||||   ||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||    
T  23495378 ttctacattggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgg 23495477  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || |||||||||   | ||| ||||||| |||||||| |  |||||||||  |||||||||||||| |||   ||| |||||||| |||||||||  |||    
T  23495478 gaagtgtaaccgtctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccggtctctttcgttccgtgca-cccccttgcgtgga 23495576  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || |||||||||| |||||| |||| ||||||| | |||| |||||||||  ||||||||||||||||||    
T  23495577 aggggtgtgtcgcgagtaattttgcaaaacgtggtgtttgggctttggatgatattgagcctaagtaaat 23495646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 84 - 311
Target Start/End: Complemental strand, 19330052 - 19329825
Alignment:
Q  84 ggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcg 183  Q
    |||||||| |||| || |||||||||||||||  |||||| | ||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||| |    
T  19330052 ggagggctacagagccattgtaatggcacaccaagctctggcggttacgaaatcgtgggaagtgtaaccgccagagagattattgcgggaacatgcagag 19329953  T
Q  184 agacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtg 283  Q
      ||||||| | |||||||||||| ||| |||  |||||||||||||||| ||||||||| | ||| ||||||||||| |||||||||||| |||||| |    
T  19329952 taacgttgtggctcgtttgaaccggtcttgctttctccgtgcacccccctcgcagggaagggatgtctcgcaagtaatgttgccaaacgtggtatttggg 19329853  T
Q  284 ctttggattgtattgagcctaagtaaat 311  Q
    ||||| ||||||||| ||||||||||||    
T  19329852 ctttgaattgtattgggcctaagtaaat 19329825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 46 - 291
Target Start/End: Complemental strand, 20899762 - 20899517
Alignment:
Q  46 accttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatg 145  Q
    ||||||||||||||   ||||||||||| |||| |||||||||||||||||  ||||||||||||||||||  ||||||| ||||||||||||||||| |    
T  20899762 accttggggactgcattgagtcccctatttataaaggtggagggctgcagattcgttgtaatggcacacctaactctgacggttacgaaatcgtgggaag 20899663  T
Q  146 tgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagag 245  Q
    |||||||||  | ||| ||||||| |||||||| |  |||||||||  |||||||||||||  |||   ||| ||||||||||||||| ||  ||||| |    
T  20899662 tgtaaccgcctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcacccccctcgcgtggaaggg 20899563  T
Q  246 gtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggat 291  Q
    ||||||||| |||||| || ||||||||| | |||| |||||||||    
T  20899562 gtgtgtcgcgagtaatttttccaaacgtggtgtttgggctttggat 20899517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 22922839 - 22922645
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||| | |||||||||||||| || || ||||||||||| ||||||||||||||||| |||| |||||||| || |    
T  22922839 cagagagtgagggtttagaggaagagatagattctaccttggggattgttatgagtcccctatttatagaggtggagggctacagagccgttgtagtgac 22922740  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaac 205  Q
    ||||||||||||  | ||||||||||||||||| |||||||||| |||||| ||||||| | ||| | ||| |||| ||||| ||||||||||||    
T  22922739 acacctggctctagcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgctgaaacatacagagagaggttgtggttcgtttgaac 22922645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 36712819 - 36712551
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   ||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||    
T  36712819 ttctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgg 36712720  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
     | |||||||| |  | ||  |||||||  ||||||| |  |||||||||  ||||||||||||   |||   ||| |||||||| |||||| ||  |||    
T  36712719 aaagtgtaaccacctgcgattttattgcgagaacgtggaaagagacgttggggttcgtttgaactagtctctttcgttccgtgca-ccccctagcgtgga 36712621  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || ||||||||||  ||||| |||||||||||| | |||  |||||||| ||||||| ||||||||||||    
T  36712620 aggggtgtgtcgcgggtaattttgccaaacgtggtgtttaggctttggagtgtattgggcctaagtaaat 36712551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 22922242 - 22922050
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||| | |||||||||||| |||| || ||||||||||| ||||||||||||||||| |||| |||||||| || |    
T  22922242 cagagagtgagggtttagaggaagagatagattctaccttgggaactgttatgagtcccctatttatagaggtggagggctacagagccgttgtagtgac 22922143  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttga 203  Q
    |||||||||||||   ||||| ||||||||||| |||||||||| ||| || ||||| | | ||||| ||| |||||||||| ||||||||||    
T  22922142 acacctggctctggtggttacaaaatcgtgggaagtgtaaccgccagaaagtttattcctgaaacgtacagagagacgttgtggttcgtttga 22922050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 297
Target Start/End: Complemental strand, 5590867 - 5590612
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   || |||||||| |||||||||||||||| ||||| |||||||||||||||||||  ||||||| |||||||||| ||||    
T  5590867 ttctaccttggggactgcattgaatcccctatttatagaggtggagggcagcagagccgttgtaatggcacaccttactctgacggttacgaaattgtgg 5590768  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || ||||||||||  | ||| ||||||| |||| ||| |  |||||||||  |||||||||||||  |||   ||| || |||||||| ||| ||  | |    
T  5590767 gaagtgtaaccgcctgcgagtttattgcgggaatgtggaaagagacgttggggttcgtttgaaccagtctctttcgttctgtgcaccctcctcgcgtgaa 5590668  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtatt 297  Q
    || ||| |||||| |||||| |||||||||||| | |||| |||||||| ||||||    
T  5590667 aggggtctgtcgcgagtaattttgccaaacgtggtgtttgggctttggagtgtatt 5590612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 311
Target Start/End: Original strand, 8244511 - 8244814
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| ||||  |||| |||||| | |||||||||| |||||| |  ||||||| ||| ||||||||||||||||||||||  ||| || ||||||    
T  8244511 agagagtgagggttttgaggaagagatagattctaccttgaggactgatgtgagtcccttatttatagaggtggagggctgcagagtcgt-gtgatggca 8244609  T
Q  112 cacc------tggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaac 205  Q
    || |      |||||||| | ||||||||||||||| | |||||| |||||||||| ||||||  ||||||||||  |||||||||| ||||||||||||    
T  8244610 catcattacatggctctggcggttacgaaatcgtggaaagtgtaatcgctagagagtttattgggggaacgtgcaaagagacgttgtggttcgtttgaac 8244709  T
Q  206 cgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaa 305  Q
    |  |||   |||||||||||| |||||||||  ||||| ||||||| ||||||||    |||||| | | | |||   |||||||||||||| |||||||    
T  8244710 cagtctctttcgctccgtgca-cccccttgcgtggaaggggtgtgttgcaagtaactcagccaaatgcggtgtttagactttggattgtattaagcctaa 8244808  T
Q  306 gtaaat 311  Q
    ||||||    
T  8244809 gtaaat 8244814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 38608297 - 38608436
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||| ||||||||   ||||||||||| |||||||||||||| || |||| |||||||   |||||||||||||||| | |||||||||||||||    
T  38608297 ttctaccttagggactgcattgagtcccctatttatagaggtggaggtctacagagccgttgtggaggcacacctggctctggcggttacgaaatcgtgg 38608396  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcag 181  Q
    || |||||||||| | |||| ||||||| |||||||||||    
T  38608397 gaagtgtaaccgccaaagagtttattgcgggaacgtgcag 38608436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 33622663 - 33622392
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgac---tgttacgaaatcg 138  Q
    ||||| ||| ||||||||   ||||||||||| |||||||||||||||||||||| ||||||||||  |||||||  |||||||    |||||||||||     
T  33622663 ttctatcttagggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaattacacaccttactctgacggtggttacgaaatcc 33622564  T
Q  139 tgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcag 238  Q
    ||||| ||||||||||  | ||| ||||||| |||||||  |  |||||||||  |||||||| ||||  |||   ||| || ||||| ||||||  |      
T  33622563 tgggaagtgtaaccgcctgtgagtttattgctggaacgtagaaagagacgttggggttcgtttaaaccagtctctttcgttctgtgca-ccccctcacgt 33622465  T
Q  239 ggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||| |||||||||| |||||| ||||||||| || | |||| |||||||||||||||| || |||||||||    
T  33622464 ggaaggggtgtgtcgcgagtaattttgccaaacatgatgtttgggctttggattgtattgggcttaagtaaat 33622392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 163 - 308
Target Start/End: Original strand, 24095343 - 24095488
Alignment:
Q  163 ttattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaata 262  Q
    ||||||| ||||||||||  |||||||||  ||| |||||||||| ||| ||| |||||||||| |||||| ||  ||| | |||||| |||||||||      
T  24095343 ttattgcgggaacgtgcaaagagacgttggggtttgtttgaaccggtctcgcttgctccgtgcatccccctcgcgcggacggggtgtgccgcaagtaacg 24095442  T
Q  263 ttgccaaacgtgctatttgtgctttggattgtattgagcctaagta 308  Q
    |||||||||||| |||||| |||||||||||||||| |||||||||    
T  24095443 ttgccaaacgtggtatttgggctttggattgtattgggcctaagta 24095488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 311
Target Start/End: Original strand, 13537880 - 13538028
Alignment:
Q  163 ttattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaata 262  Q
    ||||||| |||||||| |  |||||||||  |||| ||||||||  |||   ||| ||||| ||||||||| ||  ||||| |||||||||| ||||||     
T  13537880 ttattgcgggaacgtggaaagagacgttggggttcatttgaaccagtctctttcgttccgtacacccccctcgcgtggaaggggtgtgtcgcgagtaatt 13537979  T
Q  263 ttgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||||||||||| | |||| ||||||||| |||||| ||||||||||||    
T  13537980 ttgccaaacgtgatgtttgggctttggatggtattgggcctaagtaaat 13538028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 311
Target Start/End: Original strand, 22510097 - 22510280
Alignment:
Q  128 ttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcac 227  Q
    |||||||||||||||| ||||||||||  | ||| ||||||| ||||| || |  ||||||||| ||||||||| ||||  |||   ||| |||||||||    
T  22510097 ttacgaaatcgtgggaagtgtaaccgcctgtgagtttattgcgggaacatggaaagagacgttggagttcgttttaaccagtctctttcgttccgtgcac 22510196  T
Q  228 cccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || ||| ||  ||||| ||||||||||  ||||| ||  |||||||| | ||||  ||||  | ||||||| ||||||||||||    
T  22510197 ccacctcgcgtggaaggggtgtgtcgcgggtaattttatcaaacgtggtgtttgaactttatagtgtattgggcctaagtaaat 22510280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 18953563 - 18953606
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtgg 85  Q
    |||||||||||||||||| ||||||||||| |||||||||||||    
T  18953563 ttctaccttggggactgcgaagagtcccctttatatagaggtgg 18953606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 28421637 - 28421594
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtgg 85  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||    
T  28421637 ttctaccttggtgactgcgaagagtcccctttatatagaggtgg 28421594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 1684503 - 1684435
Alignment:
Q  46 accttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacac 114  Q
    |||||||||| ||| |||||| |||| |||||||||||||  |  ||||||  ||||||||||||||||    
T  1684503 accttggggattgcgaagagttccctttatatagaggtgggtgaatgcagagtcgttgtaatggcacac 1684435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 42 - 313
Target Start/End: Original strand, 38621833 - 38622104
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   ||||||| |||||||||||||||||||||||||| ||||||||||||||||  ||||||||   |||||||||||||||    
T  38621833 ttctaccttggggactgcagtgagtcccttatatatagaggtggagggctgcagagccgttgtaatggcacatttggctctggtggttacgaaatcgtgg 38621932  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
     | ||||||| || | | |  ||||||| ||||||||||| |||||||||| |||||||| ||||||||| |||||||||||| |||||||| || ||||    
T  38621933 aaagtgtaactgccaaacaatttattgcgggaacgtgcagagagacgttgtggttcgttttaaccgatctcgctcgctccgtggacccccctcgcgggga 38622032  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaatag 313  Q
    || ||| ||||||||||||| | || ||||||| | |||| |||||||||||||||| ||||||||||||||    
T  38622033 aggggtatgtcgcaagtaatgtcgctaaacgtgatgtttgagctttggattgtattgggcctaagtaaatag 38622104  T

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Target: chr1; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 19967618 - 19967320
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | ||||||||| |||||||||  ||||||||||| ||||||||||||||| |||| ||||||||||||| ||    
T  19967618 agagagtgagggtttagaggaagagatggattctaccttagggactgctttgagtcccctatttatagaggtggagggttgcataaccgttgtaatgaca 19967519  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||| | ||||||||||||||||  |||||||||| |||||| ||||||| ||||||||||| |||||||||| |||||||||||||  |||    
T  19967518 cacctggctctggcggttacgaaatcgtgggtggtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtct 19967419  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
       ||||||||||||||||| ||    ||||| ||||||||||| ||||  ||| |||||||| | ||||  |||||||| |||||| ||||||||||||    
T  19967418 ctttcgctccgtgcaccccc-ttatgtggaaggggtgtgtcgcaggtaactttgtcaaacgtggtgtttggactttggatcgtattgggcctaagtaaat 19967320  T

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Target: chr1; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 42 - 297
Target Start/End: Original strand, 9858997 - 9859256
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacc----tggctctgactgttacgaaatc 137  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||  | ||||||     |||||||||| |||||||||||    
T  9858997 ttctaccttggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtggttgcacacacacttggctctgacggttacgaaatc 9859096  T
Q  138 gtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgca 237  Q
    |||||| |||||||||| | |||| ||||||| ||||||||||| |||||||||| ||||||||||||   |||  ||||||| ||||||||||||||||    
T  9859097 gtgggaagtgtaaccgccaaagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaacgagtctcactcgctctgtgcaccccccttgca 9859196  T
Q  238 gggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtatt 297  Q
    || ||| ||||||| ||||||||  |||||||||||| | ||||   |||||||||||||    
T  9859197 ggaaaggggtgtgttgcaagtaagtttgccaaacgtggtgtttggattttggattgtatt 9859256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 19442310 - 19442012
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | |||||||||||||||||||  ||||||||||| ||||||||||||| |||||| | ||||||||||| ||    
T  19442310 agagagtgagggtttagaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagtgctgcaaagccgttgtaatgaca 19442211  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    || ||| ||||| | |||||||||||| |||| || ||||||| |||||| ||||||  |||||||| || |||||||||| ||||| |||||||  |||    
T  19442210 catctgactctggcggttacgaaatcgggggaagtataaccgccagagagtttattgtgggaacgtgtagagagacgttgtggttcgattgaaccagtct 19442111  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
       ||||||||  || ||||||||   ||||| ||||||||||||||||  |||||||||||| | |||| | |||||||||||||| ||||||||||||    
T  19442110 ctttcgctccgcaca-cccccttgtgtggaaggggtgtgtcgcaagtaactttgccaaacgtggtgtttgagttttggattgtattgggcctaagtaaat 19442012  T

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Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 313
Target Start/End: Complemental strand, 8990962 - 8990660
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||| | | ||||||| ||||||||||   ||||||||||| || ||||||||||||||| ||| |||||||||||||    
T  8990962 cagagagtgagggtttagaggaagagttagattctaccgtggggactgcagtgagtcccctatttacagaggtggagggctgtagagccgttgtaatggc 8990863  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||||||||  | ||||||||||||||||| ||||||| |  |||||| ||||||   |||||||||| |||||||||| | | | |||||||| ||    
T  8990862 acacctggctctagcggttacgaaatcgtgggaagtgtaactgtcagagagtttattgtgagaacgtgcagagagacgttgtggcttgcttgaaccggtc 8990763  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | |||| |||||||||||| | | |  |||||| || |||||||| ||||| ||| |||||| | | ||||  |||| ||| ||| ||| ||||||| ||    
T  8990762 tcgctcactccgtgcaccctcttcgtggggaaggggcgtgtcgcaggtaatgttgtcaaacgaggtgtttggactttagatagtactgaacctaagtcaa 8990663  T
Q  311 tag 313  Q
    |||    
T  8990662 tag 8990660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 8995607 - 8995340
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||||| |||   ||||||||||| |||||||||||||||||||||| |||||| | || ||||||| |||||  | |||||||||||||||    
T  8995607 ttctaccttggggaatgcagtgagtcccctatttatagaggtggagggctgcagagccgttg-attgacacacctagctctagcggttacgaaatcgtgg 8995509  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || |||||||||| | |||| ||||||| ||||||||| | |||||||||| | | | |||||||| ||| ||||||||||||||| ||||| |  || |    
T  8995508 gaagtgtaaccgccatagagtttattgcgggaacgtgctgagagacgttgtggcttgcttgaaccggtctcgctcgctccgtgcac-cccctcgtgggaa 8995410  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || ||| ||||||||||||| ||| |||||||| | |||  ||||| ||| |||||| | ||||||||||    
T  8995409 aggggtatgtcgcaagtaatgttgtcaaacgtggtgtttaggctttagatagtattgggtctaagtaaat 8995340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 24974056 - 24973788
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||| ||||||   ||||||||||| ||||||| | |||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||    
T  24974056 ttctaccttggtgactgcattgagtcccctatttatagagttagagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgg 24973957  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || ||||||||||  | ||| ||||||  |||| ||  |  |||||||||  |||||||||||||| |||   ||| || ||||| |||||||||  |||    
T  24973956 gaagtgtaaccgcctgtgagtttattgtgggaatgttgaaagagacgttgaggttcgtttgaaccggtctctttcgttctgtgca-cccccttgcttgga 24973858  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || | ||||||||||||||| |||| ||||||| | |||| |||||||||  ||||| ||||||||||||    
T  24973857 agggatgtgtcgcaagtaattttgcaaaacgtggtgtttgggctttggatgatattgggcctaagtaaat 24973788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 307
Target Start/End: Complemental strand, 21817908 - 21817637
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   ||||||||||| |||| ||||||| ||| ||||| |||||||||||||||||||  ||||||| |||||||||||||||    
T  21817908 ttctaccttggggactgcattgagtcccctatttataaaggtggatggccgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgg 21817809  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcacc------ccccttg 235  Q
    || ||||||| ||  | ||| ||||||| |||||||| |  |||||| ||  ||||||||||||||||||   ||| ||||||||||      |||||      
T  21817808 gaagtgtaacagcctgtgagtttattgcgggaacgtggaaagagacgctggggttcgtttgaaccgatctctttcgttccgtgcacccccccccccctca 21817709  T
Q  236 cagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagt 307  Q
    |  ||||| |||||||||| |||||| |||||||||||| | |||| ||||||||| ||| || ||||||||    
T  21817708 cgtggaaggggtgtgtcgcgagtaattttgccaaacgtggtgtttgggctttggatagtactgggcctaagt 21817637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 22186156 - 22186045
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||||||||||   |||||||||| |||||||||||| ||||||||| |||||||||||||||||||  ||| ||| ||||| |||||||||    
T  22186156 ttctaccttggggactgctttaagtcccctatttatagaggtggatggctgcagagccgttgtaatggcacaccttactcggacggttacaaaatcgtgg 22186057  T
Q  142 gatgtgtaaccg 153  Q
    || |||||||||    
T  22186056 gaagtgtaaccg 22186045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 309
Target Start/End: Original strand, 33028924 - 33029090
Alignment:
Q  143 atgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgttt-gaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    ||||||||||| |||||||||||||||  |||||| ||  |||||||||| ||| |||| |||||| ||  ||| ||||||| ||||||| |  | ||||    
T  33028924 atgtgtaaccgttagagagattattgcgagaacgtacatagagacgttgtggtttgttttgaaccggtcccgcttgctccgttcaccccc-tcacgggga 33029022  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaa 309  Q
    || ||||||||||||||||||| | |||||||| | |||| |||||||||| ||||| ||||||||||    
T  33029023 aggggtgtgtcgcaagtaatatagtcaaacgtggtgtttgggctttggattatattgtgcctaagtaa 33029090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 21815693 - 21815619
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacct 116  Q
    ||||||||||| ||||||   ||||||| ||| |||||||||||||||||||||| | |||||||||||||||||    
T  21815693 ttctaccttggagactgcattgagtcccatatttatagaggtggagggctgcagagctgttgtaatggcacacct 21815619  T

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Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 307
Target Start/End: Complemental strand, 21815605 - 21815461
Alignment:
Q  163 ttattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaata 262  Q
    ||||||| |||||||| |  |||||||||  |||||||||||||  |||   ||| ||||||||||||||| ||  ||||| |||||||| | ||||||     
T  21815605 ttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcacccccctcgcgtggaaggggtgtgtcacgagtaatt 21815506  T
Q  263 ttgccaaacgtgctatttgtgctttggattgtattgagcctaagt 307  Q
    |||||||||||| | |||| | ||||||| ||| || ||||||||    
T  21815505 ttgccaaacgtggtgtttgggatttggatggtactgggcctaagt 21815461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 311
Target Start/End: Original strand, 49472312 - 49472501
Alignment:
Q  119 ctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgc 218  Q
    ||||||| ||||||||||||| |   || |||||||  | ||| ||||||| |||||||| |  |||||||||  |||| ||||||||| |||   |||     
T  49472312 ctctgacggttacgaaatcgtaga--gtataaccgcatgtgagtttattgcgggaacgtggaaagagacgttggggttcatttgaaccggtctctttcgt 49472409  T
Q  219 tccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||||| | ||  || || ||||| |||| |||||| ||| |||||| | | ||||  |||||||| |||||| ||||||||||||    
T  49472410 tccgtgcaccccc-tcgcgtgggaggggtgtttcgcgagtaattttgtcaaacgcggtgtttggactttggatggtattgggcctaagtaaat 49472501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 129; Significance: 9e-67; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 253312 - 253612
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||| | | |||||||||||||||||    |||||||||||||||| ||||||| ||||||| |  ||||||||||||    
T  253312 cagagagtgacggtttagaggaagagttagattctaccttggggactgtagtgagtcccctatatataaaggtggacggctgcaaagtcgttgtaatggc 253411  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || |||||| ||||||| ||||||||||| |||| ||||| |||| ||||||||| ||    
T  253412 acacctggctctggcggttacgaaatcgtgggaagtgtaactgccagagagtttattgcgggaacgtgcagagagatgttgtggttcatttgaaccggtc 253511  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | || | |||||||||| |||||  | |||||| ||||||||||| ||||| |||||||||||| | |||| | |||||||||||||| ||||||| |||    
T  253512 ttgcactctccgtgcactcccctctcggggaaggggtgtgtcgcacgtaatgttgccaaacgtggtgtttgggatttggattgtattgggcctaagaaaa 253611  T
Q  311 t 311  Q
    |    
T  253612 t 253612  T

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Target: scaffold0008; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 70 - 311
Target Start/End: Original strand, 242731 - 242972
Alignment:
Q  70 ctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgc 169  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||  | |||||| |||||||||| ||||||| || | |||| |||||||    
T  242731 ctatatatagaggtggagggcggcagagccgttgtaatggcacacctggctcttgcggttacgtaatcgtgggaagtgtaactgccaaagagtttattgc 242830  T
Q  170 aggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaa 269  Q
     ||||||||||  |||||||||| |||||||||||||| ||| ||||||||||||||||| |||  | |||||| ||||||||||||||||| |||||||    
T  242831 gggaacgtgcaaagagacgttgtggttcgtttgaaccggtcttgctcgctccgtgcacccgcctatcggggaaggggtgtgtcgcaagtaatgttgccaa 242930  T
Q  270 acgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || || | |||| ||||| |||||||||| ||||||||||||    
T  242931 acttggtgtttgggctttagattgtattgggcctaagtaaat 242972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 47615 - 47392
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | |||||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  47615 agagagtgagggtttagaggaagagatagattctaccttggggactgctttgagtcccctatttatagaggtggagggctgcagagccgttgtaatggca 47516  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    ||| |||||||| | ||||| |||| |||||| |||||||||| |||||| ||||||| ||||||||||| |||||||||| |||||||||||||  |||    
T  47515 cacttggctctggcggttacaaaattgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtct 47416  T
Q  212 agctcgctccgtgcaccccccttg 235  Q
       |||||||||||||||||||||    
T  47415 ctttcgctccgtgcaccccccttg 47392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 56330 - 56259
Alignment:
Q  240 gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||| ||||||||||||||||  | |||||||||| | |||| |||||||||||||||| ||||||||||||    
T  56330 gaaggggtgtgtcgcaagtaacttcgccaaacgtggtgtttgggctttggattgtattgggcctaagtaaat 56259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 22915051 - 22915349
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||| | |||||||||||||||||||| ||||||||||| |||| |||||||| |||||||| ||||||||||||     
T  22915051 cagagagtgagggtttagaggaagagatagattctaccttggggactgctatgagtcccctatttataaaggtggagagctgcagagccgttgtaatggt 22915150  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    |||| |||||| | | |||| |||||||||||| ||||||| ||||||||| ||||||| |||||||| || ||||||||||  |||||||||||   ||    
T  22915151 acacttggctccggcggttatgaaatcgtgggaagtgtaacagctagagagtttattgcgggaacgtgaagagagacgttgtgattcgtttgaactagtc 22915250  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | ||||||||||||||  |||||||| || | | ||||||| ||||||||  ||| |||||||| | |||| ||||  |||||||||| |||||||||||    
T  22915251 tcgctcgctccgtgca--ccccttgcgggaagggggtgtgttgcaagtaaacttgtcaaacgtggtgtttgcgcttcagattgtattgggcctaagtaaa 22915348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 42 - 309
Target Start/End: Complemental strand, 16853178 - 16852911
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||| |||||||||||||   ||||||||||| |||||||||||||||||||| |   |||||||||||||||||||||||| | |||||||||||||||    
T  16853178 ttctcccttggggactgcattgagtcccctatttatagaggtggagggctgcaaatatgttgtaatggcacacctggctctggcggttacgaaatcgtgg 16853079  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || |||||||||| |||||| ||||||| | ||||||||| |||||||||| | | |||||||||| | |  ||||||||||| ||| |||| |||| ||    
T  16853078 gaagtgtaaccgccagagagtttattgcggtaacgtgcagagagacgttgtggcttgtttgaaccggtgtcactcgctccgtgtacctccctcgcagaga 16852979  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaa 309  Q
     | |||| ||||||||| || || |||||||||  ||||| |||||||||||||||| ||||||||||    
T  16852978 ggtggtgcgtcgcaagtgatgttaccaaacgtggaatttgagctttggattgtattgggcctaagtaa 16852911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 83 - 311
Target Start/End: Original strand, 19790346 - 19790574
Alignment:
Q  83 tggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagc 182  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||  |||||| ||||||  |||||||||||     
T  19790346 tggagggctgcagagccgttgtaatggcacacctgactctgacggttacgaaatcgtgggaagtgtaaccgtcagagagtttattgtgggaacgtgcaga 19790445  T
Q  183 gagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgt 282  Q
    |||||||||| |||||||||||||  |||   |||||| ||||||||||||||   ||||| || |||||||||||||  || ||||||  | | ||||     
T  19790446 gagacgttgtggttcgtttgaaccagtctctttcgctctgtgcaccccccttgtctggaaggggcgtgtcgcaagtaactttaccaaacacggtgtttgg 19790545  T
Q  283 gctttggattgtattgagcctaagtaaat 311  Q
    | ||||||| |||||| ||||||||||||    
T  19790546 gttttggatggtattgggcctaagtaaat 19790574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 16914705 - 16915005
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| ||||  |||| |||||| | |||| | |||||||||| |||||| || ||||||||||||||||||||||||||| || ||||||||||    
T  16914705 cagagagtgagggttttgaggaagagatagattctgctttggggactgttaagagccctctatatatagaggtggagggctgcagagccattgtaatggc 16914804  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    |||  | | |||| | ||||||||||||||||| ||||||||  |||||| || ||||| ||||||||||  |||||||||  | |||||||||||| ||    
T  16914805 acagatcggtctggcggttacgaaatcgtgggaggtgtaaccagtagagaaataattgcgggaacgtgcaaagagacgttgcggctcgtttgaaccggtc 16914904  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
       || ||||||| |||||||||  | | || | ||| ||||||||||||  || ||||||||| | |||| |  | ||||||||||| |||||||||||    
T  16914905 cttcttgctccgttcacccccctcacggagagggggtatgtcgcaagtaagttttccaaacgtggtgtttgggtatgggattgtattgggcctaagtaaa 16915004  T
Q  311 t 311  Q
    |    
T  16915005 t 16915005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 88 - 311
Target Start/End: Original strand, 44635823 - 44636047
Alignment:
Q  88 ggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagac 187  Q
    ||||||||| ||||||||||||||||| ||  || | | ||||||||||||||||| |||||||||| |||||||   | || |||||||||   |||||    
T  44635823 ggctgcagagccgttgtaatggcacacgtgagtccgtcggttacgaaatcgtgggaagtgtaaccgccagagagagattcgcgggaacgtgcgaagagac 44635922  T
Q  188 gttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgcttt 287  Q
    ||||||||||||||||||   ||| ||| ||||||| || |||| | || |||||| ||||||| || |||||| ||| ||||| || ||||||  ||||    
T  44635923 gttgtagttcgtttgaactagtctcgcttgctccgtacatccccttcgcggggaagcggtgtgttgcgagtaatgttgtcaaacatggtatttgaccttt 44636022  T
Q  288 gga-ttgtattgagcctaagtaaat 311  Q
     || |||||||||||||||||||||    
T  44636023 cgatttgtattgagcctaagtaaat 44636047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 11 - 311
Target Start/End: Complemental strand, 3559318 - 3559022
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||| ||| |||| |||||||||| | | |||||||||||| |||| |||||||||||||||||||||| |||  ||||||||| ||||||||||||     
T  3559318 cagagaatgagggtttagagggagag-tagattctaccttgggaactgttaagagtcccctatatatagagatgggtggctgcagagccgttgtaatggt 3559220  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
     ||  ||   ||| | ||||||||||||||| | |||||||| | | |||||   |||| ||||| |||   |||| |||| ||||||||||||||| ||    
T  3559219 tcatgtgttcctg-cagttacgaaatcgtggaaagtgtaacctccaaagagagatttgcgggaacatgcgaagagatgttgcagttcgtttgaaccggtc 3559121  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | | | |||| ||||| |||||| || |||||| ||||||| || |||||| |||||||| | | |||||| || ||||||  ||||||| ||| |||||    
T  3559120 tcgtttgctctgtgca-ccccctcgcggggaaggggtgtgttgcgagtaatgttgccaaatgcggtatttgggc-ttggataatattgagactatgtaaa 3559023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 22006522 - 22006590
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  22006522 ttctaccttggggactgctacgagtcccttatatatagaggtggagggctgcagagtcgttgtaatggc 22006590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 22014039 - 22014107
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  22014039 ttctaccttggggactgctacgagtcccttatatatagaggtggagggctgcagagtcgttgtaatggc 22014107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 311
Target Start/End: Complemental strand, 13016637 - 13016465
Alignment:
Q  138 gtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgca 237  Q
    |||||| |||||||||| |||||||   | || |||||||||   ||||||||||||||||||||||| ||||| ||| |||  ||||| |||| |||      
T  13016637 gtgggaagtgtaaccgccagagagagattcgcgggaacgtgcgaagagacgttgtagttcgtttgaactgatctcgcttgctatgtgca-cccctttgtg 13016539  T
Q  238 gggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||||| ||||||| |||  |||| |||||||||||  |||||| |||| |  ||||| || ||||||||||||    
T  13016538 gggaaggggtgtgttgcacataatgttgccaaacgttgtatttgggcttggatttgtactgggcctaagtaaat 13016465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 1998006 - 1998087
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgc 93  Q
    ||||||||| |||| ||||  |||||  | |||||||||||||||||||  |||| |||||| ||||||||||||| |||||    
T  1998006 agagagtgagggtttagagacagagacagattctaccttggggactgctttgagtaccctatttatagaggtggagagctgc 1998087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 8733434 - 8733483
Alignment:
Q  62 agagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||||||||||||||||||  ||||  ||||||||||||||||||    
T  8733434 agagtcccctatatatagaggtggttggctaaagaaccgttgtaatggca 8733483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 9085675 - 9085724
Alignment:
Q  62 agagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||||||||||||||||||  ||||  ||||||||||||||||||    
T  9085675 agagtcccctatatatagaggtggttggctaaagaaccgttgtaatggca 9085724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 19773385 - 19773462
Alignment:
Q  11 cagagagtgatggttaagaggga-gagatcggttctaccttggggactgctaagagtcccctatatatagaggtggag 87  Q
    |||||||||| |||| ||| ||| ||||| | |||||||||||||||||||  ||||| ||||| |||||||||||||    
T  19773385 cagagagtgagggtttagaaggaagagatagattctaccttggggactgctgtgagtctcctatttatagaggtggag 19773462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 3786563 - 3786606
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtgg 85  Q
    |||||||||||||||||| | ||||||||| |||||||||||||    
T  3786563 ttctaccttggggactgcgaggagtcccctttatatagaggtgg 3786606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 3824256 - 3824299
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtgg 85  Q
    |||||||||||||||||| | ||||||||| |||||||||||||    
T  3824256 ttctaccttggggactgcgaggagtcccctttatatagaggtgg 3824299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 44451739 - 44451630
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||| | ||| | ||||||||| |||||||||||||  |  |||||| ||||||||||||||||| ||  || ||| ||||| |||| | ||    
T  44451739 ttctaccttggg-attgcgaggagtcccctttatatagaggtgggtgaatgcagagccgttgtaatggcacacatgtgtccgacggttacaaaatagggg 44451641  T
Q  142 gatgtgtaacc 152  Q
    || ||||||||    
T  44451640 gaagtgtaacc 44451630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 311
Target Start/End: Complemental strand, 151490 - 151192
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| | ||| |||||| | ||||||||| |||| ||||  ||||||||||| |||||||||||||||||||||| |||||||| ||| |    
T  151490 agagagtgagggtttaaaggaagagatagattctaccttagggaatgctgtgagtcccctatttatagaggtggagggctgcagagccgttgtagtggaa 151391  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
     ||||||||||  | ||||||||||||||||| ||| ||| || |||||| ||||||||||||||| ||| |||||||||| ||||||||||| || |||    
T  151390 gacctggctctagcggttacgaaatcgtgggaagtgaaac-gccagagagtttattgcaggaacgtacagagagacgttgtggttcgtttgaatcggtct 151292  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
     ||||||||||||||||||| |||  |||||| ||| ||  ||||||||  |||||||||||  | |||| |||||||||||||||  ||||||||||||    
T  151291 cgctcgctccgtgcaccccctttgtggggaaggggtatgctgcaagtaagtttgccaaacgtagtgtttgggctttggattgtattaggcctaagtaaat 151192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 13 - 311
Target Start/End: Complemental strand, 30256 - 29958
Alignment:
Q  13 gagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcac 112  Q
    |||||||| | || ||||| |||||| | ||||||||| |||||||||  ||||||| ||| |||||||||||||||||||||| || |||||| || ||    
T  30256 gagagtgaggatttagaggaagagatagattctaccttagggactgctgtgagtcccgtatttatagaggtggagggctgcagagccattgtaacggaac 30157  T
Q  113 acctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatcta 212  Q
    |||||||||||   |||||||||| |||||| |||||||| | |||||  ||||||| |||||||| || |||||||||| |||||||||||||  |||     
T  30156 acctggctctggtggttacgaaattgtgggaagtgtaacctccagagattttattgcgggaacgtgtagagagacgttgtggttcgtttgaaccagtctc 30057  T
Q  213 gctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
      |||||||||||||| |||||||| ||||| ||||||| ||| ||||  |||||||||||||| |||| |||||||||||| ||| |||||| |||||    
T  30056 tttcgctccgtgcacctcccttgcatggaaggggtgtgttgcatgtaactttgccaaacgtgctgtttgggctttggattgtgttgggcctaattaaat 29958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 2999 - 2729
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||| ||||||| || ||||||| ||||||||||||||||| |||||||| | |||||||||||||||| ||||||| | |||||||||||||||    
T  2999 ttctaccttcgggactgttatgagtccc-tatatatagaggtggagagctgcagagctgttgtaatggcacaccaggctctggcggttacgaaatcgtgg 2901  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcacc--ccccttgcagg 239  Q
    || ||||||||||||||||||||||| | ||||||||||| ||||| ||||  ||||||||||||| ||| | ||||||||||||||  ||||| ||||     
T  2900 gaagtgtaaccgctagagagattattactggaacgtgcagagagacattgtgtttcgtttgaaccggtcttgttcgctccgtgcacccccccctcgcaga 2801  T
Q  240 gaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||| | ||||| ||||||||| ||||||||  || | |||| |||||| ||||||||  ||||| ||||||    
T  2800 gaagggttgtgtagcaagtaatgttgccaaagatggtgtttgggctttgaattgtattaggcctatgtaaat 2729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 311
Target Start/End: Complemental strand, 4397 - 4097
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||| | ||||  ||||||||||| |  ||||||||||| |||||||||||||||||||||| |||||||| ||||    
T  4397 cagagagtgagggtttagaggaagagatagattctctcttggggactgatgtgagtcccctatttatagaggtggagggctgcagagccgttgtagtggc 4298  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    |||||||||||||   ||||||||||||||||||||||||| || |||||| |||||||  ||||||||||  ||||||||| |||||||||||||| ||    
T  4297 acacctggctctggtggttacgaaatcgtgggatgtgtaactgcgagagagtttattgcgagaacgtgcagatagacgttgtggttcgtttgaaccggtc 4198  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
      |||||||||||| |||||| | |  | |||| ||| ||  ||||||||  |||||||||||| | ||||  ||||||||||||||   ||||||||||    
T  4197 ccgctcgctccgtgaacccccttcgtggagaaggggtatgctgcaagtaagtttgccaaacgtggtgtttggactttggattgtatttgacctaagtaaa 4098  T
Q  311 t 311  Q
    |    
T  4097 t 4097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 42 - 311
Target Start/End: Original strand, 68703 - 68972
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||| |||||   ||||||||||| |||||||||||||||||||| | ||||||||||| ||||||| ||| || | |||||||||||||||    
T  68703 ttctaccttgggcactgcggtgagtcccctatttatagaggtggagggctgcaaagccgttgtaatgacacaccttgctttggcggttacgaaatcgtgg 68802  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || ||||||||||||||||| ||||||| ||||||||    |||||||||| | ||||||||||   ||| | | ||||||||||||||||| |||| ||    
T  68803 gaagtgtaaccgctagagagtttattgcgggaacgtgggaagagacgttgtggctcgtttgaactagtctcggttgctccgtgcacccccctcgcagaga 68902  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    || ||||||||||||||||| |||| |||||||   | || |||||| ||||||||| ||||||||||||    
T  68903 aggggtgtgtcgcaagtaatgttgcaaaacgtggagtctgggctttgaattgtattgggcctaagtaaat 68972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 74844 - 75039
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    ||||||||||||||  ||||| |||||| | |||||||||||||| |||   ||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  74844 cagagagtgatggtatagaggaagagatagattctaccttggggaatgcggtgagtcccctatttatagaggtggagggctgtagagccgttgtaatggc 74943  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaacc 206  Q
    ||||||||||||| | |||| |||||||| ||| |||||||||| |||||| ||||||| ||||||||| | || ||||||| | |||||||||||    
T  74944 acacctggctctggcagttatgaaatcgtcggaagtgtaaccgccagagagtttattgcgggaacgtgcggagacacgttgtggctcgtttgaacc 75039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 311
Target Start/End: Complemental strand, 1237 - 941
Alignment:
Q  15 gagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacac 114  Q
    |||||| |||| ||||| |||||| | |||||| |||| |||||||  ||||||||||| ||||||||||||||||| || | |||||||||||| ||||    
T  1237 gagtgagggtttagaggaagagatagattctacgttggagactgctgtgagtcccctatttatagaggtggagggctacatagccgttgtaatggaacac 1138  T
Q  115 ctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagc 214  Q
    ||||||||  |  |||||||||||||||| |||||||||| | |||| ||||||||||||| ||||| || ||||||| |||||||||||||  ||| ||    
T  1137 ctggctctagcgattacgaaatcgtgggaagtgtaaccgccatagagtttattgcaggaacatgcagagaaacgttgtggttcgtttgaaccagtctcgc 1038  T
Q  215 tcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||||||||| | |  | |||| ||| ||  ||||||||  |||| ||||||| | |||| ||||||||||||||||  |||||||||||    
T  1037 tcgctccgtgcacccccttcgtggagaaggggtatgctgcaagtaagtttgctaaacgtggtgtttgggctttggattgtattggacctaagtaaat 941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 42 - 311
Target Start/End: Complemental strand, 16486 - 16217
Alignment:
Q  42 ttctaccttgggg-actgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtg 140  Q
    ||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||| || ||||||||| ||||||||||||| | ||||| ||||||||    
T  16486 ttctaccttgggggactgctttgagtcccctatttatagaggtggagggctgcagagccattgtaatggtacacctggctctggcggttacaaaatcgtg 16387  T
Q  141 ggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggg 240  Q
    ||| |||||||| | |||||| ||||||| ||||||||||| |||| ||||| |||||||||||||  |||   |||||||||||| ||||||||  ||     
T  16386 ggaagtgtaaccaccagagagtttattgcgggaacgtgcagagagatgttgtggttcgtttgaaccagtctcattcgctccgtgca-cccccttgtggga 16288  T
Q  241 aagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||| ||||||||||| ||||  || |||||| |  | |||| ||||||| |||||||| ||||||||||||    
T  16287 aaggggtgtgtcgcatgtaacttttccaaacatagtgtttgggctttgggttgtattgggcctaagtaaat 16217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 12322 - 12619
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| | || | | || ||||||||||  || || |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  12322 cagagagtgagggtttagaggaatagttagattataccttggggtttgttatgagtcccctatatatagaggtgaagggctgcagagccgttgtaatggc 12421  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    ||||| ||||||| | ||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||||   ||||||||| | || ||| ||||| ||    
T  12422 acaccaggctctggcggttacaaaatcatgggaagtgtaaccgctagagagattattgcgggaacgtgca--cagacgttgtggctcatttaaaccggtc 12519  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | | |||||| |||||  ||||| || | |||  ||||||||||||||||| |||| ||||||| | |||| |||||| ||||||||  |||||||||||    
T  12520 ttgttcgctctgtgca-tcccctcgcggagaatgggtgtgtcgcaagtaatgttgcaaaacgtggtgtttgggctttgaattgtattaggcctaagtaaa 12618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 104; Significance: 7e-52; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 1609 - 1828
Alignment:
Q  13 gagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcac 112  Q
    |||||||| |||| ||||| |||||| | |||||| |||||||||| |  ||||||||||| |||||||||||| ||||||||| ||||||||||||||     
T  1609 gagagtgagggtttagaggaagagatagattctacattggggactgttgtgagtcccctatttatagaggtggatggctgcagagccgttgtaatggcat 1708  T
Q  113 acctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagag-attattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    || |||||||| | ||||||||||||||||| |||||||||| ||||||  ||||||| ||||||||||| |||||||||| ||||||||||||| ||||    
T  1709 acttggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagttttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccaatct 1808  T
Q  212 agctcgctccgtgcaccccc 231  Q
       |||||||| ||||||||    
T  1809 ctttcgctccgggcaccccc 1828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 15364 - 15514
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||||||| |||| ||||| |||||| | |||||||  |||||||| || ||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  15364 cagagagtgagggtttagaggaagagatagattctaccgcggggactgttatgagtcccctatttatagaggtggagggctgcagagccgttgcaatggc 15463  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagag 161  Q
    |  |||| ||||| | ||||| ||||||||||| |||||||||| ||||||    
T  15464 atgcctgactctggcggttactaaatcgtgggaagtgtaaccgccagagag 15514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 12 - 291
Target Start/End: Complemental strand, 1721 - 1444
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| |||| ||||| |||||| | |||||||||||||||||||  |||| |||||| |||||||||||| ||||| ||| | ||||||||||||    
T  1721 agagagtgagggtttagaggaagagatagattctaccttggggactgctttgagtgccctatttatagaggtggacggctgtagagctgttgtaatggca 1622  T
Q  112 cacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatct 211  Q
    |||||||||||  | ||||  |||||||| || |||||||||| |||||| ||||||| |||||||| || |||| ||||| |||||||||||||  |||    
T  1621 cacctggctctagcagttataaaatcgtgagaagtgtaaccgccagagagtttattgcgggaacgtgtagagagatgttgtggttcgtttgaaccagtct 1522  T
Q  212 agctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggat 291  Q
       ||||||||||||  |||||||  |||||| | ||||||||||||||  | |||||||||| | |||| |||||||||    
T  1521 ctttcgctccgtgca--ccccttgtggggaagggatgtgtcgcaagtaacttcgccaaacgtggtgtttgggctttggat 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 307
Target Start/End: Complemental strand, 11042 - 10777
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||| ||||||||||| |   |||||| |||| |||| ||||||||||||| ||| |||||||||||||||||||  ||||||| ||||||||||| |||    
T  11042 ttctcccttggggactccattgagtccactatttataaaggtggagggctgtagagccgttgtaatggcacacctaactctgacggttacgaaatcatgg 10943  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || ||||||||||  | ||| ||||||| ||||| || |  |||||||||   ||| ||||||||| |||   ||| ||| ||||| ||||| ||| |||    
T  10942 gaagtgtaaccgcctgtgagtttattgcgggaacatggaaagagacgttgggtttcttttgaaccggtctctttcgttccttgcactcccctcgcatgga 10843  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagt 307  Q
    || |||||||||| |||||| |||||||||||| | |||| ||||||||| |||||| ||||||||    
T  10842 aggggtgtgtcgcgagtaattttgccaaacgtggtgtttgggctttggatggtattgggcctaagt 10777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 307
Target Start/End: Original strand, 14901 - 15172
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||||   ||||||||||| |||| ||||||| ||| ||||| |||||||||||||||||||  ||||||| |||||||||||||||    
T  14901 ttctaccttggggactgcattgagtcccctatttataaaggtggatggccgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgg 15000  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgca------ccccccttg 235  Q
    || ||||||| ||  | ||| ||||||| |||||||| |  |||||| ||  ||||||||||||||||||   ||| ||||||||      |||||||      
T  15001 gaagtgtaacagcctgtgagtttattgcgggaacgtggaaagagacgctggggttcgtttgaaccgatctctttcgttccgtgcacccccccccccctca 15100  T
Q  236 cagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagt 307  Q
    |  ||||| |||||||||| |||||| |||||||||||| | |||| ||||||||| ||| || ||||||||    
T  15101 cgtggaaggggtgtgtcgcgagtaattttgccaaacgtggtgtttgggctttggatagtactgggcctaagt 15172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 17116 - 17190
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacct 116  Q
    ||||||||||| ||||||   ||||||| ||| |||||||||||||||||||||| | |||||||||||||||||    
T  17116 ttctaccttggagactgcattgagtcccatatttatagaggtggagggctgcagagctgttgtaatggcacacct 17190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 17204 - 17348
Alignment:
Q  163 ttattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaata 262  Q
    ||||||| |||||||| |  |||||||||  |||||||||||||  |||   ||| ||||||||||||||| ||  ||||| |||||||| | ||||||     
T  17204 ttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcacccccctcgcgtggaaggggtgtgtcacgagtaatt 17303  T
Q  263 ttgccaaacgtgctatttgtgctttggattgtattgagcctaagt 307  Q
    |||||||||||| | |||| | ||||||| ||| || ||||||||    
T  17304 ttgccaaacgtggtgtttgggatttggatggtactgggcctaagt 17348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 11 - 311
Target Start/End: Complemental strand, 36979 - 36681
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||| ||| |||| |||||||||| | | ||||||||| | ||||| ||||||||||||||||||||||||||  ||||| ||| |||||||||||||    
T  36979 cagagaatgagggtttagagggagag-tagattctaccttagagactgttaagagtcccctatatatagaggtgggtggctgtagagccgttgtaatggc 36881  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    |||| ||  || ||| |||||||||| |||||| |||||||| | | |||||   |||| ||||| |||   ||||||||| ||||||||||||| | ||    
T  36880 acacgtgtgtccgacggttacgaaattgtgggaagtgtaacctccaaagagagatttgcgggaacttgcgaagagacgttgcagttcgtttgaactgttc 36781  T
Q  211 tagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaa 310  Q
    | ||| |||| ||||| | |  | || |||||| ||||||| || |||||| |||||||||||| |||||| || |||||||||||||  |||||| |||    
T  36780 tcgcttgctctgtgcatctcgttcgcggggaaggggtgtgttgcgagtaatgttgccaaacgtggtatttgggc-ttggattgtattggacctaagaaaa 36682  T

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Target: scaffold0063; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 306
Target Start/End: Complemental strand, 49426 - 49133
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    |||||| ||| |||| |||||||||| | | ||||||||| ||||| | ||||||||||||||||||||||||||  || |||||| |||||||||||||    
T  49426 cagagaatgagggtttagagggagag-tagattctaccttagggacagttaagagtcccctatatatagaggtgggtggatgcagagccgttgtaatggc 49328  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatc 210  Q
    |||  ||  ||  |  ||||||||||||||||| |||||||||| |||||||   |  | |||| ||||   ||||||||| | ||| ||||||| ||||    
T  49327 acatgtgtgtccaatggttacgaaatcgtgggaagtgtaaccgc-agagagagattcacgggaaagtgcgaagagacgttgcaattcctttgaactgatc 49229  T
Q  211 tagctcgctccgtgcacccccctt-gcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaag 306  Q
    | ||| |||||||||||||||||| || |||||| ||||||| |  |||||| |||||||||||| ||||| ||  || |||||||||| |||||||    
T  49228 tcgcttgctccgtgcaccccccttcgcggggaaggggtgtgttgtgagtaatgttgccaaacgtggtattt-tggcttcgattgtattgggcctaag 49133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 42 - 291
Target Start/End: Complemental strand, 7519 - 7270
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    |||||||||||||| |||   ||||||||||| |||||||||||||||||||| | |||||||||||||||||||  ||||||| ||||||||||||| |    
T  7519 ttctaccttggggattgcattgagtcccctatttatagaggtggagggctgcaaagccgttgtaatggcacaccttactctgac-gttacgaaatcgttg 7421  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgca-ccccccttgcaggg 240  Q
    || ||||||| ||  | ||| ||||||| |||||||| |  |||||||||  |||||||||||||  |||   ||| |||||||| ||||||| |   ||    
T  7420 gaagtgtaactgcctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcaccccccctcgtgtgg 7321  T
Q  241 aagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggat 291  Q
    | | |||||||||| |||||| ||||||||| || | |||| |||||||||    
T  7320 agggggtgtgtcgcgagtaattttgccaaacttggtgtttgggctttggat 7270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 311
Target Start/End: Complemental strand, 54770 - 54505
Alignment:
Q  45 taccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgggat 144  Q
    |||||| ||||||||   ||||||||||| |||||||||||||||||||| | |||||||||||| ||||||  ||||||| ||||||||||| |||||     
T  54770 tacctttgggactgcattgagtcccctatttatagaggtggagggctgcatagccgttgtaatggtacaccttactctgacggttacgaaatcatgggaa 54671  T
Q  145 gtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaaga 244  Q
    |||||||| |  | ||| ||||||| |||||||| || |||||||||   ||||||||||||  |||   ||| ||||||| ||||||| || | | ||     
T  54670 gtgtaaccacctgtgagtttattgcgggaacgtggagagagacgttgggtttcgtttgaaccagtctccttcgttccgtgcgcccccctcgc-gtggagg 54572  T
Q  245 ggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    |||||||| | |||||| ||||||||||||   |||| |||||| | ||||||| | ||||||||||    
T  54571 ggtgtgtctcgagtaattttgccaaacgtggattttgggctttgtagtgtattgggtctaagtaaat 54505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 298
Target Start/End: Complemental strand, 20454 - 20199
Alignment:
Q  42 ttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggcacacctggctctgactgttacgaaatcgtgg 141  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||| |||| ||| ||   | ||||| |||| ||||    
T  20454 ttctaccttggggactgttaagagtcccctatttttagaggtggagggctgcagagccgttgtaatggtacacttgggtcaagcggttacaaaattgtgg 20355  T
Q  142 gatgtgtaaccgctagagagattattgcaggaacgtgcagcgagacgttgtagttcgtttgaaccgatctagctcgctccgtgcaccccccttgcaggga 241  Q
    || |||||||||||||||| || ||||  ||| | ||  | ||||| || |   |||||| ||| | ||| ||| |||| | |||||||| | ||   ||    
T  20354 gaagtgtaaccgctagagaaataattgtgggagcatgttgagagacattatgactcgtttaaactggtctcgcttgctctgcgcacccccttcgcgatga 20255  T
Q  242 agaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattg 298  Q
    || |||||||| ||||||||||| ||||||||| |||||| | ||||||||||||||    
T  20254 aggggtgtgtcacaagtaatatttccaaacgtggtatttg-ggtttggattgtattg 20199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 98 - 311
Target Start/End: Original strand, 9226 - 9429
Alignment:
Q  98 ccgttgtaatggcacacctggctctgactgttacgaaatcgtgggatgtgtaa-ccgctagagagattattgcaggaacgtgcagcgagacgttgtagtt 196  Q
    ||||||||||||||||||||||       |||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||| |||    
T  9226 ccgttgtaatggcacacctggcg------gttacgaaattgtgggaagtgtaaaccgctagagagtttattgcaggaacgtgcagagagacgttgtggtt 9319  T
Q  197 cgtttgaaccgatctagctcgctccgtgcaccccccttgcagggaagaggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtat 296  Q
    ||||||||||  |    ||||||||||||| ||  || || || ||| ||||||||||||||||| |||||||||||| | |||| |||||| || ||||    
T  9320 cgtttgaaccagt----ctcgctccgtgca-cctgctcgcgggaaaggggtgtgtcgcaagtaattttgccaaacgtggtgtttgggctttgaatagtat 9414  T
Q  297 tgagcctaagtaaat 311  Q
    ||  || ||||||||    
T  9415 tggacccaagtaaat 9429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 19150 - 19261
Alignment:
Q  12 agagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggca 111  Q
    ||||||||| | || ||||| |||||| | ||||||||||||||||||   ||||||||||| |||||||||||||||||||||| || |||||| ||||    
T  19150 agagagtgaggatttagaggaagagatagattctaccttggggactgcagtgagtcccctatttatagaggtggagggctgcagagccattgtaacggca 19249  T
Q  112 cacctggctctg 123  Q
    ||||| ||||||    
T  19250 cacctagctctg 19261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 86563 - 86424
Alignment:
Q  11 cagagagtgatggttaagagggagagatcggttctaccttggggactgctaagagtcccctatatatagaggtggagggctgcagaaccgttgtaatggc 110  Q
    ||||||||||  ||| ||||| ||| || | ||||| ||| |||||||||| ||||||||||||||||||||||||||| |||| |  ||||||||||||    
T  86563 cagagagtgagagtttagaggaagaaatagattctatcttcgggactgctatgagtcccctatatatagaggtggagggttgcaaagtcgttgtaatggc 86464  T
Q  111 acacctggctctgactgttacgaaatcgtgggatgtgtaa 150  Q
    ||||  ||||||| |  |||||||||||||| | ||||||    
T  86463 acactaggctctggcgattacgaaatcgtggaaagtgtaa 86424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 44347 - 44308
Alignment:
Q  46 accttggggactgctaagagtcccctatatatagaggtgg 85  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  44347 accttggggactgctaagagtcccttttatatagaggtgg 44308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 1976 - 2042
Alignment:
Q  245 ggtgtgtcgcaagtaatattgccaaacgtgctatttgtgctttggattgtattgagcctaagtaaat 311  Q
    ||||||||||||||||| |||||||||||| | |||| |||||| || ||||||  || ||||||||    
T  1976 ggtgtgtcgcaagtaattttgccaaacgtggtgtttgggctttgaatagtattggacccaagtaaat 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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