View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13648_high_6 (Length: 333)
Name: NF13648_high_6
Description: NF13648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13648_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 13 - 285
Target Start/End: Original strand, 31788742 - 31789015
Alignment:
| Q |
13 |
tcttatgatagggtcggtgaaattgatttggattttgcaaatatctgacacgtgctaacgttgaatcgccacgtacaagtatacgtgttggtgtgtttta |
112 |
Q |
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| T |
31788742 |
tcttatgatagggtcggtgaaattgatttggattttgcaaatatctgacacgtgctaacgttgaatcgccacgtacaaggatacgtgttggtgtgtttta |
31788841 |
T |
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| Q |
113 |
tgaaaaaggaaagtgatgttgtcgttttgtgatttataagatgacacgtgc-ttgtgtgagcatgagagggtgtttatggaaagaagaacttgtgattgt |
211 |
Q |
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| T |
31788842 |
tgaaaaaggaaagtgatgttgtcgttttgtgatttataagatgacacgtgctttgtgcgagtatgagagggtgtttatgtaaagaagaacttgtgattgt |
31788941 |
T |
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| Q |
212 |
gaaagtgtaaaatggataaggcttcatttagttacacttgcttttttaggagtaaagctaatcatattatgact |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
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| T |
31788942 |
gaaagtgtaaaatggataaggcttcatttagttacacttgcttttttaggagtaaagctgaccatattatgact |
31789015 |
T |
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