View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13648_low_8 (Length: 284)

Name: NF13648_low_8
Description: NF13648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13648_low_8
NF13648_low_8
[»] chr6 (17 HSPs)
chr6 (158-269)||(3213482-3213594)
chr6 (159-269)||(21293584-21293695)
chr6 (158-269)||(7273241-7273353)
chr6 (158-269)||(21280011-21280123)
chr6 (157-269)||(7367631-7367744)
chr6 (161-269)||(13743130-13743239)
chr6 (161-269)||(13748630-13748739)
chr6 (166-269)||(9698247-9698351)
chr6 (158-269)||(26466881-26466993)
chr6 (164-269)||(7292829-7292935)
chr6 (160-269)||(30736064-30736174)
chr6 (157-269)||(26669914-26670027)
chr6 (160-269)||(24203895-24204005)
chr6 (161-269)||(30014425-30014534)
chr6 (159-217)||(33254049-33254107)
chr6 (158-222)||(27441672-27441736)
chr6 (160-222)||(33242533-33242595)
[»] chr1 (16 HSPs)
chr1 (159-269)||(2497469-2497580)
chr1 (160-269)||(5489858-5489968)
chr1 (160-269)||(48498870-48498980)
chr1 (161-269)||(37814860-37814969)
chr1 (160-269)||(43570994-43571104)
chr1 (157-269)||(7447907-7448020)
chr1 (158-269)||(24769405-24769517)
chr1 (159-269)||(4401410-4401521)
chr1 (157-267)||(750210-750321)
chr1 (159-269)||(50448167-50448278)
chr1 (159-269)||(4888125-4888235)
chr1 (160-269)||(23989431-23989541)
chr1 (156-222)||(26585592-26585658)
chr1 (160-222)||(35000021-35000083)
chr1 (156-222)||(44112807-44112873)
chr1 (157-222)||(35003424-35003489)
[»] chr5 (12 HSPs)
chr5 (159-269)||(5257077-5257188)
chr5 (160-269)||(41334571-41334681)
chr5 (158-269)||(7617215-7617327)
chr5 (166-269)||(38470661-38470765)
chr5 (160-269)||(18034064-18034174)
chr5 (166-269)||(2614563-2614667)
chr5 (155-264)||(39122259-39122369)
chr5 (158-257)||(25914902-25915002)
chr5 (159-269)||(33801551-33801662)
chr5 (185-269)||(22512387-22512472)
chr5 (160-218)||(30622627-30622685)
chr5 (161-222)||(32473303-32473364)
[»] chr4 (27 HSPs)
chr4 (160-269)||(27893750-27893860)
chr4 (160-269)||(35017814-35017924)
chr4 (157-269)||(1771171-1771284)
chr4 (158-269)||(27864646-27864758)
chr4 (159-269)||(23036062-23036173)
chr4 (159-269)||(31680984-31681095)
chr4 (156-269)||(27550391-27550505)
chr4 (157-269)||(55966251-55966364)
chr4 (158-269)||(28982728-28982840)
chr4 (155-269)||(43735824-43735939)
chr4 (160-269)||(25051775-25051885)
chr4 (160-267)||(51512173-51512281)
chr4 (160-269)||(23204686-23204796)
chr4 (178-269)||(39631183-39631275)
chr4 (163-269)||(48463361-48463468)
chr4 (160-269)||(33703223-33703333)
chr4 (166-269)||(12497038-12497142)
chr4 (160-269)||(43514594-43514704)
chr4 (160-269)||(43949709-43949819)
chr4 (165-269)||(41848053-41848158)
chr4 (213-269)||(46412430-46412487)
chr4 (157-222)||(46827611-46827676)
chr4 (159-222)||(19880084-19880147)
chr4 (159-217)||(3756159-3756217)
chr4 (160-222)||(48435487-48435549)
chr4 (160-222)||(55272284-55272346)
chr4 (156-217)||(32728492-32728553)
[»] chr8 (22 HSPs)
chr8 (157-269)||(20148842-20148955)
chr8 (160-269)||(3743853-3743963)
chr8 (164-269)||(29800862-29800968)
chr8 (159-269)||(36743390-36743501)
chr8 (161-269)||(26125717-26125825)
chr8 (161-269)||(42197344-42197453)
chr8 (166-269)||(29705444-29705548)
chr8 (160-269)||(2547078-2547188)
chr8 (160-269)||(9241634-9241744)
chr8 (166-269)||(11582848-11582952)
chr8 (166-267)||(2165877-2165979)
chr8 (157-269)||(1375624-1375737)
chr8 (158-269)||(30660648-30660760)
chr8 (160-269)||(31384746-31384856)
chr8 (157-269)||(30912467-30912580)
chr8 (159-269)||(45397398-45397508)
chr8 (160-222)||(10678060-10678122)
chr8 (160-269)||(40528542-40528652)
chr8 (191-269)||(5754985-5755064)
chr8 (160-269)||(42295277-42295386)
chr8 (164-217)||(16358745-16358798)
chr8 (158-222)||(34304918-34304981)
[»] chr7 (22 HSPs)
chr7 (166-270)||(32029731-32029836)
chr7 (157-269)||(44326260-44326373)
chr7 (164-269)||(5015477-5015583)
chr7 (160-269)||(10573831-10573941)
chr7 (156-269)||(16180261-16180375)
chr7 (166-269)||(27393174-27393278)
chr7 (158-269)||(45326102-45326214)
chr7 (159-269)||(44416841-44416952)
chr7 (160-269)||(26898310-26898420)
chr7 (160-269)||(43343532-43343642)
chr7 (157-269)||(5810829-5810942)
chr7 (153-269)||(24000913-24001030)
chr7 (157-269)||(47279629-47279742)
chr7 (166-269)||(42538345-42538449)
chr7 (160-269)||(41861758-41861868)
chr7 (157-269)||(35069803-35069916)
chr7 (178-269)||(38160505-38160597)
chr7 (166-269)||(42972934-42973038)
chr7 (157-222)||(31408538-31408603)
chr7 (166-269)||(9216383-9216487)
chr7 (159-222)||(40237049-40237112)
chr7 (158-222)||(27535137-27535201)
[»] chr3 (18 HSPs)
chr3 (159-269)||(46941135-46941246)
chr3 (158-269)||(54246054-54246166)
chr3 (155-269)||(36150212-36150327)
chr3 (160-269)||(24688310-24688420)
chr3 (160-269)||(40808947-40809057)
chr3 (156-269)||(42394323-42394437)
chr3 (159-269)||(52629910-52630021)
chr3 (160-269)||(45126836-45126946)
chr3 (160-269)||(54237178-54237288)
chr3 (160-269)||(53581766-53581876)
chr3 (157-269)||(47190931-47191044)
chr3 (160-269)||(40480831-40480941)
chr3 (159-269)||(25413763-25413874)
chr3 (168-269)||(42100770-42100872)
chr3 (158-257)||(1078312-1078412)
chr3 (160-196)||(27748710-27748746)
chr3 (160-222)||(9434254-9434316)
chr3 (156-217)||(29556863-29556924)
[»] chr2 (17 HSPs)
chr2 (158-269)||(30838714-30838826)
chr2 (3-86)||(31479423-31479506)
chr2 (156-269)||(19047239-19047353)
chr2 (159-269)||(4764633-4764744)
chr2 (157-267)||(43490306-43490417)
chr2 (161-269)||(42849768-42849876)
chr2 (160-269)||(43335671-43335781)
chr2 (166-269)||(12302167-12302271)
chr2 (155-269)||(1750496-1750611)
chr2 (160-269)||(16096829-16096940)
chr2 (159-228)||(39149201-39149269)
chr2 (157-222)||(34895646-34895711)
chr2 (157-217)||(18491840-18491900)
chr2 (160-222)||(966742-966804)
chr2 (160-222)||(11825562-11825624)
chr2 (157-222)||(6518399-6518464)
chr2 (157-222)||(41281879-41281944)
[»] scaffold0038 (1 HSPs)
scaffold0038 (156-269)||(112737-112851)
[»] scaffold0119 (1 HSPs)
scaffold0119 (157-269)||(767-880)
[»] scaffold0385 (1 HSPs)
scaffold0385 (160-269)||(11333-11443)
[»] scaffold0187 (2 HSPs)
scaffold0187 (160-269)||(14097-14206)
scaffold0187 (160-269)||(24425-24534)
[»] scaffold0157 (1 HSPs)
scaffold0157 (166-269)||(23335-23439)
[»] scaffold0003 (1 HSPs)
scaffold0003 (158-222)||(45625-45689)


Alignment Details
Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 3213594 - 3213482
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    |||||||||||||||||||||||||||||||| |||||| | |||| |||||||||||||||||| ||||| |||| || |||||||||||| |||||||    
T  3213594 aagagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggaccccacataaatagaagat 3213495  T
Q  257 aaagtgtggttgt 269  Q
    ||||| |||||||    
T  3213494 aaagtatggttgt 3213482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 21293584 - 21293695
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    ||||||||||||||||||||||| ||||||| |||||| | |||| |||||||||||||||||| ||||| |||| || |||||||||||| ||||||||    
T  21293584 agagtggtgatacatgtaccacctcatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggaccccacataaatagaagata 21293683  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  21293684 aagtgtggttgt 21293695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 7273241 - 7273353
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| |||| ||||||||||||||||||||||||||   |||| ||||||| |||||||||| ||||| ||| ||| |||||||||||| |||||||    
T  7273241 aagagtgatgatgcatgtaccaccccatgtggtaatacactctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagat 7273340  T
Q  257 aaagtgtggttgt 269  Q
    |||||||| ||||    
T  7273341 aaagtgtgattgt 7273353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 21280123 - 21280011
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| |||||||||||||||||||||||| |||| | | |||| ||||||| |||||||||| ||||| ||| ||| |||||||| ||| |||||||    
T  21280123 aagagtgatgatacatgtaccaccccatgtggcaatataccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 21280024  T
Q  257 aaagtgtggttgt 269  Q
    |||||||||||||    
T  21280023 aaagtgtggttgt 21280011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 7367744 - 7367631
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    ||||| || |||||||||||||||||||||||| |||||| | |||| ||||||| |||||||||| ||||| |||  || | |||||||||| |||| |    
T  7367744 aaagaatgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggatcccacataaatagaaaa 7367645  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  7367644 taaagtgtggttgt 7367631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 13743130 - 13743239
Alignment:
Q  161 agtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaa 259  Q
    |||||||||||||||||||||| |||||| |||| ||| |||| ||||||| || ||||||| ||||| |||  || |||||||| ||| ||||||||||    
T  13743130 agtggtgatacatgtaccaccctatgtggcaatatatcctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaa 13743229  T
Q  260 gtgtggttgt 269  Q
    ||||||||||    
T  13743230 gtgtggttgt 13743239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 13748630 - 13748739
Alignment:
Q  161 agtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaa 259  Q
    |||||||||||||||||||||| |||||| |||| ||| |||| ||||||| || ||||||| ||||| |||  || |||||||| ||| ||||||||||    
T  13748630 agtggtgatacatgtaccaccctatgtggcaatatatcctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaa 13748729  T
Q  260 gtgtggttgt 269  Q
    ||||||||||    
T  13748730 gtgtggttgt 13748739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 9698247 - 9698351
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||||||| ||||||| |||||| | |||| ||||| | |||||||||| ||||| |||| || |||||||| ||| |||||||||||||||    
T  9698247 tgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtg 9698346  T
Q  265 gttgt 269  Q
    |||||    
T  9698347 gttgt 9698351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 26466993 - 26466881
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| |||||||| |||||||| |||||| |||||| |||||| ||||| | ||||| |||||||||| |||  ||||||||| | ||| |||||||    
T  26466993 aagagtgatgatacatttaccaccctatgtggcaatacaccttttacacccatacaaaatcctgatacgtggcaacctgaaccccaaacaaatagaagat 26466894  T
Q  257 aaagtgtggttgt 269  Q
    |||||||||||||    
T  26466893 aaagtgtggttgt 26466881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 7292935 - 7292829
Alignment:
Q  164 ggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtg 262  Q
    |||||||||||||||||||||||||| |||||| | |||| || || | |||||||||| ||||| |||  || |||||||| ||| |||||||||||||    
T  7292935 ggtgatacatgtaccaccccatgtggcaatacaccctttacacacaaacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtg 7292836  T
Q  263 tggttgt 269  Q
    |||||||    
T  7292835 tggttgt 7292829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 30736174 - 30736064
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||| ||||||||| |||||| | |||| | ||||| |||||||||| ||||| |||  || |||||||||||| |||||||||    
T  30736174 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataa 30736075  T
Q  259 agtgtggttgt 269  Q
    |||||| ||||    
T  30736074 agtgtgattgt 30736064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 26669914 - 26670027
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||| ||||||| |||||||||| ||||||| |||||| | |||| ||||||| |||||||||| ||||| |||  || || ||||| ||| ||||||    
T  26669914 aaagagcggtgatatatgtaccacctcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaaga 26670013  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  26670014 taaagtgtggttgt 26670027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 24203895 - 24204005
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||||||||||||| |||||||  |||||| | |||| | ||||| |||||||||| ||||| ||| ||| |||||||| ||| |||| ||||    
T  24203895 gagtgatgatacatgtaccactccatgtgacaatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaatataa 24203994  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  24203995 agtgtggttgt 24204005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 30014534 - 30014425
Alignment:
Q  161 agtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaa 259  Q
    |||| ||||||||||| |||||||||||| |||||| | |||| | ||||| |||||||||| |||||  || ||| |||||| ||||| ||||||||||    
T  30014534 agtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggtaacttggaccccatataaatagaagataaa 30014435  T
Q  260 gtgtggttgt 269  Q
    || |||||||    
T  30014434 gtatggttgt 30014425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 33254107 - 33254049
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaat 217  Q
    |||||||||||||||||||  | |||||||| |||||| |||||||||||||| |||||    
T  33254107 agagtggtgatacatgtacacctccatgtggcaatacaccttttatacccacacaaaat 33254049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 27441736 - 27441672
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||||   ||||||||| |||||| || ||| ||||||||||||| ||||    
T  27441736 aagagtggtgatacatgtacacacccatgtggcaatacacctcttacacccacataaaatcctga 27441672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 33242595 - 33242533
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||  |||||||||| |||||| || ||| ||||||| ||||| ||||    
T  33242595 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctga 33242533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 2497469 - 2497580
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||||||||| |||||||||| || | |||||||||| ||| ||||    
T  2497469 agagtggtgatacatgtaccacaccatgtggcaatacaccctttatacccacataaaattctgacacgtgacaatctggatcccacataaatagatgata 2497568  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  2497569 aagtgtggttgt 2497580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 5489968 - 5489858
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||||||| |||||| | |||| |||||||||||||||||| ||||| ||| ||| |||||||| ||| |||||||||    
T  5489968 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataa 5489869  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  5489868 agtgtggttgt 5489858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 48498870 - 48498980
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||||||| |||||| | |||| |||||||||||||||||| ||||| ||| ||| |||||||| ||| |||||||||    
T  48498870 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataa 48498969  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  48498970 agtgtggttgt 48498980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 37814969 - 37814860
Alignment:
Q  161 agtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaa 259  Q
    ||||||||||||||||||||||||||||| |||||| | |||| | ||| |||||||||||| ||||| |||| || |||||||||||| ||||||||||    
T  37814969 agtggtgatacatgtaccaccccatgtggcaatacaccctttacatccatataaaattctgacacgtggcaatctggaccccacataaatagaagataaa 37814870  T
Q  260 gtgtggttgt 269  Q
    ||||||||||    
T  37814869 gtgtggttgt 37814860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 43570994 - 43571104
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||| |||||||||||||||||| |||||| | |||| |||||||||||||||||| ||||| ||| ||| |||||||| ||| |||||||||    
T  43570994 gagtgatgatatatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataa 43571093  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  43571094 agtgtggttgt 43571104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 7448020 - 7447907
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||| ||||||||||||||  |||||||| |||||| | |||| ||||||| |||||||||| ||||| ||| ||| |||||||| ||| ||||||    
T  7448020 aaagagtgatgatacatgtaccattccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaaga 7447921  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  7447920 taaagtgtggttgt 7447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 24769405 - 24769517
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| |||||||||||||||||||||||| ||||||   |||| | ||||| |||||||||| ||||| ||| ||| |||||||| ||| |||||||    
T  24769405 aagagtgatgatacatgtaccaccccatgtggcaatacactctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 24769504  T
Q  257 aaagtgtggttgt 269  Q
    |||||||||||||    
T  24769505 aaagtgtggttgt 24769517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 4401521 - 4401410
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| ||||||||||||||||| |||||| |||||| | |||| ||||||| |||||||||| ||||| ||  ||| |||||||| ||| ||||||||    
T  4401521 agagtgatgatacatgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcatattggaccccacacaaatagaagata 4401422  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  4401421 aagtgtggttgt 4401410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 750210 - 750321
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||| |||||||||||||| ||||||||| |||||| | |||| ||||||| |||||||||| |||||  ||  || |||||||| ||| ||||||    
T  750210 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggtaacatggaccccacacaaatagaaga 750309  T
Q  256 taaagtgtggtt 267  Q
    ||||||||||||    
T  750310 taaagtgtggtt 750321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 50448167 - 50448278
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| |||||||||||||||||||||||| |||||| | |||| ||||||| |||||||||| ||||| |||  || | |||||| ||| ||||||||    
T  50448167 agagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaacccacaaaaatagaagata 50448266  T
Q  258 aagtgtggttgt 269  Q
    || |||||||||    
T  50448267 aaatgtggttgt 50448278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 4888235 - 4888125
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| ||||||||||||||||| |||||| |||| ||| |||| | ||||| ||||||||||||| || ||||||| || ||||| ||| |||| |||    
T  4888235 agagtgatgatacatgtaccaccc-atgtggcaatatatcctttacatccacacaaaattctgatacatggcaatttggacaccacacaaatagaaaata 4888137  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  4888136 aagtgtggttgt 4888125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 23989431 - 23989541
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||||||||||||||||||||| || ||| |||||| | |||| ||||||| || ||||||| | ||| |||  || |||||||| ||| |||||||||    
T  23989431 gagtggtgatacatgtaccaccctatatggcaatacaccctttacacccacacaagattctgacatgtggcaacctggaccccacacaaatagaagataa 23989530  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  23989531 agtgtggttgt 23989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 26585658 - 26585592
Alignment:
Q  156 taaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||||||  ||||||| || ||||||||| ||| | ||||| ||||| ||||    
T  26585658 taaagagtggtgatacatgtacacccccatgcggcaatacatctcttacatccacacaaaatcctga 26585592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 35000021 - 35000083
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||  |||||||||| ||||||||| ||| ||||| | ||||| ||||    
T  35000021 gagtggtgatacatgtacacccccatgtggcaatacatctcttacacccatacaaaatcctga 35000083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 44112873 - 44112807
Alignment:
Q  156 taaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||||||  |  ||||||| |||||| || ||| ||||||| ||||||||||    
T  44112873 taaagagtggtgatacatgtacaccttcatgtggcaatacacctcttacacccacacaaaattctga 44112807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 35003489 - 35003424
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||| ||  |||||||||| |||||| || ||| ||||||| ||||| ||||    
T  35003489 aaagagtggtgatacatgcacacccccatgtggcaatacacctcttacacccacacaaaatcctga 35003424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 5257188 - 5257077
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    ||||||||||||||||||||||||||||||| |||||| | |||| |||||||||||||||||| | ||| |||| |  |||||||||||| ||||||||    
T  5257188 agagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagata 5257089  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  5257088 aagtgtggttgt 5257077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 41334571 - 41334681
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    |||||||||||||||||||||||||||||| |||||| | |||| ||||| | |||||||||| ||||| |||  || |||||||| ||| |||||||||    
T  41334571 gagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 41334670  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  41334671 agtgtggttgt 41334681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 7617327 - 7617215
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| ||||||||||| |||||||||||| |||||| |||||| ||| ||| |||||||||| | ||||||| ||  | |||||||||| |||||||    
T  7617327 aagagtgatgatacatgtatcaccccatgtggcaatacaccttttacaccaacacaaaattctgacatgtgacaacttagatcccacataaatagaagat 7617228  T
Q  257 aaagtgtggttgt 269  Q
    |||||||||||||    
T  7617227 aaagtgtggttgt 7617215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 38470765 - 38470661
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||||||| ||| ||| |||||| | |||| ||||||||||||||||||||||||  ||| || |||||||||||| |||||||||||||||    
T  38470765 tgatacatgtaccacctcatatggcaatacaccctttacacccacataaaattctgatacgtggtaatctggaccccacataaatagaagataaagtgtg 38470666  T
Q  265 gttgt 269  Q
     ||||    
T  38470665 attgt 38470661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 18034174 - 18034064
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||| ||| |||||| | |||| ||||| |||||||||||| ||||| |||  || |||||||| ||| |||||||||    
T  18034174 gagtgatgatacatgtaccaccccatatggcaatacaccctttacacccatataaaattctgacacgtggcaacctggaccccacacaaatagaagataa 18034075  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  18034074 agtgtggttgt 18034064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 2614563 - 2614667
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||||||| ||||||| |||||| | |||| ||||| | |||||||||| ||||| |||| || |||||||| ||| |||||||||||||||    
T  2614563 tgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtg 2614662  T
Q  265 gttgt 269  Q
    |||||    
T  2614663 gttgt 2614667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 39122259 - 39122369
Alignment:
Q  155 ttaaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaa 253  Q
    ||||||||||||||||||||||||||||||||||  |||| ||| |||| | ||||| || ||||||| | ||| |||  | ||||||||| ||| ||||    
T  39122259 ttaaagagtggtgatacatgtaccaccccatgtgacaatatatcatttacatccacacaagattctgacatgtggcaacctaaaccccacacaaatagaa 39122358  T
Q  254 gataaagtgtg 264  Q
    |||||||||||    
T  39122359 gataaagtgtg 39122369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 25914902 - 25915002
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| |||||||||||||||| ||||||| |||||| | |||| ||||||| |||||||||| ||||| |||  || |||||||| ||| |||||||    
T  25914902 aagagtgatgatacatgtaccacctcatgtggcaatacaccatttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 25915001  T
Q  257 a 257  Q
    |    
T  25915002 a 25915002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 33801662 - 33801551
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| ||||| |||||||  ||||||||| ||||||   |||| ||||||| |||||||||| ||||| ||| ||| | |||||| ||| ||||||||    
T  33801662 agagtgatgatatatgtaccttcccatgtggcaatacactctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaatagaagata 33801563  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  33801562 aagtgtggttgt 33801551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 22512472 - 22512387
Alignment:
Q  185 tgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtggttgt 269  Q
    ||||| |||||| | |||| | ||||| |||||||||| ||||| ||| ||| |||||||| ||| ||||||||||||||||||||    
T  22512472 tgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgt 22512387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 30622627 - 30622685
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaatt 218  Q
    ||||||||||||||||||  |||||||||| |||||| || ||| ||||||| ||||||    
T  30622627 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatt 30622685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 32473303 - 32473364
Alignment:
Q  161 agtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||  | |||||||| |||||| || ||| ||||||| ||||||||||    
T  32473303 agtggtgatacatgtacacctccatgtggcaatacacctcttacacccacacaaaattctga 32473364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 27893750 - 27893860
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    |||||||||||||||||||||||||||||| |||||| | |||| |||||||||||||||||| | ||| |||| |  |||||||||||| |||||||||    
T  27893750 gagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataa 27893849  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  27893850 agtgtggttgt 27893860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 35017924 - 35017814
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||| ||||| ||| ||| |||||||| ||| |||||||||    
T  35017924 gagtgatgatacatgtaccaccccatgtggcaatacatcttttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataa 35017825  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  35017824 agtgtggttgt 35017814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 1771171 - 1771284
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||| |||||||||||||||||||||||| |||||| | |||| ||||||| |||||||||| ||||| ||| ||| |||||||||||| ||||||    
T  1771171 aaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgagacgtggcaacttggaccccacataaatagaaga 1771270  T
Q  256 taaagtgtggttgt 269  Q
    |||| |||||||||    
T  1771271 taaaatgtggttgt 1771284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 27864758 - 27864646
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    |||||||||||||||||||||||||||||||| |||||| | |||| | |||||||||||||||| | |||  ||| ||||||||||||||| |||| ||    
T  27864758 aagagtggtgatacatgtaccaccccatgtggcaatacaccctttacatccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaat 27864659  T
Q  257 aaagtgtggttgt 269  Q
    |||||||||||||    
T  27864658 aaagtgtggttgt 27864646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 23036173 - 23036062
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| |||||||||||||||||||||||| || ||||| |||| ||||||| |||||||||| ||||| |||  || |||||||||||| ||||||||    
T  23036173 agagtgatgatacatgtaccaccccatgtggcaacacatcctttacacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagata 23036074  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  23036073 aagtgtggttgt 23036062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 31681095 - 31680984
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||||||||||||||| || ||||||||| |||||| | |||| ||| |||||||||||||| ||||| |||| | ||||||||||||| ||||||||    
T  31681095 agagtggtgatacatgtagcatcccatgtggcaatacaccctttacacctacataaaattctgacacgtggcaatctaaaccccacataaatagaagata 31680996  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  31680995 aagtgtggttgt 31680984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 27550505 - 27550391
Alignment:
Q  156 taaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaag 254  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||| ||||| | |||||||||| ||||| |||  || |||||||||||| |||||    
T  27550505 taaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacataaatagaag 27550406  T
Q  255 ataaagtgtggttgt 269  Q
    |||||||||||||||    
T  27550405 ataaagtgtggttgt 27550391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 55966251 - 55966364
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||||||||||||||||||| |||||||| |||||| | |||| |||||||||||||||||| | ||| |||| |  |||||||||||| ||||||    
T  55966251 aaagagtggtgatacatgtaccactccatgtggcaatacaccctttacacccacataaaattctgacaggtggcaatctagaccccacataaatagaaga 55966350  T
Q  256 taaagtgtggttgt 269  Q
    |||| |||||||||    
T  55966351 taaattgtggttgt 55966364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 28982728 - 28982840
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||| | ||||| |||||||||| ||||| ||| ||| |||||||| ||| |||||||    
T  28982728 aagagtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 28982827  T
Q  257 aaagtgtggttgt 269  Q
    |||||| ||||||    
T  28982828 aaagtgcggttgt 28982840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 43735939 - 43735824
Alignment:
Q  155 ttaaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaa 253  Q
    |||||||||| ||||||||||||||||||| |||| |||||| | |||| | |||||||||||||||| ||||||||| ||| | |||||| ||| ||||    
T  43735939 ttaaagagtgatgatacatgtaccaccccacgtggcaatacaccctttacatccacataaaattctgacacgtgacaacttggatcccacacaaatagaa 43735840  T
Q  254 gataaagtgtggttgt 269  Q
    ||||||||||| ||||    
T  43735839 gataaagtgtgattgt 43735824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 25051885 - 25051775
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||||||||||||||||| |||| |||||||| |||| | ||||| |||||||||| ||||| ||| ||| |||||||||||| |||||||||    
T  25051885 gagtgatgatacatgtaccaccccacgtggcaatacatcatttacatccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataa 25051786  T
Q  259 agtgtggttgt 269  Q
    |||||| ||||    
T  25051785 agtgtgattgt 25051775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 51512173 - 51512281
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||||| ||||| |||  || |||||||| ||| | |||||||    
T  51512173 gagtgatgatacatgtaccaccccacgtggcaatacatctttaatacccacacaaaattctgacacgtggcaacctggaccccacacaaataaaagataa 51512272  T
Q  259 agtgtggtt 267  Q
    |||||||||    
T  51512273 agtgtggtt 51512281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 23204686 - 23204796
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||||| |||||| ||||||||| |||| ||| |||| |||||||||||||||||| | ||| |||  || |||||||||||| |||||||||    
T  23204686 gagtgatgatacacgtaccatcccatgtggcaatatatcctttacacccacataaaattctgacatgtggcaacctggaccccacataaatagaagataa 23204785  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  23204786 agtgtggttgt 23204796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 269
Target Start/End: Complemental strand, 39631275 - 39631183
Alignment:
Q  178 caccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtggttgt 269  Q
    |||||||||||  |||||||| |||| ||||||| |||||||||| ||||||||  |||||||||||| ||| ||||||||||||||||||||    
T  39631275 caccccatgtgacaatacatcctttacacccacacaaaattctgacacgtgacatattgaaccccacacaaatagaagataaagtgtggttgt 39631183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 269
Target Start/End: Original strand, 48463361 - 48463468
Alignment:
Q  163 tggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagt 261  Q
    |||||||||||||||||| | |||||| |||||| | |||| |||||||||||||||||| | |||  ||| ||||||||||||||| |||| |||||||    
T  48463361 tggtgatacatgtaccactctatgtggcaatacaccctttacacccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaataaagt 48463460  T
Q  262 gtggttgt 269  Q
     |||||||    
T  48463461 atggttgt 48463468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 33703333 - 33703223
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||| ||| |||||| | |||| ||||||| |||||||||| ||||| ||| ||| | ||| || ||| |||||||||    
T  33703333 gagtgatgatacatgtaccaccccatatggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccgcacaaatagaagataa 33703234  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  33703233 agtgtggttgt 33703223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 12497142 - 12497038
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    ||||||||| |||||||||||||  ||||||  ||||| ||||||| |||||||| | ||||| ||| ||||||| |||| ||| |||||||||||||||    
T  12497142 tgatacatgcaccaccccatgtgacaatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataaagtgtg 12497043  T
Q  265 gttgt 269  Q
     ||||    
T  12497042 attgt 12497038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 43514594 - 43514704
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||||||| ||||||   |||| | ||||| |||||||||| ||||| |||  |  |||||||| ||| |||||||||    
T  43514594 gagtgatgatacatgtaccaccccatgtggcaatacactctttacatccacaaaaaattctgacacgtggcaacctagaccccacacaaatagaagataa 43514693  T
Q  259 agtgtggttgt 269  Q
     ||||||||||    
T  43514694 ggtgtggttgt 43514704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 43949709 - 43949819
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||||||||||||||| || ||| |||||| | |||||||||| | |||||||||| ||||| ||  ||| | ||| || ||| |||||||||    
T  43949709 gagtgatgatacatgtaccaccctatttggcaatacaccctttatacccatacaaaattctgacacgtggcatattggatcccgcacaaatagaagataa 43949808  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  43949809 agtgtggttgt 43949819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 41848158 - 41848053
Alignment:
Q  165 gtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgt 263  Q
    |||||||||||||  |||||||||| |||||| |  ||| | ||||  |||||||||| | |||||||| ||||||||||| ||| |||||| |||||||    
T  41848158 gtgatacatgtacacccccatgtggcaatacaccccttacatccacgcaaaattctgacatgtgacaatctgaaccccacacaaatagaagagaaagtgt 41848059  T
Q  264 ggttgt 269  Q
    ||||||    
T  41848058 ggttgt 41848053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 46412430 - 46412487
Alignment:
Q  213 aaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtggttgt 269  Q
    |||||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||||    
T  46412430 aaaattctgacacgtggcaatttaaaccccacataaatagaagataaagtgtggttgt 46412487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 46827611 - 46827676
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||||||  | |||||||| ||||||||| ||| ||||||| ||||| ||||    
T  46827611 aaagagtggtgatacatgtacacctccatgtggaaatacatctcttacacccacacaaaatcctga 46827676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 19880147 - 19880084
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||||  |||||||||| |||||| || ||| ||||||| ||||| ||||    
T  19880147 agagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctga 19880084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 3756159 - 3756217
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaat 217  Q
    |||||||||||||||||||   ||||||||| |||||| || ||| |||||||||||||    
T  3756159 agagtggtgatacatgtacactcccatgtggcaatacaactcttacacccacataaaat 3756217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 48435487 - 48435549
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||  |||||||||  ||||||||| ||| ||||||| ||||| ||||    
T  48435487 gagtggtgatacatgtacacccccatgtgacaatacatctcttacacccacacaaaatcctga 48435549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 55272284 - 55272346
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||  |||||||||| |||||| || ||| ||||||| ||||| ||||    
T  55272284 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctga 55272346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 32728553 - 32728492
Alignment:
Q  156 taaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaat 217  Q
    ||||||||||||||||||||||  |||||||||| |||||| || ||| || |||| |||||    
T  32728553 taaagagtggtgatacatgtacacccccatgtggcaatacacctcttacacgcacaaaaaat 32728492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 8e-27; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 20148955 - 20148842
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||||||||||||||||||| |||||||| |||||| | |||| |||||||||||||||||| ||||| |||| || | |||||||||| ||| ||    
T  20148955 aaagagtggtgatacatgtaccacaccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatga 20148856  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  20148855 taaagtgtggttgt 20148842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 3743963 - 3743853
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||| |||||||||||||||| | |||||| | |||| |||||||||||||||||| ||||| |||| ||||||| ||||||| |||||||||    
T  3743963 gagtgatgatatatgtaccaccccatgtagcaatacaccctttacacccacataaaattctgacacgtggcaatctgaaccctacataaatagaagataa 3743864  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  3743863 agtgtggttgt 3743853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 29800862 - 29800968
Alignment:
Q  164 ggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtg 262  Q
    |||||||||||||||||||||||||| |||||| | |||| |||||||||||||||||| | ||| |||| |  |||||||||||| |||||||||||||    
T  29800862 ggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataaagtg 29800961  T
Q  263 tggttgt 269  Q
    |||||||    
T  29800962 tggttgt 29800968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 36743390 - 36743501
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| |||||||||||||||||||||||| |||||| | |||| ||||| | |||||||||| ||||| |||| || |||||||| ||| ||||||||    
T  36743390 agagtgatgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagata 36743489  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  36743490 aagtgtggttgt 36743501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 26125825 - 26125717
Alignment:
Q  161 agtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaa 259  Q
    |||||||||| |||||||||||||||||| |||||| | |||| |||| ||||||||||||| ||||| |||| || | |||||||||| ||||||||||    
T  26125825 agtggtgatatatgtaccaccccatgtggcaatacaccctttacacccgcataaaattctgacacgtggcaatctgga-cccacataaatagaagataaa 26125727  T
Q  260 gtgtggttgt 269  Q
    ||||||||||    
T  26125726 gtgtggttgt 26125717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 42197344 - 42197453
Alignment:
Q  161 agtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaa 259  Q
    |||| |||||||||||||||||||||||| |||||| | |||| ||||||| |||||| ||| ||||| |||| || |||||||| ||| ||||||||||    
T  42197344 agtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaa 42197443  T
Q  260 gtgtggttgt 269  Q
    ||||||||||    
T  42197444 gtgtggttgt 42197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 29705548 - 29705444
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||||||||||||||| |||||| | |||| ||||||| |||||||||| ||||| ||| ||| ||||| || ||| |||||||||||||||    
T  29705548 tgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccgcacaaatagaagataaagtgtg 29705449  T
Q  265 gttgt 269  Q
    |||||    
T  29705448 gttgt 29705444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 2547188 - 2547078
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||||||||||||||| |||||| |||||| | |||| ||||||| |||||||||| ||||| ||| ||| | |||||| ||| |||||||||    
T  2547188 gagtgatgatacatgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaatagaagataa 2547089  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  2547088 agtgtggttgt 2547078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 9241744 - 9241634
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||||||| || ||| | |||  ||||||| |||||||||| ||||| |||  || |||||||||||| |||||||||    
T  9241744 gagtgatgatacatgtaccaccccatgtggcaacacaccctttgcacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataa 9241645  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  9241644 agtgtggttgt 9241634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 11582952 - 11582848
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||||||| ||||||| |||||| | |||| ||||| | |||||||||| ||||| |||| || |||||||| ||| |||||||||||||||    
T  11582952 tgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtg 11582853  T
Q  265 gttgt 269  Q
    |||||    
T  11582852 gttgt 11582848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 2165877 - 2165979
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||||| ||||||||  |||||| | |||| ||||||| |||||||||| ||||| |||  ||||||||||| ||| |||||||||||||||    
T  2165877 tgatacatgtaccatcccatgtgacaatacaccctttacacccacacaaaattctgacacgtggcaacctgaaccccacacaaatagaagataaagtgtg 2165976  T
Q  265 gtt 267  Q
    |||    
T  2165977 gtt 2165979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 1375737 - 1375624
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||||||||||||||||||||| |||||  |||||||  |||| ||||||| || ||||| | ||||| |||| ||||| ||||| ||| ||||||    
T  1375737 aaagagtggtgatacatgtaccaccctatgtgacaatacattctttacacccacacaagattctaacacgtggcaatctgaactccacacaaatagaaga 1375638  T
Q  256 taaagtgtggttgt 269  Q
    |||||||| |||||    
T  1375637 taaagtgtagttgt 1375624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 30660648 - 30660760
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| ||||||||||| || || |||||| |||||| | |||| | |||||||||||||||| ||||| |||  || |||||||| ||| |||||||    
T  30660648 aagagtgatgatacatgtatcatcctatgtggcaatacaccctttacatccacataaaattctgacacgtggcaacctggaccccacacaaatagaagat 30660747  T
Q  257 aaagtgtggttgt 269  Q
    |||||||||||||    
T  30660748 aaagtgtggttgt 30660760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 31384856 - 31384746
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||| |||||||||||||||||| |||| | | |||| | |||||||||||||||| ||||  |||  || |||||||| ||| |||||||||    
T  31384856 gagtgatgatatatgtaccaccccatgtggcaatataccctttacatccacataaaattctgacacgtagcaacctggaccccacacaaatagaagataa 31384757  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  31384756 agtgtggttgt 31384746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 30912467 - 30912580
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||| |||||||||||||||||||||||| ||||||   |||| ||||||| |||||||||| ||||| |||  |  |||||||| ||| ||||||    
T  30912467 aaagagtgatgatacatgtaccaccccatgtggcaatacactctttacacccacacaaaattctgacacgtggcaacctagaccccacacaaatagaaga 30912566  T
Q  256 taaagtgtggttgt 269  Q
    ||| ||| ||||||    
T  30912567 taaggtgcggttgt 30912580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 45397508 - 45397398
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| |||||||||||||| ||||||||| || ||| | |||| ||||||| |||||||||| ||||| |||| || | |||||| ||| ||||||||    
T  45397508 agagtgatgatacatgtacca-cccatgtggcaacacaccctttacacccacacaaaattctgacacgtggcaatctggagcccacacaaatagaagata 45397410  T
Q  258 aagtgtggttgt 269  Q
    || |||||||||    
T  45397409 aattgtggttgt 45397398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 10678060 - 10678122
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||  |||||||||| ||||||||| ||| ||||||| ||||| ||||    
T  10678060 gagtggtgatacatgtacacccccatgtggcaatacatctcttacacccacacaaaatcctga 10678122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 40528542 - 40528652
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    |||||||||||||||| |  || ||||||  |||| ||| |||| | ||||| |||||| ||| | ||||||| |||||||||||| ||| |||||| ||    
T  40528542 gagtggtgatacatgtgcaccctcatgtgacaatatatcatttacatccacacaaaattatgacatgtgacaacttgaaccccacacaaatagaagagaa 40528641  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  40528642 agtgtggttgt 40528652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 5755064 - 5754985
Alignment:
Q  191 aatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtggttgt 269  Q
    |||||| | |||| ||||||| |||||||| | ||||| ||| ||| | |||||||||| ||||||||||||||||||||    
T  5755064 aatacaccctttacacccacacaaaattctaacacgtggcaacttggatcccacataaatagaagataaagtgtggttgt 5754985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 42295386 - 42295277
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||| |||||||| || |||||| |||| | | |||| | ||||| |||||||||| | ||| ||| ||| |||| ||||||| |||||||||    
T  42295386 gagtgatgataaatgtaccatcctatgtggcaatataccctttacatccacacaaaattctgacatgtggcaacttggaccc-acataaatagaagataa 42295288  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  42295287 agtgtggttgt 42295277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 16358745 - 16358798
Alignment:
Q  164 ggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaat 217  Q
    ||||||||||||||  |||||| ||| |||||| || |||||||||||||||||    
T  16358745 ggtgatacatgtacacccccatatggcaatacacctcttatacccacataaaat 16358798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 34304981 - 34304918
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||| ||||| | ||||| ||||    
T  34304981 aagagtggtgatacatgta-caccccatgtggcaatacacctcttacacccaaacaaaatcctga 34304918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 8e-27; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 32029731 - 32029836
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||||||||||||||| |||||| | |||| ||||||| |||||||||| ||||| ||| ||| |||||||||||| |||||||||||||||    
T  32029731 tgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtg 32029830  T
Q  265 gttgtt 270  Q
    ||||||    
T  32029831 gttgtt 32029836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 44326373 - 44326260
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||||||||||||||||||| |||||||| |||||| | |||| |||||||||||||||||| ||||| |||| || | |||||||||| ||| ||    
T  44326373 aaagagtggtgatacatgtaccacaccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatga 44326274  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  44326273 taaagtgtggttgt 44326260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 164 - 269
Target Start/End: Complemental strand, 5015583 - 5015477
Alignment:
Q  164 ggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtg 262  Q
    |||||||||||||||||||||||||| |||||| |||||| || |||| |||||||||| ||||| ||| ||| |||||||| ||| |||||||||||||    
T  5015583 ggtgatacatgtaccaccccatgtggcaatacaccttttacactcacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtg 5015484  T
Q  263 tggttgt 269  Q
    |||||||    
T  5015483 tggttgt 5015477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 10573941 - 10573831
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    |||||||||||||||||||||| ||||||  |||| ||| |||| |||||||||||||||||||| ||| |||| |  |||||||||||| |||||||||    
T  10573941 gagtggtgatacatgtaccaccgcatgtgacaatatatcctttacacccacataaaattctgatatgtggcaatcttgaccccacataaatagaagataa 10573842  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  10573841 agtgtggttgt 10573831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 269
Target Start/End: Original strand, 16180261 - 16180375
Alignment:
Q  156 taaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaag 254  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||||| | ||||| |||||||||| ||||| |||  || |||||||| ||| |||||    
T  16180261 taaagagtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaag 16180360  T
Q  255 ataaagtgtggttgt 269  Q
    |||||||||||||||    
T  16180361 ataaagtgtggttgt 16180375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 27393174 - 27393278
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| | | | |||  || |||||||||||| |||||||||||||||    
T  27393174 tgatacatgtaccaccccatgtggcaatacatcctttacacccacataaaattctgacatgaggcaacctggaccccacataaatagaagataaagtgtg 27393273  T
Q  265 gttgt 269  Q
    |||||    
T  27393274 gttgt 27393278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 45326214 - 45326102
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    |||||||||||||||||||||||||||||||  |||||| | |||| |||||||||||||||||| | |||  | | || |||||||||||| |||||||    
T  45326214 aagagtggtgatacatgtaccaccccatgtgacaatacaccatttacacccacataaaattctgacaggtggtagtctggaccccacataaatagaagat 45326115  T
Q  257 aaagtgtggttgt 269  Q
    |||||||| ||||    
T  45326114 aaagtgtgattgt 45326102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 44416841 - 44416952
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| |||||||||||||||| ||||||| |||||| |||||| | ||||| ||| |||||| ||||| ||| ||| |||||||| ||| ||||||||    
T  44416841 agagtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagata 44416940  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  44416941 aagtgtggttgt 44416952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 26898310 - 26898420
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    |||||||||||||||||||| || |||||| |||||| |||||| |||||||||||||||||| |||||  ||  || |||||||| ||| |||| ||||    
T  26898310 gagtggtgatacatgtaccatcctatgtggcaatacaccttttacacccacataaaattctgacacgtggtaacctggaccccacacaaatagaatataa 26898409  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  26898410 agtgtggttgt 26898420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 43343532 - 43343642
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||| ||||||| |||||| |||||| | ||||| ||| |||||| ||||| ||| ||| |||||||| ||| |||||||||    
T  43343532 gagtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagataa 43343631  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  43343632 agtgtggttgt 43343642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 5810829 - 5810942
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||| |||||||||||||||||||||||| |||||| | |||| ||||| | |||||| ||| | ||| ||| ||| |||||||| ||| ||||||    
T  5810829 aaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacatgtggcaacttggaccccacacaaatagaaga 5810928  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  5810929 taaagtgtggttgt 5810942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 269
Target Start/End: Original strand, 24000913 - 24001030
Alignment:
Q  153 agttaaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-ag 251  Q
    ||||| |||||  |||||||||||||||| ||||||| |||||| | |||| ||||| | |||||||||| ||||| |||| || |||||||| ||| ||    
T  24000913 agttatagagtaatgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatag 24001012  T
Q  252 aagataaagtgtggttgt 269  Q
    ||||||||||||||||||    
T  24001013 aagataaagtgtggttgt 24001030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 47279629 - 47279742
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    ||||||||||||||||||||||| ||||| ||  |||||| | ||||||||||||||||||||||||| |||  ||| || | || | ||||| ||||||    
T  47279629 aaagagtggtgatacatgtaccatcccatctgacaatacaccctttatacccacataaaattctgatatgtggtaatctggatcctatataaatagaaga 47279728  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  47279729 taaagtgtggttgt 47279742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 42538345 - 42538449
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||||||| ||||||| |||||| | |||| ||||| | |||||||||| ||||| |||| || |||||||| ||| |||||||||||||||    
T  42538345 tgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataaagtgtg 42538444  T
Q  265 gttgt 269  Q
    |||||    
T  42538445 gttgt 42538449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 41861868 - 41861758
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| ||||| | |||||||||| ||||| |||  || |||||| | ||| |||||||||    
T  41861868 gagtggtgatacatgtaccactccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccatacaaatagaagataa 41861769  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  41861768 agtgtggttgt 41861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 35069916 - 35069803
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||| |||||||||||||| || |||||| |||| ||| |||| | | ||| |||||||||| ||||| ||| ||| ||| |||||||| ||||||    
T  35069916 aaagagtgatgatacatgtaccatcctatgtggcaatatatcctttacatctacacaaaattctgacacgtggcaacttggacctcacataaatagaaga 35069817  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  35069816 taaagtgtggttgt 35069803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 269
Target Start/End: Original strand, 38160505 - 38160597
Alignment:
Q  178 caccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtggttgt 269  Q
    |||||||||||| |||||| |  ||| ||||||| |||||||||| ||||| ||| ||| |||||||||||| |||||||||||||| |||||    
T  38160505 caccccatgtggcaatacaccccttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtagttgt 38160597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 42973038 - 42972934
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    |||||||||||| | || |||||| |||||| | |||| ||||||| |||||||||| ||||| ||| ||| |||||||| ||| |||||||||| ||||    
T  42973038 tgatacatgtactatcctatgtggcaatacaccatttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaaatgtg 42972939  T
Q  265 gttgt 269  Q
    |||||    
T  42972938 gttgt 42972934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 31408538 - 31408603
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||||||  |||||||||  |||||| || ||| ||||||||||||| ||||    
T  31408538 aaagagtggtgatacatgtacacccccatgtgacaatacacctcttacacccacataaaatcctga 31408603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 9216487 - 9216383
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    ||||| || ||||||||||||||  |||||| |||||| | ||||| |||||||||| | | | ||| || ||||||||| ||| |||||||||| ||||    
T  9216487 tgatatatataccaccccatgtgacaatacaccttttacatccacacaaaattctgacatgcggcaacttaaaccccacacaaatagaagataaaatgtg 9216388  T
Q  265 gttgt 269  Q
    |||||    
T  9216387 gttgt 9216383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 40237112 - 40237049
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||||  |||||||||| |||||| || ||| ||||||| ||||| ||||    
T  40237112 agagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctga 40237049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 27535137 - 27535201
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||||   | |||||||| ||||||||| ||| | ||||| ||||||||||    
T  27535137 aagagtggtgatacatgtattcctccatgtggcaatacatctcttacatccacacaaaattctga 27535201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 46941246 - 46941135
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| |||||||||||||||||||||||| ||||||   |||| |||||||||||||||||| ||||| ||| ||| |||||||| ||| ||||||||    
T  46941246 agagtgatgatacatgtaccaccccatgtggcaatacactctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagata 46941147  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  46941146 aagtgtggttgt 46941135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 54246054 - 54246166
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| |||||||||||||||||||||||| |||||||  |||| |||||||||||||||||| | ||| |||  || |||||||| ||| |||||||    
T  54246054 aagagtgatgatacatgtaccaccccatgtggcaatacattctttacacccacataaaattctgacatgtggcaacctggaccccacacaaatagaagat 54246153  T
Q  257 aaagtgtggttgt 269  Q
    |||||||||||||    
T  54246154 aaagtgtggttgt 54246166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 36150327 - 36150212
Alignment:
Q  155 ttaaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaa 253  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||| | ||||| |||||||||| ||||| |||  || || ||||| ||| ||||    
T  36150327 ttaaagagtggtgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggactccacacaaatagaa 36150228  T
Q  254 gataaagtgtggttgt 269  Q
    ||||||||||||||||    
T  36150227 gataaagtgtggttgt 36150212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 24688310 - 24688420
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||||||| |||||| | ||||  |||||| |||||||||| ||||| |||  || |||||||||||| |||||||||    
T  24688310 gagtgatgatacatgtaccaccccatgtggcaatacaccatttacccccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataa 24688409  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  24688410 agtgtggttgt 24688420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 40809057 - 40808947
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||||||| |||||| |||||| | ||||| |||||||||| ||||| |||  || |||||||| ||| |||||||||    
T  40809057 gagtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 40808958  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  40808957 agtgtggttgt 40808947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 269
Target Start/End: Original strand, 42394323 - 42394437
Alignment:
Q  156 taaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaag 254  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||| ||||| | |||||| ||| ||||| |||| || |||||||| ||| |||||    
T  42394323 taaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaag 42394422  T
Q  255 ataaagtgtggttgt 269  Q
    |||||||||||||||    
T  42394423 ataaagtgtggttgt 42394437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 52630021 - 52629910
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| |||||||||||||||||||||||| |||||| | |||| ||||||| |||||||||| ||||  |||  || |||| ||||||| ||||||||    
T  52630021 agagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtagcaacctggaccctacataaatagaagata 52629922  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  52629921 aagtgtggttgt 52629910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 45126836 - 45126946
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| |||||||||||||||||  | |||  ||| || |||||||||||| |||| ||||    
T  45126836 gagtggtgatacatgtaccactccatgtggcaatacaccctttacacccacataaaattctggcatgtggtaatctggaccccacataaatagaaaataa 45126935  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  45126936 agtgtggttgt 45126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 54237288 - 54237178
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||||||| |||||| | |||| ||||| | || ||||||| ||||| |||| || |||||||| ||| |||||||||    
T  54237288 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaatattctgacacgtggcaatctggaccccacacaaatagaagataa 54237189  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  54237188 agtgtggttgt 54237178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 53581766 - 53581876
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||| |||||||||| |||||| |||||| | |||| ||||||| |||||||||| ||||| |||  || |||||||| ||| |||||||||    
T  53581766 gagtgatgatacctgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 53581865  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  53581866 agtgtggttgt 53581876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 47190931 - 47191044
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||| ||||||||||||||  |||||||| |||||| | |||| ||||||| |||||||||| | |||  || ||| |||||||| ||| ||||||    
T  47190931 aaagagtgatgatacatgtaccattccatgtggcaatacaccctttacacccacacaaaattctgacatgtggtaacttggaccccacacaaatagaaga 47191030  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  47191031 taaagtgtggttgt 47191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 40480941 - 40480831
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| ||||||||||| ||||||||| || |||||| | |||| ||||||| |||||||||| ||||| |||  || |||| ||| ||| |||||||||    
T  40480941 gagtgatgatacatgtatcaccccatgcggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggaccctacacaaatagaagataa 40480842  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  40480841 agtgtggttgt 40480831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 269
Target Start/End: Complemental strand, 25413874 - 25413763
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| |||||||||||||||||||| ||  |||||| | |||| ||||||| |||| ||||| |||||  ||  || |||||||| ||| ||||||||    
T  25413874 agagtgatgatacatgtaccaccccatatgacaatacaccctttacacccacacaaaactctgacacgtggtaacctggaccccacacaaatagaagata 25413775  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  25413774 aagtgtggttgt 25413763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 42100872 - 42100770
Alignment:
Q  168 atacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtggt 266  Q
    |||||||||||||| ||||||| ||| || | |||| |||||||||||||||||| ||||| |||  ||||| ||||| ||| | |||||||| ||||||    
T  42100872 atacatgtaccacctcatgtggcaatgcaccctttacacccacataaaattctgacacgtggcaacctgaactccacacaaataaaagataaaatgtggt 42100773  T
Q  267 tgt 269  Q
    |||    
T  42100772 tgt 42100770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 1078412 - 1078312
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| |||||||||||||||| ||||||| |||||| | |||| | ||||| |||||||||| ||||| |||  ||||| ||||| ||| |||||||    
T  1078412 aagagtgatgatacatgtaccacctcatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctgaactccacacaaatagaagat 1078313  T
Q  257 a 257  Q
    |    
T  1078312 a 1078312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 27748746 - 27748710
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaataca 196  Q
    |||||||||||||||||||||||||||||| ||||||    
T  27748746 gagtggtgatacatgtaccaccccatgtggcaataca 27748710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 9434316 - 9434254
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||   ||||||||| |||||| || ||| ||||||| ||||||||||    
T  9434316 gagtggtgatacatgtacactcccatgtggcaatacacctcttacacccacacaaaattctga 9434254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 29556863 - 29556924
Alignment:
Q  156 taaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaat 217  Q
    |||||||||||||||||||||||||  ||||||| ||||||   |||| ||||| |||||||    
T  29556863 taaagagtggtgatacatgtaccactacatgtggcaatacacaatttacacccatataaaat 29556924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 30838826 - 30838714
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagat 256  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||| ||| ||| |||||||||| ||||| |||  || |||||||| ||| |||||||    
T  30838826 aagagtgatgatacatgtaccaccccatgtggcaatacaccttttacacctacacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 30838727  T
Q  257 aaagtgtggttgt 269  Q
    |||||||||||||    
T  30838726 aaagtgtggttgt 30838714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 31479423 - 31479506
Alignment:
Q  3 aaagtttgttcataaaaatatgtatgcatgtcttcatttaaattgaaggttttagtgttttggtacttggtagttttccattct 86  Q
    ||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  31479423 aaagtctgttcatagaaatatggttgcatgtcttcatttaaattgaaggttttagtgttttggtactcagtagttttcgattct 31479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 19047353 - 19047239
Alignment:
Q  156 taaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaag 254  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||| ||||| | |||||| ||| ||||| |||| || |||||||| ||| |||||    
T  19047353 taaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaag 19047254  T
Q  255 ataaagtgtggttgt 269  Q
    |||||||||||||||    
T  19047253 ataaagtgtggttgt 19047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 4764633 - 4764744
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagata 257  Q
    |||||| |||||||||||||||| ||||||| |||||| |||||| | ||||| |||||||||| ||||| |||  || |||||||| ||| ||||||||    
T  4764633 agagtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 4764732  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  4764733 aagtgtggttgt 4764744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 43490306 - 43490417
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||||| || ||||||||||||| ||||||| |||||| | |||| ||||| | |||||||||| ||||| |||| || |||||||||||| ||||||    
T  43490306 aaagagtgatgctacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacataaatagaaga 43490405  T
Q  256 taaagtgtggtt 267  Q
    ||||||||||||    
T  43490406 taaagtgtggtt 43490417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 42849768 - 42849876
Alignment:
Q  161 agtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaa 259  Q
    |||| |||||||||||||||||||||||| |||||| | |||| ||||||| |||||||||| ||||| ||| ||| |||||||| ||| |||| |||||    
T  42849768 agtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaa-ataaa 42849866  T
Q  260 gtgtggttgt 269  Q
    ||||||||||    
T  42849867 gtgtggttgt 42849876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 43335671 - 43335781
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataa 258  Q
    ||||| |||||||||||||||||||||||| |||| | |||||| | ||||| |||||||||| ||||| |||  || | |||||||||| |||||||||    
T  43335671 gagtgatgatacatgtaccaccccatgtggcaatataccttttacatccacacaaaattctgacacgtggcaacctggatcccacataaatagaagataa 43335770  T
Q  259 agtgtggttgt 269  Q
    ||||| |||||    
T  43335771 agtgtagttgt 43335781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 12302167 - 12302271
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    ||||||||||| |||||||||||| |||||||| |||| | ||||| |||||||||| || ||  ||  || |||||||||||| |||||||||||||||    
T  12302167 tgatacatgtatcaccccatgtggcaatacatcctttacatccacacaaaattctgacacatggtaacctggaccccacataaatagaagataaagtgtg 12302266  T
Q  265 gttgt 269  Q
    |||||    
T  12302267 gttgt 12302271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 269
Target Start/End: Complemental strand, 1750611 - 1750496
Alignment:
Q  155 ttaaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaa 253  Q
    |||| ||||| |||||  ||||||||||||||||| || ||| | |||| || |||| |||||||||| ||||| |||| || |||||||| ||| ||||    
T  1750611 ttaaggagtgatgatatttgtaccaccccatgtggcaacacaccctttacactcacacaaaattctgacacgtggcaatctggaccccacacaaatagaa 1750512  T
Q  254 gataaagtgtggttgt 269  Q
    ||||||||||||||||    
T  1750511 gataaagtgtggttgt 1750496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 16096940 - 16096829
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaa-tttgaaccccacataa-aagaagata 257  Q
    ||||| |||||||||||||||  ||||||| |||||| | |||| ||||||| |||||||||| ||||| ||| || || ||||||||||  ||||||||    
T  16096940 gagtgatgatacatgtaccacatcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttagacccccacataagtagaagata 16096841  T
Q  258 aagtgtggttgt 269  Q
    ||||||||||||    
T  16096840 aagtgtggttgt 16096829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 39149201 - 39149269
Alignment:
Q  159 agagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtg 228  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||| ||||||| |||||| ||| |||||    
T  39149201 agagtgatgatacatgtaccaccc-atgtggtaatacaccttttacacccacacaaaattatgagacgtg 39149269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 34895646 - 34895711
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||||||  |||||||||| |||||| || ||| ||||||| ||||| ||||    
T  34895646 aaagagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctga 34895711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 18491900 - 18491840
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaat 217  Q
    |||||||||||||||||||||  |||||||||| |||||| || ||| ||||||| |||||    
T  18491900 aaagagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaat 18491840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 966742 - 966804
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||  |||||||||| |||||| || ||| ||||||| ||||| ||||    
T  966742 gagtggtgatacatgtacatccccatgtggaaatacacctcttacacccacacaaaatcctga 966804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 11825562 - 11825624
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||  |||||||||| |||||| || ||| ||||||| ||||| ||||    
T  11825562 gagtggtgatacatgtacatccccatgtggcaatacacctcttacacccacacaaaatcctga 11825624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 6518399 - 6518464
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||||||  | |||||||  |||||| |||||| ||||||| ||||| ||||    
T  6518399 aaagagtggtgatacatgtacacctccatgtgtcaatacaccttttacacccacacaaaatcctga 6518464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 41281879 - 41281944
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    |||||||||||||||||||||  |||||| ||| |||||| || ||| ||||||| ||||| ||||    
T  41281879 aaagagtggtgatacatgtacacccccatatggcaatacacctcttacacccacacaaaatcctga 41281944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 112851 - 112737
Alignment:
Q  156 taaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaag 254  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||| ||||| | |||||| ||| ||||| |||| || |||||||| ||| |||||    
T  112851 taaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaag 112752  T
Q  255 ataaagtgtggttgt 269  Q
    |||||||||||||||    
T  112751 ataaagtgtggttgt 112737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 880 - 767
Alignment:
Q  157 aaagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaaga 255  Q
    |||||| ||||||| |||||||||| ||||||| |||||| | |||| ||||||| |||||||||| ||||| |||  || || ||||| ||| ||||||    
T  880 aaagagcggtgatatatgtaccacctcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaaga 781  T
Q  256 taaagtgtggttgt 269  Q
    ||||||||||||||    
T  780 taaagtgtggttgt 767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 11443 - 11333
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacat-aaaagaagataa 258  Q
    ||||| |||||||||||||| ||||||||| ||||||   |||| ||| ||| |||||||||| ||||  ||| ||| ||||||||| || |||||||||    
T  11443 gagtgatgatacatgtaccatcccatgtggcaatacactatttacacctacacaaaattctgacacgtagcaacttggaccccacatcaatagaagataa 11344  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  11343 agtgtggttgt 11333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 14097 - 14206
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccc-cacataaaagaagataa 258  Q
    ||||| |||||||||||||||||||||||| |||||| | |||| | ||||| |||||||||| ||||| |||  || |||| |||| || |||||||||    
T  14097 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggacccacaca-aatagaagataa 14195  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  14196 agtgtggttgt 14206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 24425 - 24534
Alignment:
Q  160 gagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccc-cacataaaagaagataa 258  Q
    ||||| |||||||||||||||||||||||| |||||| | |||| | ||||| |||||||||| ||||| |||  || |||| |||| || |||||||||    
T  24425 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggacccacaca-aatagaagataa 24523  T
Q  259 agtgtggttgt 269  Q
    |||||||||||    
T  24524 agtgtggttgt 24534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 23335 - 23439
Alignment:
Q  166 tgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctgatacgtgacaatttgaaccccacataaa-agaagataaagtgtg 264  Q
    ||||||||| |||||||||||||  ||||||  ||||| ||||||| |||||||| | ||||| ||| ||||||| |||| ||| |||||||||||||||    
T  23335 tgatacatgcaccaccccatgtgacaatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataaagtgtg 23434  T
Q  265 gttgt 269  Q
     ||||    
T  23435 attgt 23439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 45625 - 45689
Alignment:
Q  158 aagagtggtgatacatgtaccaccccatgtggtaatacatcttttatacccacataaaattctga 222  Q
    ||||||||||||||||||||   ||||||||| |||||| || ||| ||||||||||||| ||||    
T  45625 aagagtggtgatacatgtacacacccatgtggcaatacacctcttacacccacataaaatcctga 45689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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