View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1364_low_39 (Length: 325)
Name: NF1364_low_39
Description: NF1364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1364_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 30 - 313
Target Start/End: Complemental strand, 26574961 - 26574674
Alignment:
| Q |
30 |
aacagttacattaaaattcccgcacaatagaggccagaatcaacgaaataaactctcttttgaatgtgtaatacaaaaagtatagacaccttttgaagtt |
129 |
Q |
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| T |
26574961 |
aacaattacattaaaattcccgcacaatagaggccagaatcaacgaaataaactcccttttgaatgtgtaatataaaaagtatagacaccttttgaagtt |
26574862 |
T |
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| Q |
130 |
aatgaagtattacaaaaacaaagagcaatcaccctttaaaatacatagaatacataaagtgtcatgacatagacaattcaattttcacatctaaaaaatt |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
26574861 |
aatgaagtattacaaaaacaaagagcaatcaccctttaaaatacatagaatacataaagtgtcataacatagacaattcaattttcacatctaaaaaatt |
26574762 |
T |
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| Q |
230 |
tctgacatcatt----aaaatttatttcttgaaatatcgccggtcacctggaatctcttttattcaaattagattttgattagatatt |
313 |
Q |
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||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
26574761 |
tctgacatcatattaaaaaaattatttcttgaaatatcgccggtcacctggaatctcttttattcaaattaaattttgattagatatt |
26574674 |
T |
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