View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1364_low_81 (Length: 240)
Name: NF1364_low_81
Description: NF1364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1364_low_81 |
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Alignment Details
Target: chr6 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 63 - 221
Target Start/End: Original strand, 1061092 - 1061252
Alignment:
| Q |
63 |
gtgacatggattcttcatattataatttggaatttgaaatttatacatacgtacgtacaataaagaccaagaaagttgagaaaaatggccctacgtgtac |
162 |
Q |
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| T |
1061092 |
gtgacatgcattcttcatattataatttggaatttgaaatttatacatatgtacgtacaataaagaccaaaaaagttgagaaaaatggccctacgtgtac |
1061191 |
T |
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| Q |
163 |
cctacaccacactcacatagtctc--atgtcacatgctgtgccgtataatgtttagtttat |
221 |
Q |
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|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
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| T |
1061192 |
cctacaccacactcacatagtcacatatgtcacatgctgtgccgtataatgtttagtttat |
1061252 |
T |
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