View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1365-INSERTION-2 (Length: 281)
Name: NF1365-INSERTION-2
Description: NF1365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1365-INSERTION-2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 281
Target Start/End: Complemental strand, 5077067 - 5076792
Alignment:
| Q |
6 |
caatcgccacccaaacaacatctcatcttgatggattcattagtaatcctgatataaagtccacaacaatactacctcgttttcaaagaggtgtctttga |
105 |
Q |
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||||| |||| ||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
5077067 |
caatcaccactcaaacaacatctcattttgatggattcattggtaatcctgacataaagtccacaacaatactacctcattttcaaagaggtgtctttga |
5076968 |
T |
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| Q |
106 |
tggttgcaacattctcggggattttttaattcctttcattgatttatgacaagtcaaacacacatacataatttctgctacattcttcttcattttaagc |
205 |
Q |
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|||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
5076967 |
tggttgtaacattctcgaggattttttaattcctttctttgatttatgacaagtcaaacacacatacataatttctactacattcttcttcattttaagc |
5076868 |
T |
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| Q |
206 |
caccaaaacatcttctaattttaacatatatcggtagctctaagatgaatactcaacttacttttatgtcattctt |
281 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |
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| T |
5076867 |
caccaaaacatcttctaattctaacatatatcggtagctctaggatgaatactcaacttacttctatgtcattctt |
5076792 |
T |
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