View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13650_high_3 (Length: 400)
Name: NF13650_high_3
Description: NF13650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13650_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 1 - 388
Target Start/End: Original strand, 33791152 - 33791539
Alignment:
| Q |
1 |
cgtgatggattagtatcaactgttaatgatgtacatcttccagggccagaatcctcaatttctcaaacattacaagcttttaaatccaaaggtatgacat |
100 |
Q |
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| T |
33791152 |
cgtgatggattagtatcaactgttaatgatgtacatcttccagggccagaatcctcaatttctcaaacattacaagcttttaaatccaaaggtatgacat |
33791251 |
T |
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| Q |
101 |
tggaagaaatggttacacttttaggagcacacactgttggatttgctcattgtagtttcattggaaaaagacttggtagtaatgatagttcaatggaccc |
200 |
Q |
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| T |
33791252 |
tggaagaaatggttacacttttaggagcacacactgttggatttgctcattgtagtttcattggaaaaagacttggtagtaatgatagttcaatggaccc |
33791351 |
T |
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| Q |
201 |
taatttaaggaaaacgttggttcaatggtgtggtgttgaaggtaaggatccattggtgtttttggatcaaaacacttcttttgtgtttgatcatcaattt |
300 |
Q |
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| T |
33791352 |
taatttaagaaaaaggttggttcaatggtgtggtgttgaaggtaaggatccattagtgtttttggatcaaaacacttcttttgtttttgatcatcaattt |
33791451 |
T |
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| Q |
301 |
tataatcagattttgttggggagaggtgtgttaacaattgaccagaatttggctctagattccatttccaaaggggttgtcacaggtt |
388 |
Q |
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| T |
33791452 |
tataatcagattttgttggggagaggtgtgttaacaattgaccagaatttggctctagattccatttccaaaggggttgtcacaggtt |
33791539 |
T |
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