View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13650_low_6 (Length: 331)
Name: NF13650_low_6
Description: NF13650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13650_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 18 - 321
Target Start/End: Complemental strand, 35162391 - 35162088
Alignment:
| Q |
18 |
gaaatgtgcaaaacagaaacaaacataaactcaatcaagttacctgcaaagctttcaaataaatcttccgcctccggagattaatcatagtcagtgaaat |
117 |
Q |
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| T |
35162391 |
gaaatgtgcaaaacagaaacaaacataaactcaatcaagttacctgcaaagctttcaaataaatcttccgcctccggagattaatcatagtcagtgaaat |
35162292 |
T |
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| Q |
118 |
ctcctctctgctcaattctttcccatcttcaacccacttttccaaagccgtataaatagtaggcccggtaccattcataatagctttaaaaagttccgaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35162291 |
ctcctctctgctcaattctttcccatcttcaacccacttttccaaagccgtataaatagtaggcccggtaccattcataatagctttaaaaagttccgaa |
35162192 |
T |
|
| Q |
218 |
tcagccctctttctactcgacctcttccccgttgaaacctcatccacatcatgcgataacggtaactccagctcattatgtggccccgcaatttccgatt |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
35162191 |
tcagccctctttctactcgacctcttccccgttgaaacctcatccacatcatgcgataacggtaactccagctcattatgtggccccgtaatttccgatt |
35162092 |
T |
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| Q |
318 |
catc |
321 |
Q |
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|||| |
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| T |
35162091 |
catc |
35162088 |
T |
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