View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13653_high_10 (Length: 400)
Name: NF13653_high_10
Description: NF13653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13653_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 61 - 387
Target Start/End: Complemental strand, 46093240 - 46092922
Alignment:
| Q |
61 |
attcgattttttattgctttacgtaagacaaggattgcataaaataatgggtagcacattggttggatatgaattaagtcaaatatactctttttt-gtg |
159 |
Q |
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| T |
46093240 |
attcgattttttattgctttacgtaagacaaggattgcataaaataatgggtagcacattggttggatatgaattaagtcaaatatactctttttttgtg |
46093141 |
T |
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| Q |
160 |
aaagatatgaagtcaaatatacttaataagtagtagtaatttgttttatgcatatataggatgtgttgtgtggcaaccacacgattgcgtgtggccaaag |
259 |
Q |
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| T |
46093140 |
aaagatatgaagtcaaatatacttaataagtagtagtaatttgttttatgcata----ggatgtgt-----ggcaaccacacgatagcgtgtggccaaag |
46093050 |
T |
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| Q |
260 |
gaatccacttatcctctcaatgatgctcctgtcgtcatacaacagctacatatatcgactatatggcccaactgtctgaattttgtttatactaattata |
359 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
46093049 |
gaatccacttatcctctcaatgatgctcctgtcgtcatacaacagctacatatatcgactatatggcccaagtgtctgaattttgtttatactaattata |
46092950 |
T |
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| Q |
360 |
tgctcctttcattgattcgtaaccagaa |
387 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
46092949 |
tgctcctttcattgattcgtaaccagaa |
46092922 |
T |
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