View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13655_high_3 (Length: 564)

Name: NF13655_high_3
Description: NF13655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13655_high_3
NF13655_high_3
[»] chr5 (29 HSPs)
chr5 (358-534)||(32891198-32891375)
chr5 (361-534)||(37093912-37094086)
chr5 (358-534)||(4391843-4392020)
chr5 (358-534)||(8692532-8692709)
chr5 (358-534)||(3456776-3456950)
chr5 (184-317)||(33338243-33338375)
chr5 (359-534)||(34286618-34286793)
chr5 (359-534)||(228047-228223)
chr5 (161-317)||(11680190-11680343)
chr5 (186-310)||(28273373-28273497)
chr5 (379-478)||(40925916-40926015)
chr5 (177-353)||(5108401-5108572)
chr5 (179-314)||(24397457-24397590)
chr5 (359-503)||(5481408-5481552)
chr5 (412-526)||(29223497-29223610)
chr5 (416-521)||(38614236-38614342)
chr5 (416-534)||(11739275-11739394)
chr5 (182-310)||(8213016-8213143)
chr5 (403-478)||(6614289-6614364)
chr5 (398-520)||(41326486-41326609)
chr5 (183-274)||(41530402-41530493)
chr5 (359-432)||(42148957-42149030)
chr5 (395-534)||(35672345-35672484)
chr5 (375-456)||(31644729-31644812)
chr5 (386-512)||(28434248-28434374)
chr5 (358-403)||(43141518-43141563)
chr5 (183-235)||(19804515-19804567)
chr5 (363-405)||(228027-228069)
chr5 (482-534)||(31644662-31644715)
[»] chr2 (32 HSPs)
chr2 (358-534)||(13686017-13686194)
chr2 (360-534)||(19898943-19899118)
chr2 (355-534)||(14940982-14941163)
chr2 (363-534)||(41464902-41465074)
chr2 (358-534)||(25414937-25415114)
chr2 (161-319)||(9991420-9991578)
chr2 (358-526)||(28429313-28429479)
chr2 (376-534)||(3810285-3810444)
chr2 (360-534)||(42263855-42264030)
chr2 (357-534)||(45093146-45093320)
chr2 (359-478)||(28716316-28716435)
chr2 (184-313)||(41464262-41464391)
chr2 (359-534)||(35323474-35323650)
chr2 (358-534)||(35676269-35676452)
chr2 (180-316)||(32354728-32354864)
chr2 (161-315)||(6084681-6084836)
chr2 (209-315)||(3095067-3095173)
chr2 (213-318)||(36402436-36402541)
chr2 (178-303)||(40356405-40356529)
chr2 (355-486)||(36690814-36690946)
chr2 (417-534)||(29689277-29689392)
chr2 (185-258)||(18904248-18904321)
chr2 (419-534)||(2752692-2752808)
chr2 (359-534)||(16058375-16058548)
chr2 (359-404)||(2752614-2752659)
chr2 (380-456)||(40126520-40126596)
chr2 (185-235)||(5711181-5711231)
chr2 (359-400)||(24413862-24413903)
chr2 (363-405)||(13685997-13686039)
chr2 (458-531)||(28716437-28716511)
chr2 (450-534)||(23454350-23454436)
chr2 (160-237)||(39085771-39085848)
[»] chr3 (27 HSPs)
chr3 (359-534)||(521763-521939)
chr3 (358-534)||(23642977-23643154)
chr3 (358-534)||(36517538-36517715)
chr3 (361-534)||(45166250-45166424)
chr3 (358-534)||(31788329-31788506)
chr3 (358-534)||(50612872-50613049)
chr3 (361-526)||(38176390-38176556)
chr3 (388-534)||(1561283-1561430)
chr3 (179-316)||(38611332-38611469)
chr3 (358-526)||(39145283-39145452)
chr3 (161-309)||(46055753-46055901)
chr3 (359-534)||(52546766-52546942)
chr3 (199-313)||(38014655-38014769)
chr3 (376-534)||(20912191-20912350)
chr3 (359-526)||(34624486-34624643)
chr3 (187-303)||(36473310-36473426)
chr3 (358-520)||(51297021-51297186)
chr3 (185-317)||(20499306-20499437)
chr3 (179-272)||(52313461-52313553)
chr3 (415-478)||(22650450-22650513)
chr3 (415-521)||(9496567-9496674)
chr3 (185-281)||(21195283-21195379)
chr3 (258-310)||(24980126-24980178)
chr3 (184-304)||(32734503-32734623)
chr3 (363-405)||(50613027-50613069)
chr3 (464-500)||(29011343-29011379)
chr3 (438-478)||(38169329-38169369)
[»] chr4 (32 HSPs)
chr4 (360-534)||(37674000-37674175)
chr4 (359-534)||(41633241-41633416)
chr4 (360-534)||(24683100-24683275)
chr4 (358-534)||(18375389-18375565)
chr4 (161-321)||(16559974-16560136)
chr4 (359-501)||(54358170-54358312)
chr4 (179-319)||(31463291-31463431)
chr4 (181-318)||(54400182-54400317)
chr4 (165-319)||(19934449-19934603)
chr4 (359-534)||(23348112-23348291)
chr4 (358-478)||(17847540-17847660)
chr4 (179-319)||(22665653-22665793)
chr4 (358-500)||(4512160-4512303)
chr4 (360-483)||(41878592-41878715)
chr4 (183-319)||(51581458-51581595)
chr4 (186-318)||(27628837-27628969)
chr4 (186-314)||(2804325-2804451)
chr4 (388-534)||(26179238-26179385)
chr4 (186-286)||(33894078-33894178)
chr4 (359-512)||(47838942-47839094)
chr4 (182-310)||(26805681-26805809)
chr4 (359-506)||(54021241-54021391)
chr4 (416-534)||(47281588-47281711)
chr4 (183-280)||(29533537-29533632)
chr4 (250-314)||(49482972-49483036)
chr4 (359-442)||(41497890-41497975)
chr4 (187-307)||(54357728-54357848)
chr4 (357-401)||(52726030-52726074)
chr4 (186-283)||(7031615-7031710)
chr4 (361-394)||(47282226-47282259)
chr4 (363-405)||(24683080-24683122)
chr4 (474-534)||(41878345-41878406)
[»] chr1 (41 HSPs)
chr1 (358-534)||(1270195-1270372)
chr1 (355-534)||(34475923-34476103)
chr1 (357-526)||(31032694-31032864)
chr1 (368-534)||(29095530-29095697)
chr1 (179-318)||(48033873-48034012)
chr1 (358-526)||(16254886-16255055)
chr1 (360-512)||(47550838-47550990)
chr1 (362-534)||(9098571-9098741)
chr1 (158-319)||(39873293-39873455)
chr1 (358-534)||(20808971-20809148)
chr1 (184-319)||(2351223-2351358)
chr1 (184-315)||(4551040-4551171)
chr1 (183-317)||(37275260-37275394)
chr1 (358-534)||(45010224-45010400)
chr1 (159-304)||(38680882-38681027)
chr1 (358-534)||(42480145-42480324)
chr1 (183-310)||(30111750-30111877)
chr1 (186-320)||(3077048-3077182)
chr1 (419-534)||(24135779-24135893)
chr1 (183-329)||(15177023-15177169)
chr1 (374-503)||(2958710-2958834)
chr1 (161-298)||(12482354-12482490)
chr1 (359-512)||(44714807-44714960)
chr1 (161-317)||(26060163-26060322)
chr1 (358-466)||(4624438-4624539)
chr1 (361-534)||(34807960-34808134)
chr1 (362-430)||(41647356-41647424)
chr1 (192-276)||(32512083-32512167)
chr1 (183-330)||(8903930-8904075)
chr1 (185-298)||(4081205-4081318)
chr1 (186-314)||(21029295-21029421)
chr1 (246-317)||(16109874-16109945)
chr1 (405-500)||(27143603-27143698)
chr1 (434-534)||(4194790-4194891)
chr1 (247-310)||(46065316-46065379)
chr1 (363-405)||(1270175-1270217)
chr1 (363-405)||(4194770-4194812)
chr1 (363-405)||(20808951-20808993)
chr1 (363-405)||(34475903-34475945)
chr1 (474-525)||(41646608-41646660)
chr1 (159-234)||(52396498-52396574)
[»] chr7 (18 HSPs)
chr7 (356-534)||(23991946-23992125)
chr7 (184-319)||(39321141-39321278)
chr7 (160-315)||(3408166-3408321)
chr7 (182-319)||(16492022-16492159)
chr7 (161-316)||(44207609-44207765)
chr7 (380-534)||(27425773-27425928)
chr7 (180-320)||(10980913-10981053)
chr7 (396-534)||(17611866-17612005)
chr7 (182-319)||(36856516-36856653)
chr7 (179-310)||(45174491-45174622)
chr7 (358-499)||(42195437-42195578)
chr7 (416-534)||(22326882-22327001)
chr7 (161-295)||(675089-675222)
chr7 (179-310)||(35729427-35729560)
chr7 (358-500)||(8307584-8307724)
chr7 (186-314)||(5787235-5787363)
chr7 (359-512)||(25686412-25686563)
chr7 (191-271)||(24620778-24620858)
[»] chr8 (30 HSPs)
chr8 (359-534)||(36473048-36473224)
chr8 (359-534)||(41322553-41322729)
chr8 (359-486)||(15561913-15562040)
chr8 (178-314)||(36054979-36055115)
chr8 (359-534)||(39112672-39112848)
chr8 (358-534)||(29314023-29314200)
chr8 (361-534)||(11653712-11653889)
chr8 (179-314)||(10635965-10636100)
chr8 (182-317)||(24286469-24286604)
chr8 (355-461)||(33888946-33889052)
chr8 (185-315)||(44159316-44159446)
chr8 (358-526)||(2001680-2001848)
chr8 (182-319)||(40451881-40452018)
chr8 (358-534)||(34392132-34392300)
chr8 (190-310)||(31452052-31452171)
chr8 (412-534)||(4851757-4851880)
chr8 (359-439)||(37919508-37919588)
chr8 (358-512)||(1005636-1005793)
chr8 (423-534)||(8551513-8551625)
chr8 (184-310)||(28280397-28280523)
chr8 (358-405)||(4824296-4824343)
chr8 (419-512)||(11643330-11643423)
chr8 (438-520)||(4794159-4794242)
chr8 (357-396)||(13357627-13357666)
chr8 (352-407)||(8551625-8551683)
chr8 (424-500)||(37919603-37919679)
chr8 (363-405)||(4851737-4851779)
chr8 (363-405)||(34392112-34392154)
chr8 (359-392)||(1416048-1416081)
chr8 (203-240)||(3744324-3744361)
[»] chr6 (11 HSPs)
chr6 (359-534)||(7646773-7646949)
chr6 (373-534)||(25935532-25935694)
chr6 (180-309)||(6614878-6615007)
chr6 (179-312)||(22616846-22616977)
chr6 (386-500)||(29487541-29487655)
chr6 (423-526)||(12607123-12607227)
chr6 (180-310)||(31765774-31765904)
chr6 (359-451)||(17366930-17367016)
chr6 (359-435)||(12607030-12607107)
chr6 (182-317)||(28541929-28542064)
chr6 (416-455)||(28898438-28898477)
[»] scaffold0002 (1 HSPs)
scaffold0002 (360-534)||(492690-492865)
[»] scaffold0132 (2 HSPs)
scaffold0132 (452-534)||(560-642)
scaffold0132 (452-534)||(8520-8602)
[»] scaffold0339 (1 HSPs)
scaffold0339 (358-409)||(13393-13443)


Alignment Details
Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 32891375 - 32891198
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  32891375 aggaaaatgctatttatctagaaaaatagcatcaacaatttttcaagacacagttgacaaattttaattgcatgatttatttgttcacttcctatctttt 32891276  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||| |||| ||||||||||||||| |||||||    
T  32891275 agccacacctccttgaattgtggcaaatagtgcattgtgattggctgctttttattcttgaagaattcttgatgttat 32891198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 361 - 534
Target Start/End: Original strand, 37093912 - 37094086
Alignment:
Q  361 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 460  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||     
T  37093912 aaaatgttatttttctagaaaaatagcatcaagaatttttcaagacacagttgacaagttttaattgcataatttatttgttcacttcctatttttcagt 37094011  T
Q  461 cacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||||||||||| |||||||||||| ||||||||  ||||||||| |||||||||||| || |||||||    
T  37094012 cacacctccttgaattgttgcaaatagtacaatgtgattgactgctctttattcttgaagaattgttgatgttat 37094086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 358 - 534
Target Start/End: Original strand, 4391843 - 4392020
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||| |||||||||||||     
T  4391843 aggaaaatgcaatttctctagaaaaatagcatcaagaatttttcaagacacagctggcaagttttaattgcataatttatttgttcacttcctatttttc 4391942  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||| ||||||||||||| ||||| ||| |||||| ||||| ||||||||| ||||||||||||||| |||||||    
T  4391943 agccacagctccttgaattgtggcaaacagtgcattgtaattggctgctctttattcttgaagaattcttgatgttat 4392020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 8692709 - 8692532
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||| || |||| ||||||||     
T  8692709 aggaaaatgttatttctctaaaaaaatagcatcaagaatctttcaagacacagctgacaaattttaattgcatgatttatttattcactttctatttttc 8692610  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
     ||||||| |||||||||||| |||||||||||||| ||||||| |||| |||| ||||||||||||||| |||||||    
T  8692609 tgccacacttccttgaattgtggcaaatagtacattatgattggatgctatttattcttgaagaattcttgatgttat 8692532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 3456950 - 3456776
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||||||||| |||||||||||||||||||||||||||   ||||||   |||||||||||||||||||||||||||||| |||||||||||||     
T  3456950 aggaaaatgctatttttctagaaaaatagcatcaagaattttt---gacacaaccgacaagttttaattgcatgatttatttgttcacttcctatttttc 3456854  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    || |||||||||||||||||| ||||||||| |||||||| ||  ||||||||| ||||||||||||| | |||||||    
T  3456853 agtcacacctccttgaattgtggcaaatagtgcattgtgagtgactgctctttattcttgaagaattcgtaatgttat 3456776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 33338243 - 33338375
Alignment:
Q  184 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 283  Q
    |||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  33338243 gcattggataaaggaataaaaatagatattttgt-ttggaaaatgataaaaagtagtcaagtcaacttataaaaagtttataaattgttgtttccaatgt 33338341  T
Q  284 aaagctgctaattttggttaccttaaccattgcc 317  Q
    ||| || |||||||||||||| ||||||||||||    
T  33338342 aaaactactaattttggttactttaaccattgcc 33338375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 359 - 534
Target Start/End: Complemental strand, 34286793 - 34286618
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||| ||||||||||||||||||||||||| | ||||||||||||||  |||||| |||||||||||||||||||||||| | ||||||||||| |    
T  34286793 ggaaaatgttatttctctagaaaaatagcatcaaaattttttcaagacacaactgacaaattttaattgcatgatttatttgttcatttcctatttttca 34286694  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttatcttgaagaattcttcatgttat 534  Q
    ||||||||| | | |||||| ||||||||| ||| |||||||| |||| ||  ||||||| |||| || |||||||    
T  34286693 gccacaccttcattaattgtggcaaatagtgcatcgtgattggctgcttttattcttgaataattattgatgttat 34286618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 359 - 534
Target Start/End: Complemental strand, 228223 - 228047
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||||||||| |||||||||||| ||| || | ||||||||||||||  | |||||||||||||||||||| |||||||| |||| ||| |||| |    
T  228223 ggaaaatgctatttttctagaaaaataacattaaaattttttcaagacacaacttacaagttttaattgcatgatatatttgttcactttctacttttca 228124  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    | |||||||||||||||||| | ||||||| ||||||||||| ||| |||||| ||||||| ||||||| |||||||    
T  228123 gtcacacctccttgaattgtggtaaatagtgcattgtgattgattgttctttattcttgaaaaattcttgatgttat 228047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 11680190 - 11680343
Alignment:
Q  161 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 260  Q
    |||||||||||| | |  ||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  11680190 aaatgctaaccattgcccttggggttttgaataaaggaacaaaaatagaaattttgtgttggaaaatgataaaagatagttaagtcaacttgtaaaaagt 11680289  T
Q  261 ttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgcc 317  Q
        ||||||||||||||| |||||||||  ||||||||||||| ||||||||||||    
T  11680290 ---caaattgttgtttccagtgtaaagctattaattttggttactttaaccattgcc 11680343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 186 - 310
Target Start/End: Original strand, 28273373 - 28273497
Alignment:
Q  186 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 285  Q
    |||| ||||||||||||||||| ||| |||||||| |||||||||||||||| |||||  |||||| ||| ||||||||||||||||||||||||| |||    
T  28273373 attgaataaaggaacaaaaatagaaactttgtgttagaaaatgataaaaagtggttaaatcaacttataacaagtttataaattgttgtttccaatataa 28273472  T
Q  286 agctgctaattttggttaccttaac 310  Q
    | || ||||||||||||||||||||    
T  28273473 aactactaattttggttaccttaac 28273497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 379 - 478
Target Start/End: Complemental strand, 40926015 - 40925916
Alignment:
Q  379 aaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgt 478  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  40926015 aaaagtagcatcaagaatttttcaagacacatctgacaagttttaattgtatgatttatttgttcacttcctatttttcagccacacctctttgaattgt 40925916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 177 - 353
Target Start/End: Original strand, 5108401 - 5108572
Alignment:
Q  177 ttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgttt 276  Q
    |||| ||| ||||||||||||||||||| || |  |||| ||||| ||||| ||||||||| || |||  || ||||||||| |||||||||||||||||    
T  5108401 tttttgggtattggataaaggaacaaaagta-attttttttgttgaaaaataataaaaagtggtcaagttaatttgtaaaaactttataaattgttgttt 5108499  T
Q  277 ccaatgtaaagctgctaattttggttaccttaaccattgccctcacggtaatgagggcaatggtaagcaagaccctt 353  Q
    |||||||||| ||||||||||||||||||||||  |||||||| | |||||    ||||||||| ||||||||||||    
T  5108500 ccaatgtaaaactgctaattttggttaccttaattattgccctgagggtaa----ggcaatggttagcaagaccctt 5108572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 24397590 - 24397457
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 278  Q
    ||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||||   | |||||||||||||||||||||||| |||||| |    
T  24397590 ttggggcattgaataaaggaacaaaa-ta-aaattttgtgttgaaaaatgataaaaagtagtcgcgtcaacttgtaaaaagtttataaattattgttttc 24397493  T
Q  279 aatgtaaagctgctaattttggttaccttaaccatt 314  Q
    ||| ||||||  |||||||||||||||||| |||||    
T  24397492 aatctaaagccactaattttggttaccttatccatt 24397457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 503
Target Start/End: Complemental strand, 5481552 - 5481408
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||| |||  || |||||| ||||||||||||||||| ||||  ||||||| |    
T  5481552 ggaaaatattatttctctagaaaaatagcatcaagaattttttaagacacagttggtaaattttaactgcatgatttatttgttcactttttatttttca 5481453  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggtt 503  Q
    |||||| |||  |||||||| ||||||| | |||||||| |||||    
T  5481452 gccacatctctatgaattgtggcaaataatgcattgtgaatggtt 5481408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 526
Target Start/End: Complemental strand, 29223610 - 29223497
Alignment:
Q  412 tgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta 511  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||| || |||||||||||||||||| ||||||||| ||||||| |||  ||||| |||    
T  29223610 tgacaagttttaattgcatgatttatttgtacacttcttatttttcagtcacacctccttgaattgtggcaaatagtgcattgtggttgactgctc-tta 29223512  T
Q  512 tcttgaagaattctt 526  Q
    | |||||||||||||    
T  29223511 ttttgaagaattctt 29223497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 416 - 521
Target Start/End: Original strand, 38614236 - 38614342
Alignment:
Q  416 aagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tct 514  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||| || |||||||||| |||| |||| ||||||||||||  |||||||| |||    
T  38614236 aagttttaattgcatgatttatttgtttacttcctatttttcagccacatcttcttgaattgtggcaattagtgcattgtgattgggcgctctttattct 38614335  T
Q  515 tgaagaa 521  Q
    |||||||    
T  38614336 tgaagaa 38614342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 416 - 534
Target Start/End: Original strand, 11739275 - 11739394
Alignment:
Q  416 aagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tct 514  Q
    ||||||||||||||| ||||||||||| || |||||||||| ||||||||||||||||||||| ||||| ||| |||| |||||   |||| |||| |||    
T  11739275 aagttttaattgcataatttatttgttcacctcctatttttcagccacacctccttgaattgtggcaaacagtgcattatgattacctgctttttattct 11739374  T
Q  515 tgaagaattcttcatgttat 534  Q
    |||||||||||| |||||||    
T  11739375 tgaagaattcttgatgttat 11739394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 310
Target Start/End: Original strand, 8213016 - 8213143
Alignment:
Q  182 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    |||||||  ||||| ||||||||||| ||||| | ||||| ||||||||||||| || | ||  |||||||||||| ||||||||||| |||||||  ||    
T  8213016 gggcattacataaaagaacaaaaataaaaattctatgttgaaaaatgataaaaaataatcaaatcaacttgtaaaa-gtttataaattattgtttctgat 8213114  T
Q  282 gtaaagctgctaattttggttaccttaac 310  Q
    |||||||| ||||||||||||||||||||    
T  8213115 gtaaagctactaattttggttaccttaac 8213143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 403 - 478
Target Start/End: Original strand, 6614289 - 6614364
Alignment:
Q  403 agacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgt 478  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  6614289 agacacagtcgacaagttttaattgcatgatttatttgttcacttcctatttttcaggcacacctccttgaattgt 6614364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 398 - 520
Target Start/End: Original strand, 41326486 - 41326609
Alignment:
Q  398 tttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtga 497  Q
    |||| ||| ||| ||| ||||| || |||||||  | |||||||| ||||||||||||| |||||||||||||||||||||  ||||||| |||||||||    
T  41326486 tttctagatacagttggcaagtgtttattgcatcgtgtatttgtttacttcctatttttcagccacacctccttgaattgtgtcaaatagcacattgtga 41326585  T
Q  498 ttggttgctcttta-tcttgaaga 520  Q
    |||| ||||||||| |||||||||    
T  41326586 ttggctgctctttattcttgaaga 41326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 41530493 - 41530402
Alignment:
Q  183 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgt 274  Q
    |||||||||||||||||  |||||| ||||||||||||| |||||||||||||   || ||| |||||| ||||||||||||||||||||||    
T  41530493 ggcattggataaaggaatgaaaatagaaattttgtgttgcaaaatgataaaaaacggtcaagtcaacttataaaaagtttataaattgttgt 41530402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 432
Target Start/End: Complemental strand, 42149030 - 42148957
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatga 432  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||  ||| || ||||||||||||||    
T  42149030 ggaaaacgctatttctctagaaaaatagtatcaagaatttttcaagacacaactgataaattttaattgcatga 42148957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 35672345 - 35672484
Alignment:
Q  395 atttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattg 494  Q
    |||||| |||||||| |||| || |||||||||||||||||||||||| |||||||||| |||| | |||  ||||| |||||    ||||||| |||||    
T  35672345 atttttgaagacacagttgataaattttaattgcatgatttatttgttcacttcctattgttta-caacatttccttaaattgcgataaatagtgcattg 35672443  T
Q  495 tgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||  ||||||||| ||||||| ||||||| |||||||    
T  35672444 tgattgactgctctttattcttgaaaaattcttaatgttat 35672484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 456
Target Start/End: Complemental strand, 31644812 - 31644729
Alignment:
Q  375 ctagaaaaatagcatcaagaatttttcaagacacat--ttgacaagttttaattgcatgatttatttgttgacttcctattttt 456  Q
    |||||||||||| |||||||||||| |||||||||   |||  |||||||||||||||| |||||||||| |||||||||||||    
T  31644812 ctagaaaaatagtatcaagaattttgcaagacacacaattggtaagttttaattgcatggtttatttgttcacttcctattttt 31644729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 386 - 512
Target Start/End: Complemental strand, 28434374 - 28434248
Alignment:
Q  386 gcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaat 485  Q
    |||||||||||||||  ||| ||| ||  | ||||||||||||||||||||||| || | || |||||||  || |||| || ||| |||||| | ||||    
T  28434374 gcatcaagaatttttttagatacagttagcgagttttaattgcatgatttatttattcattttctattttacagtcacatcttcttaaattgtggtaaat 28434275  T
Q  486 agtacattgtgattggttgctctttat 512  Q
    ||| |||||| ||||| ||||||||||    
T  28434274 agtgcattgtaattggctgctctttat 28434248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 403
Target Start/End: Original strand, 43141518 - 43141563
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaa 403  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||    
T  43141518 aggaaaatgttatttctctagaaaaatagcatcaagaattcttcaa 43141563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 19804515 - 19804567
Alignment:
Q  183 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaa 235  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||    
T  19804515 ggcattgaataaaggaacaaaaatagaaattttgtgttgaaaagtgataaaaa 19804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 228027 - 228069
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||| ||| |||||||||||||| |||||||||||||||||||    
T  228027 aatgatatatctctagaaaaataacatcaagaatttttcaaga 228069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 534
Target Start/End: Complemental strand, 31644715 - 31644662
Alignment:
Q  482 aaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||| |||||||||||| ||||||||| |||||||||||| || |||||||    
T  31644715 aaatagtgcattgtgattggctgctctttattcttgaagaattattgatgttat 31644662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 1e-64; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 13686194 - 13686017
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||     
T  13686194 aggaaaatgctatttctctagaaaaatagcatcaagaattttttaagacacaattggcaagttttaattgcatgatttatttgttcacttcctatttttc 13686095  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||||||||||||||| |||| |||| |||||||||||| ||||||||| ||||||| ||||||| |||||||    
T  13686094 agccacacctccttgaattgtggcaagtagtgcattgtgattggctgctctttattcttgaaaaattcttgatgttat 13686017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 360 - 534
Target Start/End: Complemental strand, 19899118 - 19898943
Alignment:
Q  360 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 459  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  || |||||||||||||||||||||||||||| |||||||| |||| ||    
T  19899118 gaaaatgctatttctctagaaaaatagcatcacgaatttttcaagacacaactggcaagttttaattgcatgatttatttgttcacttcctaattttcag 19899019  T
Q  460 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    | | |||||||||||||||  |||||| | |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  19899018 caatacctccttgaattgtgacaaataatgcattgtgattggctgctctttattcttgaagaattcttaatgttat 19898943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 355 - 534
Target Start/End: Original strand, 14940982 - 14941163
Alignment:
Q  355 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattt 454  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||| ||||||||||||||| ||||| |||||    
T  14940982 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacaactggcaagttttaatttcatgatttatttgttcacttcttattt 14941081  T
Q  455 tt-tagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||  || |||||||| ||||||||| ||||||||| |||||||||||  ||||||||| |||||||||||| || |||||||    
T  14941082 ttcgagtcacacctctttgaattgtggcaaatagtgcattgtgattgactgctctttattcttgaagaattattgatgttat 14941163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 363 - 534
Target Start/End: Original strand, 41464902 - 41465074
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagcca 462  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||| | |||    
T  41464902 aatgttatttctctagaaaaataacatcaagaatttttcaagacacagttgacaagttttaattgcatgatttatttgttcactttctatttttcaacca 41465001  T
Q  463 cacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||||||||  ||||||||| |||||||||  | ||| ||||| ||||||||||||||| |||||||    
T  41465002 cacctccttgaattgcggcaaatagtgcattgtgatccgctgcactttattcttgaagaattcttgatgttat 41465074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 25415114 - 25414937
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||| || |||||     
T  25415114 aggaaaatgctatatctctagaaaaatagtataaagaatttttcaagacacagctgataagttttaattgcatgatttatttgttcactttctttttttc 25415015  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||  || |||||| ||||||||||||||| |||||||    
T  25415014 agccatacctccttgaattgtggcaaatagtgcattgtgattgactgttctttattcttgaagaattcttgatgttat 25414937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 161 - 319
Target Start/End: Original strand, 9991420 - 9991578
Alignment:
Q  161 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 260  Q
    |||||||||||| | |  |||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||  ||||||||||||| |    
T  9991420 aaatgctaaccattgcccttggggcattggataaagaaacaaaaatagaaattttgtattggaaaatgataaaaagtagtcaaatcaacttgtaaaaaat 9991519  T
Q  261 ttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgccct 319  Q
    |||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||    
T  9991520 ttataaattgttgttttcaatgtaaaactactaattttgattaccttaaccattgccct 9991578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 358 - 526
Target Start/End: Complemental strand, 28429479 - 28429313
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||| ||||| |||||||     
T  28429479 aggaaaatgctatttctttagaaaaatagcatcaagaatttttcatgacac---tgacaagttttaattgcatgatttatttgttcacttcttatttttc 28429383  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 526  Q
    || ||||||||||| |||| | ||||||| | ||||||| |||| ||||||||| |||||||||||||||    
T  28429382 agtcacacctccttaaattatggcaaataatgcattgtgtttggctgctctttattcttgaagaattctt 28429313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 376 - 534
Target Start/End: Original strand, 3810285 - 3810444
Alignment:
Q  376 tagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaat 475  Q
    |||||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||    
T  3810285 tagaaaaatagcatcaagaaattttcaagacacagctggcaagttttaattgcatgatttatttgttcacttcttatttttcagtcacacctccttgaat 3810384  T
Q  476 tgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||| ||||||||| |||||| ||||| | ||||||| |||||||||||| || |||||||    
T  3810385 tgtggcaaatagtgcattgtaattggctactctttattcttgaagaattattaatgttat 3810444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 534
Target Start/End: Complemental strand, 42264030 - 42263855
Alignment:
Q  360 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 459  Q
    ||||||| |||||||||| |||||||||||||| | |||||||||||||    | |||||||||||||||| ||||||||||| | ||||||||||| ||    
T  42264030 gaaaatgttatttctctaaaaaaatagcatcaaaattttttcaagacacgacagtcaagttttaattgcataatttatttgttcatttcctatttttcag 42263931  T
Q  460 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||||||||||||  ||||| || |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  42263930 ccacacctccttgaattgtgacaaattgtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 42263855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 357 - 534
Target Start/End: Original strand, 45093146 - 45093320
Alignment:
Q  357 taggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 456  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| ||| |||  || |||||||||||||||||| ||||| |||||||||||||    
T  45093146 taggaaaatgttatttctctagaaaaatagcatcaagaattttttaagatacagttgggaaattttaattgcatgatttaattgtttacttcctattttt 45093245  T
Q  457 tagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
     || || ||||||||||||||| ||||||||| ||||||||    |||||||||| |||||||||||| || |||||||    
T  45093246 cagtcatacctccttgaattgtggcaaatagtgcattgtga----ttgctctttattcttgaagaattattgatgttat 45093320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 359 - 478
Target Start/End: Original strand, 28716316 - 28716435
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||| ||||||||||||| |    
T  28716316 ggaaaatgttatttttctagaaaaatagcatcaagaatttttcaagacacaactggcaagttttaattgcattatttatttgttcacttcctatttttca 28716415  T
Q  459 gccacacctccttgaattgt 478  Q
    |||||||||| |||||||||    
T  28716416 gccacacctctttgaattgt 28716435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 184 - 313
Target Start/End: Complemental strand, 41464391 - 41464262
Alignment:
Q  184 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 283  Q
    |||||| ||||||||| ||||||| ||||||||| ||| ||||| ||||||||  || ||| ||||||||||||||||||||||||||||||||||||||    
T  41464391 gcattgaataaaggaataaaaatagaaattttgtattgaaaaattataaaaagcggtcaagtcaacttgtaaaaagtttataaattgttgtttccaatgt 41464292  T
Q  284 aaagctgctaattttggttaccttaaccat 313  Q
    |||| | |||||||||||||||||||||||    
T  41464291 aaagatactaattttggttaccttaaccat 41464262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 359 - 534
Target Start/End: Original strand, 35323474 - 35323650
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||| ||||||||||||||||||| || ||||||||||  ||||||| |||||||||||||||| |||||||||| |||| | ||  ||||||| |    
T  35323474 ggaaaatgttatttctctagaaaaatagtattaagaattttttcagacacagttgacaagttttaattacatgatttatatgttcagtttttatttttca 35323573  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||| ||||||||| |||||||||  ||||||||||  || |||||| |||||||||||| || |||||||    
T  35323574 gccacacctcattgaattgtggcaaatagtgtattgtgattgactgttctttattcttgaagaatttttgatgttat 35323650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 358 - 534
Target Start/End: Original strand, 35676269 - 35676452
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattg-------catgatttatttgttgacttcct 450  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||  || |||||||||||||       ||| ||||||||||| ||||| |    
T  35676269 aggaaaatgctatttctctagaaaaatagcatcaagattttttttagacacaactggcaagttttaattgttcacttcat-atttatttgttcacttcat 35676367  T
Q  451 attttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||| || |||||||||||||||||| ||||||||| ||||||| |||  ||||||||| |||| |||||||||| |||||||    
T  35676368 atttttcagtcacacctccttgaattgtggcaaatagtgcattgtggttgactgctctttattcttaaagaattcttgatgttat 35676452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 180 - 316
Target Start/End: Original strand, 32354728 - 32354864
Alignment:
Q  180 tggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcca 279  Q
    ||||| |||||||||||||||||||||| ||| ||  ||||| ||||||||||||||| || ||| |||||||||||||||||||||||| || ||| ||    
T  32354728 tggggtattggataaaggaacaaaaataaaaaattcctgttgaaaaatgataaaaagtggtcaagtcaacttgtaaaaagtttataaattattatttaca 32354827  T
Q  280 atgtaaagctgctaattttggttaccttaaccattgc 316  Q
    |||||||  | |||||||||||||||||||| |||||    
T  32354828 atgtaaaattactaattttggttaccttaactattgc 32354864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 161 - 315
Target Start/End: Complemental strand, 6084836 - 6084681
Alignment:
Q  161 aaatgctaaccaatacttttggggcattggataaaggaacaaaaat-ataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaag 259  Q
    |||||||||||| | |  || ||| ||||||||||||||||||||| | ||| ||||| ||| ||||||||||||||| || ||| ||| ||||||||||    
T  6084836 aaatgctaaccattgcccttagggtattggataaaggaacaaaaattaaaaaatttgtattgaaaaatgataaaaagtggtcaagtcaatttgtaaaaag 6084737  T
Q  260 tttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattg 315  Q
    |||||||| | ||||||||||||||||||| |||||||| |||||||||| |||||    
T  6084736 tttataaaatattgtttccaatgtaaagctactaattttagttaccttaatcattg 6084681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 209 - 315
Target Start/End: Original strand, 3095067 - 3095173
Alignment:
Q  209 aaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttacctta 308  Q
    ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||| ||||||| ||||||||  | ||||||||||||||||||    
T  3095067 aaattttgtgttggaaaatgataaaaaatagtcaaatcaacttgtaaaaagtttataaattattgtttctaatgtaaaagtactaattttggttacctta 3095166  T
Q  309 accattg 315  Q
    |||||||    
T  3095167 accattg 3095173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 36402541 - 36402436
Alignment:
Q  213 tttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaacca 312  Q
    |||||||| ||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||    
T  36402541 tttgtgttcgaaaatgatcaaaagtagtcaagttaacttgtaaaaagtttataaattgttgtttccaatataaaactactaattttggttaccttaatca 36402442  T
Q  313 ttgccc 318  Q
    ||||||    
T  36402441 ttgccc 36402436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 178 - 303
Target Start/End: Complemental strand, 40356529 - 40356405
Alignment:
Q  178 tttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttc 277  Q
    |||||||||||||||||||||||||||||  ||||||| ||||  ||||||||||||||| |||||   || ||||| ||||||||||||||||||||||    
T  40356529 tttggggcattggataaaggaacaaaaatg-aaattttatgttaaaaaatgataaaaagtggttaaattaatttgtataaagtttataaattgttgtttc 40356431  T
Q  278 caatgtaaagctgctaattttggtta 303  Q
    |||| ||||| | |||||||||||||    
T  40356430 caatataaagttactaattttggtta 40356405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 355 - 486
Target Start/End: Original strand, 36690814 - 36690946
Alignment:
Q  355 tttaggaaaatgctatttctctagaaaaatagcatcaagaat--ttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctat 452  Q
    |||||||||||||||||||| |||||||||| ||| ||||||  |||||||||||||  |||||| |||||||| | ||||||||||||| ||||||||     
T  36690814 tttaggaaaatgctatttctttagaaaaataacattaagaatatttttcaagacacagctgacaaattttaattacttgatttatttgttcacttccta- 36690912  T
Q  453 tttttagccacacctccttgaattgtagcaaata 486  Q
     ||| |||||| | |||||||||||| |||||||    
T  36690913 ctttcagccacgcttccttgaattgtggcaaata 36690946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 417 - 534
Target Start/End: Original strand, 29689277 - 29689392
Alignment:
Q  417 agttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tctt 515  Q
    |||||||||||||||||||||| ||| ||||||||||||| || || ||||||||||||| ||||||||||| |||||||||   |||||||||| ||||    
T  29689277 agttttaattgcatgatttattagttcacttcctatttttcagtcaaacctccttgaattatagcaaatagtgcattgtgat---ttgctctttattctt 29689373  T
Q  516 gaagaattcttcatgttat 534  Q
     || ||||||| |||||||    
T  29689374 aaaaaattcttgatgttat 29689392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 18904321 - 18904248
Alignment:
Q  185 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaa 258  Q
    ||||| |||| |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18904321 cattgaataagggaaaaaaaatagaaattttgtgttggaaaatgataaaaagtagttaagtcaacttgtaaaaa 18904248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 419 - 534
Target Start/End: Original strand, 2752692 - 2752808
Alignment:
Q  419 ttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgct-ctttatcttga 517  Q
    ||||||||| ||||||||||| || ||||| ||||||| || || | ||||||||||||| ||||||||| |||||||||||| ||||  ||| ||||||    
T  2752692 ttttaattgtatgatttatttattcacttcttatttttcagtcagatctccttgaattgtggcaaatagtgcattgtgattggctgctattttttcttga 2752791  T
Q  518 agaattcttcatgttat 534  Q
    ||||||||| |||||||    
T  2752792 agaattcttaatgttat 2752808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 534
Target Start/End: Original strand, 16058375 - 16058548
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttc-aagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    |||||||  |||||||||| ||||||||||||||||||||||  ||||||||    |||||||||| ||||||||||||||| || ||||| |||||||     
T  16058375 ggaaaatcttatttctcta-aaaaatagcatcaagaatttttttaagacaca----acaagttttatttgcatgatttatttattcacttcatatttttc 16058469  T
Q  458 agccacac--ctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||  |||||||||||||  ||||| || |||| | || |  | ||||||| ||||||||||||||| |||||||    
T  16058470 agccacacaactccttgaattgtgacaaat-gttcattattatagactactctttattcttgaagaattcttaatgttat 16058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 2752614 - 2752659
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaag 404  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2752614 ggaaattgctatttctctagaaaaatagcatcaagaatttttcaag 2752659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 40126520 - 40126596
Alignment:
Q  380 aaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 456  Q
    ||||||||||| ||||||||| |||| |||  | |||| ||||||||| |||||||||||||| |||||||||||||    
T  40126520 aaaatagcatcgagaattttttaagatacagctcacaaattttaattgtatgatttatttgttcacttcctattttt 40126596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 5711231 - 5711181
Alignment:
Q  185 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaa 235  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  5711231 cattagataaaggaataaaaataaaaattttgtgttggaaaatgataaaaa 5711181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 24413903 - 24413862
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaattttt 400  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  24413903 ggaaaatgctatttctctagaaaaatagcatcaataattttt 24413862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 13685997 - 13686039
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  13685997 aatgctatatctctagaaaaataacatcaagaatttttcaaga 13686039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 531
Target Start/End: Original strand, 28716437 - 28716511
Alignment:
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgt 531  Q
    ||||||||||| ||||||||| ||||||||| ||||||||| || | || |||| ||||||||||||||| ||||    
T  28716437 agccacacctctttgaattgtggcaaatagtgcattgtgatcggctactatttattcttgaagaattcttgatgt 28716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 534
Target Start/End: Original strand, 23454350 - 23454436
Alignment:
Q  450 tattttttagccacacctccttgaattgtagcaaa-tagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||| || | ||||||||||||||||  |||| |||| |||||||||||  ||||||||| |||||||||||| || |||||||    
T  23454350 tatttttcagtcgcacctccttgaattgtgtcaaattagtgcattgtgattgactgctctttattcttgaagaattttttatgttat 23454436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 39085771 - 39085848
Alignment:
Q  160 aaaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagt 237  Q
    ||||||||||||| | || ||||| ||||||||||||| | ||||||| |||| |    |||||||||||||||||||    
T  39085771 aaaatgctaaccattgctcttgggacattggataaagggataaaaatagaaatataacattggaaaatgataaaaagt 39085848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 359 - 534
Target Start/End: Original strand, 521763 - 521939
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||||||||| |||||| ||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |    
T  521763 ggaaaatgctatttatctagacaaatatcatcaagaattttttaagacacagttgtcaagttttaattgcatgatttatttgttcacttcctatttttca 521862  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  521863 gccacacctccttgaattgtggcaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 521939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 358 - 534
Target Start/End: Original strand, 23642977 - 23643154
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| ||| ||||||||||| ||||||||||||||    
T  23642977 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacagctgacaaattttaattccataatttatttgttcacttcctatttttt 23643076  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    || |||||||||||||||||| ||||||||| |||||||||||  |  | |||| ||||||||||||||| |||||||    
T  23643077 agtcacacctccttgaattgtggcaaatagtgcattgtgattgactaatatttattcttgaagaattcttgatgttat 23643154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 36517715 - 36517538
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||||||||| |||||| ||||| | ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36517715 aggaaaatgctatttatctagataaataacttcaagaatttttcaaaacacagttggcaagttttaattgcatgatttatttgttcacttcctatttttt 36517616  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |  |||||||||||||||||| ||||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  36517615 attcacacctccttgaattgtggcaaatagtgcattgtgattgactgctctttattcttgaagaattcttgatgttat 36517538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 361 - 534
Target Start/End: Complemental strand, 45166424 - 45166250
Alignment:
Q  361 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 460  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || ||| ||| |||||||||||||||||||||||  ||| ||||||||| |||    
T  45166424 aaaatgttatttctctagaaaaatagcatcaagaatttttcaagacgcagttggcaaattttaattgcatgatttatttgtccactccctatttttcagc 45166325  T
Q  461 cacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||| |||||||||||||| ||||||||| |||||||||||| ||||||||| | ||||||||||||| |||||||    
T  45166324 cacgcctccttgaattgtggcaaatagtgcattgtgattggctgctctttattattgaagaattcttgatgttat 45166250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 31788506 - 31788329
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||| |||||||||| ||||||| | ||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||     
T  31788506 aggaaaatgttatttctctataaaaataacttcaagaatttttcaagacacaattgacaagttttaactgcaagatttatttgttcacttcctatttttc 31788407  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |  |||||||||||||||||| | ||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  31788406 aatcacacctccttgaattgtggtaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 31788329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 358 - 534
Target Start/End: Original strand, 50612872 - 50613049
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||| ||||  |||||||     
T  50612872 aggaaaatgttatttctctataaaaacagcatcaagaatttttcaatacacagctgacaagttttaattgcataatttatttgttcactttatatttttc 50612971  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    || |||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  50612972 agtcacacctccttgaattgtggcaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 50613049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 361 - 526
Target Start/End: Original strand, 38176390 - 38176556
Alignment:
Q  361 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 460  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||| ||||||| |||    
T  38176390 aaaatgatatttctttagaaaaatagcattaagaatttttcaagacacagttggcaagttttaattgcatgttttatttgttcacttcatatttttcagc 38176489  T
Q  461 cacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 526  Q
    |||||||||||||||||  ||||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  38176490 cacacctccttgaattgaggcaaatagtgcattgcgattggctgctctttattcttgaagaattctt 38176556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 388 - 534
Target Start/End: Original strand, 1561283 - 1561430
Alignment:
Q  388 atcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatag 487  Q
    |||||||||||||  |||||||  |||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  1561283 atcaagaattttttcagacacagctgacaagtttcaattgcatgatttatttgttcacttcctatttttcagccacacctccttgaattgtggcaaatag 1561382  T
Q  488 tacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    | |||||||||||||||||||||| ||||||||||||||| |||||||    
T  1561383 tgcattgtgattggttgctctttattcttgaagaattcttgatgttat 1561430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 179 - 316
Target Start/End: Complemental strand, 38611469 - 38611332
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 278  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||||||||    
T  38611469 ttgggacattggataaaggaagaaaaatagaaattttgtgttggaaaatgatagaaagttgtcaagtcaacttgtaaaaagtttataaattgttgtttcc 38611370  T
Q  279 aatgtaaagctgctaattttggttaccttaaccattgc 316  Q
    ||| ||||||| |||||||| |||||||||||||||||    
T  38611369 aatataaagctactaattttagttaccttaaccattgc 38611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 358 - 526
Target Start/End: Complemental strand, 39145452 - 39145283
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||| ||||||| |||||| | |||||||||||     
T  39145452 aggaaaatgctatttctctagaaaaatagcatcaagaatttgtcaagacacagttgtcaagttttaattgtatgatttctttgttcatttcctatttttc 39145353  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 526  Q
    || || ||||| ||||||||||||||||||| |||||| ||||| |||| |||| |||| ||||||||||    
T  39145352 agtcatacctcattgaattgtagcaaatagtgcattgtaattggctgctttttattcttaaagaattctt 39145283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 161 - 309
Target Start/End: Original strand, 46055753 - 46055901
Alignment:
Q  161 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 260  Q
    |||||||||||| | |  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  46055753 aaatgctaaccattgcccttggagcattggataaaggaacaaaaatagaaattttgtgttggaaaatgataaaaagtagtcaagtcaacttgtaaaaagt 46055852  T
Q  261 ttataaattgttgtttccaatgtaaagctgctaattttggttaccttaa 309  Q
    | ||||||||||||||  |||||||| || |||||||||||||||||||    
T  46055853 taataaattgttgtttttaatgtaaaactactaattttggttaccttaa 46055901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 359 - 534
Target Start/End: Complemental strand, 52546942 - 52546766
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||  | ||||||||||||||||| ||||||||||| | ||||||||||| |    
T  52546942 ggaaaatgctatttctctagaaaaattgcatcaagaattttccaagacacaccttacaagttttaattgcataatttatttgttcatttcctatttttca 52546843  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
      |||||||| |||||||||  ||||||| ||||||||||||| ||||||||| |||||||||||| || |||||||    
T  52546842 ctcacacctcattgaattgtgacaaatagcacattgtgattggctgctctttattcttgaagaatttttgatgttat 52546766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 199 - 313
Target Start/End: Original strand, 38014655 - 38014769
Alignment:
Q  199 acaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaatttt 298  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  38014655 acaaaaatataaattttgtgttggaaaatgataaaaagtggtcaagtcaacttataaaaagtttataaatcgttgtttccaatgtaaagctactaatttt 38014754  T
Q  299 ggttaccttaaccat 313  Q
    | |||||||||||||    
T  38014755 gattaccttaaccat 38014769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 376 - 534
Target Start/End: Complemental strand, 20912350 - 20912191
Alignment:
Q  376 tagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaat 475  Q
    ||||||||||||||||||||||||| |||||| |  ||| ||||||||||||||||||||||||||| ||||||||||||| || ||||||||||| |||    
T  20912350 tagaaaaatagcatcaagaatttttaaagacatagctgataagttttaattgcatgatttatttgttcacttcctatttttcagtcacacctccttaaat 20912251  T
Q  476 tgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    | |  |||||||| |||||| ||||  ||||||||| ||||||||||||||| |||||||    
T  20912250 tatgacaaatagtgcattgttattgactgctctttattcttgaagaattcttgatgttat 20912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 359 - 526
Target Start/End: Original strand, 34624486 - 34624643
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| |           |||||||||||||||||||||||| ||||||||||||| |    
T  34624486 ggaaaatgttatttctctagaaaaatagcatcaagaattttttaagaaa-----------ttttaattgcatgatttatttgttcacttcctatttttca 34624574  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 526  Q
    ||||||| ||||  |||||| | ||||||| |||||||||||| ||||||||| |||||||||||||||    
T  34624575 gccacacttcctcaaattgtggtaaatagtgcattgtgattggctgctctttattcttgaagaattctt 34624643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 187 - 303
Target Start/End: Original strand, 36473310 - 36473426
Alignment:
Q  187 ttggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaa 286  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||||| || ||| |||| |||||||||||||||||||||| ||| ||||| |||    
T  36473310 ttggataaaggaacaaaaatagaaaatttgtgttgaaaaatgataaaaagtggtcaagtcaacgtgtaaaaagtttataaattgttattttcaatgcaaa 36473409  T
Q  287 gctgctaattttggtta 303  Q
    ||| |||||||||||||    
T  36473410 gctactaattttggtta 36473426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 358 - 520
Target Start/End: Original strand, 51297021 - 51297186
Alignment:
Q  358 aggaaaatgctatttctctagaaaaa-tagcatcaagaatttttcaagacacat-ttgacaagttttaattgcatgatttatttgttgacttcctatttt 455  Q
    ||||||||| |||||||||| ||||| ||||||||| | ||||||||||| ||  |||| || |||||||||||||||||||||||| |||| |||||||    
T  51297021 aggaaaatgttatttctctaaaaaaaatagcatcaaaattttttcaagacgcaagttgataaattttaattgcatgatttatttgttcactttctatttt 51297120  T
Q  456 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat-cttgaaga 520  Q
    | || || ||||  ||||||||| ||||||||| ||||||| |||| || ||||||| ||||||||    
T  51297121 tcagtcatacctttttgaattgtggcaaatagtgcattgtggttggctgttctttatgcttgaaga 51297186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 185 - 317
Target Start/End: Complemental strand, 20499437 - 20499306
Alignment:
Q  185 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgta 284  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| | ||| ||| || ||||||||||||||||| || |||  ||| ||    
T  20499437 cattggataaaggaacaaaaatagaaattttgtgttg-aaaacgataaaaagtaatcaagtcaatttataaaaagtttataaattattatttttaatata 20499339  T
Q  285 aagctgctaattttggttaccttaaccattgcc 317  Q
    || ||  ||||||||||||| ||||||||||||    
T  20499338 aaactattaattttggttactttaaccattgcc 20499306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 52313461 - 52313553
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgtt 272  Q
    |||| |||||||||||||||||||||||  ||||||||||||  ||||| ||||||||| || ||  |||||| ||||| ||||||||||||||    
T  52313461 ttggagcattggataaaggaacaaaaatcaaaattttgtgtt-aaaaatcataaaaagtggtcaaatcaacttataaaaggtttataaattgtt 52313553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 478
Target Start/End: Original strand, 22650450 - 22650513
Alignment:
Q  415 caagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgt 478  Q
    |||||||||||||||||||||||||||| ||||  || |||| |||||||||||||| ||||||    
T  22650450 caagttttaattgcatgatttatttgttcactttttacttttcagccacacctccttaaattgt 22650513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 521
Target Start/End: Complemental strand, 9496674 - 9496567
Alignment:
Q  415 caagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tc 513  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||| ||| ||||| |  || ||||| ||||| |||  ||||||||||| | ||||||| ||    
T  9496674 caagctttaactgcatgatttatttgttcactccctatttttcagcaacaccactgtgtattgtggcaaacagtgaattgtgattggctactctttattc 9496575  T
Q  514 ttgaagaa 521  Q
    ||||||||    
T  9496574 ttgaagaa 9496567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 21195283 - 21195379
Alignment:
Q  185 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    |||||| |||||||||||||||| |||| |  ||||||||| |||| |||||| || ||  |||||| | ||||||| | |||||||| ||||||||    
T  21195283 cattggttaaaggaacaaaaatagaaatatcttgttggaaagtgatgaaaagtggtgaattcaactttttaaaagttaaaaaattgttatttccaat 21195379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 24980126 - 24980178
Alignment:
Q  258 agtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaac 310  Q
    |||||||||||||||||||||||  ||||| | |||||||||||| |||||||    
T  24980126 agtttataaattgttgtttccaacataaagttactaattttggttgccttaac 24980178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 32734503 - 32734623
Alignment:
Q  184 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 283  Q
    ||||||| ||| | || |||||||  ||| || ||||| ||| || |||||| | || ||| |||||| ||||||| ||| |||||||||||||||||      
T  32734503 gcattggttaaggaaataaaaatagcaatattatgttgaaaagtggtaaaaaatggtcaagtcaacttctaaaaaggttagaaattgttgtttccaatac 32734602  T
Q  284 aaagctgctaattttggttac 304  Q
    |||||| |||||||| |||||    
T  32734603 aaagctactaattttagttac 32734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Complemental strand, 50613069 - 50613027
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  50613069 aatgctatatctctagaaaaataacatcaagaattcttcaaga 50613027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 500
Target Start/End: Original strand, 29011343 - 29011379
Alignment:
Q  464 acctccttgaattgtagcaaatagtacattgtgattg 500  Q
    ||||||||||||||| | |||||||||||||||||||    
T  29011343 acctccttgaattgtggtaaatagtacattgtgattg 29011379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 478
Target Start/End: Original strand, 38169329 - 38169369
Alignment:
Q  438 ttgttgacttcctattttttagccacacctccttgaattgt 478  Q
    ||||| |||||||||||||||| |||||||||||| |||||    
T  38169329 ttgttcacttcctattttttagtcacacctccttgtattgt 38169369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 4e-61; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 360 - 534
Target Start/End: Original strand, 37674000 - 37674175
Alignment:
Q  360 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 459  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||  ||||||| ||    
T  37674000 gaaaatgatatttctctagaaaaatagcatcaagaatttttcaagacacgtgtgacaagttttaattgcatgatttatttgttaactttttatttttcag 37674099  T
Q  460 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||| ||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||| |||||||    
T  37674100 ccacacctctttgaattgtagtaaatagtacattgtgattgactgctctttagtcttgaagaattcttgatgttat 37674175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 359 - 534
Target Start/End: Complemental strand, 41633416 - 41633241
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||| |||||||| ||| ||||||||||| ||||||||||||| |    
T  41633416 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacaaagctgacaaattttaattacat-atttatttgttcacttcctatttttca 41633318  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||||||||||||| |||| |||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  41633317 gccacacctccttgaattgtggcaagtagtgcattgtgattggctgctctttattcttgaagaattcttaatgttat 41633241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 360 - 534
Target Start/End: Complemental strand, 24683275 - 24683100
Alignment:
Q  360 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 459  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| ||    
T  24683275 gaaaatgttatttctttagaaaaatagtatcaagaatttttcaagacacacttgataagttttaattgcatgatttatttgttcacttcctatttttcag 24683176  T
Q  460 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
     ||||||| | |||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  24683175 tcacaccttcctgaattgtggcaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 24683100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 358 - 534
Target Start/End: Original strand, 18375389 - 18375565
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |||||||| ||||     
T  18375389 aggaaaatgttatttctctagaaaaatagcatcaagaatttttcaagacacaactggcaagttttaattgcatgatttatttgttcacttccta-ttttc 18375487  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||||||||||||||| ||||||||| |||||||||||   || ||||| ||||||||||||||| |||||||    
T  18375488 agccacacctccttgaattgtggcaaatagtgcattgtgattgaccgcactttattcttgaagaattcttgatgttat 18375565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 161 - 321
Target Start/End: Original strand, 16559974 - 16560136
Alignment:
Q  161 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagta--gttaaggcaacttgtaaaaa 258  Q
    |||||||||||| | |  ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||  |  || ||| |||||||||||||    
T  16559974 aaatgctaaccattgcccttggggcattggataaaggaataaaaatagaaattttgtgttggaaaatgataaaaaaaatggtcaagtcaacttgtaaaaa 16560073  T
Q  259 gtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgccctca 321  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  16560074 gtttataaattgttgtttccaatgtaaaactactaattttggttaccttaaccattgccctca 16560136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 359 - 501
Target Start/End: Complemental strand, 54358312 - 54358170
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||||||||| |    
T  54358312 ggaaaatgttatttctctagaaaaatagcatcaagaatttttcaagacatagttggcaagttttaattgcatgatttatttgttcacttcctatttttca 54358213  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattgg 501  Q
    |||||||| |||| |||||| ||||||||| ||||||||||||    
T  54358212 gccacacccccttaaattgtggcaaatagtgcattgtgattgg 54358170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 179 - 319
Target Start/End: Original strand, 31463291 - 31463431
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 278  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| || ||| |||||||||||||||||| ||||||||||||||    
T  31463291 ttggggcattggataaaggaacaaaaatagaaattttgtgttggaaagtggtaaaaagtggtcaagtcaacttgtaaaaagtttacaaattgttgtttcc 31463390  T
Q  279 aatgtaaagctgctaattttggttaccttaaccattgccct 319  Q
    || ||||| || |||||||||||||||| ||||||||||||    
T  31463391 aacgtaaaactactaattttggttacctcaaccattgccct 31463431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 181 - 318
Target Start/End: Complemental strand, 54400317 - 54400182
Alignment:
Q  181 ggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaa 280  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||| |    
T  54400317 ggggcattggataaaggaataaaaataaaaattttgtgttggaaaatgataaaaa-tggttaagtcaacttgtaaaaagtttat-aattgttgtttccga 54400220  T
Q  281 tgtaaagctgctaattttggttaccttaaccattgccc 318  Q
    |||||||||  |||||||||||||||||||||||||||    
T  54400219 tgtaaagctattaattttggttaccttaaccattgccc 54400182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 165 - 319
Target Start/End: Original strand, 19934449 - 19934603
Alignment:
Q  165 gctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttat 264  Q
    |||||||| | | ||||||  |||||| ||||||||||||||| ||||||||| ||||||||||||||||| | || ||| |||||||||||||||||||    
T  19934449 gctaaccattgcctttgggatattggagaaaggaacaaaaataaaaattttgtattggaaaatgataaaaaatggtcaagtcaacttgtaaaaagtttat 19934548  T
Q  265 aaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgccct 319  Q
    ||||||||||||  |||||||| || ||||||||||||| |||||||||||||||    
T  19934549 aaattgttgtttttaatgtaaaactactaattttggttatcttaaccattgccct 19934603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 359 - 534
Target Start/End: Original strand, 23348112 - 23348291
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgact---tcctatttt 455  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||   |||||||||||||||||||||||||||||| |||   |||||||||    
T  23348112 ggaaaatgctatttctctagaaaaatagcatcaataatttttcaagaaacaaccgacaagttttaattgcatgatttatttgttcacttcctcctatttt 23348211  T
Q  456 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    | ||||||||||||||||||| | | |||||||  ||||||||||  || |||||| |||| ||||||| || |||||||    
T  23348212 tcagccacacctccttgaattatggtaaatagtgtattgtgattgagtgttctttattcttaaagaattattgatgttat 23348291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 358 - 478
Target Start/End: Original strand, 17847540 - 17847660
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||| ||||||||     
T  17847540 aggaaaatgttatttctctcgaaaaatagcatcaagaatttttcaagacacagttggcaagttttaattgcatgatttatttgttcactttctatttttc 17847639  T
Q  458 agccacacctccttgaattgt 478  Q
     | ||||||||||||||||||    
T  17847640 tgtcacacctccttgaattgt 17847660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 179 - 319
Target Start/End: Complemental strand, 22665793 - 22665653
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 278  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| || ||| ||| |||||||||||||| ||||||||||||||    
T  22665793 ttggggcattggataagggaacaaaaatagaaattttctgttggaaaatgataaaaagtggtcaagtcaaattgtaaaaagtttacaaattgttgtttcc 22665694  T
Q  279 aatgtaaagctgctaattttggttaccttaaccattgccct 319  Q
    |||||||| ||  ||| ||||||||||||||| | ||||||    
T  22665693 aatgtaaaactattaaatttggttaccttaactagtgccct 22665653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 358 - 500
Target Start/End: Original strand, 4512160 - 4512303
Alignment:
Q  358 aggaaaatgctatttctctagaaaa-atagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 456  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| || ||  || |||||||||||||||| ||||||||||| |||||||||||||    
T  4512160 aggaaaatgttatttctctagaaaaaatagcatcaagaatttttcaatactcaggtggcaagttttaattgcatcatttatttgtttacttcctattttt 4512259  T
Q  457 tagccacacctccttgaattgtagcaaatagtacattgtgattg 500  Q
     || |||| ||||||||||||| |||||||||| ||||||||||    
T  4512260 cagtcacatctccttgaattgtggcaaatagtatattgtgattg 4512303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 360 - 483
Target Start/End: Complemental strand, 41878715 - 41878592
Alignment:
Q  360 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 459  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  41878715 gaaaatgctatttatttagaaaaatagcatcaagaatttttcaagacataactgacaagttttaattgcatgatttatttgtttacttcctatttttcag 41878616  T
Q  460 ccacacctccttgaattgtagcaa 483  Q
    ||||||||  ||||||||| ||||    
T  41878615 ccacaccttattgaattgtggcaa 41878592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 183 - 319
Target Start/End: Original strand, 51581458 - 51581595
Alignment:
Q  183 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaa-gtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || || |||  |||||||||||  |||| |||||||||||| ||||    
T  51581458 ggcattggataaaggaacaaaaatagaaattttgtgttggaaagtgataaaaaagtggtcaagttaacttgtaaaacatttacaaattgttgttttcaat 51581557  T
Q  282 gtaaagctgctaattttggttaccttaaccattgccct 319  Q
    |||||||  |||||||||||||||||||||||||||||    
T  51581558 gtaaagcgactaattttggttaccttaaccattgccct 51581595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 186 - 318
Target Start/End: Complemental strand, 27628969 - 27628837
Alignment:
Q  186 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 285  Q
    |||||||||| ||||||||||| |||  || |||||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||| ||||||||    
T  27628969 attggataaaagaacaaaaataaaaaaattttgttggaaaatgattaaaagtggtcaagtcaacttgtaaaaagtttataaattgttgttttcaatgtaa 27628870  T
Q  286 agctgctaattttggttaccttaaccattgccc 318  Q
    |||| |||||| |||||||| ||||||||||||    
T  27628869 agctactaattctggttaccataaccattgccc 27628837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 2804451 - 2804325
Alignment:
Q  186 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 285  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || |||  ||| |||    
T  2804451 attgaataaaggaacaaaaatagaaattttgtgttggaaaatgataaaaagtagtcaagtcaacttgtaaaaagtttataaattattattt--aatataa 2804354  T
Q  286 agctgctaattttggttaccttaaccatt 314  Q
    | || ||||||||| |||| |||||||||    
T  2804353 aactactaattttgcttacattaaccatt 2804325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 388 - 534
Target Start/End: Original strand, 26179238 - 26179385
Alignment:
Q  388 atcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatag 487  Q
    ||||||||||||| || |||||  || ||||||| ||||  |||||||||||||| ||||||||||||| |||||||||||||||||||||   ||||||    
T  26179238 atcaagaattttttaaaacacagctgtcaagtttcaatttgatgatttatttgttcacttcctatttttcagccacacctccttgaattgtgttaaatag 26179337  T
Q  488 tacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    | || ||||||||| ||||||||| ||||||||||||||| |||||||    
T  26179338 tgcactgtgattggctgctctttattcttgaagaattcttaatgttat 26179385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 33894178 - 33894078
Alignment:
Q  186 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 285  Q
    |||||||||||||||||||||| |||||||||||| || | |||||||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||    
T  33894178 attggataaaggaacaaaaataaaaattttgtgttagatagtgataaaaagtagtaaagtcaatttgtaaaaagtttataaattgttgtttcgaatgtaa 33894079  T
Q  286 a 286  Q
    |    
T  33894078 a 33894078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 512
Target Start/End: Original strand, 47838942 - 47839094
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||  ||   || |||||||||||||| | |||||| | || ||||||||      
T  47838942 ggaacatgctatttctctataaaaatagcatcaagaatttt-caagacacagctggtgagatttaattgcatgatgtttttgttcattttctatttttcg 47839040  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 512  Q
    ||||||||||||| |||||| ||||||||||||||||| |||  ||||||||||    
T  47839041 gccacacctccttaaattgtggcaaatagtacattgtggttgactgctctttat 47839094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 182 - 310
Target Start/End: Original strand, 26805681 - 26805809
Alignment:
Q  182 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    ||||||||||||| | | |||||||| |||  |  ||||| ||| || |||||||| || ||| || ||||||||||||||| |||||||||||||||||    
T  26805681 gggcattggataaggaagcaaaaatagaaaaatgatgttgaaaagtggtaaaaagtggtcaagtcagcttgtaaaaagtttaaaaattgttgtttccaat 26805780  T
Q  282 gtaaagctgctaattttggttaccttaac 310  Q
    |||||||| ||||||||||||||||||||    
T  26805781 gtaaagctactaattttggttaccttaac 26805809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 359 - 506
Target Start/End: Original strand, 54021241 - 54021391
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaa---ttgcatgatttatttgttgacttcctatttt 455  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||| | |  |||||||||||||   ||   || |||||||||| |||| |||||||    
T  54021241 ggaaaatgttatttctctagaaaaatagcatcaagaattttttaagataaagctgacaagttttaatttttaattgctttatttgtttactttctatttt 54021340  T
Q  456 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgct 506  Q
    | | |||||||||||| |||||| ||| ||||| |||||||||||| ||||    
T  54021341 tcaaccacacctccttaaattgtggcacatagtgcattgtgattggctgct 54021391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 416 - 534
Target Start/End: Original strand, 47281588 - 47281711
Alignment:
Q  416 aagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaatt----gtagcaaatagtacattgtgattggttgctcttta 511  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| |    || ||||||||| |||||||||| || | ||||||    
T  47281588 aagttttaattgcatgatttatttgttcacttcctatttttcaaccacacctccttgaaattaatgtggcaaatagtgcattgtgatttgtcgttcttta 47281687  T
Q  512 t-cttgaagaattcttcatgttat 534  Q
    | |||||||||||||| |||||||    
T  47281688 ttcttgaagaattcttgatgttat 47281711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 183 - 280
Target Start/End: Original strand, 29533537 - 29533632
Alignment:
Q  183 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaa 280  Q
    ||||||||||||| ||| |||| || ||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  29533537 ggcattggataaaagaataaaa-tagaaattttttgttggaaaatgataaaaagtagtcaagtcaacttgtaaaaagtttat-aattgttgtttccaa 29533632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 49482972 - 49483036
Alignment:
Q  250 ttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccatt 314  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  49482972 ttgtaaaaagtttataaattgttgttttcaatgtaaagctactaattttggttaccttaaccatt 49483036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 41497890 - 41497975
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaag--acacatttgacaagttttaattgcatgatttatttgtt 442  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||||  ||||| |||| |||||||||||||||||||||||||||    
T  41497890 ggaaaatgctatttctctaaaaaaatagcatcaaaaattattcaagacacacagttgataagttttaattgcatgatttatttgtt 41497975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 187 - 307
Target Start/End: Original strand, 54357728 - 54357848
Alignment:
Q  187 ttggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaa 286  Q
    |||||||||| |||||||||| ||||  ||||||| ||| |||| |||||| || ||   ||||||||||||||||| |||||||| ||| |||||||||    
T  54357728 ttggataaagaaacaaaaataaaaataatgtgttgaaaagtgatgaaaagtggtcaaattaacttgtaaaaagtttacaaattgttcttttcaatgtaaa 54357827  T
Q  287 gctgctaattttggttacctt 307  Q
    | |  ||||||||||||||||    
T  54357828 gttattaattttggttacctt 54357848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 401
Target Start/End: Complemental strand, 52726074 - 52726030
Alignment:
Q  357 taggaaaatgctatttctctagaaaaatagcatcaagaatttttc 401  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  52726074 taggaaaatgctatttctctagaaaaatagcatcaagaatttttc 52726030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 7031710 - 7031615
Alignment:
Q  186 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 283  Q
    ||||||||| |||||||||||| |||| || ||||| ||| ||||||||||| || ||  |||||  || |||||||| || ||||||||||||||||    
T  7031710 attggataacggaacaaaaataaaaatattttgttgaaaagtgataaaaagtggtaaaatcaact--tataaagtttaaaatttgttgtttccaatgt 7031615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 361 - 394
Target Start/End: Complemental strand, 47282259 - 47282226
Alignment:
Q  361 aaaatgctatttctctagaaaaatagcatcaaga 394  Q
    ||||||||||||||||||||||||||||||||||    
T  47282259 aaaatgctatttctctagaaaaatagcatcaaga 47282226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 24683080 - 24683122
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  24683080 aatgctatatctctagaaaaataacatcaagaattcttcaaga 24683122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 534
Target Start/End: Complemental strand, 41878406 - 41878345
Alignment:
Q  474 attgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||||||||| |||||||||||| || |||||| || |||||||||| | |||||||    
T  41878406 attgtagcaaatagtgcattgtgattggctgatctttattcatgaagaattcatgatgttat 41878345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 6e-60; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 1270372 - 1270195
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| || |||||||||||||     
T  1270372 aggaaactactatttctctagaaaaatagcatcaaaaatttttcaagacacagttgacaagttttaattgcacgatttatttattcacttcctatttttc 1270273  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||    
T  1270272 agccacaccttcttgaattgtggcaaatagtgcattgagattggttgctctttattcttgaagaattcttgatgttat 1270195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 355 - 534
Target Start/End: Complemental strand, 34476103 - 34475923
Alignment:
Q  355 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattt 454  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||    
T  34476103 tttaggaaaaggctatttctctagaaaaatagtatcaagaatttttcaagacaaagctgacaagttttaattgcatgattgatttgttcacttcctattt 34476004  T
Q  455 tttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    || ||||||||||||||||||||  ||| ||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  34476003 ttcagccacacctccttgaattggggcagatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 34475923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 357 - 526
Target Start/End: Original strand, 31032694 - 31032864
Alignment:
Q  357 taggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 456  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||    
T  31032694 taggaaaatgttatttttctagaaaaatagcatcaagaatttttcaagatacagttgacaagttttaattgcatgatttatttgttcactttctattttt 31032793  T
Q  457 tagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 526  Q
     ||||||||||||||||| ||| ||||||||| |||||||||||  || |||||| |||||||||||||||    
T  31032794 cagccacacctccttgaactgtggcaaatagtgcattgtgattgactgatctttattcttgaagaattctt 31032864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 368 - 534
Target Start/End: Original strand, 29095530 - 29095697
Alignment:
Q  368 tatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacct 467  Q
    ||||||||||||||||||||||||| || ||||||||||| | ||| ||||||||||||||||||| | |||||| ||||||||||||| ||||||||||    
T  29095530 tatttctctagaaaaatagcatcaaaaaattttcaagacatagttgccaagttttaattgcatgatatctttgttcacttcctatttttcagccacacct 29095629  T
Q  468 ccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  29095630 ccttgaattgtggcaaatagtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 29095697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 179 - 318
Target Start/End: Complemental strand, 48034012 - 48033873
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 278  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| ||  |||||| || ||| |||||||||||||||||||||||||||||||||    
T  48034012 ttggggcattagataaaggaacaaaaatagaaattttgtgttggaaaaagaagaaaagtggtcaagccaacttgtaaaaagtttataaattgttgtttcc 48033913  T
Q  279 aatgtaaagctgctaattttggttaccttaaccattgccc 318  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  48033912 aatgtaaagctactaattttggttaccttaaccattgccc 48033873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 358 - 526
Target Start/End: Complemental strand, 16255055 - 16254886
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||  |||||||| |||||||||||||| |||||||||| ||     
T  16255055 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaatacacaactgacaaaatttaattgtatgatttatttgttcacttcctattattc 16254956  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 526  Q
    |||||||||||||| |||| | ||||||||| |||||||||||| || |||||| |||||||||||||||    
T  16254955 agccacacctccttaaattatggcaaatagtgcattgtgattggctgatctttattcttgaagaattctt 16254886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 360 - 512
Target Start/End: Complemental strand, 47550990 - 47550838
Alignment:
Q  360 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 459  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||||||| |||| | ||||||||||||||    
T  47550990 gaaaatgttatttctctagaaaaatagcatcaagaatttttcaagaaacagctggcaagttttaattgcatgatttatatgttcatttcctattttttag 47550891  T
Q  460 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 512  Q
     ||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||    
T  47550890 tcacacctccttaaattgtggcaaatagtgcattgtaatttgctgctctttat 47550838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 362 - 534
Target Start/End: Original strand, 9098571 - 9098741
Alignment:
Q  362 aaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagcc 461  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||| |||| || ||||    
T  9098571 aaatgctttttctctagaaaaatagcatcaagaatttttcaaaacacagctgacaagttttaattgcatgatttatttgttcacttcgtattattcagcc 9098670  T
Q  462 acacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||| ||||||   | ||| ||||| |||||||||||| ||||||||| |||| |||||||||| |||||||    
T  9098671 acaccttcttgaa---tggcagatagtgcattgtgattggctgctctttattcttaaagaattcttgatgttat 9098741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 39873293 - 39873455
Alignment:
Q  158 ggaaaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaa 257  Q
    |||||||| |||||| | | |||| || |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  39873293 ggaaaatgttaaccattgcctttgaggtattgaataaaggaacaaaaatagaaattttatgttggaaaatgataaaaagtagtcaagtcaacttgtaaaa 39873392  T
Q  258 agtttataaattgttgtttccaatg-taaagctgctaattttggttaccttaaccattgccct 319  Q
    | ||||||||||||||||||||||| |||| ||  |||||||||||||||||| |||||||||    
T  39873393 aatttataaattgttgtttccaatgttaaaactattaattttggttaccttaatcattgccct 39873455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 20809148 - 20808971
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| ||   || |||||||||||| |||| |||||| ||| |||||||| ||||     
T  20809148 aggaaaattttatttctctagaaaaatagcatcaagaatttttcaagatacgggtggcaagttttaattacatggtttattcgttcacttcctagttttc 20809049  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||| ||||||||||||| ||||||| | |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  20809048 agccacatctccttgaattgtggcaaataatgcattgtgattgactgctctttattcttgaagaattcttgatgttat 20808971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 2351223 - 2351358
Alignment:
Q  184 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 283  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||||| | || ||| |||||| ||||||||||| |||||||||||||||||||    
T  2351223 gcattggataaagaaacaaaaataaaaattttgtgttgaaaaatgataaaaaatggtcaagtcaacttataaaaagtttacaaattgttgtttccaatgt 2351322  T
Q  284 aaagctgctaattttggttaccttaaccattgccct 319  Q
    ||| ||  |||||||||||||||||||||| |||||    
T  2351323 aaacctattaattttggttaccttaaccatagccct 2351358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 184 - 315
Target Start/End: Complemental strand, 4551171 - 4551040
Alignment:
Q  184 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 283  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |||||| || ||| | ||||||||||||||||||||||||||||| | ||||    
T  4551171 gcattggataatggaacaaaaatagaaattttgtgttggaaaatgatgaaaagtggtcaagtcgacttgtaaaaagtttataaattgttgtttacgatgt 4551072  T
Q  284 aaagctgctaattttggttaccttaaccattg 315  Q
    ||||||  ||||||||||||||||||| ||||    
T  4551071 aaagctattaattttggttaccttaactattg 4551040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 37275260 - 37275394
Alignment:
Q  183 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatg 282  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| | || ||| |||||| ||||||||||||||||||||||||||||||    
T  37275260 ggcattggataaaggtacaaaaatagaaattttgtattggaaaatgataaaaaatggtcaagacaacttataaaaagtttataaattgttgtttccaatg 37275359  T
Q  283 taaagctgctaattttggttaccttaaccattgcc 317  Q
    |||| ||  |||||||| ||||||||| |||||||    
T  37275360 taaaactaataattttgattaccttaagcattgcc 37275394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 45010400 - 45010224
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||| |||||| |||||| |||||||||||||||||||||||| ||||| |||||||     
T  45010400 aggaagatgttatttctctagaaaaatagcataaagaatttttcaaaacacatctgacaaattttaattgcatgatttatttgttcacttcttatttttc 45010301  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||| | ||||||||  |||||| | |||| |  |||| ||||||||| |||| |||||||||| |||||||    
T  45010300 agccacaccttc-tgaattgtgacaaataatgcattatatttggatgctctttattcttaaagaattcttgatgttat 45010224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 159 - 304
Target Start/End: Original strand, 38680882 - 38681027
Alignment:
Q  159 gaaaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaa 258  Q
    |||||||||||||| | || |||||||||||||||||||||||  |||| ||||||||||||||||||| ||||||| | || |||  || |||||||||    
T  38680882 gaaaatgctaaccattgctcttggggcattggataaaggaacatcaataaaaattttgtgttggaaaataataaaaaattgtcaagttaatttgtaaaaa 38680981  T
Q  259 gtttataaattgttgtttccaatgtaaagctgctaattttggttac 304  Q
     ||||||||||||||||||||||||||| ||  |||||||||||||    
T  38680982 atttataaattgttgtttccaatgtaaaactaataattttggttac 38681027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 42480324 - 42480145
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttga--caagttttaattgcatgatttatttgttgacttcctatttt 455  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||    |  |||||||||||||||| |||||||| || | || |||||||    
T  42480324 aggaaaatgttatttctctagaaaaatagcatcaagaatttttcaagagacacagcatgcaagttttaattgcataatttatttattcattttctatttt 42480225  T
Q  456 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    | ||||||||||| ||||||||| | ||||| |||||||| ||||  |||| |||| ||||||||||||||| |||||||    
T  42480224 tcagccacacctcattgaattgtggtaaataatacattgtaattgactgctatttattcttgaagaattcttgatgttat 42480145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 183 - 310
Target Start/End: Complemental strand, 30111877 - 30111750
Alignment:
Q  183 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatg 282  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| || ||| |||||| |||||| |||| ||||||||||||| |||     
T  30111877 ggcattggataagggaacaaaaatacaaattttgtgtcggaaaatgataaaaagtggtcaagtcaacttataaaaaatttacaaattgttgtttctaata 30111778  T
Q  283 taaagctgctaattttggttaccttaac 310  Q
    |||| || ||||||||||||||||||||    
T  30111777 taaaactactaattttggttaccttaac 30111750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 186 - 320
Target Start/End: Original strand, 3077048 - 3077182
Alignment:
Q  186 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 285  Q
    |||||||||||||| ||||||| ||||||||||||||||||| ||||||||| || ||   |||||||||||| |||||||||| |||||| ||||||||    
T  3077048 attggataaaggaataaaaatagaaattttgtgttggaaaataataaaaagtggtcaaattaacttgtaaaaaatttataaattattgtttacaatgtaa 3077147  T
Q  286 agctgctaattttggttaccttaaccattgccctc 320  Q
    || | |||||||| |||||||||||||||| ||||    
T  3077148 agttactaattttagttaccttaaccattgtcctc 3077182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 419 - 534
Target Start/End: Complemental strand, 24135893 - 24135779
Alignment:
Q  419 ttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttga 517  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||  | |||||||||||| ||||||||| ||||||    
T  24135893 ttttaattgcatgatttatttgttcacttcctatttttcagccacacctccttgaattgtggcaaat--tgcattgtgattggctgctctttattcttga 24135796  T
Q  518 agaattcttcatgttat 534  Q
    ||||||||| |||||||    
T  24135795 agaattcttgatgttat 24135779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 183 - 329
Target Start/End: Original strand, 15177023 - 15177169
Alignment:
Q  183 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatg 282  Q
    |||||||||||||| |||||||||| ||||||||||||| | ||||||||||| | ||||||  |||||||||||| ||||||||| ||||||| ||||     
T  15177023 ggcattggataaagaaacaaaaataaaaattttgtgttgaacaatgataaaaaatggttaagttaacttgtaaaaaatttataaatcgttgttttcaata 15177122  T
Q  283 taaagctgctaattttggttaccttaaccattgccctcacggtaatg 329  Q
    || | ||  ||||||| |||||||||||||||| ||||| |||||||    
T  15177123 tataactattaattttagttaccttaaccattgtcctcagggtaatg 15177169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 374 - 503
Target Start/End: Original strand, 2958710 - 2958834
Alignment:
Q  374 tctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttga 473  Q
    |||||||||||| |||||||||||||||||||||||  || ||     ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  2958710 tctagaaaaataacatcaagaatttttcaagacacagctggca-----taattgcatgatttatttgttcactccctatttttcagccacacctccttga 2958804  T
Q  474 attgtagcaaatagtacattgtgattggtt 503  Q
    ||| | ||||||||| ||||||||||||||    
T  2958805 attttggcaaatagtgcattgtgattggtt 2958834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 161 - 298
Target Start/End: Original strand, 12482354 - 12482490
Alignment:
Q  161 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 260  Q
    ||||||||||||   ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||  | ||  |||||||||||||||    
T  12482354 aaatgctaaccatggcttttgggatattggataaaggaacaaaaataaaaattttgtgttggaaaatgataaaaagtgatcaaatcaacttgtaaaaagt 12482453  T
Q  261 ttataaattgttgtttccaatgtaaagctgctaatttt 298  Q
    ||| ||||||||||||  |||||||| || ||||||||    
T  12482454 tta-aaattgttgtttttaatgtaaaactactaatttt 12482490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 359 - 512
Target Start/End: Original strand, 44714807 - 44714960
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||| ||||| ||||||||||||| |||||||||||||||||| | | ||| ||||||||||||| ||||||||||| || | ||  ||||||| |    
T  44714807 ggaaaatgttatttttctagaaaaatagtatcaagaatttttcaagatatagttggcaagttttaattgtatgatttatttttttattttttatttttca 44714906  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 512  Q
    |||||| ||| ||||||||| ||||||| | |||||||||||  ||||||||||    
T  44714907 gccacatctcgttgaattgtggcaaataatgcattgtgattgactgctctttat 44714960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 26060322 - 26060163
Alignment:
Q  161 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaa----gtagttaaggcaacttgtaaa 256  Q
    |||||||||||| | |  |||| ||||||||||| | || ||||||| ||||||| || || |||||||||||||    || || ||  |||||||||||    
T  26060322 aaatgctaaccattgcccttggagcattggataa-gaaataaaaatagaaattttatgctgaaaaatgataaaaaaaaagtggtcaaatcaacttgtaaa 26060224  T
Q  257 aagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgcc 317  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  26060223 aagtttataaattgttgtttccaatgtaaaactactaattttggttaccttaaccattgcc 26060163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 358 - 466
Target Start/End: Complemental strand, 4624539 - 4624438
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||| |||||||||||||     
T  4624539 aggaaaatgctatttctctagaaaaatagcatcaagaattattcaagac-------tcaagttttaattgcatgatttatttgttcacttcctatttttc 4624447  T
Q  458 agccacacc 466  Q
    |||||||||    
T  4624446 agccacacc 4624438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 534
Target Start/End: Complemental strand, 34808134 - 34807960
Alignment:
Q  361 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 460  Q
    |||||| ||||||| |||||||||||||| |    |||||||||| |||  |  ||||||||||||||||||||||||| || ||||| ||||||| |||    
T  34808134 aaaatgttatttctttagaaaaatagcataatttttttttcaagagacaactagcaagttttaattgcatgatttatttattcacttcatatttttcagc 34808035  T
Q  461 cacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||||| |||| |   |||||||||||||||||||  ||||||||| | ||||||||||||| |||||||    
T  34808034 cacacctccttaaattatgataaatagtacattgtgattgactgctctttatttttgaagaattcttgatgttat 34807960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 362 - 430
Target Start/End: Complemental strand, 41647424 - 41647356
Alignment:
Q  362 aaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcat 430  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41647424 aaatgctatttctctagaaaaatagcatcaagaatttttcaagacacagttgacaagttttaattgcat 41647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 32512167 - 32512083
Alignment:
Q  192 taaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgttt 276  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  | ||| ||||||||||||| |||||||||||||||||    
T  32512167 taaaggaacaaaaatagaaattttgtgttggaaaatgataaaaagtgatcaagtcaacttgtaaaaattttataaattgttgttt 32512083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 183 - 330
Target Start/End: Complemental strand, 8904075 - 8903930
Alignment:
Q  183 ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatg 282  Q
    ||||||||||| | ||||||||||| ||||||||||||| |||||||||||||  |  |||  ||||||||||||| || ||||||| |||||| ||||     
T  8904075 ggcattggatatatgaacaaaaataaaaattttgtgttgaaaaatgataaaaataa--taaatcaacttgtaaaaaattaataaattattgttttcaata 8903978  T
Q  283 taaagctgctaattttggttaccttaaccattgccctcacggtaatga 330  Q
    |||||||  ||||||| ||||||||||  ||||||||||  |||||||    
T  8903977 taaagctattaatttttgttaccttaatgattgccctcagagtaatga 8903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 298
Target Start/End: Original strand, 4081205 - 4081318
Alignment:
Q  185 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgta 284  Q
    |||||||||||| |||||||||| ||||| ||||||||||| |||| |||||| || |||  || || |||||||||| ||||||||| |||||||||||    
T  4081205 cattggataaagaaacaaaaatagaaattatgtgttggaaagtgatgaaaagtggtcaagtaaatttataaaaagtttttaaattgttatttccaatgta 4081304  T
Q  285 aagctgctaatttt 298  Q
    ||  ||||||||||    
T  4081305 aaattgctaatttt 4081318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 21029421 - 21029295
Alignment:
Q  186 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 285  Q
    ||||||| ||| |||||||||| |||||  | |||||||| |||||||||||  | ||| |||||| ||||| ||||||||||| |||||| ||||||||    
T  21029421 attggatgaagaaacaaaaataaaaatt--gcgttggaaagtgataaaaagttatcaagtcaacttataaaatgtttataaattattgttttcaatgtaa 21029324  T
Q  286 agctgctaattttggttaccttaaccatt 314  Q
    | || |||||||| |||||||||| ||||    
T  21029323 aactactaatttttgttaccttaaacatt 21029295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 16109874 - 16109945
Alignment:
Q  246 caacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgcc 317  Q
    |||||||||||||||||| || ||||| ||| |||||||||||| |||||| || |||| ||||||||||||    
T  16109874 caacttgtaaaaagtttacaagttgttattttcaatgtaaagctactaattgtgtttactttaaccattgcc 16109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 500
Target Start/End: Original strand, 27143603 - 27143698
Alignment:
Q  405 acacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattg 500  Q
    ||||| ||| ||||| || |||| || || |||||||| ||||||||||||| |  |||||||| || |||||||||||||| |||||||||||||    
T  27143603 acacagttggcaagtgtttattgtattatgtatttgtttacttcctatttttcaatcacacctctttaaattgtagcaaataatacattgtgattg 27143698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 534
Target Start/End: Complemental strand, 4194891 - 4194790
Alignment:
Q  434 ttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgtt 532  Q
    ||||||||| ||||||||||||| || || | ||| ||||||| | | |||||||| ||||||||||  || |||||| ||||||||||||||| |||||    
T  4194891 ttatttgttcacttcctatttttcagtcatatctctttgaattatggtaaatagtatattgtgattgactgttctttattcttgaagaattcttgatgtt 4194792  T
Q  533 at 534  Q
    ||    
T  4194791 at 4194790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 46065379 - 46065316
Alignment:
Q  247 aacttgtaaaaagtttataaattgttgtttccaatgtaaagctgctaattttggttaccttaac 310  Q
    |||||||||||| |||| |||| |||||||||||| |||||||  |||| ||||||||||||||    
T  46065379 aacttgtaaaaaatttaaaaatcgttgtttccaatataaagctattaatcttggttaccttaac 46065316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 1270175 - 1270217
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  1270175 aatgctatatctctagaaaaataacatcaagaattcttcaaga 1270217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 4194770 - 4194812
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  4194770 aatgctatatctctagaaaaataacatcaagaattcttcaaga 4194812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 20808951 - 20808993
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  20808951 aatgctatatctctagaaaaataacatcaagaattcttcaaga 20808993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 34475903 - 34475945
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  34475903 aatgctatatctctagaaaaataacatcaagaattcttcaaga 34475945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 474 - 525
Target Start/End: Complemental strand, 41646660 - 41646608
Alignment:
Q  474 attgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattct 525  Q
    ||||| ||||||||| |||||||||||  ||||||||| ||||||||||||||    
T  41646660 attgtggcaaatagtgcattgtgattgactgctctttattcttgaagaattct 41646608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 52396574 - 52396498
Alignment:
Q  159 gaaaatgctaaccaatacttttgg-ggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaa 234  Q
    |||||||||||||| |||| |||| |||||||||||| || | ||||||| |||| | || ||| ||||||||||||    
T  52396574 gaaaatgctaaccattactattggaggcattggataaggggataaaaatagaaatatagtattgaaaaatgataaaa 52396498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 1e-58; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 356 - 534
Target Start/End: Original strand, 23991946 - 23992125
Alignment:
Q  356 ttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttt 455  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||  |||||||||||||||||||||| | |||||| |||| |||||||    
T  23991946 ttaggaaaatgctatttctctagaaacatagtatcaagaatttttcaagacacaactgacaagttttaattgcatgatatttttgttcactttctatttt 23992045  T
Q  456 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    | ||||||||||||||||||||| ||||||||| ||||||||| || ||||||||| ||||||||||||||| |||||||    
T  23992046 tcagccacacctccttgaattgtggcaaatagtgcattgtgataggctgctctttattcttgaagaattcttgatgttat 23992125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 39321278 - 39321141
Alignment:
Q  184 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaag--tagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||  ||||||||||||||||||||||||||||||||||||    
T  39321278 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaaaaatagtcaaatcaacttgtaaaaagtttataaattgttgtttccaat 39321179  T
Q  282 gtaaagctgctaattttggttaccttaaccattgccct 319  Q
    |||||||| |||||||||||||||||||||||||||||    
T  39321178 gtaaagctactaattttggttaccttaaccattgccct 39321141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 160 - 315
Target Start/End: Complemental strand, 3408321 - 3408166
Alignment:
Q  160 aaaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaag 259  Q
    ||||||||||||| | || ||||| ||||| ||||| ||||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  3408321 aaaatgctaaccattgctcttgggacattgaataaaagaacaaaaatagaaattttgtgttgaaaaatgataaaaagtagtcaagtcaacttgtaaaaag 3408222  T
Q  260 tttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattg 315  Q
    || ||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  3408221 ttaataaattgttgtttccaatgtaaagctactaattttggctaccttaaccattg 3408166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 16492022 - 16492159
Alignment:
Q  182 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  16492022 gggcattggataaaggaacaaaactagaaattttgtgttagaaaatgataaaaagtagtcaagtcaacttgtaaaaagtttataaattgttgtttccaat 16492121  T
Q  282 gtaaagctgctaattttggttaccttaaccattgccct 319  Q
    |||||| | ||||||| ||||||||||| |||||||||    
T  16492122 gtaaagttactaatttcggttaccttaatcattgccct 16492159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 161 - 316
Target Start/End: Complemental strand, 44207765 - 44207609
Alignment:
Q  161 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaa-tgataaaaagtagttaaggcaacttgtaaaaag 259  Q
    |||||||||||| | |  ||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||      
T  44207765 aaatgctaaccattgcccttgtggcattggataaaggaacaaaaatagaaattttgtgttggaaaaatgataaaaagtagtcaagtcaacttgtaaaatt 44207666  T
Q  260 tttataaattgttgtttccaatgtaaagctgctaattttggttaccttaaccattgc 316  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  44207665 tttataaattgttgtttccaatataaagctactaattttggttaccttaaccattgc 44207609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 380 - 534
Target Start/End: Original strand, 27425773 - 27425928
Alignment:
Q  380 aaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgta 479  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||||||     
T  27425773 aaaatagcatcaacaatttttcaagacacagttggcaagttttaattgcatgatttatttgttcacttcctatttttcaaccacaactccttgaattgtg 27425872  T
Q  480 gcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||| | |||||||||||  || |||||| |||| |||||||||| |||||||    
T  27425873 gcaaataatgcattgtgattgactgttctttattctttaagaattcttgatgttat 27425928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 180 - 320
Target Start/End: Complemental strand, 10981053 - 10980913
Alignment:
Q  180 tggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcca 279  Q
    |||| |||||||||||| |||||||||  |||| ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||| ||    
T  10981053 tgggtcattggataaagaaacaaaaatgaaaatgttgtgttggaaaatgataaaaagtactcaagtcaacttgtaaaaagtttataaattattgttttca 10980954  T
Q  280 atgtaaagctgctaattttggttaccttaaccattgccctc 320  Q
    |||||||| | ||||||||||||  ||||||||||||||||    
T  10980953 atgtaaagatactaattttggttgtcttaaccattgccctc 10980913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 396 - 534
Target Start/End: Complemental strand, 17612005 - 17611866
Alignment:
Q  396 tttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgt 495  Q
    ||||| ||||||||  |||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||||| | |||| |    
T  17612005 ttttttaagacacaactgacaagttttaattgtatgatttatttattcacttcctattttttagccacatctccttgaattgtggcaaataattcattat 17611906  T
Q  496 gattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||| |||||| ||||||||||||||| |||||||    
T  17611905 gattggttgttctttattcttgaagaattcttgatgttat 17611866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 36856653 - 36856516
Alignment:
Q  182 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    |||||||||||||||||||||||||| ||||| ||| || |||| |||||||||||  | ||| |||||||||||||||||| |||| ||||||||||||    
T  36856653 gggcattggataaaggaacaaaaatagaaattgtgtattagaaagtgataaaaagtgatcaagtcaacttgtaaaaagtttacaaatagttgtttccaat 36856554  T
Q  282 gtaaagctgctaattttggttaccttaaccattgccct 319  Q
     ||||| | ||||||||||||||||||| |||||||||    
T  36856553 ataaagttactaattttggttaccttaatcattgccct 36856516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 45174491 - 45174622
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 278  Q
    ||||||||||| |||||||||  || ||| ||||||||||||| ||||||||||||| | || ||| |||||||||||||||||||||||||||||||||    
T  45174491 ttggggcattgaataaaggaatgaagatagaaattttgtgttgaaaaatgataaaaattggtcaagtcaacttgtaaaaagtttataaattgttgtttcc 45174590  T
Q  279 aatgtaaagctgctaattttggttaccttaac 310  Q
    |||||||| ||  |||||||||||| ||||||    
T  45174591 aatgtaaaactattaattttggttatcttaac 45174622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 358 - 499
Target Start/End: Complemental strand, 42195578 - 42195437
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||| |||  | | ||||||||||||||||||||||||||| ||| | |||||||     
T  42195578 aggaaaatgttatttctctagaaaaataacatcaagaattttttaagatacaactaaaaagttttaattgcatgatttatttgttcactccttatttttc 42195479  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgatt 499  Q
    || |||||||||||||||||| | ||||||| ||||| ||||    
T  42195478 agacacacctccttgaattgtggtaaatagtgcattgagatt 42195437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 534
Target Start/End: Complemental strand, 22327001 - 22326882
Alignment:
Q  416 aagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttt-atct 514  Q
    ||||||||||||||||||||||||||| |||| |||||||| || ||||||||| |||||||| |||||||||||||||||||||   |||||||  |||    
T  22327001 aagttttaattgcatgatttatttgttcactttctatttttcagtcacacctccctgaattgtggcaaatagtacattgtgattgacggctctttcttct 22326902  T
Q  515 tgaagaattcttcatgttat 534  Q
    |||||||||||| |||||||    
T  22326901 tgaagaattcttgatgttat 22326882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 295
Target Start/End: Original strand, 675089 - 675222
Alignment:
Q  161 aaatgctaaccaatacttttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagt 260  Q
    |||||||||||| | |  || ||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||| || ||  ||||| |||||||||    
T  675089 aaatgctaaccattgccctttgggcattggataaagaaa-aaaaatagaaattttgtgttggaaaataataaaaagtggtcaaatcaactagtaaaaagt 675187  T
Q  261 ttataaattgttgtttccaatgtaaagctgctaat 295  Q
    |||||||||||||||| |||||||||||| |||||    
T  675188 ttataaattgttgttttcaatgtaaagctactaat 675222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 35729427 - 35729560
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatata--aattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgttt 276  Q
    ||||| ||||| ||||||||| ||||| |||  |||| ||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||| ||||||    
T  35729427 ttgggacattgaataaaggaaaaaaaaaatagaaattgtgtgttgaaaagtgataaaaagtggttaagtcaacttgtaaaaaatttataaattattgttt 35729526  T
Q  277 ccaatgtaaagctgctaattttggttaccttaac 310  Q
    |||||||||| || |||||||||||||| |||||    
T  35729527 ccaatgtaaaactactaattttggttactttaac 35729560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 358 - 500
Target Start/End: Complemental strand, 8307724 - 8307584
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaa-tttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttt 456  Q
    ||||||||| |||||||| |||||||||||||| | || ||||||||||||||  || ||| |||||| ||||||||||||||||| |||||||||||||    
T  8307724 aggaaaatgatatttctcaagaaaaatagcatcgacaaatttttcaagacacaactggcaaattttaactgcatgatttatttgttcacttcctattttt 8307625  T
Q  457 tagccacacctccttgaattgtagcaaatagtacattgtgattg 500  Q
     |||||||   ||||||||||| || |||||| |||| ||||||    
T  8307624 gagccaca---ccttgaattgtggctaatagtgcattatgattg 8307584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 5787363 - 5787235
Alignment:
Q  186 attggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaa 285  Q
    |||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||| || ||| || ||| ||||||||||| ||||| |||||| ||||||||    
T  5787363 attggatagaggaacaaaaataaaaaatttatgttggaaagtgataaaaagtggtcaagtcatcttataaaaagtttacaaattattgttttcaatgtaa 5787264  T
Q  286 agctgctaattttggttaccttaaccatt 314  Q
    | ||  ||||||||||||| |||||||||    
T  5787263 aactattaattttggttacattaaccatt 5787235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 512
Target Start/End: Complemental strand, 25686563 - 25686412
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgattt---atttgttgacttcctatttt 455  Q
    |||||||| ||||||| || |||||||| || |||||||||||||||     | |||||||||| |||| ||||||    ||||||| ||||||||||||    
T  25686563 ggaaaatgttatttctttacaaaaatagtattaagaatttttcaaga-----tcgacaagttttgattgtatgattattaatttgtttacttcctatttt 25686469  T
Q  456 ttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 512  Q
      |||||||||||||| |||||| | |||||||||||| |||||| ||| |||||||    
T  25686468 ccagccacacctccttaaattgtggtaaatagtacattatgattgattgttctttat 25686412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 24620858 - 24620778
Alignment:
Q  191 ataaaggaacaaaaatataaattttgtgttggaaaatgataaaaag-tagttaaggcaacttgtaaaaagtttataaattgt 271  Q
    ||||||||| ||||||| ||||||| |||| ||||||||||||||  |  | ||| ||||||||||||| ||||||||||||    
T  24620858 ataaaggaa-aaaaataaaaattttatgttagaaaatgataaaaaaattatcaagtcaacttgtaaaaattttataaattgt 24620778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 359 - 534
Target Start/End: Original strand, 36473048 - 36473224
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||| |    
T  36473048 ggaaaatgctatttctctagaaaaataacatcaagaatttttcaagacacaattggtaagttttaattgcatgatttatttgttcacttcctatttttca 36473147  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||||||||| ||||||  ||||||||  | ||||||||  ||||||||| ||||||||||||||| |||||||    
T  36473148 gccacacctccttaaattgtgtcaaatagtgtactgtgattgactgctctttattcttgaagaattcttgatgttat 36473224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 359 - 534
Target Start/End: Complemental strand, 41322729 - 41322553
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||| ||||| |||||||||||||      
T  41322729 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacatagttagcaagttttaattgcatgatttaattgttaacttcctatttttct 41322630  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
     ||||||||||||||||| |  |||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  41322629 accacacctccttgaattttcacaaatagtgcattgtgattgactgctctttattcttgaagaattcttgatgttat 41322553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 359 - 486
Target Start/End: Original strand, 15561913 - 15562040
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||||| ||||||||||||| |    
T  15561913 ggaaaatgctatttatctagaaaaatagcatcaagaatttttcaagatacagttggcaagttttaattgtatgatttatttgttcacttcctatttttca 15562012  T
Q  459 gccacacctccttgaattgtagcaaata 486  Q
    |||||||||||||||||||| |||||||    
T  15562013 gccacacctccttgaattgtggcaaata 15562040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 36054979 - 36055115
Alignment:
Q  178 tttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttc 277  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||  |||||||||||||||| | |||||||||||||    
T  36054979 tttggggcattggataaaggaacaaaaataaaaattttgtgttggaaagtgataaaaagtggtcaaatcaacttgtaaaaagttaacaaattgttgtttc 36055078  T
Q  278 caatgtaaagctgctaattttggttaccttaaccatt 314  Q
     ||||||||||| |||||||||||||| |||||||||    
T  36055079 taatgtaaagctactaattttggttactttaaccatt 36055115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 359 - 534
Target Start/End: Complemental strand, 39112848 - 39112672
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||||||  |||||||||||||||||| ||   |||||||||||||| ||| ||| ||||||||| |||||||||||||| |||| |||||||| |    
T  39112848 ggaaaatgctacatctctagaaaaatagcattaaatttttttcaagacacaattggcaaattttaattggatgatttatttgttcactttctatttttca 39112749  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||| |||||||||||||| | ||||||||| |||||||||||||||||||||| | ||||||||||||| |||||||    
T  39112748 gccgcacctccttgaattatggcaaatagtgcattgtgattggttgctctttatttttgaagaattcttgatgttat 39112672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 29314200 - 29314023
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||| |||  ||||||||||||||| ||||||||||  |||| ||||||||     
T  29314200 aggaaaatgctatttctctaaaaaaatagtatcaagaatttttcaagacacagttggtaagttttaattgcattatttatttgtccactttctatttttc 29314101  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    || ||||||||||| |||||| ||||||||| |||||||||||  | ||||||| |||| || ||||||| |||||||    
T  29314100 agtcacacctccttaaattgtggcaaatagtgcattgtgattgacttctctttattcttaaacaattcttgatgttat 29314023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 361 - 534
Target Start/End: Original strand, 11653712 - 11653889
Alignment:
Q  361 aaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagc 460  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||||   ||||||||||||||| ||||||||||||||| |||| || ||||| |||    
T  11653712 aaaatgctatttctctacaaaaataacatcaagaattttttaagacacggctgacaagttttaattacatgatttatttgttcacttact-tttttaagc 11653810  T
Q  461 cacacctccttgaattgtagcaaatagtacattgtgattggt----tgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||| |||||||||||| |||||||||||||| |||||| |    ||||||||| ||||||||||||||| |||||||    
T  11653811 cacacatccttgaattgtggcaaatagtacattatgattgattgactgctctttattcttgaagaattcttgatgttat 11653889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 10635965 - 10636100
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 278  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||  |||  ||||| |||||||||||| |||| ||||||||    
T  10635965 ttggggcattggataaatgaacaaaaatagaaattttgtgttgaaaaatgataaaaagtagccaagttaacttataaaaagtttattaattattgtttcc 10636064  T
Q  279 aatgtaaagctgctaattttggttaccttaaccatt 314  Q
    |||||||| || ||||||||| ||||||||||||||    
T  10636065 aatgtaaaactactaattttgattaccttaaccatt 10636100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 24286604 - 24286469
Alignment:
Q  182 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| || ||| |||||||||||| ||||| ||||| ||||||| |||    
T  24286604 gggcattggatagaggaacaaaaatagaaattttgtgttggaaagtgataaaaagtggtcaagtcaacttgtaaaatgtttagaaattattgtttctaat 24286505  T
Q  282 gtaaagctgctaattttggttaccttaaccattgcc 317  Q
     |||| || ||||||||||||||| |||||||||||    
T  24286504 ataaaactactaattttggttaccgtaaccattgcc 24286469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 355 - 461
Target Start/End: Complemental strand, 33889052 - 33888946
Alignment:
Q  355 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattt 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||||| ||| |||||||    
T  33889052 tttaggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagaaacaactgacaagttttaattgcataatttatttgttcactccctattt 33888953  T
Q  455 tttagcc 461  Q
    || ||||    
T  33888952 ttcagcc 33888946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 185 - 315
Target Start/End: Complemental strand, 44159446 - 44159316
Alignment:
Q  185 cattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgta 284  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| || | || ||||||||| ||||||||||||| || ||||||||    
T  44159446 cattggataaagtaacaaaaataaaaattttgtgttggaaaatgataaaaattagtcaaagtaatttgtaaaaaatttataaattgttattcccaatgta 44159347  T
Q  285 aagctgctaattttggttaccttaaccattg 315  Q
    |||||  ||||||| |||| |||||||||||    
T  44159346 aagctattaattttagttatcttaaccattg 44159316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 358 - 526
Target Start/End: Complemental strand, 2001848 - 2001680
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    ||||||||| |||||||||||||||||||||||||   ||||||||||||||  || |||||||||||| ||||||||||||||| |||  |||||||      
T  2001848 aggaaaatgttatttctctagaaaaatagcatcaaatttttttcaagacacagctgccaagttttaattacatgatttatttgttcactatctattttcc 2001749  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattctt 526  Q
    |||||||||||||| |||||| |||||| ||  ||| ||||||  ||||||||| |||||||||||||||    
T  2001748 agccacacctccttaaattgtggcaaatcgtgtatt-tgattgactgctctttattcttgaagaattctt 2001680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 40452018 - 40451881
Alignment:
Q  182 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    |||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| | ||  ||||||||||||| |||||||||||||||||||||     
T  40452018 gggcattggataaaggaacaaaaatggaaattttgtgttggaaagtgataaaaagtaatcaaatcaacttgtaaaaaatttataaattgttgtttccaac 40451919  T
Q  282 gtaaagctgctaattttggttaccttaaccattgccct 319  Q
     |||| || ||||||||| ||| |||||| ||| ||||    
T  40451918 ttaaaactactaattttgattatcttaacaatttccct 40451881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 34392300 - 34392132
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttt 457  Q
    |||||||||||||||||||| |||||||| || ||||||||||     || ||     ||||||||||||||||||||||||||| ||||   ||||||     
T  34392300 aggaaaatgctatttctctaaaaaaatagaattaagaatttttt----caaat-----aagttttaattgcatgatttatttgttcacttttcatttttc 34392210  T
Q  458 agccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||| ||| |||||| |||||||||||||||||||||  ||||||||| ||||||| ||||||| |||||||    
T  34392209 agccacaccttcttaaattgtggcaaatagtacattgtgattgagtgctctttattcttgaaaaattcttgatgttat 34392132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 190 - 310
Target Start/End: Complemental strand, 31452171 - 31452052
Alignment:
Q  190 gataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgtaaagct 289  Q
    |||||| ||||||||||| ||||| |||||||||||||||| |||||| || ||  ||||||| ||||| |||| ||||||||||||| |||||||||||    
T  31452171 gataaaagaacaaaaatagaaattatgtgttggaaaatgatgaaaagtggtcaaatcaacttgaaaaaa-tttacaaattgttgtttctaatgtaaagct 31452073  T
Q  290 gctaattttggttaccttaac 310  Q
      |||||||||||||||||||    
T  31452072 attaattttggttaccttaac 31452052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 412 - 534
Target Start/End: Complemental strand, 4851880 - 4851757
Alignment:
Q  412 tgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta 511  Q
    ||||||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| |||||| | ||||||| |||| ||||||  |||||||||    
T  4851880 tgacaagttttaattgcatgatttatttgtttatttcctatttttcagccacacttccttaaattgtggaaaatagtgcattatgattgactgctcttta 4851781  T
Q  512 -tcttgaagaattcttcatgttat 534  Q
     |||| || ||||||| |||||||    
T  4851780 ttcttaaaaaattcttgatgttat 4851757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 439
Target Start/End: Original strand, 37919508 - 37919588
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttattt 439  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||| | ||||||||    
T  37919508 ggaaaatgctatttctctagaaaaatagtatcaagaatttatcaaaacacagttgacaagttttaattgcgtaatttattt 37919588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 512
Target Start/End: Complemental strand, 1005793 - 1005636
Alignment:
Q  358 aggaaaatgctatttctctagaaaaa--tagcatcaagaatttttcaagacacatt-tgacaagttttaattgcatgatttatttgttgacttcctattt 454  Q
    |||||||||||||||||||| |||||  ||||||||| | ||||| ||| ||||   ||||||||||||||||||| ||||||||||| |||||||||||    
T  1005793 aggaaaatgctatttctctaaaaaaaaatagcatcaaaatttttttaaggcacaaactgacaagttttaattgcataatttatttgttcacttcctattt 1005694  T
Q  455 tttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 512  Q
    || || |||||||| || ||||||  ||||| || |||| | |||| || ||||||||    
T  1005693 ttcagtcacacctctttaaattgtgtcaaatggtgcattataattgattactctttat 1005636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 8551625 - 8551513
Alignment:
Q  423 aattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaa 521  Q
    |||||||||||||||||||| | || |||||||||| ||||| |||||| |||||| ||||| | | ||||||||||||||| |||||| ||| ||||||    
T  8551625 aattgcatgatttatttgttcattttctattttttaaccacatctcctttaattgtggcaaacaatgcattgtgattggttgttctttattctcgaagaa 8551526  T
Q  522 ttcttcatgttat 534  Q
    ||||| |||||||    
T  8551525 ttcttaatgttat 8551513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 184 - 310
Target Start/End: Complemental strand, 28280523 - 28280397
Alignment:
Q  184 gcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaatgt 283  Q
    |||||||||||  ||| |||||||||||| |||||||||||||||||||||||| || ||| |||||| || ||| |||  |||| |||||||  ||| |    
T  28280523 gcattggataagagaataaaaatataaatattgtgttggaaaatgataaaaagtggtcaagtcaacttatataaaattttaaaatcgttgtttttaatat 28280424  T
Q  284 aaagctgctaattttggttaccttaac 310  Q
    |||||  ||||||||| ||||||||||    
T  28280423 aaagcaactaattttgattaccttaac 28280397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 358 - 405
Target Start/End: Complemental strand, 4824343 - 4824296
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  4824343 aggaaaatgctatttctctagaaaaatagcattaagaatttttcaaga 4824296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 419 - 512
Target Start/End: Complemental strand, 11643423 - 11643330
Alignment:
Q  419 ttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctctttat 512  Q
    ||||||||| |||||||||||||| ||||| ||||||| | | |||| | ||| |||||| | ||||||| |||||||||||  ||||||||||    
T  11643423 ttttaattgtatgatttatttgttcacttcgtatttttcaactacactttcttaaattgtggtaaatagtgcattgtgattgactgctctttat 11643330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 520
Target Start/End: Complemental strand, 4794242 - 4794159
Alignment:
Q  438 ttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaaga 520  Q
    ||||| |||||||||||||| |||| |||||| |  ||||| ||||||||| |||||||||||| |||| |||| |||||||||    
T  4794242 ttgttcacttcctattttttggccaaacctccatatattgtggcaaatagtgcattgtgattggctgctatttattcttgaaga 4794159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 357 - 396
Target Start/End: Original strand, 13357627 - 13357666
Alignment:
Q  357 taggaaaatgctatttctctagaaaaatagcatcaagaat 396  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  13357627 taggaaaatgctatttatctagaaaaatagcatcaagaat 13357666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 407
Target Start/End: Complemental strand, 8551683 - 8551625
Alignment:
Q  352 ttatttaggaaaatgctatttctct---agaaaaatagcatcaagaatttttcaagaca 407  Q
    |||||||||||||||||||||||||   | ||||||||||| | |||||||||||||||    
T  8551683 ttatttaggaaaatgctatttctctaaaaaaaaaatagcattatgaatttttcaagaca 8551625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 500
Target Start/End: Original strand, 37919603 - 37919679
Alignment:
Q  424 attgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattg 500  Q
    ||||||||||||||||||| |||| |||||||| |  |||| |||||| ||||||  |||||| | |||||||||||    
T  37919603 attgcatgatttatttgttcacttactatttttcactcacatctccttaaattgtgacaaataatgcattgtgattg 37919679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 4851737 - 4851779
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||| |||||||||||||| |||||||||||||| ||||    
T  4851737 aatgctatatctctagaaaaataacatcaagaattttttaaga 4851779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 34392112 - 34392154
Alignment:
Q  363 aatgctatttctctagaaaaatagcatcaagaatttttcaaga 405  Q
    |||||||| |||||| ||||||| |||||||||||||||||||    
T  34392112 aatgctatatctctaaaaaaataacatcaagaatttttcaaga 34392154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 392
Target Start/End: Original strand, 1416048 - 1416081
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaa 392  Q
    |||||||| |||||||||||||||||||||||||    
T  1416048 ggaaaatgttatttctctagaaaaatagcatcaa 1416081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 3744324 - 3744361
Alignment:
Q  203 aaatataaattttgtgttggaaaatgataaaaagtagt 240  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  3744324 aaatagaaattttgtgttgaaaaatgataaaaagtagt 3744361  T

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Target: chr6 (Bit Score: 109; Significance: 1e-54; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 359 - 534
Target Start/End: Original strand, 7646773 - 7646949
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctatttttta 458  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||||||||||| | ||||||||||| |    
T  7646773 ggaaaatgctatttctctagaaaaatagtatcaggaatttttcaagacacatctggcaagttttaattgcatgatttatttgttcatttcctatttttca 7646872  T
Q  459 gccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    | ||||| |||||||||||| ||||||||| |||||||||||| ||||||||| | || |||||||||| |||||||    
T  7646873 gtcacacatccttgaattgtggcaaatagtgcattgtgattggctgctctttatttttaaagaattcttgatgttat 7646949  T

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Target: chr6; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 373 - 534
Target Start/End: Complemental strand, 25935694 - 25935532
Alignment:
Q  373 ctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttg 472  Q
    |||||||||||||||||||||||||||||||||||||  || |||||||||||| |||||||||||  || |||| |||||||| ||||||||||||||     
T  25935694 ctctagaaaaatagcatcaagaatttttcaagacacagctggcaagttttaattacatgatttattctttcactttctatttttcagccacacctcctta 25935595  T
Q  473 aattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||||  ||||||||||||| ||||| | ||||||||| ||||||| ||||||| |||||||    
T  25935594 aattgtgacaaatagtacattatgattagatgctctttattcttgaataattcttaatgttat 25935532  T

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Target: chr6; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 180 - 309
Target Start/End: Original strand, 6614878 - 6615007
Alignment:
Q  180 tggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcca 279  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||  |||||||||||||||||||||||| ||||||| |    
T  6614878 tggggcattggataaaggaacaaaaatagaaattttgtgttggaaaatgataaaaagtggtcaaatcaacttgtaaaaagtttataaattattgtttcta 6614977  T
Q  280 atgtaaagctgctaattttggttaccttaa 309  Q
     |||||| || |||||||| ||||||||||    
T  6614978 gtgtaaaactactaattttagttaccttaa 6615007  T

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Target: chr6; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 179 - 312
Target Start/End: Complemental strand, 22616977 - 22616846
Alignment:
Q  179 ttggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcc 278  Q
    |||||||||||||||||  |||||||||| |||||  ||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||    
T  22616977 ttggggcattggataaaataacaaaaatagaaatt--gtgttggaaaatgataaaaagtagtcaaatcaacttataaaaagtttataaattgttgtttcc 22616880  T
Q  279 aatgtaaagctgctaattttggttaccttaacca 312  Q
    |||||||| || || |||||||||||||||||||    
T  22616879 aatgtaaaactactcattttggttaccttaacca 22616846  T

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Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 386 - 500
Target Start/End: Original strand, 29487541 - 29487655
Alignment:
Q  386 gcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaat 485  Q
    |||||||||||||||| ||||||| |||  |||| || ||||||||||||||||||| ||| ||||||||| ||||||||||| || |||||| ||||||    
T  29487541 gcatcaagaatttttccagacacagttggtaagtgttgattgcatgatttatttgttcactccctatttttcagccacacctcatttaattgtggcaaat 29487640  T
Q  486 agtacattgtgattg 500  Q
    ||| || ||||||||    
T  29487641 agtgcaatgtgattg 29487655  T

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Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 423 - 526
Target Start/End: Original strand, 12607123 - 12607227
Alignment:
Q  423 aattgcatgatttatttgttgacttcctattttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaa 521  Q
    |||||||||||||||||||| |||| |||||||| || ||||||||||| |||||| ||||||||| || ||||||||  ||||||||| ||||||||||    
T  12607123 aattgcatgatttatttgttcactttctatttttcagtcacacctccttaaattgtggcaaatagtgcactgtgattgactgctctttattcttgaagaa 12607222  T
Q  522 ttctt 526  Q
    |||||    
T  12607223 ttctt 12607227  T

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Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 310
Target Start/End: Complemental strand, 31765904 - 31765774
Alignment:
Q  180 tggggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttcca 279  Q
    ||||| ||||||||| |||| ||||||| ||||| ||||||||| | | ||||||| | || ||  ||||||||||||||||||  |||| |||||| ||    
T  31765904 tggggtattggataagggaataaaaatagaaattctgtgttggagagtaataaaaaatggtcaaatcaacttgtaaaaagtttacgaattattgttttca 31765805  T
Q  280 atgtaaagctgctaattttggttaccttaac 310  Q
    ||||||| || ||||||||| ||||||||||    
T  31765804 atgtaaaactactaattttgattaccttaac 31765774  T

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Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 359 - 451
Target Start/End: Complemental strand, 17367016 - 17366930
Alignment:
Q  359 ggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttccta 451  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||      |||||||||||||||||  ||||||||| ||||||||    
T  17367016 ggaaaatgctatttctctagaaaaatagcatcaa-aatttttcaagacac-----gcaagttttaattgcatgcattatttgttcacttccta 17366930  T

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Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 435
Target Start/End: Original strand, 12607030 - 12607107
Alignment:
Q  359 ggaaaatgctatttctctag-aaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgattt 435  Q
    |||||||| | ||||||||| |||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  12607030 ggaaaatgttgtttctctaggaaaaatagtatcaagaattttttaagacacaattgataagttttaattgcatgattt 12607107  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 28542064 - 28541929
Alignment:
Q  182 gggcattggataaaggaacaaaaatataaattttgtgttggaaaatgataaaaagtagttaaggcaacttgtaaaaagtttataaattgttgtttccaat 281  Q
    ||||||||| |||  |||||| |||| |||| |||||||||||| |  ||||||||  | ||  |||||| | ||||||||  ||||||| |||| ||||    
T  28542064 gggcattggttaagagaacaataataaaaatattgtgttggaaagtagtaaaaagtgatgaattcaactttttaaaagtttgaaaattgtagttttcaat 28541965  T
Q  282 gtaaagctgctaattttggttaccttaaccattgcc 317  Q
    |||||  | ||| |||| ||| ||||||||||||||    
T  28541964 gtaaaattactattttttgtttccttaaccattgcc 28541929  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 455
Target Start/End: Original strand, 28898438 - 28898477
Alignment:
Q  416 aagttttaattgcatgatttatttgttgacttcctatttt 455  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  28898438 aagttttaattgcatgatttatttgttcactccctatttt 28898477  T

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Target: scaffold0002 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 534
Target Start/End: Complemental strand, 492865 - 492690
Alignment:
Q  360 gaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacacatttgacaagttttaattgcatgatttatttgttgacttcctattttttag 459  Q
    ||||||| |||||||||| |||||||||||||| | |||||||||||||    | |||||||||||||||| ||||||||||| | ||||||||||| ||    
T  492865 gaaaatgttatttctctaaaaaaatagcatcaaaattttttcaagacacgacagtcaagttttaattgcataatttatttgttcatttcctatttttcag 492766  T
Q  460 ccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    |||||||||||||||||||  ||||| || |||||||||||| ||||||||| ||||||||||||||| |||||||    
T  492765 ccacacctccttgaattgtgacaaattgtgcattgtgattggctgctctttattcttgaagaattcttgatgttat 492690  T

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Target: scaffold0132 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 452 - 534
Target Start/End: Complemental strand, 642 - 560
Alignment:
Q  452 ttttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||| |||||||||||||| |||||| ||||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  642 tttttcagccacacctccttaaattgt-gcaaatagtgcattgtgattgactgctctttattcttgaagaattcttgatgttat 560  T

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Target: scaffold0132; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 452 - 534
Target Start/End: Complemental strand, 8602 - 8520
Alignment:
Q  452 ttttttagccacacctccttgaattgtagcaaatagtacattgtgattggttgctcttta-tcttgaagaattcttcatgttat 534  Q
    ||||| |||||||||||||| |||||| ||||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||    
T  8602 tttttcagccacacctccttaaattgt-gcaaatagtgcattgtgattgactgctctttattcttgaagaattcttgatgttat 8520  T

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Target: scaffold0339 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 13443 - 13393
Alignment:
Q  358 aggaaaatgctatttctctagaaaaatagcatcaagaatttttcaagacaca 409  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  13443 aggaaaatgatatttctctagaaaaatagcatcaagaa-ttttcaagacaca 13393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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