View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13658_low_5 (Length: 358)
Name: NF13658_low_5
Description: NF13658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13658_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 6 - 188
Target Start/End: Original strand, 36943442 - 36943620
Alignment:
| Q |
6 |
aaaaaactcaaaacaagcatttgtctctatgcaatagccaacaattcacaagtgtcgctaataaattattgtctaatgttaactgattaaatcttttctc |
105 |
Q |
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| T |
36943442 |
aaaaaactcaaaacaagcatttgtctctatgcaatagccaacaattcagaagtatcgctaataaattattgtctaatgttaactaattaaatcttttctc |
36943541 |
T |
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| Q |
106 |
cctcattagcatcattcatatatatctggttcatcaagagacaattatatatgtcaatcaagaagtccaacaccatcttgaat |
188 |
Q |
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|||||||||||||||||||||| ||||||||| | |||||| || ||||||||||||||||||||| |||||||||||| |
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| T |
36943542 |
cctcattagcatcattcatataaatctggttcgttaagagaaaa----ctatgtcaatcaagaagtccaaaaccatcttgaat |
36943620 |
T |
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