View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13659_high_8 (Length: 333)

Name: NF13659_high_8
Description: NF13659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13659_high_8
NF13659_high_8
[»] chr1 (56 HSPs)
chr1 (15-164)||(47602862-47603011)
chr1 (15-164)||(24469817-24469966)
chr1 (15-165)||(32179849-32179999)
chr1 (15-166)||(36419092-36419243)
chr1 (26-164)||(7702837-7702975)
chr1 (15-164)||(37441186-37441335)
chr1 (20-164)||(35810714-35810858)
chr1 (24-164)||(25124885-25125025)
chr1 (20-164)||(50447337-50447481)
chr1 (20-155)||(7596389-7596524)
chr1 (15-166)||(46264942-46265093)
chr1 (22-164)||(42916114-42916256)
chr1 (24-164)||(15306493-15306633)
chr1 (15-155)||(20349137-20349277)
chr1 (23-164)||(7995970-7996111)
chr1 (29-165)||(15014320-15014456)
chr1 (28-164)||(45581008-45581144)
chr1 (24-155)||(28006350-28006481)
chr1 (24-157)||(19508528-19508661)
chr1 (24-164)||(23916810-23916950)
chr1 (20-164)||(29677519-29677663)
chr1 (20-155)||(20347662-20347797)
chr1 (15-166)||(38061176-38061327)
chr1 (46-164)||(14578585-14578703)
chr1 (21-155)||(40159639-40159773)
chr1 (34-164)||(44596527-44596657)
chr1 (55-164)||(12224575-12224684)
chr1 (24-157)||(31869594-31869727)
chr1 (61-122)||(35309607-35309668)
chr1 (24-165)||(43087465-43087606)
chr1 (24-164)||(24575909-24576049)
chr1 (24-164)||(39802767-39802907)
chr1 (24-164)||(42937074-42937214)
chr1 (23-154)||(5204479-5204610)
chr1 (24-155)||(23915606-23915737)
chr1 (24-158)||(31816568-31816702)
chr1 (15-156)||(45653440-45653580)
chr1 (21-164)||(15257171-15257314)
chr1 (43-165)||(7016074-7016196)
chr1 (26-164)||(47983257-47983395)
chr1 (15-164)||(21680656-21680805)
chr1 (46-158)||(15662971-15663083)
chr1 (20-164)||(27076515-27076659)
chr1 (26-158)||(14796590-14796722)
chr1 (26-158)||(14805464-14805596)
chr1 (81-164)||(7841680-7841762)
chr1 (21-166)||(7956321-7956466)
chr1 (24-97)||(13645247-13645320)
chr1 (26-166)||(14101864-14102005)
chr1 (15-164)||(36119063-36119211)
chr1 (24-100)||(14770580-14770656)
chr1 (24-108)||(48575136-48575220)
chr1 (24-158)||(3577670-3577805)
chr1 (81-164)||(6413296-6413379)
chr1 (24-102)||(51432265-51432343)
chr1 (22-164)||(30251422-30251565)
[»] chr7 (60 HSPs)
chr7 (15-165)||(5776129-5776279)
chr7 (15-164)||(37334274-37334423)
chr7 (15-164)||(5794936-5795085)
chr7 (15-164)||(665847-665996)
chr7 (15-164)||(43052868-43053017)
chr7 (15-155)||(3930725-3930865)
chr7 (15-165)||(28949757-28949907)
chr7 (15-155)||(36926995-36927135)
chr7 (15-164)||(42072079-42072228)
chr7 (15-156)||(45176241-45176382)
chr7 (15-164)||(48505795-48505937)
chr7 (15-164)||(26216268-26216410)
chr7 (61-155)||(388988-389082)
chr7 (15-164)||(20400992-20401141)
chr7 (20-164)||(7447877-7448021)
chr7 (24-164)||(3942181-3942321)
chr7 (17-91)||(15434241-15434315)
chr7 (24-165)||(33935513-33935654)
chr7 (24-164)||(44421901-44422042)
chr7 (24-164)||(22075068-22075208)
chr7 (24-153)||(10618926-10619055)
chr7 (24-164)||(11595796-11595936)
chr7 (24-164)||(33124700-33124840)
chr7 (26-166)||(33898942-33899082)
chr7 (20-155)||(18250002-18250137)
chr7 (24-155)||(45055733-45055864)
chr7 (21-158)||(26719817-26719954)
chr7 (24-164)||(222226-222366)
chr7 (24-167)||(17025358-17025501)
chr7 (24-154)||(23227009-23227139)
chr7 (24-154)||(23236162-23236292)
chr7 (22-164)||(36472442-36472584)
chr7 (15-164)||(49034224-49034373)
chr7 (24-166)||(21760581-21760723)
chr7 (24-166)||(46573610-46573752)
chr7 (32-150)||(46652647-46652765)
chr7 (20-165)||(32356962-32357107)
chr7 (24-164)||(37401566-37401706)
chr7 (24-155)||(18740227-18740358)
chr7 (24-166)||(33171532-33171674)
chr7 (20-171)||(35543549-35543697)
chr7 (34-102)||(48634462-48634530)
chr7 (24-107)||(23237574-23237657)
chr7 (46-165)||(37106853-37106972)
chr7 (24-102)||(40480112-40480191)
chr7 (20-158)||(31491816-31491954)
chr7 (15-98)||(10096467-10096550)
chr7 (24-157)||(17608717-17608847)
chr7 (20-101)||(2466579-2466661)
chr7 (46-164)||(27231539-27231657)
chr7 (15-69)||(29527382-29527436)
chr7 (15-92)||(37250030-37250107)
chr7 (24-163)||(41449756-41449884)
chr7 (87-158)||(33019369-33019440)
chr7 (14-69)||(49001081-49001136)
chr7 (126-164)||(15434312-15434350)
chr7 (26-96)||(37239840-37239910)
chr7 (24-57)||(23223561-23223594)
chr7 (24-69)||(44994059-44994104)
chr7 (15-99)||(29037845-29037929)
[»] chr4 (62 HSPs)
chr4 (15-165)||(21441572-21441722)
chr4 (15-166)||(53369863-53370014)
chr4 (15-164)||(50605999-50606148)
chr4 (15-164)||(12789552-12789701)
chr4 (15-164)||(19852969-19853118)
chr4 (15-164)||(45674826-45674975)
chr4 (15-151)||(44791256-44791392)
chr4 (15-165)||(48977567-48977717)
chr4 (15-117)||(49820973-49821075)
chr4 (20-166)||(9469773-9469919)
chr4 (20-164)||(36543777-36543921)
chr4 (21-166)||(22184500-22184645)
chr4 (20-158)||(36156300-36156438)
chr4 (23-164)||(48731173-48731314)
chr4 (24-164)||(11055226-11055366)
chr4 (15-155)||(26632927-26633067)
chr4 (20-155)||(51995074-51995209)
chr4 (259-333)||(21273861-21273935)
chr4 (15-166)||(56224136-56224287)
chr4 (24-158)||(49083240-49083374)
chr4 (15-164)||(24007903-24008052)
chr4 (26-155)||(50146927-50147056)
chr4 (24-165)||(52813601-52813742)
chr4 (20-164)||(15697083-15697227)
chr4 (15-76)||(53369679-53369740)
chr4 (24-155)||(12673037-12673168)
chr4 (20-166)||(13455697-13455843)
chr4 (19-164)||(80492-80637)
chr4 (24-164)||(6866109-6866243)
chr4 (24-167)||(46944541-46944684)
chr4 (15-169)||(1803489-1803638)
chr4 (20-158)||(32397704-32397842)
chr4 (21-155)||(40797827-40797961)
chr4 (26-164)||(48339099-48339237)
chr4 (24-166)||(52706217-52706359)
chr4 (24-164)||(55891985-55892125)
chr4 (24-163)||(7505529-7505668)
chr4 (24-163)||(19455159-19455298)
chr4 (23-158)||(27891386-27891520)
chr4 (22-164)||(51407949-51408091)
chr4 (24-165)||(49405634-49405775)
chr4 (26-166)||(52733699-52733838)
chr4 (21-96)||(25134571-25134646)
chr4 (24-147)||(48151143-48151266)
chr4 (74-164)||(28265673-28265763)
chr4 (20-98)||(43812123-43812201)
chr4 (24-102)||(44378250-44378328)
chr4 (24-100)||(22721328-22721403)
chr4 (21-155)||(9222141-9222273)
chr4 (15-121)||(5762588-5762693)
chr4 (15-121)||(5769158-5769263)
chr4 (24-164)||(9959343-9959471)
chr4 (24-66)||(16742423-16742465)
chr4 (24-66)||(38493075-38493117)
chr4 (24-165)||(48802474-48802616)
chr4 (49-102)||(13761824-13761877)
chr4 (24-128)||(24550077-24550182)
chr4 (60-164)||(38791728-38791831)
chr4 (15-66)||(41822102-41822153)
chr4 (35-121)||(5764616-5764702)
chr4 (35-121)||(5766860-5766946)
chr4 (81-158)||(9874214-9874291)
[»] chr3 (38 HSPs)
chr3 (15-164)||(32689160-32689309)
chr3 (15-155)||(41609879-41610018)
chr3 (15-155)||(23206317-23206456)
chr3 (24-155)||(39942809-39942940)
chr3 (24-165)||(52199429-52199570)
chr3 (23-164)||(39469531-39469672)
chr3 (24-164)||(9505121-9505261)
chr3 (20-164)||(39135350-39135494)
chr3 (20-164)||(46293213-46293357)
chr3 (20-164)||(54393443-54393587)
chr3 (24-164)||(19560774-19560914)
chr3 (20-164)||(33438731-33438875)
chr3 (26-164)||(25253704-25253842)
chr3 (15-164)||(44574517-44574666)
chr3 (24-164)||(12710702-12710842)
chr3 (15-155)||(52934803-52934943)
chr3 (24-165)||(30662130-30662271)
chr3 (15-156)||(18074567-18074708)
chr3 (15-94)||(50965394-50965474)
chr3 (15-94)||(51068529-51068609)
chr3 (20-155)||(20550211-20550346)
chr3 (24-155)||(26049549-26049680)
chr3 (24-155)||(28242583-28242714)
chr3 (21-164)||(40943558-40943701)
chr3 (24-101)||(5418678-5418755)
chr3 (45-154)||(30743593-30743702)
chr3 (24-76)||(52199389-52199441)
chr3 (26-101)||(28687074-28687149)
chr3 (7-69)||(53529685-53529747)
chr3 (24-154)||(1674629-1674759)
chr3 (34-164)||(55452670-55452799)
chr3 (23-132)||(15822381-15822490)
chr3 (15-158)||(26136324-26136467)
chr3 (21-96)||(54432259-54432334)
chr3 (35-120)||(36917867-36917952)
chr3 (86-155)||(45714758-45714827)
chr3 (24-120)||(1072753-1072849)
chr3 (15-59)||(37269063-37269107)
[»] chr2 (34 HSPs)
chr2 (15-169)||(33831486-33831640)
chr2 (15-164)||(27634662-27634811)
chr2 (15-164)||(36538647-36538796)
chr2 (15-164)||(41959134-41959283)
chr2 (15-152)||(34064696-34064833)
chr2 (15-155)||(26436345-26436484)
chr2 (34-154)||(33163990-33164110)
chr2 (24-164)||(3409188-3409328)
chr2 (24-155)||(44740492-44740623)
chr2 (26-158)||(24844672-24844804)
chr2 (24-164)||(11027908-11028048)
chr2 (24-155)||(30713156-30713287)
chr2 (24-120)||(2647018-2647114)
chr2 (23-158)||(11006980-11007113)
chr2 (20-164)||(40458917-40459061)
chr2 (24-164)||(34116173-34116313)
chr2 (36-155)||(41332243-41332362)
chr2 (24-102)||(9963759-9963837)
chr2 (23-120)||(13829877-13829974)
chr2 (23-164)||(27464572-27464713)
chr2 (52-164)||(27902439-27902551)
chr2 (34-101)||(2578089-2578156)
chr2 (15-94)||(38409641-38409720)
chr2 (15-120)||(14103258-14103363)
chr2 (57-157)||(35796258-35796358)
chr2 (28-158)||(17368996-17369125)
chr2 (20-98)||(19589841-19589918)
chr2 (81-155)||(20203723-20203797)
chr2 (15-50)||(33831418-33831453)
chr2 (24-66)||(40680221-40680263)
chr2 (24-69)||(39690170-39690215)
chr2 (24-100)||(1094457-1094533)
chr2 (38-154)||(17616281-17616397)
chr2 (24-100)||(18667751-18667827)
[»] chr5 (40 HSPs)
chr5 (15-164)||(27906089-27906238)
chr5 (15-158)||(18880183-18880326)
chr5 (19-165)||(29328039-29328184)
chr5 (15-164)||(31620859-31621008)
chr5 (20-164)||(38522861-38523005)
chr5 (20-164)||(3801364-3801508)
chr5 (24-164)||(15933160-15933303)
chr5 (24-164)||(1840687-1840827)
chr5 (21-158)||(19282120-19282257)
chr5 (29-158)||(31021868-31021997)
chr5 (24-164)||(20188973-20189113)
chr5 (20-164)||(27450581-27450725)
chr5 (24-164)||(41783325-41783465)
chr5 (15-154)||(39407397-39407536)
chr5 (24-154)||(14500716-14500846)
chr5 (15-166)||(34719655-34719806)
chr5 (20-164)||(10493981-10494125)
chr5 (24-164)||(26218047-26218187)
chr5 (24-164)||(27196077-27196217)
chr5 (15-166)||(26298302-26298453)
chr5 (15-154)||(26299838-26299977)
chr5 (24-154)||(39414181-39414312)
chr5 (24-155)||(20190594-20190724)
chr5 (20-155)||(32156955-32157081)
chr5 (27-165)||(32945020-32945158)
chr5 (24-120)||(11136051-11136146)
chr5 (27-155)||(34724763-34724891)
chr5 (15-165)||(34857338-34857488)
chr5 (15-164)||(19716174-19716318)
chr5 (15-102)||(34723715-34723802)
chr5 (30-145)||(40056382-40056497)
chr5 (20-154)||(2676012-2676146)
chr5 (71-164)||(43386763-43386858)
chr5 (74-165)||(5382824-5382915)
chr5 (81-168)||(10327987-10328074)
chr5 (15-90)||(39409131-39409206)
chr5 (87-165)||(28247473-28247551)
chr5 (20-158)||(17168449-17168589)
chr5 (19-102)||(1225346-1225429)
chr5 (15-100)||(30660971-30661056)
[»] scaffold0316 (1 HSPs)
scaffold0316 (15-165)||(19287-19437)
[»] chr8 (20 HSPs)
chr8 (15-155)||(11161563-11161703)
chr8 (15-164)||(453474-453623)
chr8 (20-164)||(33279977-33280121)
chr8 (24-166)||(9412522-9412664)
chr8 (24-164)||(3307934-3308074)
chr8 (20-155)||(34516134-34516269)
chr8 (24-154)||(27189092-27189222)
chr8 (61-166)||(43384831-43384936)
chr8 (24-102)||(43967510-43967588)
chr8 (20-94)||(23181151-23181225)
chr8 (24-164)||(34655035-34655175)
chr8 (24-154)||(1091727-1091857)
chr8 (15-120)||(9135943-9136048)
chr8 (61-164)||(12378389-12378492)
chr8 (24-69)||(10749314-10749359)
chr8 (28-164)||(24854603-24854739)
chr8 (64-164)||(39478090-39478190)
chr8 (24-154)||(32740639-32740769)
chr8 (133-165)||(23181246-23181278)
chr8 (35-115)||(35058318-35058398)
[»] chr6 (23 HSPs)
chr6 (15-164)||(10346712-10346861)
chr6 (15-164)||(8200633-8200771)
chr6 (15-164)||(5640252-5640401)
chr6 (21-155)||(4441310-4441444)
chr6 (20-164)||(3081718-3081862)
chr6 (20-164)||(10961796-10961940)
chr6 (21-166)||(6999264-6999409)
chr6 (33-165)||(1501857-1501989)
chr6 (21-164)||(13312019-13312164)
chr6 (24-155)||(33110458-33110589)
chr6 (20-154)||(7437300-7437434)
chr6 (24-101)||(32163541-32163618)
chr6 (24-167)||(11460011-11460146)
chr6 (34-164)||(17441168-17441298)
chr6 (24-98)||(9950826-9950900)
chr6 (28-67)||(13355722-13355761)
chr6 (24-158)||(18095519-18095653)
chr6 (24-158)||(18099816-18099950)
chr6 (20-98)||(27984956-27985034)
chr6 (36-97)||(22295928-22295989)
chr6 (24-66)||(12428887-12428929)
chr6 (24-66)||(21298913-21298955)
chr6 (20-155)||(9463363-9463498)
[»] scaffold0022 (1 HSPs)
scaffold0022 (20-155)||(124490-124625)
[»] scaffold0224 (1 HSPs)
scaffold0224 (22-164)||(7308-7450)
[»] scaffold0260 (2 HSPs)
scaffold0260 (15-155)||(11460-11600)
scaffold0260 (20-155)||(9985-10120)
[»] scaffold0171 (1 HSPs)
scaffold0171 (24-164)||(21088-21227)
[»] scaffold0204 (1 HSPs)
scaffold0204 (26-164)||(26621-26759)
[»] scaffold0223 (1 HSPs)
scaffold0223 (26-164)||(14428-14566)
[»] scaffold0025 (1 HSPs)
scaffold0025 (26-158)||(11392-11524)
[»] scaffold0954 (1 HSPs)
scaffold0954 (24-107)||(241-324)
[»] scaffold0444 (1 HSPs)
scaffold0444 (24-102)||(829-907)
[»] scaffold0135 (1 HSPs)
scaffold0135 (21-155)||(32794-32926)
[»] scaffold0192 (1 HSPs)
scaffold0192 (23-107)||(25623-25706)
[»] scaffold0063 (1 HSPs)
scaffold0063 (23-155)||(51311-51443)


Alignment Details
Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 47603011 - 47602862
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47603011 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 47602912  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47602911 agtcgaatgtcgaactataatcgagttggttcggttcattgtcagcccta 47602862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 24469966 - 24469817
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24469966 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 24469867  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  24469866 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 24469817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 32179849 - 32179999
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  32179849 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacggattaaatatcg 32179948  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  32179949 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaa 32179999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 36419092 - 36419243
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  36419092 atatgtagctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgacggattaaatatcg 36419191  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  36419192 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaat 36419243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 7702837 - 7702975
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7702837 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 7702936  T
Q  126 gaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||||||||||||||||||||||| || |||||    
T  7702937 gaactataatcgagttggttcggttcattgccagcccta 7702975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 37441335 - 37441186
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37441335 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 37441236  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||| |||||||||||||||||| ||||| |||||||||||| || |||||    
T  37441235 agttgaatgtcgaactataatctagttgattcggttcattgccagcccta 37441186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 35810714 - 35810858
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||| ||||| ||| || |||||||||||||||||||||||| | |||| || |||||||||||||||||||||| || || | |||| |||    
T  35810714 tagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcg 35810813  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||  |||||| |||||||||||||||||||||||| || |||||    
T  35810814 aattacgaactttaatcgagttggttcggttcattgccagcccta 35810858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 25125025 - 25124885
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||| ||| || ||||| |||||||||||||||||| | |||| || |||||||||||||||||||||| || || |||| | ||||||     
T  25125025 tcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattatcaaatcgaatt 25124926  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| |||||||||||||||||||||||| || |||||    
T  25124925 acgaactttaatcgagttggttcggttcattgccagcccta 25124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 50447337 - 50447481
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| |||||||| ||||||||||||||||| || |||||| | |||| || ||||||| ||||||||| |||| ||||| |||||| |||    
T  50447337 tagttcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatcg 50447436  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | | |||||||||  ||||||||||| |||||||||||| |||||    
T  50447437 agtctcgaactattttcgagttggtttggttcattgtcagcccta 50447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 7596389 - 7596524
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| || ||||||| |||||||||| ||| || || |||||| ||     
T  7596389 tagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaaccaagttcgacgaatcaattatcgaatca 7596488  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||  |||||| ||||||||||||||||||||||||    
T  7596489 aattacgaactctaatcgagttggttcggttcattg 7596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 46265093 - 46264942
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| ||  ||||||||||||||||| ||| || || |||||    
T  46265093 atatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagttcgacgaatcaattatcg 46264994  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    | ||||||  |||||  ||||||| |||||||||||||||| || |||||||    
T  46264993 aatcgaattacgaacactaatcgaattggttcggttcattgccacccctaat 46264942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 42916256 - 42916114
Alignment:
Q  22 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 121  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| || |||||||||||||||||| ||| || || |||||| |||||    
T  42916256 gttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaa 42916157  T
Q  122 tgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |  |||||  ||||||| |||||||||||||||| || |||||    
T  42916156 ttacgaacactaatcgaattggttcggttcattgccaccccta 42916114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 15306493 - 15306633
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| |||| ||||||||||||| |||||||| |||||| || |||||||||||||||||||| | ||||| |||||| |||| |     
T  15306493 tcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgaattaattatcgaatcgagtt 15306592  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     ||||||||  || |||||||||||||||||| || |||||    
T  15306593 ccgaactattgtcaagttggttcggttcattgccagcccta 15306633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 20349137 - 20349277
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||| || |||  ||||| ||||||||||| ||||| |||||    
T  20349137 atatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcg 20349236  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||| ||| |  ||||||  |||||||||||||||||||||    
T  20349237 agtcaaattttaaactatgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 7995970 - 7996111
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    |||||||| |||||||||| ||||||| ||||||||| | || |||| |  ||| ||||||| ||||||||||||||||| || || |||||| ||||||    
T  7995970 ttcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaatcaattatcgaatcgaat 7996069  T
Q  123 gtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||||||  || ||||||||||||||||||||| |||||    
T  7996070 ctcgaactattttcaagttggttcggttcattgtcaacccta 7996111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 15014320 - 15014456
Alignment:
Q  29 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 128  Q
    ||||||||| |||||| | |||||||||||||| ||||||| | |||| || |||||||||| ||||||| ||| || || |||||| ||||||  ||||    
T  15014320 ttcagctcaattaattgatgaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaa 15014419  T
Q  129 ctataatcgagttggttcggttcattgtcatccctaa 165  Q
    || |||||||||||||||||||||||| || ||||||    
T  15014420 ctctaatcgagttggttcggttcattgccaaccctaa 15014456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 45581144 - 45581008
Alignment:
Q  28 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 127  Q
    ||||| |||||||| |||| ||||||||||||| |||||||| || ||| || ||||||||||||||||||||||   ||| |||||| |||| | ||||    
T  45581144 gttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaacgagataattatcgaatcgagtttcga 45581045  T
Q  128 actataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||  || ||||||||||||||||||||| |||||    
T  45581044 actattttcaagttggttcggttcattgtcagcccta 45581008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 28006350 - 28006481
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||||||||||||||||||||  | || |||||| ||||||     
T  28006350 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 28006449  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
    |||||||||  |||||||||||||||||||||    
T  28006450 tcgaactattttcgagttggttcggttcattg 28006481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 19508528 - 19508661
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||| ||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  19508528 tcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 19508627  T
Q  124 tcgaactataatcgagttggttcggttcattgtc 157  Q
     |||||| || ||||||||  |||||||||||||    
T  19508628 ccgaactttattcgagttgtatcggttcattgtc 19508661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 23916810 - 23916950
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||   |||| || |||| ||||||||||||  | | || || |||||| ||||||     
T  23916810 tcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagtttgatgaatcaattatcgaatcgaatt 23916909  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| |||||||||||||| |||||||||||| |||||    
T  23916910 acgaactttaatcgagttggtttggttcattgtcagcccta 23916950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 29677663 - 29677519
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||||||| |||| || ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||| |  || |||| | |||    
T  29677663 tagttcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcaaatcg 29677564  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | | |||||||||  ||||||||||||||||||||| || |||||    
T  29677563 agtatcgaactattttcgagttggttcggttcattgccagcccta 29677519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 20347662 - 20347797
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||| ||| ||||||||||||||||||||||||||||||||| || |||| | |||| || ||| |||||| ||| ||||||| ||||| | |||||||     
T  20347662 tagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtca 20347761  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    ||| |  ||||||| |||||||| ||||||||||||    
T  20347762 aattttaaactatattcgagttgattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 38061327 - 38061176
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | || |||| |  ||| |||||||||| || ||||||||||| || || ||||     
T  38061327 atatttagttcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaatcaagttcaacgaatcaattatca 38061228  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    | |||||| ||| |||||  ||||||||||||||||||||| || |||||||    
T  38061227 aatcgaatctcgcactattttcgagttggttcggttcattgccagccctaat 38061176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 14578703 - 14578585
Alignment:
Q  46 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 145  Q
    |||||||||||||||||||| ||| | |||| || |||||||||||||||||||||  || || | || | ||||||  |||||| ||||||||||||||    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggtt 14578604  T
Q  146 cggttcattgtcatcccta 164  Q
    ||||||||||||| |||||    
T  14578603 cggttcattgtcagcccta 14578585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 40159773 - 40159639
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || | |||||||||||||| ||| | |  || |||||| ||||    
T  40159773 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagtccaatgaaccaattatcgaatcga 40159674  T
Q  121 atgtcgaactataatcgagttggttcggttcattg 155  Q
    || || ||||||  |||||||||||||||||||||    
T  40159673 atatcaaactattttcgagttggttcggttcattg 40159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 44596527 - 44596657
Alignment:
Q  34 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 133  Q
    |||||||| |||||||||||||||||||| |||||| |||||| || |||||||||||||| |||||||  |||| | |||| |||| |  | ||||||     
T  44596527 ctcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactatt 44596626  T
Q  134 atcgagttggttcggttcattgtcatcccta 164  Q
     ||||||||||||||||||||| || |||||    
T  44596627 gtcgagttggttcggttcattgccagcccta 44596657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 12224684 - 12224575
Alignment:
Q  55 attttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcatt 154  Q
    ||||||||||||||| | |||| || ||||||||||||||||||||||  |||| | |||| ||||||  ||||||||  ||||||||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  155 gtcatcccta 164  Q
    |||| |||||    
T  12224584 gtcagcccta 12224575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 31869594 - 31869727
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||| | |||| || ||||||||||||||||||||||  |||| | |||| || | |     
T  31869594 tcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacgatttaattgtcgaatcaagtt 31869693  T
Q  124 tcgaactataatcgagttggttcggttcattgtc 157  Q
     ||||||||  |||| || |||||||||||||||    
T  31869694 ccgaactattgtcgaattagttcggttcattgtc 31869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 35309607 - 35309668
Alignment:
Q  61 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35309607 agctcaagttcagctcgtgaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 35309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 43087606 - 43087465
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| ||||||||||||||||||||||| || || |||||| | ||||||| |||||||||||||||||||||  | ||| || |||||||| |     
T  43087606 tcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaacaaactaattaccgagtcgagtt 43087507  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
     |||||| || || |||||  || ||||||||||| ||||||    
T  43087506 ccgaactttattcaagttgtatcagttcattgtcagccctaa 43087465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 24575909 - 24576049
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  |||||||| ||||| | ||||||||||| ||||||| |   || || ||||||||||||||||||||||  | || |||||| || |||     
T  24575909 tcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatc 24576008  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  24576009 tcgaactattttcgagttggttcggttcattgtcagcccta 24576049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 39802907 - 39802767
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||| |  ||| || ||||||||||||| |||||||| ||||| |  |||  ||| |     
T  39802907 tcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaattaactgccgaaccgagtc 39802808  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||  ||||||||||||| ||||||| || |||||    
T  39802807 tcgaactattttcgagttggttcgattcattgccagcccta 39802767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 42937074 - 42937214
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||| ||| || |||||||||||||| ||||||||| | |||| || | |||||||||||||||| ||| || || | | || ||||||     
T  42937074 tcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagttcgacgaatcaattgttgaatcgaatt 42937173  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| ||||||||||||||| |||||||| || |||||    
T  42937174 acgaactctaatcgagttggttcagttcattgccagcccta 42937214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 5204610 - 5204479
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    |||||||||  |||||||| ||||||||||||||||||| ||||||| |  ||| || |||||| |||||||||||||||  | || |||||| ||||||    
T  5204610 ttcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacgagtcaattatcgaatcgaat 5204511  T
Q  123 gtcgaactataatcgagttggttcggttcatt 154  Q
     || ||||||  ||||||||||||| ||||||    
T  5204510 ctcaaactattttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 23915737 - 23915606
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||| |||| ||||||||||||||||| |||| |||||| || ||||||||||||||||||||||   ||| | | || |||| |     
T  23915737 tcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacgagataattgttgaatcgagtt 23915638  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
    ||||||| |  ||||||||||||| |||||||    
T  23915637 tcgaacttttgtcgagttggttcgattcattg 23915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 31816568 - 31816702
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| || |||| ||||||||||  || |||| || ||| || |||||||||||||||||||||| || || || ||| | || |     
T  31816568 tcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaacgaatcaattaccgaattgagtt 31816667  T
Q  124 tcgaactataatcgagttggttcggttcattgtca 158  Q
    |||||||||  ||||||||||||||||||||||||    
T  31816668 tcgaactattttcgagttggttcggttcattgtca 31816702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 45653580 - 45653440
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||||| |||||| |||||||  |||||||||||| ||| ||||||||| | |||| || |||||||||||||||||||||| | ||| | |||    
T  45653580 atatatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaacgaaataattgtcg 45653481  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgt 156  Q
    | |||| | | |||||||  ||||||||| ||||||||||||    
T  45653480 aatcgagttttgaactattttcgagttgg-tcggttcattgt 45653440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 15257314 - 15257171
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    ||||||| |||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||||| ||||    
T  15257314 agttcaaattcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcga 15257215  T
Q  121 atgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     | || ||||||  | |||||||||||||||||||||| |||||    
T  15257214 gtatcaaactatttttgagttggttcggttcattgtcagcccta 15257171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 165
Target Start/End: Complemental strand, 7016196 - 7016074
Alignment:
Q  43 ttaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttg 142  Q
    ||||| |||||| |||| ||||||||| |||||| || |||||||||||||||||||||  || || | |||| |||| | ||||| | |  ||||||||    
T  7016196 ttaacaaacttagttttgagctcaagttcagctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttg 7016097  T
Q  143 gttcggttcattgtcatccctaa 165  Q
    |||||||||||||||| ||||||    
T  7016096 gttcggttcattgtcagccctaa 7016074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 47983257 - 47983395
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    ||||||| |||||||| |||||||  |||  ||| | ||||||| |  ||| || ||||| |||||||||||||||  || || |||||| |||||| ||    
T  47983257 aagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgaatctc 47983356  T
Q  126 gaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||  |||||||||||||||||||||||| |||||    
T  47983357 gaactattttcgagttggttcggttcattgtcaacccta 47983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 21680805 - 21680656
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||||| | |||||| || ||||  |||||||||||||||| ||||||||| | |||| ||   ||||| ||||||||||||||   ||| |||||    
T  21680805 atatgtagtttatgttcagttcgtttagctaacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcg 21680706  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | |||| | |||||||||  ||||| ||||||||||||||| || |||||    
T  21680705 aatcgagtttcgaactattttcgagctggttcggttcattgccaacccta 21680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 15662971 - 15663083
Alignment:
Q  46 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 145  Q
    |||||||||||||||||||||||| | |||| || ||| |||||||||||||| ||| || || ||| || | ||||  | |||| |||| |||||||||    
T  15662971 acgaacttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaatcaattattgaattgaattacaaactctaattgagttggtt 15663070  T
Q  146 cggttcattgtca 158  Q
    |||||||||||||    
T  15663071 cggttcattgtca 15663083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 27076659 - 27076515
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| ||| |||| ||||||||||||| ||| ||||||||| | |||| ||  ||||||| ||||||||||||| ||||| |||||| ||     
T  27076659 tagttcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattatcgaatca 27076560  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | | |  ||||||  || |||||||||  |||||||||| |||||    
T  27076559 agtcttaaactattttcaagttggttcaattcattgtcagcccta 27076515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 14796590 - 14796722
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    ||||||| |||||||| ||||||||||||||||  || |||||| || ||   | ||||||||||||| |||||||| ||||| ||||||||| | |  |    
T  14796590 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttcc 14796689  T
Q  126 gaactataatcgagttggttcggttcattgtca 158  Q
    ||||| | |||||||| | |||||| |||||||    
T  14796690 gaactttgatcgagttagctcggtttattgtca 14796722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 14805464 - 14805596
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    ||||||| |||||||| ||||||||||||||||  || |||||| || ||   | ||||||||||||| |||||||| ||||| ||||||||| | |  |    
T  14805464 aagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttcc 14805563  T
Q  126 gaactataatcgagttggttcggttcattgtca 158  Q
    ||||| | |||||||| | |||||| |||||||    
T  14805564 gaactttgatcgagttagctcggtttattgtca 14805596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 7841680 - 7841762
Alignment:
Q  81 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||||||||||||||| ||||| |||||| |||| | ||||| |||  ||||||||||||||||||||| || |||||    
T  7841680 ggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcccta 7841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 7956321 - 7956466
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||||| |||||||| ||||| | |||||||||||  |||||| |  ||  ||  ||||||||||||||| ||| | |  || |||||| | ||    
T  7956321 agttcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaatgaaccaattatcgaattga 7956420  T
Q  121 atgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
     | |||||||||  ||||||||||||||||||||| || |||||||    
T  7956421 gtatcgaactattttcgagttggttcggttcattgccaaccctaat 7956466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 13645320 - 13645247
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagtt 97  Q
    |||| |||| |||||||| |||||||||||||| || ||||||||| | ||||||| | |||||||||||||||    
T  13645320 tcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaaccaagtt 13645247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 166
Target Start/End: Original strand, 14101864 - 14102005
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaatttt-cagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 124  Q
    |||||| |||| |||| |||||||| |||||||| |||||||| | |||||| || ||||||||||| |||||||| |   ||| | |||| |||| | |    
T  14101864 aagttcggctcgtttatttaacgaatttaatttttcagctcaaattcagctcatttggttcatgaactaagttcaatgagataattgtcgaatcgagttt 14101963  T
Q  125 cgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
     ||||||| ||| ||||||||||| ||||||||  |||||||    
T  14101964 ggaactattatcaagttggttcggatcattgtcggccctaat 14102005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 36119063 - 36119211
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||||||||||||||| |||| ||||| ||||| ||||  | ||||||| ||| || || ||||||| |||||||||| |||    || | |||    
T  36119063 atatatagttcaagttcagctcgtttagttaacaaacttcatttgaa-ctcaagttcagttcatttggttcataaaccaagttcgacgagaaaattgtcg 36119161  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | |||||| |||||||||  |  ||||||||||||||||||||| |||||    
T  36119162 aatcgaatttcgaactattttttagttggttcggttcattgtcagcccta 36119211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 14770656 - 14770580
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 100  Q
    |||||||||||||| ||| || |||||||||||||| || |||||| | |||| || ||||||| ||||||||||||    
T  14770656 tcaagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaa 14770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 48575220 - 48575136
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaa 108  Q
    ||||||||| |||||||| || |||||||||||||| |  |||||| |   ||||| |||||||||||||||||||||| |||||    
T  48575220 tcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaacgaattaa 48575136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 3577670 - 3577805
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaag-tccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    |||||||||||||||||| |||||||| | | ||||||||||||| |  |  || || | ||||||||||||||||||||  |||| | |||| |||| |    
T  3577670 tcaagttcagctcatttatttaacgaattaatttttcagctcaagttttaattcatttgattcatgaaccaagttcaacgagttaactgtcgaatcgagt 3577769  T
Q  123 gtcgaactataatcgagttggttcggttcattgtca 158  Q
      | ||||||  ||||||| ||||||||||||||||    
T  3577770 tccaaactattgtcgagttagttcggttcattgtca 3577805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 6413296 - 6413379
Alignment:
Q  81 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||| |||||||| || || |||| | |||||| |||||||||  ||||||||||||| ||||||| || |||||    
T  6413296 ggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgccagcccta 6413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 51432343 - 51432265
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 102  Q
    |||||||||||| ||||| |||||||  ||||||||||||| || | || ||| || |||||||||||||||| |||||    
T  51432343 tcaagttcagctaatttatttaacgattttaattttcagcttaatttcaactcatttggttcatgaaccaagtacaacg 51432265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 30251422 - 30251565
Alignment:
Q  22 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 121  Q
    ||||||||||||   ||||| ||||||||||||||||| ||||||||| ||  || ||  |||||||||||||  ||||||  |||| |||||| || |     
T  30251422 gttcaagttcaggaaatttagttaacgaacttaatttttagctcaagttcaattcatttagttcatgaaccaaactcaacgagttaattatcgaatcaag 30251521  T
Q  122 tgtcgaactat-aatcgagttggttcggttcattgtcatcccta 164  Q
    | | |||||||   |||| |||||| |||||||||||| |||||    
T  30251522 ttttgaactatgtttcgaattggtttggttcattgtcaacccta 30251565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 5776279 - 5776129
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5776279 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 5776180  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  5776179 agtcgaatgtcgaactataatcgagttggttcggttcattgccaaccctaa 5776129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 37334274 - 37334423
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37334274 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 37334373  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  37334374 aatcgaatgtcgaactataatcgagttggttcggttcattgtcaacccta 37334423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 5795085 - 5794936
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5795085 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 5794986  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  5794985 agtcgaatgtcgaactataatcgggttggttcggttcattgccagcccta 5794936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 665996 - 665847
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  665996 atatgtagctcaaattcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaatttaacggattaaatatcg 665897  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  665896 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 665847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 43052868 - 43053017
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43052868 atatgtagctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaacggattaaatatcg 43052967  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  43052968 agtcgaatgtcgaactataatcgagttggttcggttcattgccaacccta 43053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 3930865 - 3930725
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  3930865 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatggaccaagttcaacggattagatatcg 3930766  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  3930765 agtcgaatgtcgaactataatcgagttgtttcggttcattg 3930725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 28949907 - 28949757
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  28949907 atatgtagctcaagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaaccaagttcaacggattagatatcg 28949808  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  28949807 agtcgaatgtcgaactataatcgagttgattcggttcattgccagccctaa 28949757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 36926995 - 36927135
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36926995 atatgtagctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcg 36927094  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36927095 agtcgaatgtcgaactataatcgagttggttcggttcattg 36927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 42072079 - 42072228
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  42072079 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcg 42072178  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | ||||||||| |||||||||||||||| |||||| |||||||| |||||    
T  42072179 aatcgaatgtcaaactataatcgagttgtttcggtacattgtcagcccta 42072228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 45176241 - 45176382
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  45176241 atatgtagctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaacggattaattatcg 45176340  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgt 156  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  45176341 agtcgaatgtcaaactataatcgagtttgttcggttcattgt 45176382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 48505937 - 48505795
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |    
T  48505937 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaacggattagatattg 48505838  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |       |||||||||||||||||||||||||||||||||||| |||||    
T  48505837 a-------gtcgaactataatcgagttggttcggttcattgtcagcccta 48505795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 26216268 - 26216410
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26216268 atatgtagctcaagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgttaggttcataaaccaagttcaacggattaaatatcg 26216367  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
           || |||||||||||| |||||||||||||||||| || |||||    
T  26216368 -------tgacgaactataatcaagttggttcggttcattgccagcccta 26216410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 388988 - 389082
Alignment:
Q  61 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  388988 agctcaagttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattg 389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 20400992 - 20401141
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||  ||||||||||||||||||||||| ||||||||| || ||||||||| ||| ||  |||||||||||||||| ||||| ||| ||| || ||    
T  20400992 atatgtaactcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaaccaaattcaatggactaattaccg 20401091  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  20401092 agtcgaatttcgaactatattcgagttggttcggttcattgtcaacccta 20401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 7447877 - 7448021
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| | |  || | ||||||||    
T  7447877 tagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcg 7447976  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||   |||||||| |||||||||||||||||||||||| |||||    
T  7447977 aattatgaactatattcgagttggttcggttcattgtcagcccta 7448021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 3942181 - 3942321
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||  | || || |||||||||||||||||||| | || || | |||| ||||||     
T  3942181 tcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcatttggttcatgaaccaagttcaatgaatcaactgtcgaatcgaatt 3942280  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| ||||||||||||||||||||||||||| |||||    
T  3942281 acgaactttaatcgagttggttcggttcattgtcagcccta 3942321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 15434241 - 15434315
Alignment:
Q  17 atgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 91  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15434241 atgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 15434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 33935513 - 33935654
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||| |||||| |||| |     
T  33935513 tcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattatcgaatcgagtc 33935612  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
     | ||||||  ||||||||||||| ||||||| || ||||||    
T  33935613 ccaaactattgtcgagttggttcgattcattgccagccctaa 33935654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 44422042 - 44421901
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaa-ttttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||  |||| | |||| |||| |    
T  44422042 tcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagt 44421943  T
Q  123 gtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
      | ||||||  ||||||||||||||||||||| || |||||    
T  44421942 cccaaactattgtcgagttggttcggttcattgacagcccta 44421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 22075068 - 22075208
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| || ||||| ||||||| ||||||||  |||| | |||| |||| |     
T  22075068 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacgagttaattgtcgaatcgagtt 22075167  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
       |||||| |||||||||||||||||||||| || |||||    
T  22075168 ctaaactattatcgagttggttcggttcattgccagcccta 22075208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 10618926 - 10619055
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||  |||| | |||| |||| |     
T  10618926 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 10619025  T
Q  124 tcgaactataatcgagttggttcggttcat 153  Q
     | ||||||  |||||||| ||||||||||    
T  10619026 ccaaactattgtcgagttgattcggttcat 10619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 11595936 - 11595796
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||| ||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  11595936 tcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 11595837  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| || ||||||||  |||||||||||||| |||||    
T  11595836 ccgaactttattcgagttgtatcggttcattgtcagcccta 11595796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 33124700 - 33124840
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||  || || ||||||| ||||||||||||||  |||| | |||| |||| |     
T  33124700 tcaaattcagctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtt 33124799  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    || ||||||  ||||||||||||||||||||| || |||||    
T  33124800 tcaaactattgtcgagttggttcggttcattgccagcccta 33124840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 33899082 - 33898942
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | | ||| | |||| |||||| ||    
T  33899082 aagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatc 33898983  T
Q  126 gaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    |||||||  |||||||||||||||||||||||| |||||||    
T  33898982 gaactattttcgagttggttcggttcattgtcagccctaat 33898942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 18250137 - 18250002
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| |||||||| ||||||| | ||||||||| ||||||| |  ||| || |||||||||||||||||||||| || || |||||| |||    
T  18250137 tagttcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcg 18250038  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    | | | |||||||  |||||||||||||||||||||    
T  18250037 agtcttgaactattttcgagttggttcggttcattg 18250002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 45055733 - 45055864
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  45055733 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 45055832  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
     |||||| || ||||||||  |||||||||||    
T  45055833 ccgaactttattcgagttgtatcggttcattg 45055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 26719817 - 26719954
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||||| ||||    
T  26719817 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcga 26719916  T
Q  121 atgtcgaactataatcgagttggttcggttcattgtca 158  Q
     | |||||||||  ||||||||||||| ||||||||||    
T  26719917 gtatcgaactattttcgagttggttcgattcattgtca 26719954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 222366 - 222226
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||| ||||||||| |||||||||||||| |||||||  |||| | |||| || | |     
T  222366 tcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtc 222267  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     | ||||||  ||||||||||||||||||||| || |||||    
T  222266 ccaaactattgtcgagttggttcggttcattgccagcccta 222226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 17025501 - 17025358
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| ||||||||||||||||  | || |||||| |||||      
T  17025501 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaacc 17025402  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaata 167  Q
    | |||||||  |||||||||||||||||||||||| ||||||||    
T  17025401 ttgaactattttcgagttggttcggttcattgtcagccctaata 17025358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 23227139 - 23227009
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || | |||||| ||||||||||||    ||| | |||| |||| |     
T  23227139 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtt 23227040  T
Q  124 tcgaactataatcgagttggttcggttcatt 154  Q
    |||||||||  |||||||||||||| |||||    
T  23227039 tcgaactattgtcgagttggttcggatcatt 23227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 23236292 - 23236162
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || | |||||| ||||||||||||    ||| | |||| |||| |     
T  23236292 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtt 23236193  T
Q  124 tcgaactataatcgagttggttcggttcatt 154  Q
    |||||||||  |||||||||||||| |||||    
T  23236192 tcgaactattgtcgagttggttcggatcatt 23236162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 36472442 - 36472584
Alignment:
Q  22 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 121  Q
    ||||||||||| || ||||| ||||||| ||||||||||| ||||||| | |||| || |||||||||||||||||||||| || |  |||||| ||||     
T  36472442 gttcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaacgaatcatttatcgaatcgag 36472541  T
Q  122 tgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | || |  |||  |||||||||||||||||||||||| |||||    
T  36472542 tatcaagttattttcgagttggttcggttcattgtcagcccta 36472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 49034373 - 49034224
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||||||||||||  |||||||| || |||| ||||||||||| ||||||| |  ||| || |||||||||||||||||||||| |  || || ||    
T  49034373 atatgtagttcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccg 49034274  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | |||||| |||||||||  ||||||||| ||||||| ||| || |||||    
T  49034273 aatcgaatttcgaactattttcgagttggatcggttcgttgccagcccta 49034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 21760723 - 21760581
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||| |||||||  ||| |||||| ||||||| |  ||| || ||||| ||||| |||||||||| || || |||||| |||| |     
T  21760723 tcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagtt 21760624  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    |||||||||  |||||||||||||||||||| ||| |||||||    
T  21760623 tcgaactattttcgagttggttcggttcattatcagccctaat 21760581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 46573752 - 46573610
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  |||||||| ||||||| ||||||||||| || |||| |  ||| || ||||||||||||||||||||||  | || |||||| ||||||     
T  46573752 tcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 46573653  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    ||||| |||  | ||||||||||||||||||| || |||||||    
T  46573652 tcgaattatttttgagttggttcggttcattgccagccctaat 46573610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 46652765 - 46652647
Alignment:
Q  32 agctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaacta 131  Q
    |||||||||||||||| ||||||||| | || | |||| ||||   ||||||||||||||||||| |||| |||||| |||||| |||||| ||||||||    
T  46652765 agctcatttaattaacaaacttaattcttagtttaagttcagcatattaggttcatgaaccaagtccaacagattaattatcgaatcgaatttcgaacta 46652666  T
Q  132 taatcgagttggttcggtt 150  Q
    || |||| ||||| |||||    
T  46652665 tattcgaattggtccggtt 46652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 32356962 - 32357107
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||| ||||||| ||| |||| ||||||||||| ||||||| ||||| | | |||| ||  ||||||||| ||||||||||| ||||| |||||| |||    
T  32356962 tagtttaagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaattaattatcgaatcg 32357061  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    | | |||||||||  |  |||||||| |||||||||||| ||||||    
T  32357062 agtctcgaactatttttaagttggtttggttcattgtcagccctaa 32357107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 37401706 - 37401566
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||| ||||||||| ||| || |||||||||||||||| |||||||   |||| || |||||||||| ||||||||||  || || | |||| ||||||     
T  37401706 tcaacttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaacaaatcaattttcgaatcgaatt 37401607  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| ||||||| |||||| |||||||||||| |||||    
T  37401606 acgaactctaatcgaattggtttggttcattgtcagcccta 37401566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 18740358 - 18740227
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||||||||||||||| || |  | || |||| | ||||||     
T  18740358 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatc 18740259  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
    |||||||||  |||||||||||||||||||||    
T  18740258 tcgaactattttcgagttggttcggttcattg 18740227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 33171674 - 33171532
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| |||| |||||||||||| ||||||||| |||||| || ||||||| || ||||||||||    ||| | ||   |||| |     
T  33171674 tcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagttcaacaagataattgtcttatcgagtt 33171575  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    ||||||||| ||||||||||||||| |||||| || |||||||    
T  33171574 tcgaactattatcgagttggttcggatcattgccagccctaat 33171532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 35543697 - 35543549
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| |||||||| |   ||| ||||||||||| ||||||| |  ||| ||  ||||||||||||||||||||| || || |||||| | |    
T  35543697 tagttcaagttcaactcatttatt---cgagcttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatgg 35543601  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatccctaatatcca 171  Q
    | | || ||||||  ||||||||||||| |||||||||| ||||| ||||||    
T  35543600 agtctcaaactattttcgagttggttcgattcattgtcagccctactatcca 35543549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 48634462 - 48634530
Alignment:
Q  34 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 102  Q
    |||||||| ||||||||||||||||| ||||||||| || ||| || ||||||||||||||||||||||    
T  48634462 ctcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacg 48634530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 23237657 - 23237574
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 107  Q
    ||||||||| |||||||||||||||||||||||| | | ||||||| | |||  ||||||||||||||||||| ||||| ||||    
T  23237657 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaatta 23237574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 37106853 - 37106972
Alignment:
Q  46 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 145  Q
    |||||||||||||| ||||||||| | |||| || ||| ||| ||| |||||| ||| ||||| |||||| ||||||  |||||| |||| |||| ||||    
T  37106853 acgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattgagtcggtt 37106952  T
Q  146 cggttcattgtcatccctaa 165  Q
    |||||||||| || ||||||    
T  37106953 cggttcattgccaaccctaa 37106972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 40480191 - 40480112
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcg-ttaggttcatgaaccaagttcaacg 102  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||| || ||||||||||||||||||||||    
T  40480191 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttcaacg 40480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 31491816 - 31491954
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| || ||||| |||||||||||||| || || | |||| |  ||| || ||||||||   ||||||||||| ||||| |||||| |||    
T  31491816 tagttcaagttcaactaatttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtcaagttcaacgaattaattatcgaatcg 31491915  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtca 158  Q
    ||| || ||||||  | |||||| |||||||||||||||    
T  31491916 aatctcaaactatttttgagttgattcggttcattgtca 31491954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 10096467 - 10096550
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 98  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||   | |||||| || ||| || ||||||||||||||||||    
T  10096467 atatgtagtttaagttcagctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaaccaagttc 10096550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 17608717 - 17608847
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||| ||| || ||||||||||||||||| |||||| | |||| || ||||||| |||||||||| ||| || |   || || ||||||     
T  17608717 tcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatca---attgaatcgaatt 17608813  T
Q  124 tcgaactataatcgagttggttcggttcattgtc 157  Q
     |||||| | ||||||||| ||||||||||||||    
T  17608814 acgaacttttatcgagttgattcggttcattgtc 17608847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 2466661 - 2466579
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaag-tccagctcgttaggttcatgaaccaagttcaac 101  Q
    ||||| ||||| |||||||||| |||||||||| ||||||||||||||| |  ||||| ||| |||| |||||||||||||||    
T  2466661 tagtttaagtttagctcatttatttaacgaactaaattttcagctcaagttttagctcattaagttcgtgaaccaagttcaac 2466579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 27231657 - 27231539
Alignment:
Q  46 acgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 145  Q
    ||||||||||||||||| |||||| | |||| || | | |||||| ||||||| ||| || || |||||| ||||||  |||||| ||||  || |||||    
T  27231657 acgaacttaattttcagttcaagttcggctcatttgatacatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaattaagctggtt 27231558  T
Q  146 cggttcattgtcatcccta 164  Q
    ||||||||||||| |||||    
T  27231557 cggttcattgtcagcccta 27231539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 29527382 - 29527436
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagt 69  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  29527382 atatatagttcaagtttagctcatttaattaacgaacttaatttacagctgaagt 29527436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 37250030 - 37250107
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaacc 92  Q
    |||| ||||||||||| |||||| ||  |||||||| |||||||||||||||||| | |||| || ||||||| ||||    
T  37250030 atatttagttcaagtttagctcacttggttaacgaaattaattttcagctcaagtgcggctcatttggttcattaacc 37250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 41449756 - 41449884
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||| ||||| |||||||| |||||||||||||||           || || |||||||||||||||||||   ||| | |||| |||| |     
T  41449756 tcaagttcagctaatttatttaacgaatttaattttcagctca-----------tttggatcatgaaccaagttcaacgagataattgtcgaatcgagtt 41449844  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccct 163  Q
    |||||||||  |||||||||||||| ||||||||| ||||    
T  41449845 tcgaactattgtcgagttggttcggatcattgtcagccct 41449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 33019369 - 33019440
Alignment:
Q  87 tgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtca 158  Q
    |||||||||||||||| |  || |||||| |||| | |||||||||  | ||||||||||||||||||||||    
T  33019369 tgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttggttcggttcattgtca 33019440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 49001136 - 49001081
Alignment:
Q  14 aatatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagt 69  Q
    ||||| |||||||||||| | | ||||| |||||||||||||||||||| ||||||    
T  49001136 aatatatagttcaagttcggttgatttagttaacgaacttaattttcagttcaagt 49001081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 15434312 - 15434350
Alignment:
Q  126 gaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||||||||||||||||||||||| || |||||    
T  15434312 gaactataatcgagttggttcggttcattgccagcccta 15434350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 37239840 - 37239910
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagt 96  Q
    ||||||| ||||||| |||||| ||||| ||||| ||||||| | || ||| || ||||||||||||||||    
T  37239840 aagttcaactcatttgattaacaaacttgattttaagctcaaattcatctcatttggttcatgaaccaagt 37239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 23223594 - 23223561
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaatt 57  Q
    ||||||||| ||||||||||||||||||||||||    
T  23223594 tcaagttcaactcatttaattaacgaacttaatt 23223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 44994104 - 44994059
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 69  Q
    |||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  44994104 tcaaattcagctcaattagttagcgaacttaattttcagctcaagt 44994059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 29037929 - 29037845
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttca 99  Q
    |||| ||||| || |||| |||||||  |||||| |||||||||||| ||||||| |  ||| || ||||||||||| |||||||    
T  29037929 atatatagtttaaattcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaacaaagttca 29037845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 21441572 - 21441722
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21441572 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 21441671  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21441672 agtcgaatgtcgaactataatcgagttggttcggttcattgtcaaccctaa 21441722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 53369863 - 53370014
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53369863 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 53369962  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    ||| ||||||||||||||||||||||||||||||||||||| || |||||||    
T  53369963 agttgaatgtcgaactataatcgagttggttcggttcattgccagccctaat 53370014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 50605999 - 50606148
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50605999 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 50606098  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||    
T  50606099 agtcgaatgtcgaactataatcgaattggttcggttcattgccagcccta 50606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 12789701 - 12789552
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  12789701 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcg 12789602  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  12789601 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 12789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 19852969 - 19853118
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19852969 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaacggattaaatatcg 19853068  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||| ||||||||||||||||||||| ||||||| || |||||    
T  19853069 agtcgaatgtcaaactataatcgagttggttcgattcattgacagcccta 19853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 45674826 - 45674975
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  45674826 atatgtagctcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcgacggattagatatcg 45674925  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  45674926 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 45674975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 44791392 - 44791256
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  44791392 atatgtagctcaaattcagctcatttaattaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaaccaagttcaacggattagatatcg 44791293  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttc 151  Q
    |||||||||||||||||||||||||||||||||||||    
T  44791292 agtcgaatgtcgaactataatcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 48977567 - 48977717
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||    
T  48977567 atatgtagctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaacgaagttcaacgaattaaatatcg 48977666  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    |||||||||||||| |||||||||||||||||||||||||| || ||||||    
T  48977667 agtcgaatgtcgaattataatcgagttggttcggttcattgccagccctaa 48977717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 49820973 - 49821075
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49820973 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 49821072  T
Q  115 agt 117  Q
    |||    
T  49821073 agt 49821075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 9469773 - 9469919
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||   |||| || ||||||||||||||||||||  ||  || | ||||||||    
T  9469773 tagttcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatagaccaattgtcgagtcg 9469872  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    |||  ||||||||| |||||||||||||||||||||||| |||||||    
T  9469873 aattacgaactatattcgagttggttcggttcattgtcagccctaat 9469919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 36543777 - 36543921
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||  || |||||||||||||||||||| |||  || | ||||||||    
T  36543777 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagttcaatggaccaattgtcgagtcg 36543876  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||  ||||||||| |||||||||||| ||||||||||| |||||    
T  36543877 aattacgaactatattcgagttggttcagttcattgtcagcccta 36543921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 22184500 - 22184645
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||  |||| | |||| ||||    
T  22184500 agttcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcga 22184599  T
Q  121 atgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
     |  | ||||||  ||||||||||||||||||||| || |||||||    
T  22184600 gtcccaaactattgtcgagttggttcggttcattgccagccctaat 22184645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 36156438 - 36156300
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||||| | |||| || |||||| ||||||||||||||| || || | |||| |||    
T  36156438 tagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaacgaatcaattgtcgaatcg 36156339  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtca 158  Q
    |||  |||||| |||||||||||||||||||||||||||    
T  36156338 aattacgaactttaatcgagttggttcggttcattgtca 36156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 48731314 - 48731173
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |  || |||||||||||||| ||||| |||  || | |||||||||||    
T  48731314 ttcaagtacagctcatttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 48731215  T
Q  123 gtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||||||| ||||||||||||||||||||| || |||||    
T  48731214 ttcgaactatattcgagttggttcggttcattggcagcccta 48731173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 11055366 - 11055226
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| |  |||| |||||| |||| |     
T  11055366 tcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagtt 11055267  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     ||||||||  |||||||||||||||||||||||| |||||    
T  11055266 ccgaactattgtcgagttggttcggttcattgtcagcccta 11055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 26632927 - 26633067
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| || |||| |||| ||||||||||||  |||| | |||    
T  26632927 atatgtaattcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcg 26633026  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    | |||| |  |||||||| ||||||||||||||||||||||    
T  26633027 aatcgagttacgaactattatcgagttggttcggttcattg 26633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 51995074 - 51995209
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| ||| |||| ||||| ||||||||||| ||||||||| | |||| || |||||||||||||||||||||| ||||| |||||| |||    
T  51995074 tagttcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatcg 51995173  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    | | |||||||||  |||||||||||||||||||||    
T  51995174 agtctcgaactattttcgagttggttcggttcattg 51995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 21273935 - 21273861
Alignment:
Q  259 tctaatcctagtttattatactccctaatttaagatttcgaagtatttaatttatttcttgtaatacttgttata 333  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21273935 tctaatcctagtttattatactccctaatgtaagatttcgaagtatttaatttatttcttgtaatacttgttata 21273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 56224136 - 56224287
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||||||||||| || |||||||||||||| |||||||||||||||||| | |||| || |||| || |||||||||||||| ||||| | | |    
T  56224136 atatatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaattaattgttg 56224235  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    |||| | | |||||||||  | |||||||||||||||||||||| |||||||    
T  56224236 agtcaagtttcgaactatgtttgagttggttcggttcattgtcagccctaat 56224287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 49083374 - 49083240
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||| || ||| ||||||| |||||||||||||||| || ||| ||||||||| |||     
T  49083374 tcaagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaacagactaattatcgagtccaatt 49083275  T
Q  124 tcgaactataatcgagttggttcggttcattgtca 158  Q
    || ||||||  || |||||||||| ||||||||||    
T  49083274 tcaaactattctcaagttggttcgattcattgtca 49083240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 24008052 - 24007903
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||| ||||||||| |||||||| ||||||||||||||||| | |||||||  | ||||||||||||||||||||||||||||| || ||  |||     
T  24008052 atatttagctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaacgaatcaatcatca 24007953  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | |||||| |||||||||  ||||||||||||  |||||||||| |||||    
T  24007952 aatcgaatctcgaactattttcgagttggttcaattcattgtcagcccta 24007903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 155
Target Start/End: Complemental strand, 50147056 - 50146927
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    |||||||||||| ||| || |||||||||||||||||||||||||| | || || |||||||||||||||||||||| || || | |||| ||||||  |    
T  50147056 aagttcagctcaattagttcacgaacttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattac 50146957  T
Q  126 gaactataatcgagttggttcggttcattg 155  Q
    ||||| ||||||| ||||||||||||||||    
T  50146956 gaactttaatcgaattggttcggttcattg 50146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 52813601 - 52813742
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||||||  |||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||  |||| | || | | || |     
T  52813601 tcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcaaatagagtc 52813700  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
     | ||||||  |||||||||||||||||||||||| ||||||    
T  52813701 ccaaactattgtcgagttggttcggttcattgtcaaccctaa 52813742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 15697227 - 15697083
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||| |||||||||||| | ||||||||||||||||| ||||||||| |||||  || |||||||||| ||||||||||| || || | ||||||||    
T  15697227 tagttcatgttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaatcaagttcaacgaatcaattgtcgagtcg 15697128  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | | ||||||| || ||||||||  |||||||||||||| |||||    
T  15697127 agtctcgaactttattcgagttgtctcggttcattgtcagcccta 15697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 53369679 - 53369740
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 76  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53369679 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 53369740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 12673168 - 12673037
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  |||||||| |||| || ||||||||||| ||||||| |  ||| || ||||||||||||||||||||||  | || |||||| ||||||     
T  12673168 tcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 12673069  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
    |||||||||  |||||||||||||||||||||    
T  12673068 tcgaactattttcgagttggttcggttcattg 12673037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 13455697 - 13455843
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| ||| |||| ||||||||||||||||| |||||||||    ||| || ||||||| || ||||||||||| ||||| |||||| |||    
T  13455697 tagttcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcg 13455796  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    ||| || || |||  || ||||||||||||| ||||||| |||||||    
T  13455797 aatctcaaattattttcaagttggttcggtttattgtcagccctaat 13455843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 80492 - 80637
Alignment:
Q  19 gtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtc 118  Q
    ||||||||||||| ||||||||| || |||| ||||||||||| ||||||| |  ||| || |||||||||||||||||||||| |  || || ||| ||    
T  80492 gtagttcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatc 80591  T
Q  119 gaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     ||| |||||||||  ||||||||| ||||||||||| || |||||    
T  80592 aaatttcgaactattttcgagttggatcggttcattgccagcccta 80637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 6866243 - 6866109
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||| ||| || |||||||||||||||||||||||| | |||| || |||||||||||||||||  ||| || || |||||| || |       
T  6866243 tcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaatcaattatcgaatcaa--- 6866147  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
       |||| ||||||||||||||||||||||||||| |||||    
T  6866146 ---aactttaatcgagttggttcggttcattgtcaacccta 6866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 46944684 - 46944541
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  || ||||| ||||||| ||||| ||||| ||||||| |  ||| || ||||||||||||||||||||||    || |||||| ||||||     
T  46944684 tcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagccaattatcgaatcgaatc 46944585  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaata 167  Q
    |||||||||  | |||||||||||||||||||||| ||||||||    
T  46944584 tcgaactatttttgagttggttcggttcattgtcagccctaata 46944541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 169
Target Start/End: Original strand, 1803489 - 1803638
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| |||||| |||| || || ||       
T  1803489 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagtttaacgaatcaatta--- 1803585  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaatatc 169  Q
      |||||| ||| ||| |  |||||||||||||||||||||||| ||||||||||    
T  1803586 --tcgaatctcgcactcttttcgagttggttcggttcattgtcagccctaatatc 1803638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 32397842 - 32397704
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||| ||| || |||||||||||||| || |||||| | |||  || | ||||||||||||||||  || || || | ||||||||    
T  32397842 tagttcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttatttgattcatgaaccaagttcggcgaatcaattgtcgagtcg 32397743  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtca 158  Q
    |||  |||||| ||||||| ||||||||||| |||||||    
T  32397742 aattacgaactttaatcgaattggttcggtttattgtca 32397704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 40797827 - 40797961
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||||||| | |  || |||||| || |    
T  40797827 agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaatgaaccaattatcgaatcaa 40797926  T
Q  121 atgtcgaactataatcgagttggttcggttcattg 155  Q
     | |||||||||  | |||||||||||||||||||    
T  40797927 gtatcgaactatttttgagttggttcggttcattg 40797961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 164
Target Start/End: Complemental strand, 48339237 - 48339099
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    |||||||||||| ||| || |||||||||||||||||||||||| |  ||| || | |||||||||||||||||||  || |  | |||| ||||||  |    
T  48339237 aagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattac 48339138  T
Q  126 gaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||| |||| ||||||||||| |||||||||| |||||    
T  48339137 gaactctaattgagttggttcgattcattgtcagcccta 48339099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 52706217 - 52706359
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| ||||||||||||||||| |||| | ||| || |||||| | |     
T  52706217 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaacgaactaattaccgagtcaagtt 52706316  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
     |||| | || ||||||||  ||||||||||| || |||||||    
T  52706317 ccgaattttattcgagttgtatcggttcattgccagccctaat 52706359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 55892125 - 55891985
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||  || |||||||||||||| | | || || |  |||||| |||||||||||||||||||||| ||||| || ||| |||| |     
T  55892125 tcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtc 55892026  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||  | |||||||||| ||||||||||| |||||    
T  55892025 tcgaactatttttgagttggttcagttcattgtcagcccta 55891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 7505529 - 7505668
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||| |||||||| |||||||| ||||||||| | |||| || |||||||||| ||||||||||| | ||| || |||||| | |     
T  7505529 tcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaattaccgagtcaagtt 7505628  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccct 163  Q
      ||||| || ||||||||  |||||||||||||| ||||    
T  7505629 ctgaactttattcgagttgtatcggttcattgtcagccct 7505668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 19455298 - 19455159
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| ||||||||  |||| ||||||||||||| ||||||| |||||| || | |||||||||||||||||||| ||||| | || | |||| |     
T  19455298 tcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaacgaattaattgtcaaatcgagtt 19455199  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccct 163  Q
    |||||||||  |||| |  | |||||||||||||| ||||    
T  19455198 tcgaactattttcgaataagctcggttcattgtcagccct 19455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 27891386 - 27891520
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    ||||| ||||||||||||| ||||| || || ||||||||||||||| |||||| ||  |||||||||||||||||||||  |||| | |||| |||| |    
T  27891386 ttcaaattcagctcatttatttaacaaatttgattttcagctcaagttcagctcatt-tgttcatgaaccaagttcaacgagttaattgtcgaatcgagt 27891484  T
Q  123 gtcgaactataatcgagttggttcggttcattgtca 158  Q
      ||||||||  |||||||| |||| ||||||||||    
T  27891485 tccgaactattgtcgagttgattcgattcattgtca 27891520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 51408091 - 51407949
Alignment:
Q  22 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 121  Q
    ||||||||||| |||||||  || |||||||||||||| | | || || |  ||| || ||||||||||||||||| |||| ||||| || ||| ||||     
T  51408091 gttcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaattaccgaatcgag 51407992  T
Q  122 tgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | |||||||||  |||||||||||| ||||||||||| |||||    
T  51407991 tctcgaactattttcgagttggttcagttcattgtcagcccta 51407949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 49405775 - 49405634
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| || |||| ||||||||||   |||||| |  ||| || ||||||| |||||||||||||| || || || ||| |||| |     
T  49405775 tcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaacgaatcaattaccgaatcgagtt 49405676  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    |||||||||  ||| |||||||||||||||||||| ||||||    
T  49405675 tcgaactattttcgggttggttcggttcattgtcagccctaa 49405634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 166
Target Start/End: Complemental strand, 52733838 - 52733699
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    ||||||| || ||||| ||||||||||||||||||||||||| | || ||| || ||||||||||  || |||||||  |||| |||||| || ||| ||    
T  52733838 aagttcaacttatttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaacgagttaattatcgaatcaaatttc 52733740  T
Q  126 gaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    ||| ||| ||  ||||||||| ||||||||||||| |||||    
T  52733739 gaattattattaagttggttcagttcattgtcatctctaat 52733699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 25134571 - 25134646
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagt 96  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || ||||||||||||||||    
T  25134571 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 48151266 - 48151143
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  || ||||| ||||||||||||||||||||||||||| |||||| || ||||  |||||||||||||||    ||| | |||| |||| |     
T  48151266 tcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcgaatcgagtt 48151167  T
Q  124 tcgaactataatcgagttggttcg 147  Q
    |||||||||  |||||||||||||    
T  48151166 tcgaactattgtcgagttggttcg 48151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 28265763 - 28265673
Alignment:
Q  74 ctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||| |||||||||||||||||||||| ||||| || ||| |||| | |||||||||  |||||||||||| |||||||| || |||||    
T  28265763 ctcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgccagcccta 28265673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 43812201 - 43812123
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 98  Q
    |||||||||||||||||| ||| || ||||||||||||||||| | |||| | || | || ||||||||||||||||||    
T  43812201 tagttcaagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccatttggttcatgaaccaagttc 43812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 44378250 - 44378328
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 102  Q
    ||||||||| |||||||| ||||||| ||||||||||| | ||| | || ||| || ||||||||||||||||||||||    
T  44378250 tcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacg 44378328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 22721328 - 22721403
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 100  Q
    ||||||||| |||||||| ||||||||||||||||| |||| ||||    |||||| ||||||||||||||||||||    
T  22721328 tcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaaccaagttcaa 22721403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 9222273 - 9222141
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    ||||||||||||  ||||||| ||||||| |||||||| || ||||||| |  ||| || |||   |||||||||||||||| |  || | |||| ||||    
T  9222273 agttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcga 9222176  T
Q  121 atgtcgaactataatcgagttggttcggttcattg 155  Q
     | |||||||||  |||||||||||||||||||||    
T  9222175 gtatcgaactattttcgagttggttcggttcattg 9222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 5762693 - 5762588
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||| ||| ||||| |||||| |||||||| ||||||||||||||||   || ||| || |||||||||||||||||| ||| | ||||  |||    
T  5762693 atatatagttgaagctcagc-catttatttaacgaatttaattttcagctcaaactcaactcatttggttcatgaaccaagttcgacgaactaaaagtcg 5762595  T
Q  115 agtcgaa 121  Q
    |||||||    
T  5762594 agtcgaa 5762588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 5769263 - 5769158
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||| ||| ||||| |||||| |||||||| |||||||||||||||| | || | | || |||||||||||||||||| ||| | ||||  |||    
T  5769263 atatatagttgaagctcagc-catttatttaacgaatttaattttcagctcaaattcaacccatttggttcatgaaccaagttcgacgaactaaaagtcg 5769165  T
Q  115 agtcgaa 121  Q
    |||||||    
T  5769164 agtcgaa 5769158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 9959343 - 9959471
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||| ||||| ||||||||||||||||||||||||           || | ||||||||| ||||||||||  |||  ||| || |||| |     
T  9959343 tcaagttcagcttatttatttaacgaacttaattttcagctca-----------tttgattcatgaac-aagttcaacgagttatttatagaatcgagtt 9959430  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  9959431 tcgaactattgtcgagttggttcggttcattgtcagcccta 9959471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 16742465 - 16742423
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctca 66  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  16742465 tcaagttcagctcatttatttaacgaacttaattttcaactca 16742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 38493117 - 38493075
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctca 66  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  38493117 tcaagttcaactcatttaattaacaaacttaattttcagctca 38493075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 48802616 - 48802474
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgag-tcgaat 122  Q
    |||||||| ||||||||| || |||| ||||||||||  ||||||| |  ||| || |||||||||| |||||||||   | | |||| | |  |||| |    
T  48802616 tcaagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatgaatcaagttcaaaaaaatcaataaccaaatcgagt 48802517  T
Q  123 gtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
     |||||||||  |||||||||||||||||||||||| ||||||    
T  48802516 ttcgaactattttcgagttggttcggttcattgtcagccctaa 48802474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 13761824 - 13761877
Alignment:
Q  49 aacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 102  Q
    ||||||||||||||||||| | |||||| || |||||||||||||||| |||||    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacg 13761877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 24550077 - 24550182
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcat-gaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||||||| || |||  | |||| ||  || ||||||||||| || || || ||||||||||    
T  24550077 tcaagttcaactcatttagttaacaaacttaatttttagctcaagttcaactcagttggtttataaaatcaagttcaacgaatcaattaccgagtcgaat 24550176  T
Q  123 gtcgaa 128  Q
    ||||||    
T  24550177 gtcgaa 24550182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 38791728 - 38791831
Alignment:
Q  60 cagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcat 159  Q
    |||||||||| |||||| || ||||||||||||||||||||||  |||| | |||| | | ||  | ||||||  ||||||||||||||||||||| ||     
T  38791728 cagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattg-attccaaactattgtcgagttggttcggttcattgccag 38791826  T
Q  160 cccta 164  Q
    |||||    
T  38791827 cccta 38791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 41822102 - 41822153
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctca 66  Q
    |||| ||||| |||||||||||||||| ||||| ||||||||||||| ||||    
T  41822102 atatatagtttaagttcagctcatttagttaacaaacttaattttcaactca 41822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 5764702 - 5764616
Alignment:
Q  35 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 121  Q
    ||||||| |||||||| ||||||||||||||||   || ||  || |||||||||||||||||| ||| | ||||  ||||||||||    
T  5764702 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacgaactaaaagtcgagtcgaa 5764616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 5766946 - 5766860
Alignment:
Q  35 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 121  Q
    ||||||| |||||||| ||||||||||||||||   || ||  || |||||||||||||||||| ||| | ||||  ||||||||||    
T  5766946 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacgaactaaaagtcgagtcgaa 5766860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 9874291 - 9874214
Alignment:
Q  81 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtca 158  Q
    |||||||| ||||| ||||||| ||||| ||  || |||||| | |||||||  | ||||||||||||||||||||||    
T  9874291 ggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttcattgtca 9874214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 32689160 - 32689309
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32689160 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 32689259  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32689260 agtcgaatgtcgaactataatcgagttggttcggttcattgtcagcccta 32689309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 41609879 - 41610018
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41609879 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 41609978  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  41609979 agtcgaatgtcgaactataatcgagttgg-tcggttcattg 41610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 23206456 - 23206317
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||     
T  23206456 atatgtagcttaagttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcatgaacaaagttcaacagattaaatatca 23206358  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23206357 agtcgaatgtcgaactataatcgagttggttcggttcattg 23206317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 39942940 - 39942809
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||||| |  ||| ||||||     
T  39942940 tcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaacagattaattgccgaatcgaatt 39942841  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
    |||||||||| |||||||||||| ||||||||    
T  39942840 tcgaactatactcgagttggttcagttcattg 39942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 52199429 - 52199570
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| | |||| |||| |     
T  52199429 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagtc 52199528  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
     | ||||||  ||||||||||||| |||||||||| ||||||    
T  52199529 ccaaactattgtcgagttggttcgattcattgtcagccctaa 52199570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 39469672 - 39469531
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| | |||| || | |||||||||||||||||| |||  || |||||| ||||||    
T  39469672 ttcaagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaaccaagttcaatggaccaattatcgaatcgaat 39469573  T
Q  123 gtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
      ||||||||| |||||||||||| ||||||| ||| |||||    
T  39469572 tacgaactatattcgagttggttcagttcattatcagcccta 39469531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 9505261 - 9505121
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||| || ||||||||||||||||||||||  |||| | |||| |||| |     
T  9505261 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 9505162  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     ||||||||  ||||||||||||||||||||| || |||||    
T  9505161 ccgaactattgtcgagttggttcggttcattgccagcccta 9505121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 39135350 - 39135494
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| | |  || | ||||||||    
T  39135350 tagtttaagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcg 39135449  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||   |||||||| |||||||||||||||| |||| || |||||    
T  39135450 aattatgaactatattcgagttggttcggtttattgccagcccta 39135494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 46293357 - 46293213
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||| |||||  ||  || | || |||||    
T  46293357 tagtttaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcaattgaccaattgtcaagtcg 46293258  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||| | |||||||| |||||||| ||||||||||||||| |||||    
T  46293257 aattttgaactatattcgagttgattcggttcattgtcagcccta 46293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 54393587 - 54393443
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||| ||||| ||| || |||||||||||||||||||||||| | |||| || |||| ||||||||||||||||| || || | |||| |||    
T  54393587 tagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaacgaatcaattgtcgaatcg 54393488  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||  |||||| |||||||||||||||||||||||| || |||||    
T  54393487 aattacgaactttaatcgagttggttcggttcattgccagcccta 54393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 19560914 - 19560774
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| |||||| |||||| | | | ||||||| ||||| |||  ||||||||||||||||||||| ||||| | |||||||||||     
T  19560914 tcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaaccaagttcaacgaattaattgtcgagtcgaatt 19560815  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     ||||||||| ||||||||||||||||||||| || |||||    
T  19560814 ccgaactatattcgagttggttcggttcattgccagcccta 19560774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 33438875 - 33438731
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||| || |||||| ||| || |||||||||||||||||||||||| |  ||| || |||||||||||||||||||||| || || | |||| |||    
T  33438875 tagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcg 33438776  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||  | |||| ||||||||||||||||||||||||||| |||||    
T  33438775 aattacaaactttaatcgagttggttcggttcattgtcagcccta 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 25253704 - 25253842
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| |||||| || |||||||||||||||||||||   || | | ||||||||| |  |    
T  25253704 aagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagttcaacaagtttattgtcgagtcgagttcc 25253803  T
Q  126 gaactataatcgagttggttcggttcattgtcatcccta 164  Q
     ||||||| ||||||||||||||||||||| || |||||    
T  25253804 aaactatattcgagttggttcggttcattgccagcccta 25253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 44574517 - 44574666
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||| ||||||||||| ||||||||| ||||| | ||||||| |||||| ||||||||| |||| |||||||||| ||||| |  ||    
T  44574517 atatgtagctcaagttcggctcatttaataaacgaacttgatttttaactcaagttcagctcattaggttcacgaactaagttcaacgaattaattgccg 44574616  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||   |||||||||| ||||||||  ||||||||||| || |||||    
T  44574617 agtcgagcttcgaactatattcgagttgtctcggttcattgccagcccta 44574666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 12710702 - 12710842
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||||||||||||||||||||  | || |||||| ||||||     
T  12710702 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 12710801  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||  ||||||||||||||||||||| || |||||    
T  12710802 tcgaactattttcgagttggttcggttcattgccagcccta 12710842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 52934803 - 52934943
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| |  |||| |||||    
T  52934803 atatatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcg 52934902  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    | |||| |  ||||||||  || ||||||||| ||||||||    
T  52934903 aatcgagttccgaactattgtcaagttggttcagttcattg 52934943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 30662271 - 30662130
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  |||||||| ||||||| ||||||||||| ||||||| |  ||| || | ||||||||||||||||||||  | || |||||| ||||||     
T  30662271 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacgagtcaattatcgaatcgaatc 30662172  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    || ||||||  |||||||||||||| ||||||||| ||||||    
T  30662171 tcaaactattttcgagttggttcggctcattgtcagccctaa 30662130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 18074567 - 18074708
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||| |||| ||||||||||||| |||||||||||||||||||| |||| | || ||| ||  ||||||||| ||| ||||||| ||||| ||||     
T  18074567 atatatagctcaatttcagctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattatca 18074666  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgt 156  Q
    | |||| | ||||||| || ||||||||| || |||||||||    
T  18074667 aatcgagtctcgaactctattcgagttggctcagttcattgt 18074708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 50965394 - 50965474
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaa-ttttcagctcaagtccagctcgttaggttcatgaaccaa 94  Q
    |||| ||| |||||||||||||||||| ||||||||||||| |||||||||||| | |||||| |||||||||||||||||    
T  50965394 atatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaa 50965474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 51068529 - 51068609
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaa-ttttcagctcaagtccagctcgttaggttcatgaaccaa 94  Q
    |||| ||| |||||||||||||||||| ||||||||||||| |||||||||||| | |||||| |||||||||||||||||    
T  51068529 atatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaa 51068609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 20550346 - 20550211
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||| || |||||||| |||||||| |||||||||| |||| || |  ||| || ||||| |||||||||||||||  || || |||||| |||    
T  20550346 tagttcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcg 20550247  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    | | |||||||||  ||||||||||| |||||||||    
T  20550246 agtatcgaactattttcgagttggtttggttcattg 20550211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 26049680 - 26049549
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  || ||||| ||||||| ||||||||||| ||||||| |  ||| || | ||||||||||||||||||| | | || |||||| ||||||     
T  26049680 tcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatc 26049581  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
    || ||||||  |||||||||||||||||||||    
T  26049580 tcaaactattttcgagttggttcggttcattg 26049549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 28242583 - 28242714
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||| ||||||| |||||||| |||||||||||||||| | |||||| || |||||||||||||| |||||||  |||| | |||| || | |     
T  28242583 tcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtt 28242682  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
     |||| |||  |||||||| ||||||||||||    
T  28242683 ccgaattattgtcgagttgattcggttcattg 28242714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 40943558 - 40943701
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||| | ||||    
T  40943558 agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcaaatcga 40943657  T
Q  121 atgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     | |||||||||  |||||||||||||||| |||| || |||||    
T  40943658 gtatcgaactattttcgagttggttcggtttattgccagcccta 40943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 5418678 - 5418755
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 101  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| |  |||||| ||||||||||| |||||||||    
T  5418678 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaac 5418755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 30743593 - 30743702
Alignment:
Q  45 aacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggt 144  Q
    ||||||||||||| ||| ||||| | |||||| || ||||||||||||||||||||||  || |   |||||||||    ||||||||| ||||||||||    
T  30743593 aacgaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacgagttcatcttcgagtcgagctccgaactatattcgagttggt 30743692  T
Q  145 tcggttcatt 154  Q
    ||||||||||    
T  30743693 tcggttcatt 30743702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 52199389 - 52199441
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctc 76  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  52199389 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctc 52199441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 28687074 - 28687149
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 101  Q
    ||||| ||||| |||| ||||||||||||||||||||||||| |  ||| |||  |||||||||||||||||||||    
T  28687074 aagttgagctcgtttatttaacgaacttaattttcagctcaaatttagcccgtctggttcatgaaccaagttcaac 28687149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 53529747 - 53529685
Alignment:
Q  7 gtcgaagaatatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagt 69  Q
    |||||| || || |||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  53529747 gtcgaacaacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagt 53529685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 1674629 - 1674759
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||| ||||| |||||  ||  ||||||||||| |||| || ||| || |||||||||||||||||||||    ||| | | || ||||||     
T  1674629 tcaagttcagcttatttatttaacatacaaaattttcagcttaagttcaactcatttggttcatgaaccaagttcaacaagataattgttgaatcgaatt 1674728  T
Q  124 tcgaactataatcgagttggttcggttcatt 154  Q
      |||||||  ||||||||||||||||||||    
T  1674729 ctgaactattgtcgagttggttcggttcatt 1674759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 55452799 - 55452670
Alignment:
Q  34 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 133  Q
    |||||||| ||||||||||||| ||| |||| || || | |||||| |||||||||||||||||||||   | || | |||||| |||| || |||| ||    
T  55452799 ctcatttagttaacgaacttaagttttagcttaattcaa-ctcgtttggttcatgaaccaagttcaactcgtcaattgtcgagttgaatctcaaacttta 55452701  T
Q  134 atcgagttggttcggttcattgtcatcccta 164  Q
    || ||||||| || |||||||| || |||||    
T  55452700 attgagttggctcagttcattgccaacccta 55452670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 15822490 - 15822381
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    ||||||||| ||||||||| || |||| ||||||||||| ||||||| |  |||  | || ||||||||||||||||||| |  || || ||| ||||||    
T  15822490 ttcaagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacgaaacaattaccgaatcgaat 15822391  T
Q  123 gtcgaactat 132  Q
     |||||||||    
T  15822390 ttcgaactat 15822381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 26136324 - 26136467
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||||| | ||||| |||||||  ||||| ||| ||||||| | ||||||| | ||||  |  |||||| |||||||||||||  | ||| || ||    
T  26136324 atatgtagtttatgttcaactcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaaccaagttcaacaaactaattaacg 26136423  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtca 158  Q
    | |||| | || |||||| ||| |||||||| ||||||||||||    
T  26136424 aatcgagtctcaaactattatcaagttggttgggttcattgtca 26136467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 54432334 - 54432259
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagt 96  Q
    |||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||  |||||||||||||||    
T  54432334 agttcaagttcaactcatttatttaacgagcttaatttttaactcaagttcgactcatttagttcatgaaccaagt 54432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 36917952 - 36917867
Alignment:
Q  35 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||| |||||||||||||| | || || | || |||||| |||| |||||||| ||||||||  |||| | |||||||||    
T  36917952 tcatttaattcacgaacttaatttttaacttaattacaactcgttgggtttatgaaccacgttcaacgacttaattgtcgagtcga 36917867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 155
Target Start/End: Original strand, 45714758 - 45714827
Alignment:
Q  86 atgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    ||||| ||||||||||| || || | |||| ||||||  |||||| ||||||||||||||| ||||||||    
T  45714758 atgaatcaagttcaacgaatcaattgtcgaatcgaataacgaactttaatcgagttggttcagttcattg 45714827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 1072849 - 1072753
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||| |||||  |||||| |||||||||||| ||||||   || ||| || |||||||||||  ||| ||||| || || |||||||||||    
T  1072849 tcaagttcagttcattatattaacaaacttaattttcggctcaaactcaactcatttggttcatgaacttagtccaacgaatcaattatcgagtcga 1072753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 37269063 - 37269107
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaatttt 59  Q
    |||| |||||||||||||  ||||||| |||||||||||||||||    
T  37269063 atatatagttcaagttcacttcatttagttaacgaacttaatttt 37269107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 3e-70; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 15 - 169
Target Start/End: Original strand, 33831486 - 33831640
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  33831486 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaattcaacggattagatatcg 33831585  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaatatc 169  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  33831586 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaatatc 33831640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 27634662 - 27634811
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27634662 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattaaatatcg 27634761  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  27634762 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 27634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 36538647 - 36538796
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36538647 atatgtagctcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcg 36538746  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  36538747 agtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 36538796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 41959134 - 41959283
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  41959134 atatgtagcttatgttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcg 41959233  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  41959234 agtcgaatgtcgaactataatcgagttgattcggttcattgtcagcccta 41959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 34064696 - 34064833
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |    
T  34064696 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattagatattg 34064795  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttca 152  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  34064796 agtcgaatgtcgaactataattgagttggttcggttca 34064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 26436345 - 26436484
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  26436345 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaaccaagttcaacggattaaatatcg 26436444  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  26436445 agtcgaatgtc-aattataatcgagttggttcggttcattg 26436484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 34 - 154
Target Start/End: Complemental strand, 33164110 - 33163990
Alignment:
Q  34 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  134 atcgagttggttcggttcatt 154  Q
    ||||| |||||||||||||||    
T  33164010 atcgaattggttcggttcatt 33163990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 3409328 - 3409188
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | |||| |||| |     
T  3409328 tcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 3409229  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||  ||||||||||||||||||||| || |||||    
T  3409228 tcgaactattgtcgagttggttcggttcattgccagcccta 3409188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 44740623 - 44740492
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||  |||| | |||| |||| |     
T  44740623 tcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtc 44740524  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
     | ||||||  |||||||||||||||||||||    
T  44740523 ccaaactattgtcgagttggttcggttcattg 44740492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 24844804 - 24844672
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    |||||||||||||||| ||| |||| |||||||||||||||||| |||||| || ||||||||||||||||||||||   ||| |  ||| |||| | ||    
T  24844804 aagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttc 24844705  T
Q  126 gaactataatcgagttggttcggttcattgtca 158  Q
    ||||||| ||||||||||||||| |||||||||    
T  24844704 gaactattatcgagttggttcggatcattgtca 24844672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 11027908 - 11028048
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||| ||| || |||||||||||||| || |||||| | |||| || |||||||||||||||||| ||| || || |||||| | ||||     
T  11027908 tcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaattgaatt 11028007  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| |||| ||||||||||||||||||| || |||||    
T  11028008 acgaactctaattgagttggttcggttcattgccagcccta 11028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 30713156 - 30713287
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||| ||| || |||||||||| |||||||||| || | |||| || |||||||||||||||||| ||| || || |||||| ||||||     
T  30713156 tcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatt 30713255  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
     |||||  ||||||||||||||||||||||||    
T  30713256 acgaacactaatcgagttggttcggttcattg 30713287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 2647114 - 2647018
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||| | ||||||| |||||||||||||||||||||| | ||| || ||||||||    
T  2647114 tcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcga 2647018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 11007113 - 11006980
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    |||||||||| |||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||| || || |||||  ||||      
T  11007113 ttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaatcaattatcggatcga-- 11007016  T
Q  123 gtcgaactataatcgagttggttcggttcattgtca 158  Q
    ||| ||||||  ||||||||||||||||||||||||    
T  11007015 gtcaaactattttcgagttggttcggttcattgtca 11006980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 40458917 - 40459061
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||  |  || ||| || |||    
T  40458917 tagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattgaatcg 40459016  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | | || ||||||  || ||||||||||||||||||||| |||||    
T  40459017 agtatcaaactattttcaagttggttcggttcattgtcagcccta 40459061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 34116313 - 34116173
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||| ||| ||| ||||||||||||| ||||||||| | |||| || ||||||||||| |||||| ||  || || |||  | ||||||     
T  34116313 tcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaactaagttcgacaaatcaattattaaatcgaatt 34116214  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| ||||||||||||||||| |||||| || |||||    
T  34116213 acgaactctaatcgagttggttcggctcattgccaccccta 34116173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 41332243 - 41332362
Alignment:
Q  36 catttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataat 135  Q
    |||||| ||||| ||||||||||||||||||| | || |||  | |||| ||||||||||||||||   |||| | |||| |||| | |||||||||| |    
T  41332243 catttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatatt 41332342  T
Q  136 cgagttggttcggttcattg 155  Q
    |||||||||| |||||||||    
T  41332343 cgagttggtttggttcattg 41332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 9963759 - 9963837
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 102  Q
    ||||||||||||||||||  |||||||||||||||| | || |||| |||||| || |||||||||||| |||||||||    
T  9963759 tcaagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaacccagttcaacg 9963837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 13829877 - 13829974
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||| ||||||||||||||||  |||||||| | ||||||| || ||| || |||| ||||||||||||||||| || || |||||| ||||    
T  13829877 ttcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaacgaatcaattatcgaatcga 13829974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 27464713 - 27464572
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    ||||||| || ||| |||| |||  ||||||||||||||  |||||| |  ||| || |||||||||||||| ||||||  || || |||||| || | |    
T  27464713 ttcaagtccaactcctttatttagggaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagt 27464614  T
Q  123 gtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||||||  |||||||||||||||||||||||| |||||    
T  27464613 ctcgaactattttcgagttggttcggttcattgtcagcccta 27464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 27902551 - 27902439
Alignment:
Q  52 ttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttc 151  Q
    |||||||||||||||||| | | || ||  ||||||||||||||||| ||| || || | |||| |||| |  |||||| ||||||||||||||||||||    
T  27902551 ttaattttcagctcaagttcggttcattttgttcatgaaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttc 27902452  T
Q  152 attgtcatcccta 164  Q
    | ||||| |||||    
T  27902451 aatgtcagcccta 27902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 2578089 - 2578156
Alignment:
Q  34 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 101  Q
    |||||||| |||||||| |||||||||||||||||| |||||| || | |||||||| ||||||||||    
T  2578089 ctcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaac 2578156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 38409720 - 38409641
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaa 94  Q
    |||| ||||| |||||||||||| ||| || || ||||||||||||||||||||| | |||| || ||||||||||||||    
T  38409720 atatatagttaaagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 38409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 14103258 - 14103363
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||| |||||| |||||||||||||||||||||||||||||| | |||| |  ||  || || |||||||||||||| ||||  |||| ||| |    
T  14103258 atatatagtttaagttctgctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaaccaagttaaacgagttaattattg 14103357  T
Q  115 agtcga 120  Q
    ||||||    
T  14103358 agtcga 14103363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 35796258 - 35796358
Alignment:
Q  57 tttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgt 156  Q
    |||| |||||||| || | |||||| |||||||||||||||||| | || || | | ||||||||| || ||||||| |||||||| |||| ||||||||    
T  35796258 tttctgctcaagttcaacccgttagattcatgaaccaagttcaatgaatcaactgttgagtcgaatttcaaactatattcgagttgattcgattcattgt 35796357  T
Q  157 c 157  Q
    |    
T  35796358 c 35796358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 158
Target Start/End: Complemental strand, 17369125 - 17368996
Alignment:
Q  28 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 127  Q
    ||||| |||||||| ||||| || |||||||||| ||||||| |  ||| || ||||||| ||| || |||||||  |||| | |||||| || |  |||    
T  17369125 gttcaactcatttacttaacaaatttaattttcaactcaagttcgactcatt-ggttcataaactaaattcaacgagttaattgtcgagttgagttccga 17369027  T
Q  128 actataatcgagttggttcggttcattgtca 158  Q
    |||||| ||||||||| ||||||||||||||    
T  17369026 actatattcgagttggctcggttcattgtca 17368996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 19589918 - 19589841
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 98  Q
    |||||||||||||||||||||||||||| ||||| ||||| || ||||||  | ||| || |||||||||| |||||||    
T  19589918 tagttcaagttcagctcatttaattaacaaactt-atttttagttcaagtttatctcatttggttcatgaagcaagttc 19589841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 20203797 - 20203723
Alignment:
Q  81 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||||||||||||||||||||| || || | | || ||||||  |||||| ||||||||||||||||||| ||||    
T  20203797 ggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggttaattg 20203723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 33831418 - 33831453
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaa 50  Q
    |||||||| |||||||||||||||||||||||||||    
T  33831418 atatgtagctcaagttcagctcatttaattaacgaa 33831453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 40680221 - 40680263
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctca 66  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||    
T  40680221 tcaaattcagctcatttatttaacgaacataattttcagctca 40680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 39690170 - 39690215
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 69  Q
    ||||||||| |||| ||| || ||||||||||||||||||||||||    
T  39690170 tcaagttcaactcaattagttgacgaacttaattttcagctcaagt 39690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 1094457 - 1094533
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 100  Q
    ||||||||  |||||||| | ||||| ||||||||||| ||||||| |  ||| || |||||||||||||| |||||    
T  1094457 tcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaattcaa 1094533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 17616281 - 17616397
Alignment:
Q  38 tttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcg 137  Q
    |||| |||| |||||||||||| ||||||||| | |||| || |||||||| | ||| |||||||   ||| | |||| |||| | || ||||||  |||    
T  17616281 tttagttaatgaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcg 17616380  T
Q  138 agttggttcggttcatt 154  Q
    |||||||||| ||||||    
T  17616381 agttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 18667751 - 18667827
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 100  Q
    ||||||||| || ||||| |||||||| ||||  || ||||||| |   ||||||| ||||||||||||||||||||    
T  18667751 tcaagttcaacttatttatttaacgaaattaagctttagctcaaattatgctcgtttggttcatgaaccaagttcaa 18667827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 27906089 - 27906238
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27906089 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 27906188  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  27906189 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 27906238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 18880183 - 18880326
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18880183 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 18880282  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtca 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18880283 agtcgaatgtcgaactataatcgagttggttcggttcattgtca 18880326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 29328039 - 29328184
Alignment:
Q  19 gtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtc 118  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  29328039 gtagctcaagttaagctcatttaattaacgaacttaattttcagctcaagtccagct-gttaggttcatgaatcaagttcaacggattaaatatcgagtc 29328137  T
Q  119 gaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  29328138 gaatgtcgaactataatcgagtttgttcggttcattgtcagccctaa 29328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 31620859 - 31621008
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||| |||| || ||| ||||||||||||||||| ||||| ||| ||| | |||    
T  31620859 atatgtaactcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaaccaaattcaatggactaattgtcg 31620958  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||| |||||||||| || ||||||||||||||||||||| |||||    
T  31620959 agtcgaatttcgaactatattcaagttggttcggttcattgtcagcccta 31621008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 38523005 - 38522861
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||| |||  || |||||||||     
T  38523005 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatggaccaattatcgagtca 38522906  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||  ||||||||| ||||||||||||||||||||| || |||||    
T  38522905 aattacgaactatattcgagttggttcggttcattgccagcccta 38522861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 3801508 - 3801364
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| | |  || | ||||||||    
T  3801508 tagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcg 3801409  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||  ||||||||| ||||||||||||||||||||| || |||||    
T  3801408 aattacgaactatattcgagttggttcggttcattgccagcccta 3801364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 15933160 - 15933303
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaatt---ttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||| ||||||||| ||||||||||||||    || |||||| || || ||| ||||||||||||||||||||||||| ||||| | |||||||||    
T  15933160 tcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatgaaccaagttcaacgaattaactgtcgagtcga 15933259  T
Q  121 atgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    || |||||||||| ||||||||||||||||||||| || |||||    
T  15933260 atttcgaactatactcgagttggttcggttcattgccagcccta 15933303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 1840827 - 1840687
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||||||| || |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||  |||| | |||| | || |     
T  1840827 tcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattgagtt 1840728  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
      |||||||  ||||||||||||||||||||| || |||||    
T  1840727 ctgaactattgtcgagttggttcggttcattgccaacccta 1840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 19282257 - 19282120
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||| |||||| || ||||||||||||||||||||||  |||| | |||| |  |    
T  19282257 agttcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaatgaa 19282158  T
Q  121 atgtcgaactataatcgagttggttcggttcattgtca 158  Q
     |  |||||||| ||||||||||||| | |||||||||    
T  19282157 gttccgaactattatcgagttggttcagctcattgtca 19282120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 31021868 - 31021997
Alignment:
Q  29 ttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaa 128  Q
    ||||||||||||| ||||| ||||||||||  ||||||| | |||||| || ||||||||||||||  ||||||  |||| ||||||||||| |  ||||    
T  31021868 ttcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaaccaaactcaacgagttaattatcgagtcgagttccgaa 31021967  T
Q  129 ctataatcgagttggttcggttcattgtca 158  Q
    ||||| ||||||||||||||||||||||||    
T  31021968 ctatattcgagttggttcggttcattgtca 31021997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 20188973 - 20189113
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||| ||| || |||||||||||||| || |||||| | |||| || |||||||||||||||||| ||| || || |||||| || |||     
T  20188973 tcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaatt 20189072  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| ||||||||||| ||||||||||||||| |||||    
T  20189073 acgaactctaatcgagttgattcggttcattgtcagcccta 20189113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 27450725 - 27450581
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| ||| ||||||| || || |||||| |||    
T  27450725 tagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaaattcaacgaatcaattatcgaatcg 27450626  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||| ||| |||||  ||||||||||||||||||||| || |||||    
T  27450625 aatctcgcactattttcgagttggttcggttcattgccagcccta 27450581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 41783325 - 41783465
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | |||| || |||||||||||||||||||||| | ||| || |||||||| |     
T  41783325 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 41783424  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| || ||||||||  |||||||||||||| |||||    
T  41783425 ccgaactttattcgagttgtatcggttcattgtcagcccta 41783465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 154
Target Start/End: Original strand, 39407397 - 39407536
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| ||||||||||| || || |||||    
T  39407397 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcg 39407496  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcatt 154  Q
    | |||||| ||| |||||  | ||||||||||||||||||    
T  39407497 aatcgaatctcgcactatttttgagttggttcggttcatt 39407536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 14500846 - 14500716
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||| | |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| ||||||||||| |     
T  14500846 tcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattatcgagtcgagtt 14500747  T
Q  124 tcgaactataatcgagttggttcggttcatt 154  Q
     |||||| || ||||||||  ||||||||||    
T  14500746 ccgaactgtattcgagttgtatcggttcatt 14500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 34719806 - 34719655
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||| ||||||||| ||||||||||| || || |||||    
T  34719806 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaatcaagttcaacgaatcaattatcg 34719707  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    | || ||| ||| |||||  ||||||||||||| ||||||| || |||||||    
T  34719706 aatcaaatctcgcactattttcgagttggttcgtttcattgccagccctaat 34719655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 10493981 - 10494125
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||| |  ||| || ||||  |||||||||||||||| |  || ||| || |||    
T  10493981 tagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaattattgaatcg 10494080  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||| || ||||||  | ||||||||||||||||||| || |||||    
T  10494081 aatatcaaactatttttgagttggttcggttcattgccagcccta 10494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 26218047 - 26218187
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||| | |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  26218047 tcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 26218146  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| || | ||||||  ||||||||||| || |||||    
T  26218147 ccgaactttatttgagttgtatcggttcattgccagcccta 26218187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 27196077 - 27196217
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| ||| ||||  |||||| ||||||||||| ||||||| |  ||| || |||||||||||||| || |||| || || |||||| |||| |     
T  27196077 tcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtc 27196176  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  27196177 tcgaactattttcgagttggttcggttcattgtcagcccta 27196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 26298302 - 26298453
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||| ||||||| |||||||| ||||||| ||||||||| | |||||||    ||| ||||||||||||| ||||||||||| || || |||||    
T  26298302 atatttagtttaagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatcaagttcaacgaatcaattatcg 26298401  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
    | |||||| ||  |||||  | ||||||||||||||||||| || |||||||    
T  26298402 aatcgaatctcacactatttttgagttggttcggttcattgccagccctaat 26298453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 154
Target Start/End: Original strand, 26299838 - 26299977
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| |||||||||||||  ||||||| ||||||| ||||||||| | |||||||    ||| |||||||||||||  |||||||||| || || |||||    
T  26299838 atatttagttcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatgaagttcaacgaatcaattatcg 26299937  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcatt 154  Q
    | |||||| ||| |||||  ||||||||||||||||||||    
T  26299938 aatcgaatctcgcactattttcgagttggttcggttcatt 26299977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 39414181 - 39414312
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagc-tcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    |||||||||||||||||| ||||||||||||||||| | | | |||| |||||| ||||||||||| |||||||||||||  |||| | |||| |  | |    
T  39414181 tcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacgagttaattgtcgaattaagt 39414280  T
Q  123 gtcgaactataatcgagttggttcggttcatt 154  Q
     |||||||||  ||||||||||||||||||||    
T  39414281 ttcgaactattgtcgagttggttcggttcatt 39414312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 20190724 - 20190594
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||| |||   | ||||||||||||| ||||||||| | |||| || |||||||||||||||||| | | || || |||||| ||||||     
T  20190724 tcaagttcagctcaattaggcagcgaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcgatgaatcaattatcgaatcgaatt 20190625  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
     |||||| |||| |||||||||||||||||||    
T  20190624 acgaact-taatagagttggttcggttcattg 20190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 32157081 - 32156955
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||         ||| || ||||||| ||||||||| |||  || | || |||||    
T  32157081 tagttcaagttcagctcatttaattaacgaacttaattttcaactcaa---------gtttggctcatgaaacaagttcaatggaccaattgtcaagtcg 32156991  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||  ||||||||| |||| ||||||||||||||||    
T  32156990 aattacgaactatattcgaattggttcggttcattg 32156955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 32945158 - 32945020
Alignment:
Q  27 agttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcg 126  Q
    ||||| ||||||||| || |||| |||||||||   ||||||| |  ||| || ||||||||||||||||| |||| || || || ||| |||| | |||    
T  32945158 agttcggctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcg 32945059  T
Q  127 aactataatcgagttggttcggttcattgtcatccctaa 165  Q
    ||||||  |||||||||||||||||||||||| ||||||    
T  32945058 aactattttcgagttggttcggttcattgtcagccctaa 32945020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 11136146 - 11136051
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| ||||| |||||||||||||||| | ||| || ||||||||    
T  11136146 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaacgaactaattaccgagtcga 11136051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 34724891 - 34724763
Alignment:
Q  27 agttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcg 126  Q
    |||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| ||||||||||||| ||||||||||| || || |||| | |||||| ||     
T  34724891 agttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctca 34724792  T
Q  127 aactataatcgagttggttcggttcattg 155  Q
     |||||  || ||||||||||||||||||    
T  34724791 cactattttcaagttggttcggttcattg 34724763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 34857338 - 34857488
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||||| ||||| | |||||||| ||||||| ||||||||| | ||||||| |  ||| |||| |||||||| ||||||||||| || || ||| |    
T  34857338 atatttagtttaagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaatcaagttcaacgaatcaattattg 34857437  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    | | |||| ||  |||||  ||||||||||||||||||||| || ||||||    
T  34857438 aattgaatctcacactattttcgagttggttcggttcattgccaaccctaa 34857488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 19716174 - 19716318
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| |||||||||||||  ||||||| ||||||| ||||||||| | || |||| |  ||| ||||||||||||| ||||||||||| || || ||       
T  19716174 atatttagttcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaatcaagttcaacgaatcaatta--- 19716270  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
      |||||| ||| |||||  ||||||||||||||||||||| || |||||    
T  19716271 --tcgaatctcgcactattttcgagttggttcggttcattgccagcccta 19716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 34723802 - 34723715
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 102  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||| | |  ||| ||||||||||||| |||||||||||    
T  34723802 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaatcaagttcaacg 34723715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 40056497 - 40056382
Alignment:
Q  30 tcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaac 129  Q
    |||||||||||| ||||||||||||||||||| ||||| |  | ||  || |||||||||||||| |||||||   ||| | |||| |||||| || |||    
T  40056497 tcagctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaac 40056398  T
Q  130 tataatcgagttggtt 145  Q
    ||| ||||||||||||    
T  40056397 tattatcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 2676012 - 2676146
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||  | | ||| || |||||||||||||||||||||||| |  ||| || |||||||||||| ||||| ||| || || | |||  |||    
T  2676012 tagttcaagttcaatttaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaacctagttcgacgaatcaattgtcggatcg 2676111  T
Q  120 aatgtcgaactataatcgagttggttcggttcatt 154  Q
    |||  |||||| ||||||| |||||| ||||||||    
T  2676112 aattacgaactttaatcgaattggtttggttcatt 2676146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 43386763 - 43386858
Alignment:
Q  71 cagctcgttaggttcatgaaccaa--gttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||| |||||||||||||||||  |||||||||||||| | |||| |||||| || ||||||| || ||||| || | |||||||||| |||||    
T  43386763 cagctcattaggttcatgaaccaattgttcaacggattaattgtcgaatcgaatttcaaactatactcaagttgatttgattcattgtcagcccta 43386858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 165
Target Start/End: Complemental strand, 5382915 - 5382824
Alignment:
Q  74 ctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    |||||| |||||||||| ||||||||||| ||||| || ||| |||| | ||||||| |  || ||||||||| ||||||||||| ||||||    
T  5382915 ctcgtttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttcagttcattgtcagccctaa 5382824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 10327987 - 10328074
Alignment:
Q  81 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaatat 168  Q
    |||||||||| ||||||||||| || || || ||| |||| | | |||| ||  |||||||||||||||||||||||| |||||||||    
T  10327987 ggttcatgaatcaagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattgtcagccctaatat 10328074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 39409131 - 39409206
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaa 90  Q
    |||| ||||||||||||| |||||||| ||||||| ||||||||| | ||||||| |  ||| |||||||||||||    
T  39409131 atatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 28247473 - 28247551
Alignment:
Q  87 tgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    |||||||||||||||| || || |||| | || ||| |||||||||  |||| ||||||||||||||||||| ||||||    
T  28247473 tgaaccaagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcattgtcagccctaa 28247551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 17168589 - 17168449
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttc--agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagt 117  Q
    ||||||||||||| ||| ||||  ||||||| ||||||||   |||| |||| | |||| || ||||  |||||||||||||||  |||||||||||| |    
T  17168589 tagttcaagttcaactcgtttatataacgaagttaattttttgagcttaagttcggctcatttggtttgtgaaccaagttcaacaaattaaatatcgaat 17168490  T
Q  118 cgaatgtcgaactataatcgagttggttcggttcattgtca 158  Q
    | | | || ||||||  |||||||  |||||||||||||||    
T  17168489 ctagtctcaaactattttcgagttacttcggttcattgtca 17168449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 1225346 - 1225429
Alignment:
Q  19 gtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 102  Q
    ||||||||||||| | ||||||| || |||| ||||||||||| ||||||| |  ||| || ||||||| ||| ||||||||||    
T  1225346 gtagttcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaactaagttcaacg 1225429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 30661056 - 30660971
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaa 100  Q
    |||| ||||||| ||||  ||||| |||||||| ||||||||||||| || || | |||||| ||  |||||||||| ||||||||    
T  30661056 atatatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaactaagttcaa 30660971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 19287 - 19437
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  19287 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaaaggattagatatcg 19386  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatccctaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  19387 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaa 19437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 11161563 - 11161703
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11161563 atatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 11161662  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  11161663 agtcgaatgtcgaactataatcaagttggtttggttcattg 11161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 453474 - 453623
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  453474 atatgtagctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcg 453573  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  453574 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 33280121 - 33279977
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||| ||| || |||||||||||||| ||||||  | | |||| || |||||||||||||||||| ||| || || |||||| ||     
T  33280121 tagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatca 33280022  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||  |||||| ||||||||||||||||||||||||||| |||||    
T  33280021 aattacgaactttaatcgagttggttcggttcattgtcagcccta 33279977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 9412664 - 9412522
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||| |||||||||||||  ||||||| |||||| ||| ||||||| |||||| || ||||||||||||||||||||||  || | | |||||||||       
T  9412664 tcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaacgagttcattgtcgagtcgagct 9412565  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
     | ||||||||||||||||||||||||||||| || |||||||    
T  9412564 ccaaactataatcgagttggttcggttcattgccagccctaat 9412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 3307934 - 3308074
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||| | |||| || ||||||||||| |||||| |||  |||| | |||| |||| |     
T  3307934 tcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacgagttaattgtcgaatcgagtt 3308033  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     ||||||||  ||||||||||||||||||||| || |||||    
T  3308034 ccgaactattgtcgagttggttcggttcattgccagcccta 3308074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 34516134 - 34516269
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||| | |||| || |||| ||||| ||||||||| | || || | |||| | |    
T  34516134 tagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcatttggttgatgaatcaagttcaatgaatcaattgtcgaattg 34516233  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||  |||||| |||| |||||||||||||||||||    
T  34516234 aattacgaactttaattgagttggttcggttcattg 34516269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 27189222 - 27189092
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||| ||| || |||||||||||||||||||||||| |  ||| || |||||||||||||||||| ||| || || |||||| || |||     
T  27189222 tcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaatctaatt 27189123  T
Q  124 tcgaactataatcgagttggttcggttcatt 154  Q
     |||||| ||||||||||| |||||||||||    
T  27189122 acgaactctaatcgagttgattcggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 166
Target Start/End: Original strand, 43384831 - 43384936
Alignment:
Q  61 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatc 160  Q
    ||||||||| || ||| || |||||||||||||| ||||||| ||||| |||||| |||||| |||||||||  |||||||||||||||||||||  |||    
T  43384831 agctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgctatc 43384930  T
Q  161 cctaat 166  Q
    ||||||    
T  43384931 cctaat 43384936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 43967510 - 43967588
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 102  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||| |||||||    
T  43967510 tcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaacg 43967588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 23181151 - 23181225
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaa 94  Q
    |||||||||||||||||| ||| || ||||||||||||||||| |||||| | |||| || ||||||||||||||    
T  23181151 tagttcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaa 23181225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 34655035 - 34655175
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||| | |||||||| ||||| |||||||| || ||||||||| |  |||||| ||||||||||| |||||||||  | ||| || |||||||| |     
T  34655035 tcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattaccgagtcgagtt 34655134  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
     |||||| || ||||||||  ||||||||||| || |||||    
T  34655135 ccgaactttattcgagttgtatcggttcattgccagcccta 34655175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 1091727 - 1091857
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||  || |||||||||||||| | |||| || |  |||||| |||||||||| ||||||||||| ||||| |||||| |||| |     
T  1091727 tcaagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattatcgaatcgagtc 1091826  T
Q  124 tcgaactataatcgagttggttcggttcatt 154  Q
    || ||||||  | ||||| |||| |||||||    
T  1091827 tcaaactatttttgagtttgttcagttcatt 1091857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 9135943 - 9136048
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| ||| |||||| ||| ||||||| ||||| ||||||| ||||||||||||| |||||  || | ||||| ||||||||||||||  |||| | |||    
T  9135943 atatatagatcaagtccagttcatttagttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacgagttaattgtcg 9136042  T
Q  115 agtcga 120  Q
    ||||||    
T  9136043 agtcga 9136048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 12378389 - 12378492
Alignment:
Q  61 agctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatc 160  Q
    ||||||||| || ||| || ||||| |||||||||||||||| || || ||||||  ||||| ||| |||||  | ||||| |||||||||||||||| |    
T  12378389 agctcaagttcaactcatttggttcgtgaaccaagttcaacgaatcaattatcgaaccgaatctcggactatttttgagtttgttcggttcattgtcaac 12378488  T
Q  161 ccta 164  Q
    ||||    
T  12378489 ccta 12378492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 10749359 - 10749314
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagt 69  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||    
T  10749359 tcaagttcagctcaattagttgacgaacttaattttcagctcaagt 10749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 24854603 - 24854739
Alignment:
Q  28 gttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcga 127  Q
    |||| |||| ||||||||||||  |||||||||||||||||| || ||| || ||||||  ||||||||| ||||  |||| | |||||| |||| || |    
T  24854603 gttcggctcgtttaattaacgagtttaattttcagctcaagttcaactcatttggttcacaaaccaagtttaacgagttaattgtcgagttgaatttcaa 24854702  T
Q  128 actataatcgagttggttcggttcattgtcatcccta 164  Q
    ||| || || || || ||||||| |||| || |||||    
T  24854703 actttattcaagctgtttcggtttattgccaacccta 24854739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 164
Target Start/End: Original strand, 39478090 - 39478190
Alignment:
Q  64 tcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcatccct 163  Q
    |||||| || ||| || |||||||||||||||| ||| | |  || |||||| |||| | |||||||||  ||||||||||||||||||||| || ||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagccct 39478189  T
Q  164 a 164  Q
    |    
T  39478190 a 39478190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 32740639 - 32740769
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||| ||| |  ||| ||||||| ||||||| |||||| ||| || || |||||||||||||| ||||| |  |||| | |||| | || |     
T  32740639 tcaagttcagcttattaatctaatgaacttatttttcagttcaagttcagttcatttggttcatgaaccaaattcaatgagttaattgtcgaattgagtt 32740738  T
Q  124 tcgaactataatcgagttggttcggttcatt 154  Q
     | ||||||  ||||||||||||||||||||    
T  32740739 ccaaactattgtcgagttggttcggttcatt 32740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 23181246 - 23181278
Alignment:
Q  133 aatcgagttggttcggttcattgtcatccctaa 165  Q
    |||||||||||||||||||||||||| ||||||    
T  23181246 aatcgagttggttcggttcattgtcaaccctaa 23181278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 35058318 - 35058398
Alignment:
Q  35 tcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcga 115  Q
    ||||||| ||||| ||||| ||||||||||||||| |||||| || | ||  |||||||| || |||| ||||| ||||||    
T  35058318 tcatttagttaacaaacttgattttcagctcaagttcagctcatttgattgttgaaccaaattaaacgaattaattatcga 35058398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 4e-60; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 10346712 - 10346861
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  10346712 atatgtaactcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatag 10346811  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||||||||||||||||| |||||| ||||||||| || |||||    
T  10346812 agtcgaatgtcgaactataatcgatttggtttggttcattgccagcccta 10346861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 8200633 - 8200771
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||           |||||||||||||||| |||||||||||||||||||||||    
T  8200633 atatgtagctcaagttcaactcatttaattaacgaacttaattttcagc-----------tcgttaggttcatgaatcaagttcaacggattaaatatcg 8200721  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  8200722 agtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 8200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 5640401 - 5640252
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| |||||||||||||||||| ||| || ||||||||||||||||| |||||| | |||| || |||||||||||||||||| ||| || || |||||    
T  5640401 atatatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcg 5640302  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | ||||||  |||||| |||||||||||||||||||||||| || |||||    
T  5640301 aatcgaattacgaactctaatcgagttggttcggttcattgccagcccta 5640252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 4441444 - 4441310
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||  |||| ||||||||||||||||   ||| | |||| ||||    
T  4441444 agttcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaattgtcgaatcga 4441345  T
Q  121 atgtcgaactataatcgagttggttcggttcattg 155  Q
     | |||||||||  |||||||||||||||||||||    
T  4441344 gtttcgaactattgtcgagttggttcggttcattg 4441310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 3081862 - 3081718
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||| |  ||| || ||||| |||||||||||||||| |  || |||||| |||    
T  3081862 tagttcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcgaatcg 3081763  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    | | |||||||||  ||||| ||||||||||||||| || |||||    
T  3081762 agtatcgaactattttcgagctggttcggttcattgccagcccta 3081718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 10961940 - 10961796
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||| ||| || |||||||||||||||||||||| | |  ||| || |||||||||||||||||||||| || || | |||| ||     
T  10961940 tagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatca 10961841  T
Q  120 aatgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||  | |||| |||||||||||||||||||||||| || |||||    
T  10961840 aattacaaactttaatcgagttggttcggttcattgccagcccta 10961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 6999264 - 6999409
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    ||||||||||||| ||||||  ||||| ||||||||||||||||||||| |||||| ||  |||||| |||||||||||||| ||||| |||||| ||||    
T  6999264 agttcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaattatcgaatcga 6999363  T
Q  121 atgtcgaactataatcgagttggttcggttcattgtcatccctaat 166  Q
     | || ||||||  |||||||| |||| || ||||||  |||||||    
T  6999364 gtctcaaactattgtcgagttgcttcgatttattgtctgccctaat 6999409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 33 - 165
Target Start/End: Original strand, 1501857 - 1501989
Alignment:
Q  33 gctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactat 132  Q
    ||||||||| ||||||||||||||||||||||||||| | | || || ||||||||||| ||||||||||  |||| | || | |||| | |||||| ||    
T  1501857 gctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaat 1501956  T
Q  133 aatcgagttggttcggttcattgtcatccctaa 165  Q
      |||||||||||||||||||||||| ||||||    
T  1501957 tgtcgagttggttcggttcattgtcagccctaa 1501989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 13312019 - 13312164
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||| |  ||| || |||||||||||||||| ||| | |  || |||||| ||||    
T  13312019 agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcga 13312118  T
Q  121 --atgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
      || |||||||||  ||||||||||||||||||||| || |||||    
T  13312119 gtatatcgaactattttcgagttggttcggttcattgccagcccta 13312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 33110458 - 33110589
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||  |||||||| |||||||||||||| || |||| |||| | ||||||| |||||||||||||||||||||| | ||| || |||||||| |     
T  33110458 tcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagtt 33110557  T
Q  124 tcgaactataatcgagttggttcggttcattg 155  Q
     |||||| || ||||||||  |||||||||||    
T  33110558 ccgaactttattcgagttgtatcggttcattg 33110589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 7437300 - 7437434
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||||||||||||||||| ||||||| ||||||||||| || |||| |  ||| || ||||| |||||||||||||||| |   | |||||| |||    
T  7437300 tagttcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaacccattatcgaatcg 7437399  T
Q  120 aatgtcgaactataatcgagttggttcggttcatt 154  Q
    | | |||||||||  ||||||| ||||||||||||    
T  7437400 agtatcgaactattttcgagttagttcggttcatt 7437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 32163541 - 32163618
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 101  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||  ||||| |||||||||||||||| |||||||    
T  32163541 tcaagttaagctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaaccatgttcaac 32163618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 11460146 - 11460011
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||        | || |||||||||||||||||||||| || || |||||| |||| |     
T  11460146 tcaagttcagctcatttatttaacaaacttaattctcagctcaa--------catttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtt 11460055  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatccctaata 167  Q
     |||||||| || ||||||| ||||||||||| || ||||||||    
T  11460054 ccgaactattattgagttggatcggttcattgccaaccctaata 11460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 17441168 - 17441298
Alignment:
Q  34 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactata 133  Q
    |||||||| || |||| ||||||||||| ||||||| || ||| || ||||||||||| |||||||||| ||||| || | | |||| | |||||||||     
T  17441168 ctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactatt 17441267  T
Q  134 atcgagttggttcggttcattgtcatcccta 164  Q
     ||| ||||||||||||||||| || |||||    
T  17441268 ttcgggttggttcggttcattgccaacccta 17441298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 9950900 - 9950826
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 98  Q
    |||||||||||||| ||| || |||||||||||||||| ||||||| | |||| || ||||||||||||||||||    
T  9950900 tcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaagttc 9950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 13355761 - 13355722
Alignment:
Q  28 gttcagctcatttaattaacgaacttaattttcagctcaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13355761 gttcagctcatttaattaacgaacttaattttcagctcaa 13355722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 18095519 - 18095653
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||| ||||||||||||||||| | ||||||| |  ||  || ||||| |||||||||||||||| ||  | |||||| |||| |     
T  18095519 tcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtc 18095618  T
Q  124 tcgaactataatcgagttggttcggttcattgtca 158  Q
    || |||| |  | ||||||||| ||||||||||||    
T  18095619 tcaaactttttttgagttggtttggttcattgtca 18095653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 18099816 - 18099950
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||| ||||||||||||||| | | ||||| | |  ||| || ||||| |||||||||||||||| ||  | |||||| |||| |     
T  18099816 tcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtc 18099915  T
Q  124 tcgaactataatcgagttggttcggttcattgtca 158  Q
    || |||| |  ||||||||||| ||||||||||||    
T  18099916 tcaaacttttttcgagttggtttggttcattgtca 18099950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 27985034 - 27984956
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttc 98  Q
    |||||||||||||||||| ||| || || |||||||||||||| |||||| | |||| || ||||||| ||||||||||    
T  27985034 tagttcaagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcatttggttcataaaccaagttc 27984956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 22295928 - 22295989
Alignment:
Q  36 catttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagtt 97  Q
    |||||| |||||||||||||| || ||||||||| | ||||||| |||||||||||||||||    
T  22295928 catttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtt 22295989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 12428887 - 12428929
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctca 66  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  12428887 tcaagttcggctcatttatttaacgaacttaattttcagctca 12428929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 21298913 - 21298955
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctca 66  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  21298913 tcaagttcagctcagttaattaacaaacttaattttcagctca 21298955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 9463498 - 9463363
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    ||||| |||||| |||| ||||| |||||||||||||||| || | || | |||||| || ||||||| ||| ||||| || |  |||| ||||||||||    
T  9463498 tagtttaagttcggctcgtttaaataacgaacttaatttttagtttaaattcagctcatttggttcataaactaagtttaatgagttaattatcgagtcg 9463399  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    | |  |||||| || |||||| |  |||||||||||    
T  9463398 agttccgaactttattcgagtagtctcggttcattg 9463363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 124625 - 124490
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||||||| ||||||||||||||||||| ||||||||  ||||||||||| |  ||| || |||||||||||||||||||| |||  || | |||||||     
T  124625 tagttcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagttcaatggaccaattgtcgagtca 124526  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    ||| |||||||||| |||||||||||||||||||||    
T  124525 aatttcgaactatattcgagttggttcggttcattg 124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 7450 - 7308
Alignment:
Q  22 gttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaa 121  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||||| | |||| || |||||||||||||||||| ||| || || |||||| |||||    
T  7450 gttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaa 7351  T
Q  122 tgtcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |  |||||  ||||||| |||||||||||||||| || |||||    
T  7350 ttacgaacactaatcgaattggttcggttcattgccaccccta 7308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 11460 - 11600
Alignment:
Q  15 atatgtagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcg 114  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||| || |||  ||||| ||||||||||| ||||| |||||    
T  11460 atatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcg 11559  T
Q  115 agtcgaatgtcgaactataatcgagttggttcggttcattg 155  Q
    |||| ||| |  ||||||  |||||||||||||||||||||    
T  11560 agtcaaattttaaactatgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 9985 - 10120
Alignment:
Q  20 tagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcg 119  Q
    |||| ||| ||||||||||||||||||||||||||||||||| || |||| | |||| || ||| |||||| ||| ||||||| ||||| | |||||||     
T  9985 tagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtca 10084  T
Q  120 aatgtcgaactataatcgagttggttcggttcattg 155  Q
    ||| |  ||||||| |||||||| ||||||||||||    
T  10085 aattttaaactatattcgagttgattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 21088 - 21227
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatg 123  Q
    ||||||||| |||||||| |||| || ||||||||||| ||||||| |  ||| || |||||||||||||||||||||| || || |||||| |||| |     
T  21088 tcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactcttt-ggttcatgaaccaagttcaacgaatcaattatcgaatcgagtc 21186  T
Q  124 tcgaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  21187 tcgaactattttcgagttggttcggttcattgtcagcccta 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 164
Target Start/End: Complemental strand, 26759 - 26621
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    |||||||||||| ||| || |||||||||||||||||||||||| |  ||| || | |||||||||||||||||||  || |  | |||| ||||||  |    
T  26759 aagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattac 26660  T
Q  126 gaactataatcgagttggttcggttcattgtcatcccta 164  Q
    ||||| |||| ||||||||||| |||||||||| |||||    
T  26659 gaactctaattgagttggttcgattcattgtcagcccta 26621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 14428 - 14566
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    |||||| ||||||||| || |||| ||||||||||  ||||||| ||  || || |||||||||||||||||||| | || || || ||| |||| | ||    
T  14428 aagttcggctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttc 14527  T
Q  126 gaactataatcgagttggttcggttcattgtcatcccta 164  Q
    |||||||  ||| |||||||||||||||||||| |||||    
T  14528 gaactattttcgggttggttcggttcattgtcagcccta 14566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 11392 - 11524
Alignment:
Q  26 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 125  Q
    |||||| ||||||||| ||||||||||||||||| | || |||| || ||| || ||||||||||| |||||| |||   ||| | |||| |||| |  |    
T  11392 aagttcggctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttcc 11491  T
Q  126 gaactataatcgagttggttcggttcattgtca 158  Q
     |||||| |||||||||||||||||||||||||    
T  11492 aaactattatcgagttggttcggttcattgtca 11524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 324 - 241
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 107  Q
    ||||||||| |||||||||||||||||||||||| | | ||||||| | |||  ||||||||||||||||||| ||||| ||||    
T  324 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaatta 241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 907 - 829
Alignment:
Q  24 tcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 102  Q
    ||||||||| |||||||| ||||||| ||||||||||| | ||| | || ||| || ||||||||||||||||||||||    
T  907 tcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacg 829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 32926 - 32794
Alignment:
Q  21 agttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcga 120  Q
    ||||||||||||  ||||||| ||||||| |||||||| || ||||||| |  ||| || |||   |||||||||||||||| |  || | |||| ||||    
T  32926 agttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcga 32829  T
Q  121 atgtcgaactataatcgagttggttcggttcattg 155  Q
     | |||||||||  |||||||||||||||||||||    
T  32828 gtatcgaactattttcgagttggttcggttcattg 32794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 25706 - 25623
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 107  Q
    |||||||||| ||||||||||||||| ||||||||||||| | |||| | |||| || |  |||| |||||||||||||| ||||    
T  25706 ttcaagttcatctcatttaattaacggacttaattttcagtttaagttc-gctcatttgactcataaaccaagttcaacgaatta 25623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 155
Target Start/End: Complemental strand, 51443 - 51311
Alignment:
Q  23 ttcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaat 122  Q
    |||||||||| |||||||| ||||| | ||||||||| |  ||| || |  ||| || |||||| |||| |||||||||| ||||  || |||  |||||    
T  51443 ttcaagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacgaactaagttcaacgaattatttaccgaaccgaat 51344  T
Q  123 gtcgaactataatcgagttggttcggttcattg 155  Q
     |||||||||  ||||| | |||||||||||||    
T  51343 ctcgaactattttcgagctagttcggttcattg 51311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University