View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1365_low_3 (Length: 727)
Name: NF1365_low_3
Description: NF1365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1365_low_3 |
 |  |
|
| [»] scaffold0475 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 602; Significance: 0; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 602; E-Value: 0
Query Start/End: Original strand, 30 - 714
Target Start/End: Complemental strand, 37296090 - 37295389
Alignment:
| Q |
30 |
gattttgattgaaagctgttttcacttttcagcgtatgattattaatttta-----------------tgtgtttttgttgttgctactaggaagagaaa |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
37296090 |
gattttgattgaaagctgttttcacttttcagcgtatgattattaattttaattttaaggttattttatgtgtttttgttgttgctactaggaagagaaa |
37295991 |
T |
 |
| Q |
113 |
cgagaattgtatgtaatcggcaattgggatttgtgatgtatagattattgagatctttaagccaaatttaaattgtttgcctttaaccaagagaagattt |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
37295990 |
cgagaattgtatgtaatcggcaattgggatttgtgatgtatagattattgagatctttaacccgaatttaaattgtttgcctttaactaagagaagattt |
37295891 |
T |
 |
| Q |
213 |
ttataagatttgtaccactaagccaggcccttttggaataaacagcttaatttgcagcttatgctagcttacagcataaagttaaattgttttcgtttaa |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37295890 |
ttataagatttgtaccactaagccaggcccttttggaataaacagcttaatctgcagcttatgctagcttacagcataaagttaaattgttttcgtttaa |
37295791 |
T |
 |
| Q |
313 |
gctataagttgttttcataacctgtcttagaaaacgtatgaacatgttttaagctgtttttgtcacacaacttgtgtcagtagataataagccaatccaa |
412 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37295790 |
gctataagttgttttcataacctatcttagaaaacgtatgaacatgttttaagctgtttttgtcacacaacttgtgtcagtagataataagccaatccaa |
37295691 |
T |
 |
| Q |
413 |
acaggcttaattctttgcctcttaactccctatgtttgtttatttgtaagtatttgtggttattgatgtgagattgtgcatatgtagatatgttcatggg |
512 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37295690 |
acaggcttaattctttgcctcttaactccatatgtttgtttatttgtaagtatttgtggttattgatgtgagattgtgcatatgtagatatgttcatggg |
37295591 |
T |
 |
| Q |
513 |
ttttgatgagatcgacgcggatgaagatataagggaagagtttctctgtccattttgttctgagtattttgatatcgttggattgtgctgccacattgat |
612 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37295590 |
ttttgatgagaacgacgcggatgaagatataagggaagagtttctctgtccattttgttctgagtattttgatatcgttggattgtgctgccacattgat |
37295491 |
T |
 |
| Q |
613 |
gaagagcatccaatggaagcaaaaaatggggtacgtatgactacttttgtttgccttatgttgtttttccaaccagcttacaaggttttcagtattgggt |
712 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
37295490 |
gaagagcatccaatggaggcaaaaaatggggtatgtatgactacttttgtttgccttatgttgttttcccaaccaacttacaaggttttcagtattgggt |
37295391 |
T |
 |
| Q |
713 |
ct |
714 |
Q |
| |
|
|| |
|
|
| T |
37295390 |
ct |
37295389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 354
Target Start/End: Original strand, 49888740 - 49888806
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaa |
354 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||||||||||| || ||||||| ||| |||||| |
|
|
| T |
49888740 |
ataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaa |
49888806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 288 - 335
Target Start/End: Complemental strand, 7218171 - 7218124
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacct |
335 |
Q |
| |
|
||||||| ||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
7218171 |
ataaagtcaaattgttttcatataagctataagttgttttcataacct |
7218124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 11218038 - 11218001
Alignment:
| Q |
292 |
agttaaattgttttcgtttaagctataagttgttttca |
329 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
11218038 |
agttaaattgttttcgtataagctataagttgttttca |
11218001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 473137 - 473181
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
473137 |
ataaagttaaattgttttcgtgtatgctataagttgtttttataa |
473181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 24915148 - 24915096
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtctt |
340 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||||||| ||||||| |
|
|
| T |
24915148 |
ataaagttaaattgtttttgtatatgctataagctgttttcataagctgtctt |
24915096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 25006131 - 25006087
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
25006131 |
ataaagtcaaattgttttcatataagctataagttgttttcataa |
25006087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 34952188 - 34952232
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
34952188 |
ataaagttaaattgttttcgaataagctgtaagttgttttcataa |
34952232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 36070223 - 36070267
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
36070223 |
ataaagttaaattgtcttcggataagctataagttgttttcataa |
36070267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 49517043 - 49517087
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
49517043 |
ataaagtcaaattgttttcatttaagctataagctgttttcataa |
49517087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 51538939 - 51538895
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
51538939 |
ataaagttaaattgttttcgtttaagttggaagttgttttcataa |
51538895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 38018461 - 38018418
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcata |
331 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||| |||||||||| |
|
|
| T |
38018461 |
ataaagttaaattgttttcgtataagctagaagctgttttcata |
38018418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 49557114 - 49557157
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcata |
331 |
Q |
| |
|
|||||||||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
49557114 |
ataaagttaaatagtattcatttaagctataagttgttttcata |
49557157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 27976570 - 27976612
Alignment:
| Q |
290 |
aaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
|||||||||||||||| || || |||||||||||||||||||| |
|
|
| T |
27976570 |
aaagttaaattgtttttgtatatgctataagttgttttcataa |
27976612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 29128395 - 29128353
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcat |
330 |
Q |
| |
|
|||||||||| || |||||||||||||||||| |||||||||| |
|
|
| T |
29128395 |
ataaagttaatttattttcgtttaagctataaattgttttcat |
29128353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 5422009 - 5421932
Alignment:
| Q |
296 |
aaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaacatgttttaagctgttttt |
373 |
Q |
| |
|
||||||||||| | |||||||||||||||||| |||| || ||||||| | | || ||||||| |||| |||||||| |
|
|
| T |
5422009 |
aaattgttttcttataagctataagttgttttgataagctatcttagagagcttacaaacatgtcttaaactgttttt |
5421932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 7244746 - 7244689
Alignment:
| Q |
297 |
aattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaa |
354 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||| | |||| || |||||||||| |
|
|
| T |
7244746 |
aattgttttcgtataagctatacgttgttttcataagcgatcttggagaacgtatgaa |
7244689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 29793754 - 29793799
Alignment:
| Q |
287 |
cataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||| ||||||| |
|
|
| T |
29793754 |
cataaagttaagttgttttcgtataagctataagttgagttcataa |
29793799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 37841971 - 37842008
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgtt |
325 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
37841971 |
ataaagttaaattgttttcgtataagctatatgttgtt |
37842008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 38578499 - 38578544
Alignment:
| Q |
287 |
cataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
|||||||||||||| |||| || ||||||||||||||||| ||||| |
|
|
| T |
38578499 |
cataaagttaaattatttttgtataagctataagttgtttacataa |
38578544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 565 - 651
Target Start/End: Original strand, 46179613 - 46179699
Alignment:
| Q |
565 |
ttttgttctgagtattttgatatcgttggattgtgctgccacattgatgaagagcatccaatggaagcaaaaaatggggtacgtatg |
651 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| | ||||| |||||||||||| ||||| |
|
|
| T |
46179613 |
ttttgttctgaatattttgatattgttggattgtgctgccacattgatcaagaccatccacttgaagccaaaaatggggtatgtatg |
46179699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 18350797 - 18350720
Alignment:
| Q |
295 |
taaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaacatgttttaagctgtttt |
372 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||||||||| || || | || | | ||||||||||||||||||| |||| |
|
|
| T |
18350797 |
taaattgttttcgtataagttataagctgttttcataagctatcatggagagcttatgaacatgttttaagctatttt |
18350720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 354
Target Start/End: Complemental strand, 20881730 - 20881667
Alignment:
| Q |
291 |
aagttaaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaa |
354 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||||||| || ||||| | ||| |||||| |
|
|
| T |
20881730 |
aagttaaattgtttccgtacaagctataagttgttttcataaactatcttaaagaacttatgaa |
20881667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 30180024 - 30180063
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgtttt |
327 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
30180024 |
ataaagttaaattgttttcgtataagctataagctgtttt |
30180063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 30496677 - 30496727
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtc |
338 |
Q |
| |
|
||||||| ||||||||||||| ||| ||||| ||||||||||||| ||||| |
|
|
| T |
30496677 |
ataaagtcaaattgttttcgtataacctataggttgttttcataaactgtc |
30496727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Complemental strand, 9093653 - 9093598
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtcttaga |
343 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |
|
|
| T |
9093653 |
ataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttaga |
9093598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 415279 - 415321
Alignment:
| Q |
290 |
aaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
415279 |
aaagttaaattgttttcgtataagctataagttgtttttataa |
415321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 6909969 - 6909924
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataac |
333 |
Q |
| |
|
|||||||||||||||||| || || ||||||||||||||||||||| |
|
|
| T |
6909969 |
ataaagttaaattgtttttgtatatgctataagttgttttcataac |
6909924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 7485165 - 7485121
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
7485165 |
ataaagttaaatttttttcatataagctataagttgttttcataa |
7485121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 42907332 - 42907373
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttca |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42907332 |
ataaagttaaattgttttcgtttaagctataagttgttttca |
42907373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 1625873 - 1625917
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
1625873 |
ataaagttaaattgttttcgtataagttataagttgttttcataa |
1625917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 9750919 - 9750961
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcat |
330 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
9750919 |
ataaagttaaattgttttcttataagctataagttgttttcat |
9750961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 11513871 - 11513915
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
11513871 |
ataaagtcaaattgttttcatataagctataagttgttttcataa |
11513915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 18066101 - 18066145
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
18066101 |
ataaagttaaattgttttcatataagctataagctgttttcataa |
18066145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 35755599 - 35755555
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
35755599 |
ataaagtcaaattgttttcatgtaagctataagttgttttcataa |
35755555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 43199387 - 43199431
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
43199387 |
ataaagttaaattatcttcgtataagctataagttgttttcataa |
43199431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 26626848 - 26626890
Alignment:
| Q |
290 |
aaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||||||| ||||||| ||| ||||||||||| |
|
|
| T |
26626848 |
aaagttaaattgttttcgtataagctagaagctgttttcataa |
26626890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 354
Target Start/End: Original strand, 42457921 - 42457987
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaa |
354 |
Q |
| |
|
|||||||||||||||||| ||||||||| | || ||| ||||||| || ||||||| ||| |||||| |
|
|
| T |
42457921 |
ataaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatgaa |
42457987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 43199890 - 43199852
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttt |
326 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
43199890 |
ataaagttaaattgtttttgtataagctataagttgttt |
43199852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 40279173 - 40279214
Alignment:
| Q |
291 |
aagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||| || |||| |||||||||||||||||| |
|
|
| T |
40279173 |
aagttaaattgttttggtataagatataagttgttttcataa |
40279214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 41851508 - 41851549
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttca |
329 |
Q |
| |
|
|||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
41851508 |
ataaagttaaattgtttttgtatatgctataagttgttttca |
41851549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 25885832 - 25885876
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
25885832 |
ataaagttaaattgttttcgtgtaagctataagttgttttcataa |
25885876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 354
Target Start/End: Complemental strand, 27043927 - 27043861
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaa |
354 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||| |||| || |||| || |||||||||| |
|
|
| T |
27043927 |
ataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatgaa |
27043861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 6927590 - 6927546
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||||||| | ||| ||||||||||||||||||| |
|
|
| T |
6927590 |
ataaagttaaattgttttcatgtaaactataagttgttttcataa |
6927546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 343
Target Start/End: Complemental strand, 35571725 - 35571673
Alignment:
| Q |
291 |
aagttaaattgttttcgtttaagctataagttgttttcataacctgtcttaga |
343 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| ||||||||||| || ||||||| |
|
|
| T |
35571725 |
aagttatattgttttcgtataagctataagctgttttcataagctatcttaga |
35571673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 47946174 - 47946214
Alignment:
| Q |
291 |
aagttaaattgttttcgtttaagctataagttgttttcata |
331 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
47946174 |
aagttaaattgttttcgtataagctataaattgttttcata |
47946214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 47119060 - 47119019
Alignment:
| Q |
290 |
aaagttaaattgttttcgtttaagctataagttgttttcata |
331 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||| |||||| |
|
|
| T |
47119060 |
aaagttaaattgttttcatataagctataagttgtattcata |
47119019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 49219112 - 49219165
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtctta |
341 |
Q |
| |
|
||||||| ||||| ||||| | ||||||||||||||||||||||| || ||||| |
|
|
| T |
49219112 |
ataaagtcaaattattttcatataagctataagttgttttcataaactatctta |
49219165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 34770865 - 34770909
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
34770865 |
ataaagtcaaattgttttcatttaagctataagttgttttcataa |
34770909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 24558829 - 24558870
Alignment:
| Q |
291 |
aagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
24558829 |
aagttaaattattttcgtataagctataagttgttttcataa |
24558870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 778362 - 778406
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| ||||||||||| |
|
|
| T |
778362 |
ataaagttaaattgttttcattttagctataagctgttttcataa |
778406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 7918870 - 7918826
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
7918870 |
ataaagttaaatttttttcttgtaagctataagttgttttcataa |
7918826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 335
Target Start/End: Complemental strand, 16210983 - 16210936
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacct |
335 |
Q |
| |
|
||||||||| ||||||||| | |||||||||||||||||||| ||||| |
|
|
| T |
16210983 |
ataaagttacattgttttcatataagctataagttgttttcaaaacct |
16210936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 773302 - 773344
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcat |
330 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
773302 |
ataaagttaaattgttttcattttagctataagctgttttcat |
773344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 787796 - 787838
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcat |
330 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
787796 |
ataaagttaaattgttttcattttagctataagctgttttcat |
787838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 2093252 - 2093294
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcat |
330 |
Q |
| |
|
||||||| |||| |||||| ||||||||||||||||||||||| |
|
|
| T |
2093252 |
ataaagtcaaatggttttcttttaagctataagttgttttcat |
2093294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 353
Target Start/End: Complemental strand, 2595094 - 2595029
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatga |
353 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||| ||| ||||| |
|
|
| T |
2595094 |
ataaagttaaattgttttcgtactagccataagttgttttcataagctgcattagacaacttatga |
2595029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000003; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 354
Target Start/End: Original strand, 12425544 - 12425610
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaa |
354 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||| || || |||| || ||| |||||| |
|
|
| T |
12425544 |
ataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaa |
12425610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 10272525 - 10272484
Alignment:
| Q |
291 |
aagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10272525 |
aagtcaaattgttttcgtataagctataagttgttttcataa |
10272484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 42646891 - 42646932
Alignment:
| Q |
291 |
aagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
42646891 |
aagttaaattgtttttgtttaagctataaggtgttttcataa |
42646932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 6587204 - 6587160
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6587204 |
ataaacttcaattgttttcgtataagctataagttgttttcataa |
6587160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 2568632 - 2568675
Alignment:
| Q |
290 |
aaagttaaattgtttt-cgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
2568632 |
aaagttaaattgtttttcgtataagctataagttgttttcataa |
2568675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 39105440 - 39105503
Alignment:
| Q |
291 |
aagttaaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaa |
354 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||||| || |||| || ||| |||||| |
|
|
| T |
39105440 |
aagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaa |
39105503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 37914732 - 37914770
Alignment:
| Q |
294 |
ttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
37914732 |
ttaaattgttttcgtataagctataaattgttttcataa |
37914770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 40452264 - 40452306
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcat |
330 |
Q |
| |
|
||||||||||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
40452264 |
ataaagttaaattattttggtttaagctataagctgttttcat |
40452306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 12554494 - 12554539
Alignment:
| Q |
290 |
aaagttaaattgttttcgtttaagctataagttgttttcataacct |
335 |
Q |
| |
|
|||||||||||||||| || || ||||||||||||||| ||||||| |
|
|
| T |
12554494 |
aaagttaaattgtttttgtatatgctataagttgtttttataacct |
12554539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 42569730 - 42569775
Alignment:
| Q |
287 |
cataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||| ||| ||||||| |
|
|
| T |
42569730 |
cataaagtgaaattgttttcgtctaagctataagctgtcttcataa |
42569775 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 35; Significance: 0.0000000003; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 354
Target Start/End: Original strand, 21367640 - 21367706
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataacctgtcttagaaaacgtatgaa |
354 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||||||| || |||| || ||| |||||| |
|
|
| T |
21367640 |
ataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaa |
21367706 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 14145885 - 14145929
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcataa |
332 |
Q |
| |
|
||||||||||||||||||||| || |||||||||| ||||||||| |
|
|
| T |
14145885 |
ataaagttaaattgttttcgtatatgctataagttattttcataa |
14145929 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 35450563 - 35450605
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcat |
330 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||||||||||||| |
|
|
| T |
35450563 |
ataaagtaaaattgttttcttataagctataagttgttttcat |
35450605 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 48397619 - 48397661
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttcat |
330 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
48397619 |
ataaagtcaaattgtttttatttaagctataagttgttttcat |
48397661 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 30956723 - 30956682
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttca |
329 |
Q |
| |
|
|||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
30956723 |
ataaagttaaattgtttttgtataggctataagttgttttca |
30956682 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 30972535 - 30972494
Alignment:
| Q |
288 |
ataaagttaaattgttttcgtttaagctataagttgttttca |
329 |
Q |
| |
|
|||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
30972535 |
ataaagttaaattgtttttgtataggctataagttgttttca |
30972494 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 326
Target Start/End: Complemental strand, 11851 - 11814
Alignment:
| Q |
289 |
taaagttaaattgttttcgtttaagctataagttgttt |
326 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11851 |
taaagttaaattgttttcgtataagctataagttgttt |
11814 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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