View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13660_high_10 (Length: 302)
Name: NF13660_high_10
Description: NF13660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13660_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 5037960 - 5037676
Alignment:
| Q |
1 |
tttttaaatgaattgtaagcaagtggtagccgacattcgcaaatagaatatatttgaatatggttatgttcttaattaatgttaaaaaattataatcgtc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
5037960 |
tttttaaatgaattgtaagcaagtggtagccgacattcgcaaatagaatatgtttgaatatggttatgttcttaattaatgtaaaaaaattataatcgtc |
5037861 |
T |
|
| Q |
101 |
catttgaaacaatttttatgttgtgttcattaggtgattaggaaatggtagagctcttgccctagcaaaggcaacaagtacatctaatacgctcttcaaa |
200 |
Q |
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|||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
5037860 |
catttgaaacaatttttatgttttgttcactaggcgattaggaaatggtagagctcttgctctagcaaaggcaacaagtacatctaatacgctcttcaaa |
5037761 |
T |
|
| Q |
201 |
cttaataactttagtaccaagctgtatttgaaatattttcattaattttgtttatgtcagatataaagagttacatggggaatgt |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
5037760 |
cttaataactttagtaccaagctgtatttgaaatattttcattaattttgtttgtgtcagatataaagagttacatggggaatgt |
5037676 |
T |
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