View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13660_low_13 (Length: 329)
Name: NF13660_low_13
Description: NF13660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13660_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 311
Target Start/End: Original strand, 17386176 - 17386485
Alignment:
| Q |
1 |
acatgttactcacttaaaatcagcacaacaaagggaaagagtacaaacacctaattcaatatttgtaataccatgactataatacacaacaaaactagca |
100 |
Q |
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| T |
17386176 |
acatgttactaacttaaaatcagcacaacaaagggaaagagtacaaacacctaattcaatatttgtaataccatgactataatacacaacaaaactagca |
17386275 |
T |
|
| Q |
101 |
aaatcaaaaagtccaaaattttcaattccagtttggttcacataatactaaaacagcaacaaatatctaccaaattctagattaaacacaacaaaatgaa |
200 |
Q |
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| T |
17386276 |
aaatcaaaaagtccaaaattttcaattccagtttggttcacataatactaaaacagcaacaaatatctaccaaattctagattaaacacaacaaaatgaa |
17386375 |
T |
|
| Q |
201 |
taagaatcactgactctcatgtcacagtgttacattagaaacattagaccattaagtcaaccaatgaatcacaaaccaa-acgcggacacgtcacacacc |
299 |
Q |
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||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |||||||| ||||||||| |
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| T |
17386376 |
taagaatcactga--ctcatgtcacagtgttacattagagacattagaccattaagtcaacctatgaatcacaaaccaagatgcggacacctcacacacc |
17386473 |
T |
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| Q |
300 |
acatacattagc |
311 |
Q |
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||||||| |||| |
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| T |
17386474 |
acatacactagc |
17386485 |
T |
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