View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13666_high_8 (Length: 315)
Name: NF13666_high_8
Description: NF13666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13666_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 43888010 - 43888205
Alignment:
| Q |
15 |
agagtgacactctgtcaaaaaccatcgtgttcgtgtcgttgcatgcttcataacgtgaagctatttattgtgcctcaaactgcgacacta-tcaattttt |
113 |
Q |
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| T |
43888010 |
agagtgacactctgtcaaaaaccatcgtgttcgtgtcgttgcatgcttcataacgtgaagctatttattgtgcctcaaactgcgacactattcaattttt |
43888109 |
T |
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| Q |
114 |
gaaatgttaacattactctctcttttcctcggttgtttaatttttgaaatgttaacaaaaatgttcatg-ggatgggatacttgttaatgaattataa |
210 |
Q |
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| T |
43888110 |
gaaatgttaacattaatctctcttttcctccgttgtttaatttttaaaatgttaac--taatgttcatgttcatgggacacttattaatgaattataa |
43888205 |
T |
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