View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13667_high_7 (Length: 382)
Name: NF13667_high_7
Description: NF13667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13667_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 12 - 364
Target Start/End: Complemental strand, 49591864 - 49591512
Alignment:
| Q |
12 |
atgaacatgaggtggattatctagcaagtaaaggaaaccaagacgtgaagagattgttcaacaaattggattctacagtcctcaataggattccaagggg |
111 |
Q |
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| T |
49591864 |
atgaacatgaggtggattatctagcaagtaaaggaaaccaagacgtgaagagattgttcaacaaattggattctacagttctcaataggattccaagggg |
49591765 |
T |
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| Q |
112 |
acctgtgaaagaaaagaagtacagatgattttagatcttctttgtcacgcatgaaatataaaatatatgatgtactctctttaatttcatattcagttta |
211 |
Q |
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| T |
49591764 |
acctgtgaaagaaaagaagtacagatgattttagatcttctttgtcacgcatgaaatataaaatttatgatgtactctctttaatttcatattcagttta |
49591665 |
T |
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| Q |
212 |
ctaccttaagcatgtaaatgaataatgttgtacttaatttaataattaaatacaacgcatacgttatcataaatttttacttatagcggaaactaattca |
311 |
Q |
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| T |
49591664 |
ctaccttaagcatgtaaatcaataatgttgtactttatttaataattaaatacaacgcatacgttatcataaatttttacttatagcggaaactaattaa |
49591565 |
T |
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| Q |
312 |
agttatcatagaagtatgcatttcaaatcaaacgttgatgacaactttagaat |
364 |
Q |
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| T |
49591564 |
agttatcatagaagtatgcatttcaaatcaaacgttgatgacaactttagaat |
49591512 |
T |
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