View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13667_low_17 (Length: 235)
Name: NF13667_low_17
Description: NF13667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13667_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 52584048 - 52584273
Alignment:
| Q |
1 |
attctatcaatcacatttccaccaacatcaacaagatcttcaagaagtgactgtactggtttaaggtatctagagttcccaataacggaaccaaaactct |
100 |
Q |
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| T |
52584048 |
attctatcaatcacatttccaccaacatcaacaagatcttcaagaagtgactgtactggtttaaggtatctagagttcccaataacagaaccaaaactct |
52584147 |
T |
|
| Q |
101 |
cacttccataagaagtagaagtagaacggttcaataataatgagttattattattagaacctgaagcaaaagttccacttccaccactgaaaaaataatc |
200 |
Q |
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| T |
52584148 |
cacttccataagaagtagaagtagaacggttcaataataatgagttattattattagaacctgaagcaaaagttccacttccaccactgaaaaaataatc |
52584247 |
T |
|
| Q |
201 |
acttgttagattctccaccacaggtt |
226 |
Q |
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||| |||||||||||||||||||||| |
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| T |
52584248 |
actagttagattctccaccacaggtt |
52584273 |
T |
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