View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13667_low_19 (Length: 226)
Name: NF13667_low_19
Description: NF13667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13667_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 30808620 - 30808436
Alignment:
| Q |
29 |
atggtgggtaagagaatctgaaaatataaagataaattgagaattagctttcattcctataaccgatagatgcacaagcatgtctccatgaaatccttat |
128 |
Q |
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| T |
30808620 |
atggtgggtaagagaatctgaaaatataaaggtaaattgagaattagctttcattcctataaccgatagatgcacaagcatgtctccatgaaatccttat |
30808521 |
T |
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| Q |
129 |
gtcatcacaattaaaactgtcaaagacggaaactaacatatgaaccaatctgataaatgtttgacaaagacgtggaacattttga |
213 |
Q |
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|||| |||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30808520 |
gtcaacacaattaaaactgtcaaagacagaaattaacagatgaaccaatctgataaatgtttgacaaagacgtggaacattttga |
30808436 |
T |
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