View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13669_low_5 (Length: 364)

Name: NF13669_low_5
Description: NF13669
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13669_low_5
NF13669_low_5
[»] chr7 (34 HSPs)
chr7 (8-217)||(21669979-21670197)
chr7 (8-201)||(43933573-43933775)
chr7 (8-217)||(16376558-16376776)
chr7 (8-216)||(24924077-24924294)
chr7 (8-217)||(13786168-13786386)
chr7 (8-217)||(40968889-40969107)
chr7 (8-156)||(21656626-21656773)
chr7 (8-217)||(21804585-21804803)
chr7 (8-217)||(27138541-27138759)
chr7 (8-217)||(38163352-38163570)
chr7 (8-217)||(42242167-42242385)
chr7 (8-207)||(15109688-15109896)
chr7 (8-217)||(21341821-21342039)
chr7 (8-217)||(31373454-31373672)
chr7 (8-217)||(33916960-33917178)
chr7 (13-217)||(3840654-3840867)
chr7 (8-217)||(27903430-27903648)
chr7 (8-217)||(17178250-17178469)
chr7 (8-198)||(21753524-21753723)
chr7 (46-206)||(39030276-39030446)
chr7 (8-57)||(31096698-31096746)
chr7 (171-217)||(31097882-31097928)
chr7 (328-364)||(7894207-7894244)
chr7 (13-58)||(17178507-17178551)
chr7 (13-57)||(3840912-3840955)
chr7 (13-57)||(16376812-16376855)
chr7 (13-57)||(21341737-21341780)
chr7 (13-57)||(21656547-21656590)
chr7 (13-57)||(21669895-21669938)
chr7 (13-57)||(21804842-21804885)
chr7 (13-57)||(27138798-27138841)
chr7 (13-57)||(31373370-31373413)
chr7 (13-57)||(33917217-33917260)
chr7 (13-57)||(42242424-42242467)
[»] chr6 (29 HSPs)
chr6 (8-217)||(17202430-17202648)
chr6 (14-217)||(13533771-13533983)
chr6 (13-217)||(15044725-15044938)
chr6 (8-217)||(3592891-3593109)
chr6 (8-201)||(10584757-10584959)
chr6 (8-217)||(12597278-12597496)
chr6 (8-217)||(19997663-19997881)
chr6 (8-217)||(33645940-33646158)
chr6 (8-209)||(2005426-2005636)
chr6 (8-217)||(28099610-28099828)
chr6 (8-137)||(8539598-8539726)
chr6 (8-154)||(17594814-17594960)
chr6 (8-217)||(2266766-2266992)
chr6 (8-138)||(25448747-25448876)
chr6 (158-217)||(1405576-1405635)
chr6 (171-217)||(8539723-8539769)
chr6 (171-217)||(8657077-8657123)
chr6 (13-57)||(2266684-2266727)
chr6 (83-115)||(5134444-5134476)
chr6 (13-57)||(10584996-10585039)
chr6 (13-57)||(12597535-12597578)
chr6 (13-57)||(15044639-15044682)
chr6 (13-57)||(17202348-17202391)
chr6 (13-57)||(17594733-17594776)
chr6 (13-57)||(19997580-19997623)
chr6 (80-120)||(22730709-22730749)
chr6 (13-57)||(28099868-28099911)
chr6 (158-194)||(33035590-33035626)
chr6 (13-57)||(33645858-33645901)
[»] chr3 (44 HSPs)
chr3 (8-217)||(26948796-26949014)
chr3 (8-217)||(36076467-36076685)
chr3 (8-217)||(4584447-4584665)
chr3 (8-217)||(20671247-20671465)
chr3 (8-216)||(31488409-31488626)
chr3 (8-210)||(39146438-39146649)
chr3 (8-204)||(45557910-45558115)
chr3 (8-217)||(12264198-12264416)
chr3 (8-217)||(38653940-38654158)
chr3 (8-217)||(43363624-43363842)
chr3 (8-217)||(49672560-49672778)
chr3 (8-217)||(1941733-1941951)
chr3 (8-217)||(3898420-3898638)
chr3 (8-217)||(21098302-21098520)
chr3 (8-217)||(34121353-34121571)
chr3 (8-217)||(49506362-49506580)
chr3 (8-154)||(24119205-24119350)
chr3 (8-154)||(49478206-49478351)
chr3 (8-217)||(54073025-54073246)
chr3 (8-217)||(55041596-55041820)
chr3 (59-217)||(40014666-40014834)
chr3 (8-82)||(26052236-26052309)
chr3 (74-198)||(26051334-26051469)
chr3 (158-217)||(6460181-6460240)
chr3 (171-217)||(37099714-37099760)
chr3 (13-58)||(21098219-21098263)
chr3 (176-205)||(23210365-23210394)
chr3 (13-57)||(1941990-1942033)
chr3 (13-57)||(3898338-3898381)
chr3 (13-57)||(12264115-12264158)
chr3 (13-57)||(20671166-20671209)
chr3 (13-57)||(26052349-26052392)
chr3 (13-57)||(26948689-26948732)
chr3 (13-57)||(31488329-31488372)
chr3 (13-57)||(34121271-34121314)
chr3 (13-57)||(38654198-38654241)
chr3 (13-57)||(43363881-43363924)
chr3 (83-115)||(43566806-43566838)
chr3 (13-57)||(45558153-45558196)
chr3 (13-57)||(49478124-49478167)
chr3 (13-57)||(49672478-49672521)
chr3 (79-115)||(50724420-50724456)
chr3 (79-115)||(50788392-50788428)
chr3 (13-57)||(55041858-55041901)
[»] chr4 (41 HSPs)
chr4 (14-217)||(16904965-16905177)
chr4 (8-217)||(46256032-46256250)
chr4 (8-217)||(33139484-33139702)
chr4 (8-217)||(37590817-37591035)
chr4 (8-217)||(44376092-44376310)
chr4 (8-217)||(12090472-12090691)
chr4 (8-217)||(52434622-52434840)
chr4 (8-211)||(16917907-16918119)
chr4 (14-217)||(35760585-35760797)
chr4 (8-217)||(30824935-30825153)
chr4 (8-156)||(45977074-45977221)
chr4 (8-217)||(53143275-53143493)
chr4 (8-216)||(41387124-41387341)
chr4 (8-217)||(37651664-37651882)
chr4 (8-156)||(45782513-45782660)
chr4 (8-156)||(48118615-48118762)
chr4 (8-211)||(39058376-39058588)
chr4 (8-156)||(31966053-31966200)
chr4 (8-207)||(31628510-31628718)
chr4 (8-156)||(52098274-52098422)
chr4 (8-217)||(47142813-47143031)
chr4 (13-156)||(50229790-50229933)
chr4 (8-156)||(54624955-54625095)
chr4 (83-130)||(34684606-34684653)
chr4 (78-115)||(6481589-6481626)
chr4 (13-57)||(12090730-12090773)
chr4 (13-57)||(16905218-16905261)
chr4 (13-57)||(16918158-16918201)
chr4 (79-115)||(23935032-23935068)
chr4 (13-57)||(30825192-30825235)
chr4 (13-57)||(31966239-31966282)
chr4 (79-115)||(37997852-37997888)
chr4 (13-57)||(39058622-39058665)
chr4 (13-57)||(45977264-45977307)
chr4 (13-57)||(47143070-47143113)
chr4 (13-57)||(48118802-48118845)
chr4 (158-190)||(50229712-50229744)
chr4 (13-57)||(52098460-52098503)
chr4 (13-57)||(52434540-52434583)
chr4 (13-57)||(53143534-53143577)
chr4 (13-57)||(54624879-54624922)
[»] chr8 (50 HSPs)
chr8 (8-217)||(11725188-11725406)
chr8 (8-217)||(18841902-18842120)
chr8 (14-217)||(28582859-28583071)
chr8 (8-206)||(39257441-39257648)
chr8 (8-207)||(40026798-40027006)
chr8 (8-217)||(15961130-15961348)
chr8 (8-217)||(18997698-18997916)
chr8 (8-217)||(30473897-30474115)
chr8 (8-199)||(28274245-28274445)
chr8 (8-210)||(24408874-24409085)
chr8 (8-210)||(44832206-44832417)
chr8 (8-217)||(6299033-6299251)
chr8 (8-217)||(10477935-10478153)
chr8 (8-217)||(18175379-18175597)
chr8 (8-217)||(18568863-18569081)
chr8 (8-156)||(19240661-19240808)
chr8 (8-156)||(19313845-19313992)
chr8 (8-156)||(19412829-19412977)
chr8 (8-217)||(32110874-32111092)
chr8 (18-207)||(35122345-35122543)
chr8 (8-217)||(995828-996046)
chr8 (8-156)||(24004811-24004958)
chr8 (8-217)||(44836907-44837125)
chr8 (8-217)||(11142459-11142683)
chr8 (45-217)||(39997725-39997907)
chr8 (13-198)||(18210656-18210850)
chr8 (8-129)||(23353688-23353808)
chr8 (8-98)||(25875441-25875530)
chr8 (8-71)||(18481929-18481991)
chr8 (172-217)||(23353635-23353680)
chr8 (8-57)||(39997660-39997708)
chr8 (81-130)||(33155319-33155368)
chr8 (13-57)||(6299290-6299333)
chr8 (13-57)||(10477853-10477896)
chr8 (13-57)||(11142381-11142424)
chr8 (13-57)||(11725106-11725149)
chr8 (83-115)||(13702362-13702394)
chr8 (13-57)||(18175297-18175340)
chr8 (13-57)||(18997616-18997659)
chr8 (13-57)||(19240580-19240623)
chr8 (13-57)||(19313764-19313807)
chr8 (13-57)||(19412752-19412795)
chr8 (13-57)||(23353846-23353889)
chr8 (13-57)||(24408795-24408838)
chr8 (13-57)||(30474153-30474196)
chr8 (13-57)||(32111131-32111174)
chr8 (13-57)||(35122585-35122628)
chr8 (13-57)||(39997580-39997623)
chr8 (13-57)||(44832457-44832500)
chr8 (13-57)||(44836824-44836867)
[»] chr2 (29 HSPs)
chr2 (8-217)||(19596376-19596594)
chr2 (8-217)||(8700259-8700477)
chr2 (8-217)||(31424007-31424225)
chr2 (8-217)||(26231272-26231490)
chr2 (8-217)||(41664508-41664726)
chr2 (8-200)||(36279484-36279685)
chr2 (8-217)||(6120550-6120768)
chr2 (8-217)||(18351549-18351767)
chr2 (8-217)||(41663235-41663453)
chr2 (13-156)||(34007793-34007935)
chr2 (8-208)||(42055197-42055404)
chr2 (8-156)||(999315-999462)
chr2 (8-217)||(44902080-44902297)
chr2 (13-217)||(20544828-20545041)
chr2 (8-210)||(42441958-42442173)
chr2 (8-156)||(16214822-16214969)
chr2 (74-201)||(692231-692368)
chr2 (87-217)||(27944809-27944949)
chr2 (13-57)||(19596634-19596677)
chr2 (171-217)||(31572451-31572497)
chr2 (83-115)||(3179377-3179409)
chr2 (13-57)||(6120467-6120510)
chr2 (13-57)||(16214741-16214784)
chr2 (13-57)||(18351467-18351510)
chr2 (13-57)||(26231527-26231570)
chr2 (13-57)||(31423924-31423967)
chr2 (13-57)||(34007980-34008023)
chr2 (13-57)||(41663152-41663195)
chr2 (13-57)||(42441876-42441919)
[»] chr5 (41 HSPs)
chr5 (8-217)||(1395987-1396205)
chr5 (8-217)||(20655062-20655280)
chr5 (8-207)||(5479194-5479402)
chr5 (8-217)||(20874686-20874904)
chr5 (8-156)||(27647928-27648075)
chr5 (8-217)||(34107351-34107569)
chr5 (8-217)||(34110650-34110868)
chr5 (8-217)||(38246878-38247096)
chr5 (8-217)||(33375760-33375980)
chr5 (8-217)||(10729455-10729673)
chr5 (8-217)||(16526319-16526537)
chr5 (8-156)||(29275622-29275769)
chr5 (8-211)||(24223183-24223395)
chr5 (8-217)||(2398955-2399171)
chr5 (8-156)||(1394570-1394717)
chr5 (8-156)||(6940587-6940734)
chr5 (8-217)||(25099249-25099467)
chr5 (8-217)||(25158339-25158557)
chr5 (8-217)||(17373174-17373395)
chr5 (8-156)||(33570391-33570538)
chr5 (8-156)||(14141191-14141338)
chr5 (13-156)||(17913744-17913886)
chr5 (90-217)||(40177120-40177257)
chr5 (78-115)||(18101954-18101991)
chr5 (13-57)||(1395907-1395950)
chr5 (13-57)||(2399210-2399253)
chr5 (83-115)||(4316976-4317008)
chr5 (13-57)||(5479115-5479158)
chr5 (13-57)||(6940768-6940811)
chr5 (13-57)||(10729712-10729755)
chr5 (13-57)||(14141377-14141420)
chr5 (13-57)||(16526577-16526620)
chr5 (13-57)||(17373434-17373477)
chr5 (13-57)||(20874604-20874647)
chr5 (13-57)||(24223434-24223477)
chr5 (13-57)||(27647845-27647888)
chr5 (13-57)||(33570578-33570621)
chr5 (13-57)||(34107608-34107651)
chr5 (13-57)||(34110566-34110609)
chr5 (13-57)||(38247135-38247178)
chr5 (13-57)||(40177033-40177076)
[»] chr1 (38 HSPs)
chr1 (8-210)||(38444629-38444840)
chr1 (8-217)||(4266379-4266597)
chr1 (8-217)||(23482720-23482938)
chr1 (8-217)||(34888699-34888917)
chr1 (8-217)||(38913760-38913978)
chr1 (8-217)||(9216029-9216247)
chr1 (8-217)||(35614065-35614283)
chr1 (13-217)||(52687127-52687339)
chr1 (8-217)||(18855246-18855463)
chr1 (8-206)||(50151058-50151265)
chr1 (8-217)||(2951379-2951597)
chr1 (8-156)||(7333942-7334089)
chr1 (8-156)||(39727978-39728125)
chr1 (8-217)||(18706522-18706739)
chr1 (27-217)||(1231813-1232012)
chr1 (8-149)||(19768462-19768602)
chr1 (13-156)||(35614819-35614960)
chr1 (18-156)||(19764634-19764771)
chr1 (8-138)||(2590333-2590461)
chr1 (86-217)||(31018213-31018354)
chr1 (86-217)||(50326076-50326217)
chr1 (158-217)||(29942175-29942234)
chr1 (79-115)||(50575954-50575990)
chr1 (158-197)||(5061380-5061419)
chr1 (171-217)||(29387900-29387946)
chr1 (180-217)||(52957055-52957092)
chr1 (13-57)||(1231725-1231768)
chr1 (13-57)||(2951636-2951679)
chr1 (13-57)||(4266297-4266340)
chr1 (171-211)||(14009851-14009891)
chr1 (13-57)||(18706773-18706816)
chr1 (13-57)||(19764814-19764857)
chr1 (13-57)||(19768382-19768425)
chr1 (13-57)||(23482972-23483015)
chr1 (79-115)||(24168585-24168621)
chr1 (13-57)||(35614734-35614777)
chr1 (13-57)||(38914017-38914060)
chr1 (13-57)||(52036310-52036353)
[»] scaffold0173 (1 HSPs)
scaffold0173 (8-217)||(19345-19563)
[»] scaffold0031 (1 HSPs)
scaffold0031 (8-217)||(46272-46490)
[»] scaffold0022 (2 HSPs)
scaffold0022 (8-217)||(149063-149281)
scaffold0022 (13-57)||(149318-149361)
[»] scaffold0515 (1 HSPs)
scaffold0515 (69-217)||(6074-6232)
[»] scaffold0306 (1 HSPs)
scaffold0306 (69-217)||(6084-6242)
[»] scaffold0836 (1 HSPs)
scaffold0836 (88-217)||(5291-5430)
[»] scaffold0896 (1 HSPs)
scaffold0896 (171-217)||(1087-1133)


Alignment Details
Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 21669979 - 21670197
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21669979 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 21670077  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||||||| |||||           |||||||||| | |||||||||||||||||||||||||||    
T  21670078 ggttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 21670177  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||||||||||||| |||||    
T  21670178 gacctgtgcggcagcacggg 21670197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 43933775 - 43933573
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43933775 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 43933677  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||||||| |||||           |||||||||||| |||||||||||||||||||||||||||    
T  43933676 ggttcgaattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatat 43933577  T
Q  198 gacc 201  Q
    ||||    
T  43933576 gacc 43933573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 16376776 - 16376558
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16376776 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 16376678  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||| ||| |||||           |||||||||| | |||||||||||||||||||||||||||    
T  16376677 ggttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 16376578  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  16376577 gacccgtgcggcagcacggg 16376558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 8 - 216
Target Start/End: Original strand, 24924077 - 24924294
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24924077 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctga 24924175  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||| |||| |||||||| ||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  24924176 ggttcaaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 24924275  T
Q  198 gacctgtgcggcagaacgg 216  Q
    |||| ||||||||| ||||    
T  24924276 gacccgtgcggcagcacgg 24924294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 13786168 - 13786386
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13786168 ccaataatataacattgacatataattttaacaaaa-aaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 13786266  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||| ||| |||||           |||||||||| | |||||||||||||||||||||||||||    
T  13786267 ggttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 13786366  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  13786367 gacccgtgcggcagcacggg 13786386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 40968889 - 40969107
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40968889 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 40968987  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||| ||| |||||           |||||||||| | | |||||||||||||||||||||||||    
T  40968988 ggttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatat 40969087  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  40969088 gacccgtgcggcagcacggg 40969107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 21656626 - 21656773
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21656626 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 21656724  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| |||||||| |||||    
T  21656725 ggttcgaattccaacatctgcatatatttgggaccacatattttattct 21656773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 21804803 - 21804585
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  21804803 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 21804705  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  21804704 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 21804605  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  21804604 gacccgtgcggcagcacggg 21804585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 27138759 - 27138541
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  27138759 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 27138661  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| ||||| |||||||||    
T  27138660 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatat 27138561  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||||||||||||| |||||    
T  27138560 gacctgtgcggcagcacggg 27138541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 38163570 - 38163352
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  38163570 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 38163472  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  38163471 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 38163372  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  38163371 gacccgtgcggcagcacggg 38163352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 42242385 - 42242167
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  42242385 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 42242287  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  42242286 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 42242187  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  42242186 gacccgtgcggcagcacggg 42242167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 15109896 - 15109688
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  15109896 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctga 15109798  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  15109797 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 15109698  T
Q  198 gacctgtgcg 207  Q
    | || |||||    
T  15109697 gtccggtgcg 15109688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 21341821 - 21342039
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  21341821 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 21341919  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||| ||||||||||||||||||           |||||||||| | |||||||| || |||||||||||||||    
T  21341920 ggttcgaattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatat 21342019  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  21342020 gacccgtgcggcagcacggg 21342039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 31373454 - 31373672
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  31373454 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 31373552  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||| || |||||||||||||||    
T  31373553 ggttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatat 31373652  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  31373653 gacccgtgcggcagcacggg 31373672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 33917178 - 33916960
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  33917178 ccaataatataatattgacatataattttaacaaaagaa-tgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 33917080  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  33917079 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 33916980  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  33916979 gacccgtgcggcagcacggg 33916960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 217
Target Start/End: Complemental strand, 3840867 - 3840654
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 112  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  3840867 aatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttc 3840769  T
Q  113 gaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacct 202  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| ||||||||||||||||||      
T  3840768 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgactc 3840669  T
Q  203 gtgcggcagaacggg 217  Q
    ||||||||| |||||    
T  3840668 gtgcggcagcacggg 3840654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 27903648 - 27903430
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||||||||||||| |||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  27903648 ccaataatataacattgacatagaattttaacaaaagaa-tgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatga 27903550  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||| ||| |||||           |||||||||| | ||||||||||||||||||||| |||||    
T  27903549 ggttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatat 27903450  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  27903449 gacccgtgcggcagcacggg 27903430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 17178469 - 17178250
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaa-ggtgaataagtgtggtgtctg 106  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||   |||||||||||||||||||||    
T  17178469 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctg 17178371  T
Q  107 aggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtata 196  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| ||||||||||||||    
T  17178370 aggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtata 17178271  T
Q  197 tgacctgtgcggcagaacggg 217  Q
    |||||  |||||||| |||||    
T  17178270 tgacccatgcggcagcacggg 17178250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 8 - 198
Target Start/End: Complemental strand, 21753723 - 21753524
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21753723 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaa 21753625  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||||||||| ||||||||||| |||||| ||| |||| ||| |||||           |||||||||| | |||||||||||||||||||||||||||    
T  21753624 ggttcgaattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 21753525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 46 - 206
Target Start/End: Complemental strand, 39030446 - 39030276
Alignment:
Q  46 aatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactaca 145  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  146 tatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacctgtgc 206  Q
    | ||| |||||           ||||| |||| | ||||||||||||||||||||| ||||||||| ||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaatatatatgacccgtgc 39030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 31096698 - 31096746
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  31096698 ccaataatataatattgacatataattttaacaaaag-aatgaagtaaca 31096746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 31097882 - 31097928
Alignment:
Q  171 tttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||||||  |||||||||||||||| ||||||||| |||||    
T  31097882 tttgtctactacacttacaatgtatatgacccgtgcggcagcacggg 31097928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 7894207 - 7894244
Alignment:
Q  328 gaaaacaaaccctactcttactcccg-tctcctccaaa 364  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7894207 gaaaacaaaccctactcttactcccgttctcctccaaa 7894244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 17178551 - 17178507
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaa 58  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaag-aatgaagtaacaa 17178507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 3840955 - 3840912
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaag-aatgaagtaaca 3840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 16376855 - 16376812
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||    
T  16376855 aatataacattgacatataatttttacaaaa-taatgaagtaaca 16376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 21341737 - 21341780
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaag-aatgaagtaaca 21341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 21656547 - 21656590
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaag-aatgaagtaaca 21656590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 21669895 - 21669938
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaag-aatgaagtaaca 21669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 21804885 - 21804842
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaag-aatgaagtaaca 21804842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 27138841 - 27138798
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaag-aatgaagtaaca 27138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 31373370 - 31373413
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaag-aatgaagtaaca 31373413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33917260 - 33917217
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaag-aatgaagtaaca 33917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 42242467 - 42242424
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaag-aatgaagtaaca 42242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 4e-69; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 17202430 - 17202648
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17202430 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 17202528  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||| ||||| | |||||||||||||||||||||||||||    
T  17202529 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatat 17202628  T
Q  198 gacctgtgcggcagaacggg 217  Q
    ||| |||||||||| |||||    
T  17202629 gacttgtgcggcagcacggg 17202648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 13533771 - 13533983
Alignment:
Q  14 atataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13533771 atataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 13533869  T
Q  114 aatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacctg 203  Q
    |||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||| ||||||||||||||||||||||||||| |    
T  13533870 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccg 13533969  T
Q  204 tgcggcagaacggg 217  Q
    |||||||| |||||    
T  13533970 tgcggcagcacggg 13533983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 15044725 - 15044938
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 112  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15044725 aatataacattgacatataattttaacaaaagaa-tgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 15044823  T
Q  113 gaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacct 202  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||           ||||| |||| | ||||||||||||||||||||||||||||||||    
T  15044824 gaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatgacct 15044923  T
Q  203 gtgcggcagaacggg 217  Q
    ||||||||| |||||    
T  15044924 gtgcggcagcacggg 15044938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 3592891 - 3593109
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3592891 ccaataatataacattgagatataattttaacaaaagaa-tgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctga 3592989  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| ||||||||| || |||||||||  ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  3592990 ggttcgaattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatat 3593089  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  3593090 gacccgtgcggcagcacggg 3593109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 10584959 - 10584757
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10584959 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctga 10584861  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           ||| |||||| | |||||||||||||||||||||||||||    
T  10584860 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatat 10584761  T
Q  198 gacc 201  Q
    ||||    
T  10584760 gacc 10584757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 12597496 - 12597278
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  12597496 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 12597398  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  12597397 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 12597298  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  12597297 gacccgtgcggcagcacggg 12597278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 19997663 - 19997881
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  19997663 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 19997761  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  19997762 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 19997861  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  19997862 gacccgtgcggcagcacggg 19997881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 33645940 - 33646158
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  33645940 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 33646038  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| ||||||| || ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  33646039 ggttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 33646138  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  33646139 gacccgtgcggcagcacggg 33646158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 209
Target Start/End: Original strand, 2005426 - 2005636
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2005426 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 2005524  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||  ||| |||| ||| |||||           |||||||||| | |||||||||| ||||||||||||||||    
T  2005525 ggttcgaattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatat 2005624  T
Q  198 gacctgtgcggc 209  Q
    |||| |||||||    
T  2005625 gacccgtgcggc 2005636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 28099828 - 28099610
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  28099828 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 28099730  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| ||||||| |||| |||||||||| ||||||||||||||           |||||||||| | |||||||| || |||||||||||||||    
T  28099729 ggttcgaattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatat 28099630  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  28099629 gacccgtgcggcagcacggg 28099610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 8539598 - 8539726
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8539598 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 8539696  T
Q  108 ggttcgaatttcaacatctgcatgtatttg 137  Q
    |||||||||| |||||||||||| ||||||    
T  8539697 ggttcgaattccaacatctgcatatatttg 8539726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 17594814 - 17594960
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaatt-aatatttttaaggtgaataagtgtggtgtctg 106  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17594814 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctg 17594912  T
Q  107 aggttcgaatttcaacatctgcatgtatttgggactacatatttcatt 154  Q
    | ||| |||||||||||||| ||| |||||||||| ||||||||||||    
T  17594913 aagtttgaatttcaacatctccatatatttgggaccacatatttcatt 17594960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 2266766 - 2266992
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataag--------tgtg 99  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||         |||    
T  2266766 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtg 2266864  T
Q  100 gtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctaca 189  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||    
T  2266865 gtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctaca 2266964  T
Q  190 atgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||||| ||||||||| |||||    
T  2266965 atgtatatgacccgtgcggcagcacggg 2266992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 25448747 - 25448876
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||  |||||||||| |||||||||||    
T  25448747 ccaataatataatattgacatataattttaacaaaa-aaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctga 25448845  T
Q  108 ggttcgaatttcaacatctgcatgtatttgg 138  Q
    | |||||||| |||||||| ||| |||||||    
T  25448846 gtttcgaattccaacatctacatatatttgg 25448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 1405635 - 1405576
Alignment:
Q  158 attgagatttttctttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||| | ||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  1405635 attgagatttgtttttatctactacatctacaatgtatatgacccgtgcggcagcacggg 1405576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 8539723 - 8539769
Alignment:
Q  171 tttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  8539723 tttgtctactacatctacaatgtatatgacccgtgcggcagcacggg 8539769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 8657123 - 8657077
Alignment:
Q  171 tttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||||||  |||||||||||||||| ||||||||| |||||    
T  8657123 tttgtctactacacttacaatgtatatgacccgtgcggcagcacggg 8657077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 2266684 - 2266727
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaag-aatgaagtaaca 2266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 5134444 - 5134476
Alignment:
Q  83 taaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||| |||||||||||||||||    
T  5134444 taaggtgaataagtggggtgtctgaggttcgaa 5134476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 10585039 - 10584996
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaag-aatgaagtaaca 10584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 12597578 - 12597535
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaag-aatgaagtaaca 12597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 15044639 - 15044682
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaag-aatgaagtaaca 15044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 17202348 - 17202391
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaag-aatgaagtaaca 17202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 17594733 - 17594776
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaag-aatgaagtaaca 17594776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19997580 - 19997623
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaag-aatgaagtaaca 19997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 22730709 - 22730749
Alignment:
Q  80 ttttaaggtgaataagtgtggtgtctgaggttcgaatttca 120  Q
    |||||||||||||||||| |||||| |||||||||| ||||    
T  22730709 ttttaaggtgaataagtggggtgtccgaggttcgaacttca 22730749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 28099911 - 28099868
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaag-aatgaagtaaca 28099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 33035590 - 33035626
Alignment:
Q  158 attgagatttttctttgtctactacatctacaatgta 194  Q
    |||||||||| | ||||||||||||||||||||||||    
T  33035590 attgagatttgtttttgtctactacatctacaatgta 33035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 33645858 - 33645901
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaag-aatgaagtaaca 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 4e-69; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 26948796 - 26949014
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26948796 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctga 26948894  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  26948895 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 26948994  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  26948995 gacccgtgcggcagcacggg 26949014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 36076685 - 36076467
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36076685 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 36076587  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
     ||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  36076586 agttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatat 36076487  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  36076486 gacccgtgcggcagcacggg 36076467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 4584665 - 4584447
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4584665 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 4584567  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||| |||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  4584566 ggttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 4584467  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  4584466 gacccgtgcggcagcacggg 4584447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 20671247 - 20671465
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20671247 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 20671345  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  20671346 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 20671445  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||  ||| ||||| |||||    
T  20671446 gactcgtgtggcagcacggg 20671465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 8 - 216
Target Start/End: Original strand, 31488409 - 31488626
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31488409 ccaataatataacattgacatataattttaacaaaagaa-taaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 31488507  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  31488508 ggttcgaattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 31488607  T
Q  198 gacctgtgcggcagaacgg 216  Q
     ||| ||||||||| ||||    
T  31488608 aacccgtgcggcagcacgg 31488626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 8 - 210
Target Start/End: Original strand, 39146438 - 39146649
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39146438 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 39146536  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||||||| |||||           |||||||||| | |||||||||||||||||||||||||||    
T  39146537 ggttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatat 39146636  T
Q  198 gacctgtgcggca 210  Q
    |||| ||||||||    
T  39146637 gacccgtgcggca 39146649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 45558115 - 45557910
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45558115 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 45558017  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||           |||||||||| | ||||||||||||||||||||| |||||    
T  45558016 ggttcgaatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatat 45557917  T
Q  198 gacctgt 204  Q
    |||||||    
T  45557916 gacctgt 45557910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 12264198 - 12264416
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  12264198 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 12264296  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  12264297 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 12264396  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  12264397 gacccgtgcggcagcacggg 12264416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 38654158 - 38653940
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  38654158 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 38654060  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  38654059 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 38653960  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  38653959 gacccgtgcggcagcacggg 38653940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 43363842 - 43363624
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  43363842 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 43363744  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  43363743 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 43363644  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  43363643 gacccgtgcggcagcacggg 43363624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 49672560 - 49672778
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  49672560 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 49672658  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  49672659 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 49672758  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  49672759 gacccgtgcggcagcacggg 49672778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 1941951 - 1941733
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| ||| |||||||    
T  1941951 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctga 1941853  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  1941852 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 1941753  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  1941752 gacccgtgcggcagcacggg 1941733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 3898420 - 3898638
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  3898420 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 3898518  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||| |||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  3898519 ggttcaaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatat 3898618  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  3898619 gacccgtgcggcagcacggg 3898638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 21098302 - 21098520
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  21098302 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 21098400  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||| || |||||||||||||||    
T  21098401 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatat 21098500  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  21098501 gacccgtgcggcagcacggg 21098520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 34121353 - 34121571
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  34121353 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 34121451  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| || |||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  34121452 ggttcgaattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 34121551  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  34121552 gacccgtgcggcagcacggg 34121571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 49506580 - 49506362
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  49506580 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 49506482  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  49506481 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 49506382  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  49506381 gacccgtgcggcagtacggg 49506362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 24119205 - 24119350
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24119205 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 24119303  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcatt 154  Q
    |||| ||||| |||||||||||| |||||||||| | ||||||||||    
T  24119304 ggtttgaattccaacatctgcatatatttgggaccatatatttcatt 24119350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 49478206 - 49478351
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49478206 ccaataatataacattgacatataattttaataaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 49478304  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcatt 154  Q
    |||||||||| |||||| ||||| |||||||||| ||||||||||||    
T  49478305 ggttcgaattccaacatttgcatatatttgggaccacatatttcatt 49478351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 54073025 - 54073246
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  54073025 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 54073123  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatg---ta 194  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| ||||||||||   ||    
T  54073124 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtacta 54073223  T
Q  195 tatgacctgtgcggcagaacggg 217  Q
    ||||||| ||||||||| |||||    
T  54073224 tatgacccgtgcggcagcacggg 54073246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 55041820 - 55041596
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaat------taatatttttaaggtgaataagtgtggt 101  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||      ||||||||||||||||||||||||||||    
T  55041820 ccaataatataacattgacatataattttaacaaaagag-tgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggt 55041722  T
Q  102 gtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaat 191  Q
    ||||||||||||||||  ||||||||||| ||||||| || ||||||||||||||           |||||||||| | |||||||||||||||||||||    
T  55041721 gtctgaggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 55041622  T
Q  192 gtatatgacctgtgcggcagaacggg 217  Q
    |||||||||| |||||| || |||||    
T  55041621 gtatatgacccgtgcggtagcacggg 55041596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 217
Target Start/End: Complemental strand, 40014834 - 40014666
Alignment:
Q  59 acgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct-- 156  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||      
T  40014834 acgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctct 40014735  T
Q  157 --------gattgagatttttctttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
             |||||||||| | ||||| || || ||||||||||||||||||| ||||||||| |||||    
T  40014734 ttgatatgcattgagatttgtttttgtttattatatctacaatgtatatgacccgtgcggcagcacggg 40014666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 26052309 - 26052236
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttt 82  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  26052309 ccaataatataacattgacatataattttaacaaaag-aatgaagtaacacacgattgataaaaattaatatttt 26052236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 26051469 - 26051334
Alignment:
Q  74 taatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtattt-gggactacatatttcattct----------gattga 162  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| || |||| ||||| ||||| ||||||||||||||           |||||    
T  26051469 taatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattga 26051370  T
Q  163 gatttttctttgtctactacatctacaatgtatatg 198  Q
    ||||| | ||||||||||||||||||||||||||||    
T  26051369 gatttgtttttgtctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 6460240 - 6460181
Alignment:
Q  158 attgagatttttctttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  6460240 attgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacggg 6460181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 37099714 - 37099760
Alignment:
Q  171 tttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||||||  |||||||||||||||| ||||||||| |||||    
T  37099714 tttgtctactacacttacaatgtatatgacccgtgcggcagcacggg 37099760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 21098219 - 21098263
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaa 58  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaag-aatgaagtaacaa 21098263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 205
Target Start/End: Complemental strand, 23210394 - 23210365
Alignment:
Q  176 ctactacatctacaatgtatatgacctgtg 205  Q
    ||||||||||||||||||||||||||||||    
T  23210394 ctactacatctacaatgtatatgacctgtg 23210365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 1942033 - 1941990
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaag-aatgaagtaaca 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3898338 - 3898381
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaag-aatgaagtaaca 3898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 12264115 - 12264158
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaag-aatgaagtaaca 12264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 20671166 - 20671209
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaag-aatgaagtaaca 20671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 26052392 - 26052349
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaag-aatgaagtaaca 26052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 26948689 - 26948732
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaag-aatgaagtaaca 26948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 31488329 - 31488372
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaag-aatgaagtaaca 31488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 34121271 - 34121314
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaag-aatgaagtaaca 34121314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 38654241 - 38654198
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaag-aatgaagtaaca 38654198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 43363924 - 43363881
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaag-aatgaagtaaca 43363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 43566806 - 43566838
Alignment:
Q  83 taaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||| |||||||||||||||||    
T  43566806 taaggtgaataagtggggtgtctgaggttcgaa 43566838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 45558196 - 45558153
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  45558196 aatataacattaacatataatttttacaaaa-aaatgaagtaaca 45558153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 49478124 - 49478167
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaag-aatgaagtaaca 49478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 49672478 - 49672521
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaag-aatgaagtaaca 49672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 50724456 - 50724420
Alignment:
Q  79 tttttaaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  50724456 tttttaaggtgaataagtggggtgtccgaggttcgaa 50724420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 50788392 - 50788428
Alignment:
Q  79 tttttaaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  50788392 tttttaaggtgaataagtggggtgtccgaggttcgaa 50788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 55041901 - 55041858
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaag-aatgaagtaaca 55041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 7e-68; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 16905177 - 16904965
Alignment:
Q  14 atataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16905177 atataacattgacatataattttaacaaaagaa-tgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 16905079  T
Q  114 aatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacctg 203  Q
    |||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||||||||||||||||||||||| |    
T  16905078 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccg 16904979  T
Q  204 tgcggcagaacggg 217  Q
    |||||||| |||||    
T  16904978 tgcggcagcacggg 16904965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 46256032 - 46256250
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46256032 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 46256130  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||| |||| |||||||||||| |||||||||| |||||||| |||||           |||||||||| | |||||||||||||||||||||||||||    
T  46256131 ggttccaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 46256230  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  46256231 gacccgtgcggcagcacggg 46256250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 33139702 - 33139484
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33139702 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctga 33139604  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||||||| |||||           |||||||||| | ||||||||||| |||||||||||||||    
T  33139603 ggttcgaattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatat 33139504  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  33139503 gacccgtgcggcagcacggg 33139484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 37591035 - 37590817
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  37591035 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 37590937  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||||||||||||||||||||| |||||||||| |||| ||| |||||           ||||||||||   |||||||||||||||||||||||||||    
T  37590936 ggttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatat 37590837  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  37590836 gacccgtgcggcagcacggg 37590817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 44376310 - 44376092
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44376310 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 44376212  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||| ||| |||| ||| |||||           |||||||||| | |||||||||||||||||||||||||||    
T  44376211 ggttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 44376112  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  44376111 gacccgtgcggcagcacggg 44376092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 12090691 - 12090472
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  | |||||||| |||||||||||    
T  12090691 ccaataatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctga 12090592  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||| ||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  12090591 ggttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 12090492  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  12090491 gacccgtgcggcagcacggg 12090472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 52434622 - 52434840
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  52434622 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 52434720  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  52434721 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 52434820  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  52434821 gacccgtgcggcagcacggg 52434840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 16918119 - 16917907
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  16918119 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 16918021  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  16918020 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 16917921  T
Q  198 gacctgtgcggcag 211  Q
    |||| |||||||||    
T  16917920 gacccgtgcggcag 16917907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 35760585 - 35760797
Alignment:
Q  14 atataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  35760585 atataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcg 35760683  T
Q  114 aatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacctg 203  Q
    |||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||| ||||||| ||||||||||||||||||  |    
T  35760684 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatgactcg 35760783  T
Q  204 tgcggcagaacggg 217  Q
    |||||||| |||||    
T  35760784 tgcggcagcacggg 35760797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 30825153 - 30824935
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  30825153 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 30825055  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| ||||||| || ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  30825054 ggttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 30824955  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  30824954 gacccgtgcggcagcacggg 30824935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 45977221 - 45977074
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  45977221 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 45977123  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| ||||| |||| ||||||||||||||    
T  45977122 ggttcgaattccaacatctgcatatatttaggaccacatatttcattct 45977074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 53143493 - 53143275
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  53143493 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 53143395  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||| || |||||||||||||||    
T  53143394 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatat 53143295  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  53143294 gacccgtgcggcagcacggg 53143275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 216
Target Start/End: Original strand, 41387124 - 41387341
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41387124 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctga 41387222  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||||||||||| ||||||||| |||||||||| |||| ||| |||||           |||||||||| | ||||||||||| |||||||||||||||    
T  41387223 ggttcgaatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 41387322  T
Q  198 gacctgtgcggcagaacgg 216  Q
    |||| || |||||| ||||    
T  41387323 gacccgtacggcagcacgg 41387341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 37651664 - 37651882
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| ||||||| |||    
T  37651664 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttga 37651762  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||| ||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  37651763 ggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatat 37651862  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  37651863 gacccgtgcggcagcacggg 37651882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 45782660 - 45782513
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45782660 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 45782562  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    ||||| |||| |||||||| ||| ||||| |||| ||||||||||||||    
T  45782561 ggttcaaattccaacatcttcatatatttaggaccacatatttcattct 45782513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 48118762 - 48118615
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||    
T  48118762 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttga 48118664  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  48118663 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 48118615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 39058588 - 39058376
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  39058588 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctga 39058490  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| ||||||||  || |||||||||| ||||||||||||||           ||| | |||| | ||||||||||| |||||||||||||||    
T  39058489 ggttcgaattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatat 39058390  T
Q  198 gacctgtgcggcag 211  Q
    |||| |||||||||    
T  39058389 gacccgtgcggcag 39058376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 31966200 - 31966053
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  31966200 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 31966102  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  31966101 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 31966053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 31628718 - 31628510
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||    
T  31628718 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatga 31628620  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||| ||| |||||||| |||||           |||||||| | | ||||||||| |||||||||||||||||    
T  31628619 ggttcgaattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatat 31628520  T
Q  198 gacctgtgcg 207  Q
    |||| |||||    
T  31628519 gacccgtgcg 31628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 52098422 - 52098274
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaatt-aatatttttaaggtgaataagtgtggtgtctg 106  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  52098422 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctg 52098324  T
Q  107 aggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    | ||| ||||| |||||||||||| |||||||||| ||||||||||||||    
T  52098323 aagtttgaattccaacatctgcatatatttgggaccacatatttcattct 52098274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 47143031 - 47142813
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||| ||||||||| |||||||||||||||||||| |||||||||| || || |||||||||||||||||||||||||||||||  ||||||||||    
T  47143031 ccaataatttaacattgagatataattttaacaaaagaa-tgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctga 47142933  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||||||||  ||||||||||| |||||| ||| |||||| |||||||           |||||||||| | |||||||||||||||||||||||||||    
T  47142932 ggttcgaattctaacatctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 47142833  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  47142832 gaccagtgcggcagcacggg 47142813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 50229933 - 50229790
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaa-ttaatatttttaaggtgaataagtgtggtgtctgaggtt 111  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  50229933 aatataacattgacatataattttaacaaaagaa-tgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggtt 50229835  T
Q  112 cgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||| |||||||||||| ||||| |||| |||| |||||||||    
T  50229834 cgaattccaacatctgcatatattttggaccacatgtttcattct 50229790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 54624955 - 54625095
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||    
T  54624955 ccaataatataacattgacatataattttaacaaag--aatgaagtaaca------tgataaaaattaatatttttaaggtgaataagtgtggtgtctga 54625046  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  54625047 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 54625095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 34684653 - 34684606
Alignment:
Q  83 taaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcat 130  Q
    ||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  34684653 taaggtgaataagtggggtgtctgaggttcgaattccaacctctgcat 34684606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 6481589 - 6481626
Alignment:
Q  78 atttttaaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    |||||||||||||||||||| || ||||||||||||||    
T  6481589 atttttaaggtgaataagtggggcgtctgaggttcgaa 6481626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 12090773 - 12090730
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaag-aatgaagtaaca 12090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 16905261 - 16905218
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaag-aatgaagtaaca 16905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 16918201 - 16918158
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaag-aatgaagtaaca 16918158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 23935032 - 23935068
Alignment:
Q  79 tttttaaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  23935032 tttttaaggagaataagtggggtgtctgaggttcgaa 23935068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 30825235 - 30825192
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaag-aatgaagtaaca 30825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 31966282 - 31966239
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaag-aatgaagtaaca 31966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 37997852 - 37997888
Alignment:
Q  79 tttttaaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  37997852 tttttaaggtgaataagtggggtgtctggggttcgaa 37997888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 39058665 - 39058622
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaag-aatgaagtaaca 39058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 45977307 - 45977264
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaag-aatgaagtaaca 45977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 47143113 - 47143070
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaag-aatgaagtaaca 47143070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 48118845 - 48118802
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaag-aatgaagtaaca 48118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 50229744 - 50229712
Alignment:
Q  158 attgagatttttctttgtctactacatctacaa 190  Q
    |||||||||||| ||||||||||||||||||||    
T  50229744 attgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 52098503 - 52098460
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaag-aatgaagtaaca 52098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 52434540 - 52434583
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaag-aatgaagtaaca 52434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 53143577 - 53143534
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaag-aatgaagtaaca 53143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 54624879 - 54624922
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaag-aatgaagtaaca 54624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 11725188 - 11725406
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11725188 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 11725286  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||| ||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  11725287 ggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 11725386  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| |||| |||| |||||    
T  11725387 gacccgtgcagcagcacggg 11725406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 18841902 - 18842120
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  18841902 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 18842000  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    | |||||||| |||||||||||| ||||| |||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  18842001 gattcgaattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatat 18842100  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| |||||||||||||||    
T  18842101 gacccgtgcggcagaacggg 18842120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 28582859 - 28583071
Alignment:
Q  14 atataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28582859 atataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 28582957  T
Q  114 aatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacctg 203  Q
    |||| |||||||||||| |||||| ||| ||||||||||||||           |||||||||| | ||| ||||||||||||||||||||||||||| |    
T  28582958 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccg 28583057  T
Q  204 tgcggcagaacggg 217  Q
    |||||||| |||||    
T  28583058 tgcggcagcacggg 28583071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 39257441 - 39257648
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39257441 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 39257539  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||| |||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  39257540 ggttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 39257639  T
Q  198 gacctgtgc 206  Q
    |||| ||||    
T  39257640 gacccgtgc 39257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 40026798 - 40027006
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40026798 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 40026896  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    ||||| |||| |||||||||||| |||||||||| |||||||||||| |           |||||||||| | |||||||||||||||||||||||||||    
T  40026897 ggttcaaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 40026996  T
Q  198 gacctgtgcg 207  Q
    |||| |||||    
T  40026997 gacccgtgcg 40027006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 15961130 - 15961348
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  15961130 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 15961228  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  15961229 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 15961328  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  15961329 gacccgtgcggcagcacggg 15961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 18997698 - 18997916
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  18997698 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 18997796  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  18997797 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 18997896  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  18997897 gacccgtgcggcagcacggg 18997916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 30474115 - 30473897
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  30474115 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 30474017  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  30474016 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 30473917  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  30473916 gacccgtgcggcagcacggg 30473897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 28274445 - 28274245
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28274445 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatga 28274347  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||| | |||||||||| ||||||||||||||           |||||||||| | ||||||| |||||||||||||||||||    
T  28274346 ggttcgaattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatat 28274247  T
Q  198 ga 199  Q
    ||    
T  28274246 ga 28274245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 8 - 210
Target Start/End: Original strand, 24408874 - 24409085
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24408874 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatga 24408972  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
     ||||||||| |||||||||||| |||||||||| |||||||||||| |           ||| |||||| | ||| |||||||||||||||||||||||    
T  24408973 tgttcgaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatat 24409072  T
Q  198 gacctgtgcggca 210  Q
    |||| ||||||||    
T  24409073 gacccgtgcggca 24409085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 8 - 210
Target Start/End: Complemental strand, 44832417 - 44832206
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  44832417 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 44832319  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  44832318 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 44832219  T
Q  198 gacctgtgcggca 210  Q
    |||| ||||||||    
T  44832218 gacccgtgcggca 44832206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 6299251 - 6299033
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  6299251 ccaataatataatattgacatataattttaacaaaggaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 6299153  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  6299152 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 6299053  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  6299052 gacccgtgcggcagcacggg 6299033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 10477935 - 10478153
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  10477935 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 10478033  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||| ||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  10478034 ggttcgaattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 10478133  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  10478134 gacccgtgcggcagcacggg 10478153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 18175379 - 18175597
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| ||| ||||||| |||||||||||||  ||||||||||||||||||||||    
T  18175379 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctga 18175477  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  18175478 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 18175577  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  18175578 gacccgtgcggcagcacggg 18175597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 18568863 - 18569081
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||    
T  18568863 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttga 18568961  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||||||| |||||           |||||||| | | ||||||||| |||||||||||||||||    
T  18568962 ggttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatat 18569061  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| |||||| || |||||    
T  18569062 gacccgtgcggtagcacggg 18569081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 19240661 - 19240808
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  19240661 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctga 19240759  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  19240760 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 19240808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 19313845 - 19313992
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  19313845 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctga 19313943  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  19313944 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 19313992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 19412829 - 19412977
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  19412829 ccaataatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctga 19412928  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  19412929 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 19412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 32111092 - 32110874
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  32111092 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 32110994  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| ||||||| || ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  32110993 ggttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 32110894  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  32110893 gacccgtgcggcagcacggg 32110874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 35122543 - 35122345
Alignment:
Q  18 aacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatt 117  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35122543 aacattgacatataattttaataaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaatt 35122445  T
Q  118 tcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacctgtgcg 207  Q
     |||||||||||| ||||| |||| ||||||||||||||           |||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  35122444 ccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcg 35122345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 996046 - 995828
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||  |||||||||| |||||||||||    
T  996046 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctga 995948  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||| ||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  995947 ggttcgaattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 995848  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  995847 gacccgtgcggcagcacggg 995828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 24004958 - 24004811
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  24004958 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 24004860  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    ||||||||||||||||||||||| |||||||||| |||| ||| |||||    
T  24004859 ggttcgaatttcaacatctgcatatatttgggaccacatgttttattct 24004811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 44836907 - 44837125
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||| ||||||||| |||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||    
T  44836907 ccaataatttaacattgagatataattttaacaaaagaa-tgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctga 44837005  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| ||||| |||| |||||||| |||||           |||||||||| | |||||||||||||||||||||||||||    
T  44837006 ggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgtatat 44837105  T
Q  198 gacctgtgcggcagaacggg 217  Q
     ||| ||||||||| |||||    
T  44837106 aacccgtgcggcagcacggg 44837125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 11142459 - 11142683
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataa------aaattaatatttttaaggtgaataagtgtggt 101  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||      ||||||||||||||||||||||||||||||||    
T  11142459 ccaataatataacactgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggt 11142557  T
Q  102 gtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaat 191  Q
    |||||||||||||||| |||||||||||| |||||||||  ||||||||||||||           |||||||||| | |||||||||||||||||||||    
T  11142558 gtctgaggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 11142657  T
Q  192 gtatatgacctgtgcggcagaacggg 217  Q
    |||||||| | ||||||||| |||||    
T  11142658 gtatatgatccgtgcggcagcacggg 11142683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 45 - 217
Target Start/End: Original strand, 39997725 - 39997907
Alignment:
Q  45 aaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactac 144  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||    
T  39997725 aaatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccac 39997824  T
Q  145 atatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    ||||||||||||           |||||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  39997825 atatttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacggg 39997907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 18210850 - 18210656
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 112  Q
    |||||||||||||||||||| |||||||||||||  ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18210850 aatataacattgacatataactttaacaaaagaag-gaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 18210752  T
Q  113 gaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatg 198  Q
     |||| |||||||||||| |||||| ||| ||||||||||||||           |||||||||| | ||||||||||| ||||||||||||||||    
T  18210751 aaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 23353808 - 23353688
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||    
T  23353808 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctga 23353710  T
Q  108 ggttcgaatttcaacatctgca 129  Q
    |||||||||| |||||||||||    
T  23353709 ggttcgaattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 25875530 - 25875441
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgt 98  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  25875530 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgt 25875441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 18481991 - 18481929
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaa 71  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  18481991 ccaataatataacattgacatataattttaacaaaag-aatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 23353680 - 23353635
Alignment:
Q  172 ttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||    
T  23353680 ttgtctactacatctacaatgtatatgacccgtgcggcagcacggg 23353635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 39997660 - 39997708
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  39997660 ccaataatataacattgacatataatttttacaaaag-aatgaagtaaca 39997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 33155368 - 33155319
Alignment:
Q  81 tttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcat 130  Q
    |||||||||||||||||| ||||||| | |||||| | ||||||||||||    
T  33155368 tttaaggtgaataagtgtcgtgtctgggattcgaactccaacatctgcat 33155319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 6299333 - 6299290
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaag-aatgaagtaaca 6299290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 10477853 - 10477896
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaag-aatgaagtaaca 10477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 11142381 - 11142424
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaag-aatgaagtaaca 11142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 11725106 - 11725149
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaag-aatgaagtaaca 11725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 13702362 - 13702394
Alignment:
Q  83 taaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||| |||||||||||||||||    
T  13702362 taaggtgaataagtgaggtgtctgaggttcgaa 13702394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18175297 - 18175340
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaag-aatgaagtaaca 18175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18997616 - 18997659
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaag-aatgaagtaaca 18997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19240580 - 19240623
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaag-aatgaagtaaca 19240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19313764 - 19313807
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaag-aatgaagtaaca 19313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19412752 - 19412795
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaag-aatgaagtaaca 19412795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 23353889 - 23353846
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaag-aatgaagtaaca 23353846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 24408795 - 24408838
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaag-aatgaagtaaca 24408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 30474196 - 30474153
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaag-aatgaagtaaca 30474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 32111174 - 32111131
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaag-aatgaagtaaca 32111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 35122628 - 35122585
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaag-aatgaagtaaca 35122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 39997580 - 39997623
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaag-aatgaagtaaca 39997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 44832500 - 44832457
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaag-aatgaagtaaca 44832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 44836824 - 44836867
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaag-aatgaagtaaca 44836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 3e-64; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 19596594 - 19596376
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||    
T  19596594 ccaataatttaacattgacatataattttaacaaaagaa-tgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctga 19596496  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  19596495 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatat 19596396  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  19596395 gacccgtgcggcagcacggg 19596376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 8700259 - 8700477
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| || |||||||| |||    
T  8700259 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatga 8700357  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           ||||| |||| | |||||||||||||||||||||||||||    
T  8700358 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatat 8700457  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  8700458 gacccgtgcggcagcacggg 8700477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 31424007 - 31424225
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||    
T  31424007 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatga 31424105  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||| ||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  31424106 ggttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 31424205  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||  ||||||||| |||||    
T  31424206 gactcgtgcggcagcacggg 31424225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 26231490 - 26231272
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26231490 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctga 26231392  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| ||||||||| || |||||| ||| ||||||||||||||           ||||| |||| | |||||||||||||||||||||||||||    
T  26231391 ggttcgaattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatat 26231292  T
Q  198 gacctgtgcggcagaacggg 217  Q
     |||||||||| || |||||    
T  26231291 aacctgtgcggtagcacggg 26231272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 41664508 - 41664726
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  41664508 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 41664606  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  41664607 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 41664706  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  41664707 gacccgtgcggcagcacggg 41664726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 36279685 - 36279484
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36279685 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctga 36279587  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    | |||||||| |||||||||||| |||||||||| ||||||||||||||           ||||| |||| | |||||||||||||||||||||||||||    
T  36279586 gattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatat 36279487  T
Q  198 gac 200  Q
    |||    
T  36279486 gac 36279484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 6120550 - 6120768
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  6120550 ccaataatataatattgacatatagttttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 6120648  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  6120649 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 6120748  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  6120749 gacccgtgcggcagcacggg 6120768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 18351549 - 18351767
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| ||||||| |||    
T  18351549 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttga 18351647  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  18351648 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 18351747  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  18351748 gacccgtgcggcagcacggg 18351767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 41663235 - 41663453
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  41663235 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 41663333  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  41663334 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 41663433  T
Q  198 gacctgtgcggcagaacggg 217  Q
    ||||  |||||||| |||||    
T  41663434 gacccatgcggcagcacggg 41663453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 34007935 - 34007793
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 112  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  34007935 aatataacattgacatataattttaacaaaagaa-tgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttc 34007837  T
Q  113 gaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||    
T  34007836 gaattccaacatcggcatatatttgggactacatatttcattct 34007793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 42055197 - 42055404
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||  || |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42055197 ccaataatataacattgacata--atcttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 42055293  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||  || |||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  42055294 ggttcgaattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 42055393  T
Q  198 gacctgtgcgg 208  Q
    |||| ||||||    
T  42055394 gacccgtgcgg 42055404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 999462 - 999315
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  999462 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 999364  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||| ||| |||||||||| |||| ||| |||||    
T  999363 ggttcgaattccaacatctacatatatttgggaccacatgttttattct 999315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 44902080 - 44902297
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||   ||||||||| |||||||||||    
T  44902080 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaatta-tattttttttgtgaataagcgtggtgtctga 44902177  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  44902178 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 44902277  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  44902278 gacccgtgcggcagcacggg 44902297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 20544828 - 20545041
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 112  Q
    ||||||| |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||  |||||||||| ||||||| | ||||||    
T  20544828 aatataatattgacatataattttaacaaaagaa-tgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttc 20544926  T
Q  113 gaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacct 202  Q
    |||||  ||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||| | |||||||||||||||||||     
T  20544927 gaattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatgaccc 20545026  T
Q  203 gtgcggcagaacggg 217  Q
    ||||||||| |||||    
T  20545027 gtgcggcagcacggg 20545041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 210
Target Start/End: Original strand, 42441958 - 42442173
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||  |||||||||| |||||||||||    
T  42441958 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaaca--cgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 42442054  T
Q  108 gg------ttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaat 191  Q
    ||      |||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||    
T  42442055 ggttcgaattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaat 42442154  T
Q  192 gtatatgacctgtgcggca 210  Q
    |||||||||| ||||||||    
T  42442155 gtatatgacccgtgcggca 42442173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 16214822 - 16214969
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||| ||||| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||    
T  16214822 ccaataatgtaacactgacatataattttaacaaaagaa-tgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttaga 16214920  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| | |||| ||||| ||||| |||| ||||||||||||||    
T  16214921 ggttcgaattcctacatttgcatatattttggaccacatatttcattct 16214969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 692368 - 692231
Alignment:
Q  74 taatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgag 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||||           ||||||    
T  692368 taatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgag 692269  T
Q  164 atttttctttgtctactacatctacaatgtatatgacc 201  Q
    |||| | |||||||||||||| ||||||||||||||||    
T  692268 atttgtttttgtctactacatttacaatgtatatgacc 692231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 27944949 - 27944809
Alignment:
Q  87 gtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtc 176  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||    
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 27944850  T
Q  177 tactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    ||||| ||||||||||||||||||| ||||||||| |||||    
T  27944849 tactatatctacaatgtatatgacccgtgcggcagcacggg 27944809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 19596677 - 19596634
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaag-aatgaagtaaca 19596634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 31572451 - 31572497
Alignment:
Q  171 tttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||||||  |||||||||||||||| ||||||||| |||||    
T  31572451 tttgtctactacacttacaatgtatatgacccgtgcggcagcacggg 31572497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 3179409 - 3179377
Alignment:
Q  83 taaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||| |||||||||||||||||    
T  3179409 taaggtgaataagtggggtgtctgaggttcgaa 3179377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 6120467 - 6120510
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaag-aatgaagtaaca 6120510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 16214741 - 16214784
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaag-aatgaagtaaca 16214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18351467 - 18351510
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaag-aatgaagtaaca 18351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 26231570 - 26231527
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaag-aatgaagtaaca 26231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 31423924 - 31423967
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaag-aatgaagtaaca 31423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34008023 - 34007980
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaag-aatgaagtaaca 34007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 41663152 - 41663195
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaag-aatgaagtaaca 41663195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 42441876 - 42441919
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaag-aatgaagtaaca 42441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 6e-62; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 1395987 - 1396205
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1395987 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctga 1396085  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||  |||||||||| ||||||||||||||           |||||||||| | ||||||| |||||||| ||||||||||    
T  1396086 ggttcgaattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatat 1396185  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  1396186 gacccgtgcggcagcacggg 1396205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 20655280 - 20655062
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  20655280 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 20655182  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||| ||| |||||           |||||||||| | |||||||||||||||||||||||||||    
T  20655181 ggttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 20655082  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  20655081 gacccgtgcggcagcacggg 20655062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 207
Target Start/End: Original strand, 5479194 - 5479402
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5479194 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctga 5479292  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||| ||| |||||||||  ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  5479293 ggttcgaattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatat 5479392  T
Q  198 gacctgtgcg 207  Q
    |||| |||||    
T  5479393 gacccgtgcg 5479402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 20874686 - 20874904
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  20874686 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 20874784  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  20874785 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 20874884  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  20874885 gacccgtgcggcagcacggg 20874904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 27647928 - 27648075
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27647928 ccaacaatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 27648026  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| ||||||||| || |||||||||| ||||||||||||||    
T  27648027 ggttcgaattccaacatctgtatatatttgggaccacatatttcattct 27648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 34107569 - 34107351
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  34107569 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 34107471  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  34107470 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 34107371  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  34107370 gacccgtgcggcagcacggg 34107351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 34110650 - 34110868
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  34110650 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 34110748  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  34110749 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 34110848  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  34110849 gacccgtgcggcagcacggg 34110868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 38247096 - 38246878
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  38247096 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 38246998  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  38246997 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 38246898  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  38246897 gacccgtgcggcagcacggg 38246878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 33375760 - 33375980
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33375760 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 33375858  T
Q  108 ggttcgaatttcaacatctgcatgtatttggg--actacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtat 195  Q
    |||||||||| |||||||||||| ||||||||  || |||| ||| |||||           |||||||||| | |||||||||||||||||||||||||    
T  33375859 ggttcgaattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtat 33375958  T
Q  196 atgacctgtgcggcagaacggg 217  Q
    |||||| ||||||||| |||||    
T  33375959 atgacccgtgcggcagcacggg 33375980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 10729673 - 10729455
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||  |||||||||| |||||||||||    
T  10729673 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctga 10729575  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  10729574 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatat 10729475  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  10729474 gacccgtgcggcagcacggg 10729455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 16526537 - 16526319
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  16526537 ccaataatataatattgacatataattttaacaaaagaac-gaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 16526439  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  16526438 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 16526339  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  16526338 gacccgtgcggcagcacggg 16526319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 29275622 - 29275769
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29275622 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctga 29275720  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| |||| |||||||||    
T  29275721 ggttcgaattccaacatctgcatatatttgggaccacatgtttcattct 29275769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 24223395 - 24223183
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||| ||||||||||||| |||||||||||||| |||||||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  24223395 ccaataatatcacattgacatatacttttaacaaaagaa-tgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctga 24223297  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||| ||||||||    
T  24223296 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatat 24223197  T
Q  198 gacctgtgcggcag 211  Q
    |||| |||||||||    
T  24223196 gacccgtgcggcag 24223183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 2399171 - 2398955
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||  |||||||||| |||||||||||    
T  2399171 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaaca--cgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 2399075  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  2399074 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 2398975  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  2398974 gacccgtgcggcagcacggg 2398955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 1394717 - 1394570
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  1394717 ccaataatataacattgacatataaatttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttga 1394619  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  1394618 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 1394570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 6940734 - 6940587
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  6940734 ccaataatataacgttgacatataattttaacaaaagaa-tgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatga 6940636  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  6940635 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 6940587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 25099467 - 25099249
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  25099467 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctga 25099369  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||| ||| |||| ||| |||||           ||| |||||| | |||||||||||||||||||||||||||    
T  25099368 ggttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatat 25099269  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  25099268 gacccgtgcggcagcacggg 25099249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 25158557 - 25158339
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  25158557 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctga 25158459  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||| ||| |||| ||| |||||           ||| |||||| | |||||||||||||||||||||||||||    
T  25158458 ggttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatat 25158359  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  25158358 gacccgtgcggcagcacggg 25158339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 17373395 - 17373174
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  17373395 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 17373297  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatg---ta 194  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| ||||||||||   ||    
T  17373296 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtacta 17373197  T
Q  195 tatgacctgtgcggcagaacggg 217  Q
    ||||||| ||||||||| |||||    
T  17373196 tatgacccgtgcggcagcacggg 17373174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 33570538 - 33570391
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  33570538 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 33570440  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  33570439 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 33570391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 14141338 - 14141191
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  14141338 ccaataatataatattggcatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 14141240  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  14141239 ggttcgaattccaacatctgcatatatttgggaccacatatttcattct 14141191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 17913744 - 17913886
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 112  Q
    |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  17913744 aatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttc 17913842  T
Q  113 gaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    ||||| |||||||| ||| |||||||||| |||| ||| |||||    
T  17913843 gaattccaacatctacatatatttgggaccacatgttttattct 17913886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 40177120 - 40177257
Alignment:
Q  90 aataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctac 179  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||    
T  40177120 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctac 40177219  T
Q  180 tacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    || ||||||||||||||||||| ||||||||| |||||    
T  40177220 tatatctacaatgtatatgacccgtgcggcagcacggg 40177257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 18101954 - 18101991
Alignment:
Q  78 atttttaaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  18101954 atttttaaggtgaataagtggggtgtctggggttcgaa 18101991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 1395907 - 1395950
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaag-aatgaagtaaca 1395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 2399253 - 2399210
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaag-aatgaagtaaca 2399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 4316976 - 4317008
Alignment:
Q  83 taaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||||||||| |||||||||||    
T  4316976 taaggtgaataagtgtggtgtttgaggttcgaa 4317008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 5479115 - 5479158
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaag-aatgaagtaaca 5479158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 6940811 - 6940768
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaag-aatgaagtaaca 6940768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 10729755 - 10729712
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaag-aatgaagtaaca 10729712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 14141420 - 14141377
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaag-aatgaagtaaca 14141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 16526620 - 16526577
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaag-aatgaagtaaca 16526577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 17373477 - 17373434
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaag-aatgaagtaaca 17373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 20874604 - 20874647
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaag-aatgaagtaaca 20874647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 24223477 - 24223434
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaag-aatgaagtaaca 24223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 27647845 - 27647888
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaag-aatgaagtaaca 27647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33570621 - 33570578
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaag-aatgaagtaaca 33570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34107651 - 34107608
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaag-aatgaagtaaca 34107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 34110566 - 34110609
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaag-aatgaagtaaca 34110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 38247178 - 38247135
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaag-aatgaagtaaca 38247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 40177033 - 40177076
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaag-aatgaagtaaca 40177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 4e-60; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 8 - 210
Target Start/End: Original strand, 38444629 - 38444840
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  38444629 ccaataatataacattgacatataattttatcaaaagaa-tgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 38444727  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
     |||||||||||||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||||||||||||||||    
T  38444728 agttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 38444827  T
Q  198 gacctgtgcggca 210  Q
    ||||  |||||||    
T  38444828 gacccatgcggca 38444840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 4266379 - 4266597
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  4266379 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 4266477  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  4266478 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 4266577  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  4266578 gacccgtgcggcagcacggg 4266597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 23482938 - 23482720
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  23482938 ccaataatataacgttgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatga 23482840  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||| ||           |||||||||| | |||||||||||||||||||||||||||    
T  23482839 ggttcgaattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatat 23482740  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||  ||||||||| |||||    
T  23482739 gactcgtgcggcagcacggg 23482720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 34888917 - 34888699
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  34888917 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 34888819  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  34888818 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 34888719  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  34888718 gacccgtgcggcagcacggg 34888699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 38913978 - 38913760
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  38913978 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 38913880  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  38913879 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 38913780  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  38913779 gacccgtgcggcagcacggg 38913760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 9216029 - 9216247
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9216029 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctga 9216127  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||| ||| |||||           |||||||||| | ||| ||||||| |||||||||||||||    
T  9216128 ggttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatat 9216227  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  9216228 gacccgtgcggcagcacggg 9216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 35614065 - 35614283
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  35614065 ccaataatatgacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtctta 35614163  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
     ||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||||||||| ||||||||||||    
T  35614164 agttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatat 35614263  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| |||||| || |||||    
T  35614264 gacccgtgcggtagcacggg 35614283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 217
Target Start/End: Complemental strand, 52687339 - 52687127
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 112  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52687339 aatataacattgacatataattttaataaaa-aaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttc 52687242  T
Q  113 gaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacct 202  Q
    | ||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||| |||||||||||||||||||||||||     
T  52687241 ggattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatgaccc 52687142  T
Q  203 gtgcggcagaacggg 217  Q
    ||||| ||| |||||    
T  52687141 gtgcgacagcacggg 52687127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 18855463 - 18855246
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  18855463 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 18855365  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattctgattgagat---------ttttctttgtctactacatctacaatgtatatg 198  Q
    ||||||||||||||||||| ||| |||||||||| |||| ||| |||||  |||| ||         |||  |||||||||| |||||||||||||||||    
T  18855364 ggttcgaatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgatttgtctactgcatctacaatgtatatg 18855265  T
Q  199 acctgtgcggcagaacggg 217  Q
    ||| ||||||||| |||||    
T  18855264 acccgtgcggcagcacggg 18855246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 206
Target Start/End: Original strand, 50151058 - 50151265
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  50151058 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 50151156  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  50151157 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 50151256  T
Q  198 gacctgtgc 206  Q
    |||| ||||    
T  50151257 gacccgtgc 50151265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 2951597 - 2951379
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  2951597 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 2951499  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||||| ||||| || || || ||||||||||||    
T  2951498 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatat 2951399  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  2951398 gacccgtgcggcagcacggg 2951379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 7333942 - 7334089
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7333942 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctga 7334040  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||| ||||| |||||||||||| |||||||||| |||||||| |||||    
T  7334041 ggtttgaattccaacatctgcatatatttgggaccacatattttattct 7334089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 39727978 - 39728125
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39727978 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 39728076  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    |||||||||| |||||||||||| |||||||||| |||| ||| |||||    
T  39728077 ggttcgaattccaacatctgcatatatttgggaccacatgttttattct 39728125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 18706739 - 18706522
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  18706739 ccaataatataacgttgacatataattttaacaaaagaa-tgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatga 18706641  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| ||||| |||| ||||||||||||||           ||| |||||| | |||||||||||||||||||||||||||    
T  18706640 ggttcgaattccaacatctgcatatattt-ggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatat 18706542  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||  ||||||||| |||||    
T  18706541 gactcgtgcggcagcacggg 18706522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 1231813 - 1232012
Alignment:
Q  27 atataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatct 126  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||    
T  1231813 atataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatct 1231911  T
Q  127 gcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatatgacctgtgcggcagaacgg 216  Q
    |||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| || |||||||||||||||| ||||||||| ||||    
T  1231912 gcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatgacccgtgcggcagcacgg 1232011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 19768462 - 19768602
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  19768462 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctga 19768560  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatt 149  Q
    |||||||| |||||||||| ||||||||||| || |||||||    
T  19768561 ggttcgaaattcaacatctacatgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 35614819 - 35614960
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttc 112  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  35614819 aatatgacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttt-aaggtaaataagtgtggtgtctgaggttc 35614916  T
Q  113 gaatttcaacatctgcatgtatttgggactacatatttcattct 156  Q
    ||||| |||||||||||| |||||| ||| ||||||||||||||    
T  35614917 gaattccaacatctgcatatatttgagaccacatatttcattct 35614960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 19764771 - 19764634
Alignment:
Q  18 aacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatt 117  Q
    ||||||||||| |||||||||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19764771 aacattgacatgtaattttaacaaaataa-tgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatt 19764673  T
Q  118 tcaacatctgcatgtatttgggactacatatttcattct 156  Q
      ||||| ||||| |||||||||| ||||||||||||||    
T  19764672 caaacatttgcatatatttgggaccacatatttcattct 19764634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 2590333 - 2590461
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2590333 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 2590431  T
Q  108 ggttcgaatttcaacatctgcatgtatttgg 138  Q
    |||| |||||  ||||||||||| |||||||    
T  2590432 ggtt-gaattcgaacatctgcatatatttgg 2590461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 31018354 - 31018213
Alignment:
Q  86 ggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgt 175  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||    
T  31018354 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 31018255  T
Q  176 ctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||| ||||||||||||||||||| ||||||||| |||||    
T  31018254 ctactatatctacaatgtatatgacccgtgcggcagcacggg 31018213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 50326076 - 50326217
Alignment:
Q  86 ggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgt 175  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||    
T  50326076 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 50326175  T
Q  176 ctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||| ||||||||||||||||||| ||||||||| |||||    
T  50326176 ctactatatctacaatgtatatgacccgtgcggcagcacggg 50326217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 29942175 - 29942234
Alignment:
Q  158 attgagatttttctttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||| | ||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  29942175 attgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacggg 29942234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 50575990 - 50575954
Alignment:
Q  79 tttttaaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||||||| |||||||||||||||||    
T  50575990 tttttaaggtgaataagtgaggtgtctgaggttcgaa 50575954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 5061380 - 5061419
Alignment:
Q  158 attgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  5061380 attgagatttgtttttgtctactacatctacaatgtatat 5061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 29387946 - 29387900
Alignment:
Q  171 tttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||||||  |||||||||||||||| ||||||||| |||||    
T  29387946 tttgtctactacacttacaatgtatatgacccgtgcggcagtacggg 29387900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 52957055 - 52957092
Alignment:
Q  180 tacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  52957055 tacatctacaatgtatatgacccgtgcggcagcacggg 52957092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 1231725 - 1231768
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaag-aatgaagtaaca 1231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 2951679 - 2951636
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaag-aatgaagtaaca 2951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 4266297 - 4266340
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaag-aatgaagtaaca 4266340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 14009851 - 14009891
Alignment:
Q  171 tttgtctactacatctacaatgtatatgacctgtgcggcag 211  Q
    |||||||||||||| |||||| ||||||||| |||||||||    
T  14009851 tttgtctactacatttacaatttatatgacccgtgcggcag 14009891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 18706816 - 18706773
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaag-aatgaagtaaca 18706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 19764857 - 19764814
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaag-aatgaagtaaca 19764814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19768382 - 19768425
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaag-aatgaagtaaca 19768425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 23483015 - 23482972
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaag-aatgaagtaaca 23482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 24168585 - 24168621
Alignment:
Q  79 tttttaaggtgaataagtgtggtgtctgaggttcgaa 115  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  24168585 tttttaaggtgaataagtggggtgtctggggttcgaa 24168621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 35614734 - 35614777
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaag-aatgaagtaaca 35614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 38914060 - 38914017
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaag-aatgaagtaaca 38914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 52036353 - 52036310
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaag-aatgaagtaaca 52036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 19345 - 19563
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19345 ccaataatataacattgacatataattttaacaaaagaa-tgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 19443  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| |||||||| ||| |           |||||||||| | ||||||||||||||||||||||||||     
T  19444 ggttcgaattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgtatag 19543  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| || |||||| |||||    
T  19544 gacccgtacggcagcacggg 19563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 46272 - 46490
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  46272 ccaataatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctga 46370  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| |||||||||||||||    
T  46371 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 46470  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  46471 gacccgtgcggcagcacggg 46490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 149281 - 149063
Alignment:
Q  8 ccaagaatataacattgacatataattttaacaaaagaaatgaagtaacaaacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctga 107  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||    
T  149281 ccaataatataacgttgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttga 149183  T
Q  108 ggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtctactacatctacaatgtatat 197  Q
     ||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | ||||||||||| ||||||||| |||||    
T  149182 tgttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatttatat 149083  T
Q  198 gacctgtgcggcagaacggg 217  Q
    |||| ||||||||| |||||    
T  149082 gacccgtgcggcagcacggg 149063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 149361 - 149318
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaaatgaagtaaca 57  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||    
T  149361 aatataacattaacatataatttttacaaaag-aatgaagtaaca 149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 217
Target Start/End: Complemental strand, 6232 - 6074
Alignment:
Q  69 aaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------ga 158  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||| ||| ||||||||||||||           |    
T  6232 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6133  T
Q  159 ttgagatttttctttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    ||||||| | | ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  6132 ttgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcggcagcacggg 6074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 217
Target Start/End: Complemental strand, 6242 - 6084
Alignment:
Q  69 aaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------ga 158  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||| ||| ||||||||||||||           |    
T  6242 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6143  T
Q  159 ttgagatttttctttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    ||||||| | | ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  6142 ttgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcggcagcacggg 6084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 217
Target Start/End: Complemental strand, 5430 - 5291
Alignment:
Q  88 tgaataagtgtggtgtctgaggttcgaatttcaacatctgcatgtatttgggactacatatttcattct----------gattgagatttttctttgtct 177  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||           |||||||||| | |||||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  178 actacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    | || |||||||||||||||| || ||||||||| |||||    
T  5330 attatatctacaatgtatatgtcccgtgcggcagcacggg 5291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 1087 - 1133
Alignment:
Q  171 tttgtctactacatctacaatgtatatgacctgtgcggcagaacggg 217  Q
    |||||||||||||  |||||||||||||||| ||||||||| |||||    
T  1087 tttgtctactacacttacaatgtatatgacccgtgcggcagcacggg 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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