View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13672_low_16 (Length: 426)
Name: NF13672_low_16
Description: NF13672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13672_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 91 - 409
Target Start/End: Original strand, 26398914 - 26399229
Alignment:
| Q |
91 |
aaatcaatctcgatatattattattacttacaatatatttttatgagtgaaaaagtagttttgagttaagaatatcgtcgagatactaattattgtattt |
190 |
Q |
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| T |
26398914 |
aaatcaatctcgatatatt---attacttacaatatatttttatgagtgaagaagtagttttgagttaagaatatcgtcgagatactaattattgtattt |
26399010 |
T |
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| Q |
191 |
cagaaagcttttagaccgtgtctaacaacatttagcgatgaacaaaatctcttccataagcaatcgtacgttatacaagataaattacttgaagacaata |
290 |
Q |
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| T |
26399011 |
cagaaagcttttagaccgtgtttaacaacatttagcgatgaacaaaatctcttccataagcaatcgtacgttatacaagataaattacttgaagacaata |
26399110 |
T |
|
| Q |
291 |
attagtcattcacaaaattagaattaaaaaagatatcgaagacaatccatgcatttattaattttattgttggtaattgaagtacaaaataacatactac |
390 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26399111 |
attagtcattcacaaaattagaattaaaaaagatatcgaagacaatccatgcatttattaattttattgttggtaattgaagtacaaaataacatactat |
26399210 |
T |
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| Q |
391 |
aactttattgcatcatcct |
409 |
Q |
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||||||||||||||||||| |
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| T |
26399211 |
aactttattgcatcatcct |
26399229 |
T |
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