View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13672_low_37 (Length: 238)
Name: NF13672_low_37
Description: NF13672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13672_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 1179433 - 1179656
Alignment:
| Q |
1 |
tcaccgaagaatgaacgtgaatccttccaagttccggcgattgcgctggttccggtgctggtggtgttaccggagcttcaaccgcatgactagagccgcc |
100 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
1179433 |
tcaccgaagaatgaacgtgaatccttccaatttccggcgattgcgctggttccggtgctggtggttttaccggagcttcaaccgcatgactagagccgcc |
1179532 |
T |
|
| Q |
101 |
gccttgccttcctgtaacattgaacgaaaccgatcttggaaccggatcaagaaccgtttgattttgcttttccggcgaatgcggaatccttcttggagtg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1179533 |
gccttgccttcctgtaacattgaacgaaaccgatcttggaaccggatcaagaaccgtttgattttgcttttccggcgaatgcggaatccttcttggagtg |
1179632 |
T |
|
| Q |
201 |
aaatgacggtgatctggtgaatga |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
1179633 |
aaatgacggtgatctggtgaatga |
1179656 |
T |
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