View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13675_high_8 (Length: 464)

Name: NF13675_high_8
Description: NF13675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13675_high_8
NF13675_high_8
[»] chr7 (38 HSPs)
chr7 (2-230)||(42820756-42820984)
chr7 (289-441)||(23806229-23806382)
chr7 (287-447)||(9351129-9351289)
chr7 (289-447)||(42202161-42202320)
chr7 (225-288)||(42820616-42820679)
chr7 (366-447)||(21237247-21237328)
chr7 (355-444)||(23162108-23162198)
chr7 (289-449)||(23806786-23806947)
chr7 (359-440)||(45864500-45864582)
chr7 (355-447)||(42203033-42203122)
chr7 (359-447)||(24757887-24757976)
chr7 (279-445)||(1589375-1589544)
chr7 (288-447)||(31928548-31928705)
chr7 (289-435)||(45865562-45865709)
chr7 (287-435)||(1594033-1594183)
chr7 (381-445)||(33758118-33758182)
chr7 (287-435)||(5218946-5219096)
chr7 (359-432)||(48945255-48945329)
chr7 (379-435)||(5217857-5217914)
chr7 (359-435)||(3766626-3766704)
chr7 (290-447)||(21858405-21858563)
chr7 (379-447)||(27159283-27159352)
chr7 (394-446)||(25903599-25903651)
chr7 (379-445)||(9351569-9351633)
chr7 (277-334)||(21237357-21237414)
chr7 (278-347)||(23371438-23371507)
chr7 (288-347)||(14554446-14554506)
chr7 (283-347)||(23784578-23784642)
chr7 (403-447)||(28394896-28394940)
chr7 (379-435)||(48896574-48896630)
chr7 (287-346)||(1831979-1832038)
chr7 (279-334)||(9553390-9553445)
chr7 (359-447)||(48946201-48946288)
chr7 (285-334)||(19272461-19272510)
chr7 (379-435)||(38092127-38092184)
chr7 (306-347)||(44412315-44412356)
chr7 (379-411)||(38093265-38093297)
chr7 (279-347)||(39065373-39065441)
[»] chr3 (40 HSPs)
chr3 (288-454)||(2305395-2305561)
chr3 (287-447)||(11359455-11359616)
chr3 (289-445)||(11360247-11360405)
chr3 (281-447)||(48044624-48044793)
chr3 (359-440)||(24909452-24909533)
chr3 (289-447)||(54567642-54567800)
chr3 (283-435)||(18142106-18142260)
chr3 (280-441)||(46207104-46207266)
chr3 (285-440)||(18140936-18141091)
chr3 (355-447)||(25309061-25309153)
chr3 (359-447)||(31173483-31173571)
chr3 (359-446)||(4217747-4217835)
chr3 (289-435)||(29184890-29185038)
chr3 (287-449)||(46207861-46208027)
chr3 (359-447)||(38344278-38344367)
chr3 (359-447)||(43112936-43113025)
chr3 (370-432)||(38343266-38343328)
chr3 (365-432)||(4218779-4218847)
chr3 (383-435)||(51545116-51545168)
chr3 (285-399)||(2305155-2305270)
chr3 (288-433)||(34062247-34062396)
chr3 (289-431)||(41749386-41749529)
chr3 (365-435)||(48044348-48044418)
chr3 (379-436)||(49265200-49265257)
chr3 (379-435)||(54566601-54566658)
chr3 (359-446)||(24910831-24910918)
chr3 (380-440)||(34061438-34061498)
chr3 (281-440)||(43112018-43112179)
chr3 (314-435)||(48076348-48076470)
chr3 (287-347)||(49265290-49265350)
chr3 (285-347)||(7248861-7248924)
chr3 (287-330)||(38343182-38343225)
chr3 (365-432)||(45291496-45291563)
chr3 (379-441)||(18027911-18027972)
chr3 (380-429)||(29183823-29183873)
chr3 (379-419)||(31172386-31172427)
chr3 (287-347)||(37977504-37977565)
chr3 (285-334)||(45291416-45291465)
chr3 (388-420)||(24909597-24909629)
chr3 (282-334)||(54566505-54566556)
[»] chr1 (60 HSPs)
chr1 (286-449)||(44754497-44754663)
chr1 (289-449)||(25601812-25601975)
chr1 (292-447)||(49200795-49200949)
chr1 (293-441)||(44753302-44753452)
chr1 (289-447)||(49201281-49201442)
chr1 (283-447)||(31677641-31677807)
chr1 (289-447)||(47024495-47024654)
chr1 (359-447)||(31645305-31645393)
chr1 (287-449)||(34932368-34932530)
chr1 (365-447)||(20132459-20132541)
chr1 (366-441)||(25601008-25601082)
chr1 (370-449)||(34933260-34933339)
chr1 (373-435)||(4413997-4414059)
chr1 (284-447)||(24545452-24545617)
chr1 (288-435)||(26095813-26095962)
chr1 (355-447)||(47220979-47221071)
chr1 (365-435)||(1826343-1826414)
chr1 (287-447)||(47221841-47221997)
chr1 (359-435)||(24546540-24546617)
chr1 (379-435)||(13903313-13903369)
chr1 (283-441)||(26096932-26097090)
chr1 (379-447)||(51471078-51471146)
chr1 (366-435)||(31648496-31648566)
chr1 (358-435)||(48716392-48716470)
chr1 (290-443)||(6225268-6225422)
chr1 (379-435)||(47145241-47145298)
chr1 (360-435)||(1825363-1825439)
chr1 (379-435)||(16786061-16786117)
chr1 (279-347)||(34933333-34933401)
chr1 (379-435)||(35979492-35979548)
chr1 (289-432)||(51470129-51470274)
chr1 (383-446)||(13902156-13902219)
chr1 (379-441)||(33667526-33667589)
chr1 (359-432)||(32130715-32130789)
chr1 (366-447)||(33645862-33645944)
chr1 (366-446)||(40246355-40246436)
chr1 (355-447)||(28414806-28414898)
chr1 (379-432)||(4415086-4415139)
chr1 (358-435)||(14978381-14978456)
chr1 (391-432)||(47146299-47146340)
chr1 (381-432)||(31648168-31648220)
chr1 (395-447)||(32131826-32131878)
chr1 (379-446)||(35978811-35978879)
chr1 (287-347)||(52413119-52413179)
chr1 (355-433)||(388009-388088)
chr1 (288-339)||(22591279-22591330)
chr1 (288-345)||(25600929-25600988)
chr1 (368-418)||(5077781-5077831)
chr1 (284-334)||(14978721-14978771)
chr1 (288-334)||(16785721-16785767)
chr1 (279-347)||(4646747-4646816)
chr1 (287-347)||(14625368-14625429)
chr1 (378-447)||(26944287-26944355)
chr1 (379-440)||(31837793-31837854)
chr1 (288-347)||(33667630-33667691)
chr1 (286-347)||(33936077-33936137)
chr1 (290-347)||(50104540-50104597)
chr1 (291-346)||(1825296-1825352)
chr1 (278-334)||(13903383-13903439)
chr1 (282-330)||(44311201-44311249)
[»] chr6 (32 HSPs)
chr6 (304-449)||(30408603-30408748)
chr6 (279-441)||(18983908-18984072)
chr6 (283-441)||(30409573-30409732)
chr6 (288-449)||(3119319-3119482)
chr6 (288-447)||(22365833-22365991)
chr6 (288-441)||(3120240-3120392)
chr6 (289-449)||(12239796-12239959)
chr6 (279-447)||(3063381-3063550)
chr6 (287-449)||(18982912-18983079)
chr6 (285-446)||(29453702-29453862)
chr6 (287-438)||(2015053-2015201)
chr6 (289-435)||(14328555-14328703)
chr6 (289-435)||(14421565-14421713)
chr6 (283-435)||(14327363-14327516)
chr6 (283-435)||(14420373-14420526)
chr6 (285-435)||(32614451-32614603)
chr6 (379-447)||(26470153-26470221)
chr6 (379-441)||(29454618-29454680)
chr6 (359-445)||(20753353-20753440)
chr6 (366-447)||(26469084-26469164)
chr6 (359-435)||(3062262-3062337)
chr6 (288-433)||(26644603-26644747)
chr6 (288-433)||(26750569-26750713)
chr6 (359-428)||(23270126-23270196)
chr6 (380-447)||(28189506-28189573)
chr6 (283-345)||(29942444-29942506)
chr6 (379-432)||(32614262-32614316)
chr6 (287-334)||(16129492-16129539)
chr6 (379-429)||(20754488-20754539)
chr6 (287-330)||(22366234-22366277)
chr6 (286-347)||(7017067-7017128)
chr6 (291-423)||(16130384-16130517)
[»] scaffold0007 (2 HSPs)
scaffold0007 (279-441)||(14819-14984)
scaffold0007 (287-449)||(15965-16130)
[»] chr5 (27 HSPs)
chr5 (285-441)||(5699751-5699908)
chr5 (285-449)||(5700559-5700724)
chr5 (291-447)||(23932353-23932510)
chr5 (290-427)||(28819537-28819676)
chr5 (359-435)||(28820465-28820541)
chr5 (291-447)||(11465891-11466049)
chr5 (286-435)||(19601176-19601327)
chr5 (359-435)||(4602916-4602993)
chr5 (287-435)||(9751586-9751735)
chr5 (304-428)||(34407809-34407935)
chr5 (355-447)||(11466598-11466692)
chr5 (289-435)||(35599312-35599461)
chr5 (366-432)||(4602247-4602314)
chr5 (288-447)||(15395543-15395702)
chr5 (290-435)||(35600447-35600595)
chr5 (358-435)||(32145841-32145919)
chr5 (379-435)||(9750538-9750595)
chr5 (359-435)||(11890009-11890086)
chr5 (379-447)||(32144954-32145022)
chr5 (359-435)||(19600044-19600121)
chr5 (367-440)||(29320196-29320265)
chr5 (379-446)||(29321202-29321270)
chr5 (355-449)||(12823610-12823703)
chr5 (284-334)||(19599965-19600016)
chr5 (358-447)||(13948475-13948563)
chr5 (287-347)||(26034843-26034904)
chr5 (288-347)||(15061821-15061881)
[»] chr8 (36 HSPs)
chr8 (282-449)||(37402477-37402647)
chr8 (289-441)||(37403362-37403517)
chr8 (289-447)||(6819195-6819356)
chr8 (286-446)||(6819980-6820142)
chr8 (288-441)||(5873686-5873839)
chr8 (288-447)||(39513866-39514024)
chr8 (288-441)||(5874621-5874776)
chr8 (290-447)||(34901503-34901662)
chr8 (285-429)||(40701927-40702071)
chr8 (366-435)||(2270199-2270268)
chr8 (360-435)||(35322379-35322455)
chr8 (380-443)||(35009126-35009189)
chr8 (359-449)||(28223625-28223713)
chr8 (379-447)||(34503314-34503381)
chr8 (379-445)||(39515018-39515085)
chr8 (359-435)||(34902646-34902723)
chr8 (379-435)||(27407463-27407519)
chr8 (365-435)||(2269120-2269191)
chr8 (379-429)||(27408567-27408618)
chr8 (365-435)||(31986139-31986210)
chr8 (355-447)||(28222785-28222878)
chr8 (359-435)||(31985084-31985161)
chr8 (278-347)||(29309554-29309624)
chr8 (288-334)||(35862748-35862794)
chr8 (290-346)||(28561435-28561491)
chr8 (290-346)||(28566933-28566989)
chr8 (372-432)||(35321283-35321343)
chr8 (379-435)||(39451596-39451652)
chr8 (288-339)||(35009951-35010002)
chr8 (283-334)||(43400665-43400716)
chr8 (288-334)||(39515134-39515180)
chr8 (306-347)||(5160310-5160351)
chr8 (285-346)||(21692605-21692666)
chr8 (287-347)||(3912479-3912539)
chr8 (280-347)||(27164656-27164724)
chr8 (279-347)||(34985321-34985389)
[»] chr4 (42 HSPs)
chr4 (290-447)||(54353367-54353525)
chr4 (289-435)||(34027104-34027251)
chr4 (379-449)||(47765343-47765414)
chr4 (359-447)||(550744-550833)
chr4 (359-432)||(44070154-44070227)
chr4 (293-446)||(47766068-47766221)
chr4 (288-447)||(41331768-41331930)
chr4 (378-449)||(20613789-20613860)
chr4 (359-447)||(7515686-7515775)
chr4 (291-447)||(12352356-12352514)
chr4 (304-413)||(24700307-24700416)
chr4 (366-435)||(48029489-48029558)
chr4 (355-445)||(41332638-41332728)
chr4 (289-447)||(2657987-2658148)
chr4 (288-432)||(34025913-34026059)
chr4 (379-435)||(48030185-48030242)
chr4 (292-347)||(20612969-20613025)
chr4 (370-441)||(20613019-20613091)
chr4 (368-435)||(54054293-54054361)
chr4 (289-340)||(24701207-24701258)
chr4 (365-435)||(51162152-51162223)
chr4 (379-441)||(2657242-2657303)
chr4 (359-447)||(44071198-44071287)
chr4 (369-432)||(937736-937800)
chr4 (379-431)||(3673272-3673324)
chr4 (380-447)||(43860809-43860876)
chr4 (289-345)||(54354190-54354248)
chr4 (379-423)||(4432909-4432954)
chr4 (380-432)||(51163931-51163984)
chr4 (379-434)||(7514660-7514716)
chr4 (287-347)||(21780120-21780180)
chr4 (396-447)||(3672581-3672632)
chr4 (291-346)||(47765284-47765339)
chr4 (284-334)||(29248237-29248287)
chr4 (284-447)||(37265209-37265369)
chr4 (405-447)||(43860627-43860669)
chr4 (287-347)||(20962192-20962253)
chr4 (287-347)||(50881420-50881481)
chr4 (379-435)||(54053660-54053717)
chr4 (304-347)||(27450094-27450138)
chr4 (380-432)||(39865892-39865944)
chr4 (283-347)||(46360892-46360956)
[»] chr2 (37 HSPs)
chr2 (286-447)||(15809273-15809435)
chr2 (306-443)||(15808743-15808881)
chr2 (283-435)||(15747745-15747898)
chr2 (288-447)||(22468124-22468283)
chr2 (288-447)||(22474345-22474504)
chr2 (288-447)||(33868474-33868634)
chr2 (355-447)||(1873609-1873701)
chr2 (289-435)||(44242265-44242412)
chr2 (366-447)||(22467061-22467143)
chr2 (287-447)||(15481487-15481649)
chr2 (379-447)||(18532818-18532886)
chr2 (292-441)||(4024874-4025025)
chr2 (379-446)||(28141781-28141849)
chr2 (288-447)||(16647764-16647922)
chr2 (369-435)||(28461145-28461211)
chr2 (284-447)||(45323791-45323955)
chr2 (287-447)||(15748906-15749067)
chr2 (359-435)||(11829992-11830067)
chr2 (285-435)||(44241093-44241244)
chr2 (355-441)||(18531958-18532044)
chr2 (290-435)||(34404500-34404646)
chr2 (379-447)||(16647147-16647216)
chr2 (382-446)||(28142788-28142853)
chr2 (379-430)||(22292310-22292361)
chr2 (355-422)||(33869365-33869432)
chr2 (277-347)||(17328324-17328394)
chr2 (288-334)||(38528504-38528550)
chr2 (287-347)||(23834465-23834525)
chr2 (304-347)||(5558237-5558280)
chr2 (284-334)||(28462505-28462556)
chr2 (385-435)||(38528572-38528623)
chr2 (288-346)||(22116154-22116212)
chr2 (386-435)||(28462401-28462451)
chr2 (279-340)||(16577353-16577414)
chr2 (381-446)||(20473945-20474010)
chr2 (380-444)||(22294219-22294284)
chr2 (288-347)||(30371384-30371444)
[»] scaffold0725 (2 HSPs)
scaffold0725 (287-435)||(3912-4062)
scaffold0725 (359-435)||(4865-4942)
[»] scaffold1122 (1 HSPs)
scaffold1122 (289-449)||(292-452)
[»] scaffold0039 (2 HSPs)
scaffold0039 (358-435)||(111453-111529)
scaffold0039 (287-334)||(110407-110455)
[»] scaffold0136 (3 HSPs)
scaffold0136 (359-440)||(36647-36730)
scaffold0136 (379-441)||(35689-35751)
scaffold0136 (288-347)||(35598-35658)
[»] scaffold0014 (2 HSPs)
scaffold0014 (365-435)||(228497-228568)
scaffold0014 (359-435)||(227442-227519)
[»] scaffold0450 (1 HSPs)
scaffold0450 (288-347)||(7858-7917)
[»] scaffold0098 (1 HSPs)
scaffold0098 (380-445)||(42842-42907)
[»] scaffold0095 (1 HSPs)
scaffold0095 (379-435)||(10446-10502)
[»] scaffold0369 (1 HSPs)
scaffold0369 (382-441)||(9842-9901)


Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 42820984 - 42820756
Alignment:
Q  2 gatattcattataacaattaacaactgataaatgacagataccaattagtcaactgtacaacagaattagtgctactaaccgaaattattttcaggagaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42820984 gatattcattataacaattaacaactgataaatgacagataccaattagtcaactgtacaacagaattagtgctactaaccgaaattattttcaggagaa 42820885  T
Q  102 acttaggcaaaccgtcattcttcatcgtcttctcatttcaagtgttcccaaattcagctaacatgtctgtatcttgttcatttctcaaaatgattagatg 201  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  42820884 acttaggcaaaccgtcattcttcatcgtcttctaatttcaagtgttcccaaattcagctaacatgtctgtatcctgttaatttctcaaaatgattagatg 42820785  T
Q  202 gtttatttgaaaagataaaatacaaatat 230  Q
    |||||||||||||||||||||||||||||    
T  42820784 gtttatttgaaaagataaaatacaaatat 42820756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 289 - 441
Target Start/End: Original strand, 23806229 - 23806382
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtttt 388  Q
    |||||||||||| | |||||||||||||||| |||||||||| |||  |||||||||||       |||||||| |||||||||||||| ||||||||||    
T  23806229 gggttaataggcttttaccccctgcaatataggtcacttttgatttttcccctgtaaaatttttttgtcagatttcgtccttgtaaaaattttttgtttt 23806328  T
Q  389 ggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    | ||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  23806329 gaaaaacccccataggccagctgactgtgcattttcgctgatgtggcacgctga 23806382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 287 - 447
Target Start/End: Original strand, 9351129 - 9351289
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||||||||| | || |||||||||||||  ||||||||||||| ||| |||||| |       |||||||| ||||||| |||   |||||||||    
T  9351129 aagggttaataggcttttatcccctgcaatatagatcacttttggttttccctctgtaatatttttttgtcagatttcgtccttttaatttatttttgtt 9351228  T
Q  387 ttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||| |||||||||||||||||||| || ||||| |||||||||||| |||||||||||    
T  9351229 ttggaataccccctaggccagctgactgtgtattttcgctgatgtggcatgctgagtcacc 9351289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 289 - 447
Target Start/End: Original strand, 42202161 - 42202320
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa-nnnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||||| || |||||||||||||||| |||||||||| ||||||||||||||||        ||||| || ||||||||||||   || ||||||    
T  42202161 gggttaataggtctttaccccctgcaatataggtcacttttgatttcccccctgtaaaatattttttgtcaggtttcgtccttgtaaatttttcttgttt 42202260  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| |||||||||||||  ||||| || ||||| |||||||||||||| |||||||||    
T  42202261 tggaataccccctaggccaattgactgtgtattttcgctgatgtggcacgatgagtcacc 42202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 42820679 - 42820616
Alignment:
Q  225 aaatatttaatacactaaattatttttgtctttctcttttcaaattgagcttacatttatttaa 288  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42820679 aaatatttaatacactaaattatttttgtctttctctcttcaaattgagcttacatttatttaa 42820616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 366 - 447
Target Start/End: Complemental strand, 21237328 - 21237247
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||||| |||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||    
T  21237328 tccttgtaaaatatttttgttttgaaaaaccccctaggccaactgactgtgcatttttgctgatgtggcatgctgtgtcacc 21237247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 355 - 444
Target Start/End: Complemental strand, 23162198 - 23162108
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtc 444  Q
    ||||||||||||||||||||    |||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  23162198 gtcagattccgtccttgtaatttttttttgttttggaatacccccctaggccagctgactatgcattttcgctgatgtggcacgttgagtc 23162108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 449
Target Start/End: Complemental strand, 23806947 - 23806786
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtttt 388  Q
    |||||||||| ||| |||||||   |||||| |||||||||||||| |||| ||| |||       |||| ||||||||||||||||   ||||||||||    
T  23806947 gggttaatagacctttacccccgataatataggtcacttttggttttcccc-tgtgaaatttttttgtcaaattccgtccttgtaaattttttttgtttt 23806849  T
Q  389 ggaaaaccccc--taggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    |||||||||||  ||||  |||| ||| |||||||| ||||||||||||||||||||||||||    
T  23806848 ggaaaaccccccctaggttagctaactgtgcattttcgctgatgtggcacgctgagtcaccat 23806786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 359 - 440
Target Start/End: Original strand, 45864500 - 45864582
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggcacgctg 440  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||||||||| ||||    
T  45864500 gattcggtccttgtaaaaaatttttgttttggaaaaaccccctagaccagctgactgtgcatttttgcagatgtggcatgctg 45864582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 355 - 447
Target Start/End: Complemental strand, 42203122 - 42203033
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||| ||||||||||||||   |||||||||||||| | |||||||| ||||||||| |||||||| |||||||||| |||||||||||||    
T  42203122 gtcagaatccgtccttgtaaa---tttttgttttggaataacccctaggtcagctgactgtgcattttcgctgatgtggtacgctgagtcacc 42203033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 24757976 - 24757887
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| ||||||||||||||  ||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||| |||| ||||||    
T  24757976 gattcggtccttgtaaaaaaaatttgttttggaaaacccccctagaccagctgactgtgcgtttttgctgatgtggcatgctgcgtcacc 24757887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 279 - 445
Target Start/End: Original strand, 1589375 - 1589544
Alignment:
Q  279 atttatttaagggttaataggcctctaccccc-tgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaa 376  Q
    ||||| ||||| |||||||||||| ||||||| || |||||| ||||||||||||||  ||||||||||||        |  |||||  |||||||||||    
T  1589375 atttaattaagagttaataggcctttacccccctgtaatataggtcacttttggttttgccccctgtaaaattttttttttcgattcgatccttgtaaaa 1589474  T
Q  377 aatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtca 445  Q
      | ||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||| |||| ||||    
T  1589475 tttgtttgttttggaaaacccccctaaaccagctgactgtgcatttttgctgatgtggcatgctgcgtca 1589544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 288 - 447
Target Start/End: Complemental strand, 31928705 - 31928548
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt-gtt 386  Q
    ||||||||||||||| |||||| || |||||| |||||||||||||  ||||||||||||       |||| ||| |||| ||||||    ||||| |||    
T  31928705 agggttaataggcctttacccc-tgtaatataagtcacttttggtt--ccccctgtaaaaaagttttgtcaaatttcgtcattgtaattttttttttgtt 31928609  T
Q  387 ttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||| ||||||||| |||||||||| || ||||| ||||||||||||| ||||||||||    
T  31928608 ttggaataccccctagaccagctgactgtgtattttcgctgatgtggcacactgagtcacc 31928548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 435
Target Start/End: Complemental strand, 45865709 - 45865562
Alignment:
Q  289 gggttaataggcctctaccccc-tgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||  ||||||||||||        |  ||||  |||||||||||   ||||||||    
T  45865709 gggttaataggcctctacccccctgtaatataggtcacttttggttttaccccctgtaaaaaataaa--ttggatttggtccttgtaaattttttttgtt 45865612  T
Q  387 ttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  45865611 ttggaaaaaccccctagaccagctgactgtgcatttttgctgatgtggca 45865562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 435
Target Start/End: Complemental strand, 1594183 - 1594033
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccc-cctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgt 385  Q
    ||||||||||||| || ||||||||| |||||| ||||||||||||||  || |||| ||||        |  ||||| |||||||||||   |||||||    
T  1594183 aagggttaataggtctttaccccctgtaatataggtcacttttggttttgcctcctgcaaaaaaaaaaatttggattcggtccttgtaaattttttttgt 1594084  T
Q  386 tttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||| |||||    
T  1594083 tttggaaaacccccctagaccagctgactgtgcatttttgctgatatggca 1594033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 445
Target Start/End: Complemental strand, 33758182 - 33758118
Alignment:
Q  381 tttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtca 445  Q
    |||||||||||| ||||||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  33758182 tttgttttggaataccccctagaccagctgactgtgtattttcgctgatgtggcacgctgagtca 33758118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 435
Target Start/End: Complemental strand, 5219096 - 5218946
Alignment:
Q  287 aagggttaataggcctctaccccc-tgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttg 384  Q
    |||||||||||||||| ||||||| || |||||| |||||||||| |||  ||||||||||||        |  ||||| ||| ||||||||  |||| |    
T  5219096 aagggttaataggcctttacccccctgtaatataggtcacttttgattttgccccctgtaaaaaaaaaatttg-gattcggtcattgtaaaattttttcg 5218998  T
Q  385 ttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  5218997 ttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggca 5218946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 432
Target Start/End: Original strand, 48945255 - 48945329
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtg 432  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||  |||||||||| ||||||||||||||||||    
T  48945255 gattcggtccttgtaaaaaaattttgttttgaaaaacccctctataccagctgactgtgcatttttgctgatgtg 48945329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 5217857 - 5217914
Alignment:
Q  379 tttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  5217857 tttttgttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggca 5217914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 435
Target Start/End: Complemental strand, 3766704 - 3766626
Alignment:
Q  359 gattccgtccttgtaaaaaatt-tttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| ||||||||||||||   |||||||||||||||||  ||| ||||||||||| |||||||||||||||||||||    
T  3766704 gattcggtccttgtaaaaaaaaatttgttttggaaaacccatctacgccagctgactgtgcatttttgctgatgtggca 3766626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 447
Target Start/End: Complemental strand, 21858563 - 21858405
Alignment:
Q  290 ggttaataggcctctaccccct-gcaatatatgtcacttttggtttcccccct-gtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||||||||| | ||| |||||||| ||||||||||||||   |||| |||||        |||||||| ||| ||||||||   |||||||||    
T  21858563 ggttaataggcctctatctccttgcaatataagtcacttttggttttttcccttgtaaattttttttgtcagatttcgttcttgtaaatt-tttttgttt 21858465  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| || |||||| | |||||||| || ||||| ||||||||| ||||||||||||||    
T  21858464 tggaatactccctagactagctgactgtgtattttcgctgatgtgacacgctgagtcacc 21858405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 27159352 - 27159283
Alignment:
Q  379 tttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||||| ||| |||| | |||||||| ||||||||||||||||||||| |||| ||||||    
T  27159352 tttttgttttggaaaatccctctagactagctgactgtgcatttttgctgatgtggcatgctgcgtcacc 27159283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 25903599 - 25903651
Alignment:
Q  394 accccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    ||||| ||||||| || ||||||||| ||||||||||||||||||||||||||    
T  25903599 accccataggccatctaactatgcatatttgctgatgtggcacgctgagtcac 25903651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 445
Target Start/End: Complemental strand, 9351633 - 9351569
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtca 445  Q
    |||||||||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| |||||||    
T  9351633 tttttgttttggaatacccc-taggc-agctgactgtgcattttcgctgatgtggcacgttgagtca 9351569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 21237414 - 21237357
Alignment:
Q  277 acatttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    |||| ||||||||||||||||||| | ||||||||  |||||| ||||||||||||||    
T  21237414 acatatatttaagggttaataggcatttaccccctataatataggtcacttttggttt 21237357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 23371438 - 23371507
Alignment:
Q  278 catttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    |||||| ||| ||||||||||| || ||||||||| |||||| |||| || |||||| ||||||||||||    
T  23371438 catttaattatgggttaataggtctttaccccctgtaatataggtcatttatggttttccccctgtaaaa 23371507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 14554506 - 14554446
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtca-cttttggtttcccccctgtaaaa 347  Q
    ||||||||||||||| ||||||||| |||||| ||||  ||||| ||||||||||||||||    
T  14554506 agggttaataggcctttaccccctgtaatataggtcattttttgttttcccccctgtaaaa 14554446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 23784578 - 23784642
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||||||||||||||| || ||||||||| |||||| |||| |  |||||| ||||||||||||    
T  23784578 atttaagggttaataggtctttaccccctgtaatataggtcattactggttttccccctgtaaaa 23784642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 447
Target Start/End: Complemental strand, 28394940 - 28394896
Alignment:
Q  403 gccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||    
T  28394940 gccaactgactatgcattttcgctgatgtggcacgctgcgtcacc 28394896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 48896574 - 48896630
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||| ||| | |||||||  ||||||||||| |||||||||||||||||||    
T  48896574 tttttgttttagaataacccctagagcagctgactatacatttttgctgatgtggca 48896630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 1832038 - 1831979
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaa 346  Q
    ||||||||||||| || ||||||||| |||||| | |||||||| ||| |||||||||||    
T  1832038 aagggttaatagggctttaccccctgtaatatagggcacttttgattttccccctgtaaa 1831979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 334
Target Start/End: Original strand, 9553390 - 9553445
Alignment:
Q  279 atttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    |||| |||||||||||||||| || ||||||||| |||||| | ||||||||||||    
T  9553390 atttttttaagggttaataggtctttaccccctgtaatatagggcacttttggttt 9553445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 48946288 - 48946201
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaacc-ccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| ||||||||||||  |||||||||||||||||| || ||| |||||||||  ||||   |||||||||||||| |||| ||||||    
T  48946288 gattcggtccttgtaaaatttttttgttttggaaaaccaccttagaccagctgaccgtgca--attgctgatgtggcatgctgcgtcacc 48946201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 19272510 - 19272461
Alignment:
Q  285 ttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||| || ||||||||| |||||| |||| |||||||||    
T  19272510 ttaagggttaataggtctttaccccctgtaatataggtcatttttggttt 19272461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 38092127 - 38092184
Alignment:
Q  379 tttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||||||||||| ||||| ||| ||| | ||||||||| |||||||||||    
T  38092127 tttttgttttggaaaaccccgctaggtcagttgattgtgcatttttactgatgtggca 38092184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 44412315 - 44412356
Alignment:
Q  306 ccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||||| |||||| |||| ||||||||||||||||||||||    
T  44412315 ccccctgtaatataggtcatttttggtttcccccctgtaaaa 44412356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 411
Target Start/End: Complemental strand, 38093297 - 38093265
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctga 411  Q
    |||||||||||||||||| ||||||||||||||    
T  38093297 tttttgttttggaaaaccacctaggccagctga 38093265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 39065373 - 39065441
Alignment:
Q  279 atttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    |||||||||||| |||||||| || ||||||||| |||||| |||| ||  |||||  |||||||||||    
T  39065373 atttatttaaggattaataggtctttaccccctgtaatataggtcatttccggtttttcccctgtaaaa 39065441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 4e-48; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 288 - 454
Target Start/End: Complemental strand, 2305561 - 2305395
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||| |||| |||||||||||||||| |||||||||||||| ||||||||||||        ||||||||||||||||||||   |||||||||    
T  2305561 agggttaataagcctttaccccctgcaatataggtcacttttggttttccccctgtaaaatttttttctcagattccgtccttgtaaattttttttgttt 2305462  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccatatttt 454  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| ||||    
T  2305461 tggaaaaccccctaggccagctgactgtgcattttcgctgatttggcacgctgagtcaccatttttt 2305395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 287 - 447
Target Start/End: Original strand, 11359455 - 11359616
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccct-gtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgt 385  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||        | |||||||||||||||||||| |||||||    
T  11359455 aagggttaataggcctttaccccctgcaatataggtcacttttggttttcccccttgtaaaattttttttttagattccgtccttgtaaaaattttttgt 11359554  T
Q  386 tttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||| ||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||    
T  11359555 tttgaaaaaccccctagctcagctgactgtgcattttcgctgatgtggcacgctgagtcacc 11359616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 289 - 445
Target Start/End: Complemental strand, 11360405 - 11360247
Alignment:
Q  289 gggttaataggcctctaccccc-tgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||        | ||||||||||||||||||||| |||||||    
T  11360405 gggttaataggcctttacccccctgcaatataggtcacttttggttttcccccctgtaaaatttttcttttagattccgtccttgtaaaaaaattttgtt 11360306  T
Q  387 ttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtca 445  Q
    ||| |||||||||||| |||||||| | |||||||| ||||||||||||||||||||||    
T  11360305 ttgaaaaaccccctagcccagctgaatgtgcattttcgctgatgtggcacgctgagtca 11360247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 281 - 447
Target Start/End: Complemental strand, 48044793 - 48044624
Alignment:
Q  281 ttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccc-cctgtaaaannnnnnngtcagattccgtccttgtaaaaaat 379  Q
    |||||||||||||||||||| | |||||||||||||||| |||| ||||||||| ||| ||||||||        |||||||| |||||||||||||| |    
T  48044793 ttatttaagggttaataggcttttaccccctgcaatataagtcatttttggttttccctcctgtaaattttttttgtcagatttcgtccttgtaaaaatt 48044694  T
Q  380 ttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctg-atgtggcacgctgagtcacc 447  Q
    ||||||||||||||||||| |||| |||||||||| ||| |||| | || ||||||||||||||||||||    
T  48044693 ttttgttttggaaaacccctctagaccagctgactgtgccttttcgttgaatgtggcacgctgagtcacc 48044624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 359 - 440
Target Start/End: Original strand, 24909452 - 24909533
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctg 440  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  24909452 gattcagtccttgtaaaaaatttttgttttggaaaaccccctagaccagctgactatgcatttttgctgatgtggcaagctg 24909533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 289 - 447
Target Start/End: Complemental strand, 54567800 - 54567642
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||||| || ||||||||| |||||| ||||||||||||||  |||||| |||||        |  ||||| ||||||||||||  |||||||||    
T  54567800 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctataaaaaaaaaatttg-gattcggtccttgtaaaatttttttgttt 54567702  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  54567701 tggaaaaccccctagaccagctgactgtgcatttttgctgatgtggcatgctgtgtcacc 54567642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 18142260 - 18142106
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattt 381  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||| ||| ||||||||||||        |  ||||  |||||||||||   |||    
T  18142260 atttaagggttaataggcctttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaaaattggattaggtccttgtaaatttttt 18142161  T
Q  382 ttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||| |||||||| |||||||| | |||||||||||||||||||||    
T  18142160 ttgttttggaaaacccccctagaccagctgattgtgcatttttgctgatgtggca 18142106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 280 - 441
Target Start/End: Original strand, 46207104 - 46207266
Alignment:
Q  280 tttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttccc-ccctgtaaaannnnnnngtcagattccgtccttgtaaaaaa 378  Q
    ||||| ||||||||||||| | | || ||||||||||||| |||||||||| ||| || |||| ||||         |||||||||||||||||||||      
T  46207104 tttatataagggttaatagacatttatcccctgcaatataggtcacttttgattttcctccctataaattttttttctcagattccgtccttgtaaaatt 46207203  T
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    ||||||||||| |||||||| |||| ||||||||| |||||||| || |||||||||||||||    
T  46207204 tttttgttttgaaaaaccccttaggtcagctgactgtgcattttcgcagatgtggcacgctga 46207266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 440
Target Start/End: Original strand, 18140936 - 18141091
Alignment:
Q  285 ttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttccc-ccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||||  | ||||||||||        | | |||| ||||||||||||  |||||    
T  18140936 ttaagggttaataggcctttaccccctgtaatataggtcacttttggttttgctccctgtaaaaaaaaaat-tga-attcggtccttgtaaaattttttt 18141033  T
Q  384 gttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctg 440  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||    
T  18141034 gttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgctg 18141091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 447
Target Start/End: Complemental strand, 25309153 - 25309061
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||| |||||||||||    |||||||||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  25309153 gtcagatttcgtccttgtaatttttttttgttttagaataccccctgggctagctgactatgcatttttgctgatgtggcacgctgagtcacc 25309061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 31173571 - 31173483
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| ||||||||||||  |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||| ||||||    
T  31173571 gattcagtccttgtaaaatttttttgttttggaaaaccccctagaccagctgactgtgcatttttgcagatgtggcatgctgcgtcacc 31173483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 446
Target Start/End: Original strand, 4217747 - 4217835
Alignment:
Q  359 gattccgtccttgtaaaaaatttt-tgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||| |||||| ||| ||||||||||||||||||||| |||| |||||    
T  4217747 gattcagtccttgtaaaaaattttttgttttggaaaaccccttagaccagctaactgtgcatttttgctgatgtggcatgctgcgtcac 4217835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 435
Target Start/End: Complemental strand, 29185038 - 29184890
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttcccc-cctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||||||| ||| ||||| |||||| ||||||||||||||  || |||||||||        |  |||||  |||||||||||  |||||||||    
T  29185038 gggttaataggcctttactccctgtaatataggtcacttttggttttgcctcctgtaaaaaaaaaaatttggattcgatccttgtaaaatttttttgttt 29184939  T
Q  388 tggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  29184938 tggaaaacccccctagaccagctgactgtgcatttttgctgatgtggca 29184890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 449
Target Start/End: Complemental strand, 46208027 - 46207861
Alignment:
Q  287 aagggttaataggcctctaccc-cctgcaatatatgtcacttttggtttccc-ccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattt-tt 383  Q
    ||||||||||| |||| ||||| ||||||||||| |||||||||| ||| || ||||||||         | ||||||||||||||||||||||    ||    
T  46208027 aagggttaataagcctttaccctcctgcaatataggtcacttttgattttcctccctgtaatttttttttgacagattccgtccttgtaaaaaaaaaatt 46207928  T
Q  384 gttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    |||||||||||||||| |||| ||||||||| |||||||| ||| |||||||||||||| |||||||    
T  46207927 gttttggaaaacccccctagggcagctgactgtgcattttcgctaatgtggcacgctgattcaccat 46207861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 38344367 - 38344278
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccc-cctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| ||||||||||||   |||||||||||||||||| ||||| |||||||||| |||||||||||||||||| || |||| ||||||    
T  38344367 gattcggtccttgtaaaattattttgttttggaaaaccctcctagaccagctgactgtgcatttttgctgatgtgacatgctgcgtcacc 38344278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 43113025 - 43112936
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| ||||||||||||  ||||||||||| ||||||||| ||  ||||||||||||||||||||| |||||||||| |||| ||||||    
T  43113025 gattcggtccttgtaaaatttttttgttttgaaaaacccccctaaaccagctgactatgcatttttgttgatgtggcatgctgcgtcacc 43112936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 38343266 - 38343328
Alignment:
Q  370 tgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtg 432  Q
    |||||||  |||||||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  38343266 tgtaaaatttttttgttttggaaaaccccatagaccagctgactgtgcatttttgctgatgtg 38343328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 365 - 432
Target Start/End: Complemental strand, 4218847 - 4218779
Alignment:
Q  365 gtccttgtaaaaaatttttgttttggaaaac-cccctaggccagctgactatgcatttttgctgatgtg 432  Q
    ||||||||||||| ||||||||||||||||| ||||||  |||||||||| | ||||||||||||||||    
T  4218847 gtccttgtaaaaattttttgttttggaaaacccccctaaaccagctgactgtacatttttgctgatgtg 4218779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 51545168 - 51545116
Alignment:
Q  383 tgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  51545168 tgttttggaataccccataggccagctgactatgcattttcgctgatgtggca 51545116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 399
Target Start/End: Original strand, 2305155 - 2305270
Alignment:
Q  285 ttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttccc-ccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    ||||||||||||||  || |||| ||||| ||||| |||| |||| ||||  | ||||||||||       |||||||||||||||||||||||| ||||    
T  2305155 ttaagggttaatagaactttacctcctgcgatataggtcattttttgtttttctccctgtaaaatgtttttgtcagattccgtccttgtaaaaaaatttt 2305254  T
Q  384 gttttggaaaaccccc 399  Q
    |||||| |||||||||    
T  2305255 gttttgaaaaaccccc 2305270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 433
Target Start/End: Complemental strand, 34062396 - 34062247
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatt---ttt 383  Q
    ||||||||| | ||| || |||||| |||||| ||||||||||||||  ||||||||||||       |||||||| |||||||||||    ||   |||    
T  34062396 agggttaattgacctttatcccctgtaatataggtcacttttggtttttccccctgtaaaatttttttgtcagatttcgtccttgtaattttttgttttt 34062297  T
Q  384 gttttggaaaaccccctaggccagctgactatgcatttttgctgatgtgg 433  Q
    ||||| ||| ||||||||| || ||||||| |||||||||||||||||||    
T  34062296 gttttagaataccccctagacctgctgactgtgcatttttgctgatgtgg 34062247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 431
Target Start/End: Original strand, 41749386 - 41749529
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttg-gtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||||||| |||||| || |||||| ||||||||||  |||| |||||||||||       |||||||| |||||||||||    |||||||||    
T  41749386 gggttaataggcctttaccccttgtaatataggtcacttttgattttctcccctgtaaaatttttatgtcagatttcgtccttgtaatttttttttgttt 41749485  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgt 431  Q
    | ||| |||||||| ||||| | | | |||||||| ||||||||    
T  41749486 tagaataccccctacgccagtttattgtgcattttcgctgatgt 41749529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 365 - 435
Target Start/End: Original strand, 48044348 - 48044418
Alignment:
Q  365 gtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||   || ||||| ||| ||||||| ||||||||||| |||||||||||||||||||||    
T  48044348 gtccttgtaaaaaaaaattattttgaaaacccccctaagccagctgactgtgcatttttgctgatgtggca 48044418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 436
Target Start/End: Complemental strand, 49265257 - 49265200
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcac 436  Q
    |||||||||| ||| |||||||||||  ||||||| ||||||||||||||||||||||    
T  49265257 tttttgttttagaataccccctaggcatgctgactgtgcatttttgctgatgtggcac 49265200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 54566601 - 54566658
Alignment:
Q  379 tttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||||| ||||||||    
T  54566601 tttttgttttggaaaacccccctagaccagctaactatgcatttttgctaatgtggca 54566658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 446
Target Start/End: Complemental strand, 24910918 - 24910831
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgca-tttttgctgatgtggcacgctgagtcac 446  Q
    ||||| ||||||||||||||   ||||| ||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||| |||||    
T  24910918 gattcggtccttgtaaaaaaaaattgttatggaaaaccccct-ggccagctgactgtgcattttttgctgatttggcatgctgcgtcac 24910831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 34061438 - 34061498
Alignment:
Q  380 ttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctg 440  Q
    ||||||||| ||| |||  ||||||||||||||| ||||||||||||||||||||| ||||    
T  34061438 ttttgttttagaataccgtctaggccagctgactgtgcatttttgctgatgtggcatgctg 34061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 440
Target Start/End: Original strand, 43112018 - 43112179
Alignment:
Q  281 ttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaat 379  Q
    |||||||||||||||||||||| |||| |||| ||||||  |||||||||||||  ||||||||||          |  ||||| |||||| |||    |    
T  43112018 ttatttaagggttaataggcctttacctcctgtaatataaatcacttttggttttaccccctgtaatttttttttttgggattcggtccttataattttt 43112117  T
Q  380 ttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctg 440  Q
    ||||||||||||||||||| |||| |||||||| | | ||||||||||||||||||| ||||    
T  43112118 ttttgttttggaaaacccctctagaccagctgattgtacatttttgctgatgtggcatgctg 43112179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 435
Target Start/End: Original strand, 48076348 - 48076470
Alignment:
Q  314 aatatatgtcacttttggtttcccc-cctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgac 412  Q
    |||||| |||||||||||||| ||| ||| |||||       |||||||| | |||||||||||  |||||||||| ||||||  | ||| |  ||||||    
T  48076348 aatataagtcacttttggttttccctcctctaaaaattttgtgtcagatttcatccttgtaaaatttttttgttttagaaaacttcatagacatgctgac 48076447  T
Q  413 tatgcatttttgctgatgtggca 435  Q
    | |||||||||||||||||||||    
T  48076448 tgtgcatttttgctgatgtggca 48076470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 49265350 - 49265290
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    |||||||||||||| | ||| | ||| |||||| |||||||||||||| ||||||||||||    
T  49265350 aagggttaataggcatttactctctgtaatataggtcacttttggttttccccctgtaaaa 49265290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 7248861 - 7248924
Alignment:
Q  285 ttaagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    |||||||||||||||||| ||||||||| ||||||  ||| |||||| ||| ||||||||||||    
T  7248861 ttaagggttaataggcctttaccccctgtaatatagatcatttttggttttgccccctgtaaaa 7248924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 38343182 - 38343225
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttg 330  Q
    |||||||||||||||| |||| |||| |||||||||||||||||    
T  38343182 aagggttaataggcctttacctcctgtaatatatgtcacttttg 38343225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 432
Target Start/End: Original strand, 45291496 - 45291563
Alignment:
Q  365 gtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtg 432  Q
    ||||||| ||||||  |||||||| ||| ||||||||||||| |||||| |||||||| ||| |||||    
T  45291496 gtccttgcaaaaaaaatttgttttagaataccccctaggccaactgactgtgcattttcgctaatgtg 45291563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 441
Target Start/End: Complemental strand, 18027972 - 18027911
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||||||||||| ||||| ||||||| |||||| || |||||  |||||||||||||||||    
T  18027972 tttttgttttggaatacccc-taggccaactgactgtgtattttcactgatgtggcacgctga 18027911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 29183823 - 29183873
Alignment:
Q  380 ttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgat 429  Q
    |||| ||||||||||||||| ||| |||||||||| |||||||||||||||    
T  29183823 tttttttttggaaaacccccctagaccagctgactgtgcatttttgctgat 29183873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 31172386 - 31172427
Alignment:
Q  379 tttttgttttggaaaa-ccccctaggccagctgactatgcat 419  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  31172386 tttttgttttggaaaacccccctagaccagctgactatgcat 31172427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 37977565 - 37977504
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    ||||||||||||| || ||||||||| |||||| | ||||||||| ||| ||||||||||||    
T  37977565 aagggttaataggtctttaccccctgtaatataggacacttttggttttgccccctgtaaaa 37977504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 45291416 - 45291465
Alignment:
Q  285 ttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||| |||  ||||||||| |||||| ||||||||||||||    
T  45291416 ttaagggttaatatgcccttaccccctgtaatataggtcacttttggttt 45291465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 420
Target Start/End: Original strand, 24909597 - 24909629
Alignment:
Q  388 tggaaaaccccctaggccagctgactatgcatt 420  Q
    |||||||||||||||||||||||||| ||||||    
T  24909597 tggaaaaccccctaggccagctgactgtgcatt 24909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 334
Target Start/End: Original strand, 54566505 - 54566556
Alignment:
Q  282 tatttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||||| ||| || |||||| |||||| ||||||||||||||    
T  54566505 tatttaagggttaatagaccttta-cccctgtaatataggtcacttttggttt 54566556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 3e-43; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 286 - 449
Target Start/End: Complemental strand, 44754663 - 44754497
Alignment:
Q  286 taagggttaataggcctctaccccc-tgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||| |||       ||||||||||||||||||||||  |||||    
T  44754663 taagggttaataggcctttacccccctgcaatataggtcacttttggttttcccccctgtgaaatttttttgtcagattccgtccttgtaaaattttttt 44754564  T
Q  384 gttttggaaaaccccct-aggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    ||||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  44754563 gttttggaaaatccccttaggccagctgactgtgcattttcgctgatgtggcacgctgagtcaccat 44754497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 289 - 449
Target Start/End: Complemental strand, 25601975 - 25601812
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatt-tttgtt 386  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| ||||||| |||||       ||| ||||||||||||||||||||   ||||||    
T  25601975 gggttaataggcctttaccccctgcaatataggtcacttttggttttcccccctataaaaaatttttgtccgattccgtccttgtaaaaaaaaatttgtt 25601876  T
Q  387 ttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    ||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  25601875 ttggaaaacccccctaggccagctgactgggcattttcgctgatgtggcacgctgagtcaccat 25601812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 292 - 447
Target Start/End: Original strand, 49200795 - 49200949
Alignment:
Q  292 ttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttgga 391  Q
    ||||||||| | |||||||||||||||| |||||||||||||| |||||| ||||        |||||||| |||||||||||||  |||||||||||||    
T  49200795 ttaataggcttttaccccctgcaatataggtcacttttggttttccccctctaaattttttttgtcagatttcgtccttgtaaaatttttttgttttgga 49200894  T
Q  392 aaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||    
T  49200895 aaacccc-taagccagctgactgtgcattttcgctgatgtggcacgctgagtcacc 49200949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 44753302 - 44753452
Alignment:
Q  293 taataggcctctaccccctgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttgga 391  Q
    |||||||| | |||||||||||||||| |||||||||||||| ||||||||| |||       |||||||||||||||||||||   |||||||||||||    
T  44753302 taataggcttttaccccctgcaatataggtcacttttggttttcccccctgtgaaatttttttgtcagattccgtccttgtaaattttttttgttttgga 44753401  T
Q  392 aaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  44753402 aaacccccctaggccagctgactgtgcattttcgctgatgtggcacgctga 44753452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 289 - 447
Target Start/End: Complemental strand, 49201442 - 49201281
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattt-ttgtt 386  Q
    |||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||| |||||||||||    |||||    
T  49201442 gggttaataggcttttaccccctgcaatataggtcacttttggttttcccccctgtaaattttttttgtcagattccgtacttgtaaaaaaaaaattgtt 49201343  T
Q  387 ttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  49201342 ttggaaaacccccctaggccagctgactgtgcattttcgctgatgtggcacgctgagtcacc 49201281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 447
Target Start/End: Original strand, 31677641 - 31677807
Alignment:
Q  283 atttaagggttaataggcctctac-cccctgcaatatatgtcacttttggtttccccc-ctgtaaaannnnnnngtcagattccgtccttgtaaaaaatt 380  Q
    ||||| |||||||||||||| ||  |||||||| |||| ||||||||||||||  ||| ||||||||       |||||||||||||||||||||   ||    
T  31677641 atttatgggttaataggcctttattcccctgcagtataggtcacttttggtttttccctctgtaaaaaatttttgtcagattccgtccttgtaaattttt 31677740  T
Q  381 tttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||| ||||||||| |||||||||| || |||||  |||||||||||||||||||||||    
T  31677741 tttgttttggaataccccctagaccagctgactgtgtattttcactgatgtggcacgctgagtcacc 31677807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 289 - 447
Target Start/End: Original strand, 47024495 - 47024654
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttccc-ccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||| || | ||| |||||||||||| |||||||||| |||  | |||||||||        ||||||||||||||||||||||||  |||||||    
T  47024495 gggttaataagcatttactccctgcaatataggtcacttttgatttttcaccctgtaaattttttttgtcagattccgtccttgtaaaaaaaatttgttt 47024594  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||| ||||||||||||||| |||||||| || ||||||| | |||||||||||    
T  47024595 tggaaaacccactaggccagctgactgtgcattttcgcagatgtggtatgctgagtcacc 47024654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 359 - 447
Target Start/End: Original strand, 31645305 - 31645393
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||| || |||| ||||||    
T  31645305 gattctgtccttgtaaaaaaattttgttttggaaaaccccctagaccagctgactgtgcatttttgctgatgtgacatgctgcgtcacc 31645393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 287 - 449
Target Start/End: Original strand, 34932368 - 34932530
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||||||||  | |||||||| ||||||| |||| |||| ||||  |||||||||||       ||||||||||||| ||||||||| ||||||||    
T  34932368 aagggttaataggttt-taccccctacaatataggtcattttttgtttttcccctgtaaaatttttttgtcagattccgtctttgtaaaaattttttgtt 34932466  T
Q  387 ttggaaaacc-ccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    |||||||||| || |||||| | ||| | |||||||| |||||||||||| |||||||||||||    
T  34932467 ttggaaaacctccataggccggttgattgtgcattttcgctgatgtggcatgctgagtcaccat 34932530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 365 - 447
Target Start/End: Original strand, 20132459 - 20132541
Alignment:
Q  365 gtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||||||  | |||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||    
T  20132459 gtccttgtaaaatttgtttgttttggaaaaccccctaggccagctggcaatgcatttttgctgatgtggcatgctgcgtcacc 20132541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 441
Target Start/End: Original strand, 25601008 - 25601082
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  25601008 tccttgtaaaaaatttttgttttg-aaacccccctaggccagctgactgtgcattttcgctgaggtggcacgctga 25601082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 449
Target Start/End: Complemental strand, 34933339 - 34933260
Alignment:
Q  370 tgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    |||||||  ||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||| |||||||||||||    
T  34933339 tgtaaaatttttttgttttggaaaaccccctaggccagttaactgtgcatttttgctgatatggcatgctgagtcaccat 34933260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 435
Target Start/End: Original strand, 4413997 - 4414059
Alignment:
Q  373 aaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  4413997 aaaaaaattttgttttggaaaaccccctaggccagctgactgtgcatttttgctaatgtggca 4414059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 284 - 447
Target Start/End: Original strand, 24545452 - 24545617
Alignment:
Q  284 tttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccc-cctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttt 382  Q
    ||||||||||||||||| | ||||||||  |||||| ||||||||||||||  || |||| ||||        |  ||| | ||||||||||||  ||||    
T  24545452 tttaagggttaataggcttttaccccctataatataggtcacttttggttttgcctcctgaaaaaaaataattttggatccagtccttgtaaaatttttt 24545551  T
Q  383 tgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  24545552 tgttttgaaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtcacc 24545617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 288 - 435
Target Start/End: Original strand, 26095813 - 26095962
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||||||| || ||||||||| |||||| ||||||| ||||||  ||||||||||||        |  ||||| ||||||||||||  ||||||||    
T  26095813 agggttaataggtctttaccccctgtaatataggtcacttatggttttgccccctgtaaaaaaaaattttttgattcggtccttgtaaaatttttttgtt 26095912  T
Q  387 ttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    ||| || |||||| ||| |||||||||| |||||||||||||||||||||    
T  26095913 ttgaaatacccccctagaccagctgactgtgcatttttgctgatgtggca 26095962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 355 - 447
Target Start/End: Original strand, 47220979 - 47221071
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||| | |||| ||| |||||||| |||||||| ||||  |||||||||    
T  47220979 gtcaaattccgtccttgtaaaatttttttgttttggaaaaccccctagcctagctaactgtgcattttcgctgatgtcgcacattgagtcacc 47221071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 365 - 435
Target Start/End: Complemental strand, 1826414 - 1826343
Alignment:
Q  365 gtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||||| |||||||||||||||||||| ||| |||| ||||| |||||||||||||||||||||    
T  1826414 gtccttgtaaaaaaattttgttttggaaaacccccttagaccagttgactgtgcatttttgctgatgtggca 1826343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 447
Target Start/End: Complemental strand, 47221997 - 47221841
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    ||||||||||||| || |||| ||||||||||| ||||||||||||||  |  |||||||        ||||||||| ||||||||||    ||||| ||    
T  47221997 aagggttaataggtctttacctcctgcaatataggtcacttttggtttttcttctgtaaa-tttttttgtcagattctgtccttgtaa----tttttttt 47221903  T
Q  387 ttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||| | ||| ||||||||||| ||||||||||||||||| |||||||| ||||||    
T  47221902 ttggaaaaccgctctaagccagctgactgtgcatttttgctgatgtagcacgctgggtcacc 47221841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 435
Target Start/End: Complemental strand, 24546617 - 24546540
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| |||||||||||   |||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  24546617 gattcggtccttgtaaattttttttgttttggaaaaaccccctagaccagctgactgtgcatttttgctgatgtggca 24546540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 435
Target Start/End: Complemental strand, 13903369 - 13903313
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  13903369 ttttttttttggaaaaccccccaggccagctgactgtgcatttttgctgatgtggca 13903313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 441
Target Start/End: Complemental strand, 26097090 - 26096932
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattt 381  Q
    ||||||||||||||||| || ||||||||| |||||| ||||||||||| ||| || ||||||||         |   |||| |||  |||||||  |||    
T  26097090 atttaagggttaataggtctttaccccctgtaatataggtcacttttggttttgcctcctgtaaatttttttttt--tattcggtctctgtaaaattttt 26096993  T
Q  382 ttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||||    
T  26096992 ttgttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggcgcgctga 26096932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 51471146 - 51471078
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||| ||| |||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||    
T  51471146 tttttgttttagaataccccctagggcagctgactctgcatttttgctgatgtggcatgctgtgtcacc 51471078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 435
Target Start/End: Complemental strand, 31648566 - 31648496
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||  ||||||||||||||||||||| ||  |||||||||| |||||||||||||||||||||    
T  31648566 tccttgtaaaatttttttgttttggaaaacccccctaaaccagctgactgtgcatttttgctgatgtggca 31648496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 435
Target Start/End: Original strand, 48716392 - 48716470
Alignment:
Q  358 agattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||| ||| ||||||||||   |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  48716392 agattcggtctttgtaaaaaaaaattgttttgaaaaacccccctagaccagctgactatgcatttttgctgatgtggca 48716470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 443
Target Start/End: Complemental strand, 6225422 - 6225268
Alignment:
Q  290 ggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnn-gtcagattccgtccttgtaaaaaatttttgtttt 388  Q
    |||||||||| || |||  ||||||||||| |||||||||||||| |||||||||||         |||| ||| |||| |||||||   ||||||| ||    
T  6225422 ggttaataggtctttacttcctgcaatataggtcacttttggttttccccctgtaaattttcttttgtcaaatttcgtcattgtaaattttttttgtatt 6225323  T
Q  389 ggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagt 443  Q
      || | |||||| ||||||||||| || ||||||||||||||||||||||||||    
T  6225322 aaaatagcccctaagccagctgactgtgtatttttgctgatgtggcacgctgagt 6225268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 47145241 - 47145298
Alignment:
Q  379 tttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  47145241 tttttgttttggaaaaccccgctagaccagctgactgtgcatttttgctgatgtggca 47145298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 360 - 435
Target Start/End: Original strand, 1825363 - 1825439
Alignment:
Q  360 attccgtccttgtaaaaaatttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||| ||||||||||||||  |||||||||||||| |||||||| |||| ||| | |||||||||||||||||||||    
T  1825363 attcggtccttgtaaaaaaaatttgttttggaaaacccccctagaccagttgagtgtgcatttttgctgatgtggca 1825439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 435
Target Start/End: Complemental strand, 16786117 - 16786061
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  16786117 tttttgttctggaaaaccccctaggccagttgactgtgcatttttgctaatgtggca 16786061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 34933401 - 34933333
Alignment:
Q  279 atttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    |||||||| |||| ||||| || | |||||||||||||||| |||||||||||||| ||||||||||||    
T  34933401 atttattttagggataataagcttttaccccctgcaatataggtcacttttggttttccccctgtaaaa 34933333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 435
Target Start/End: Complemental strand, 35979548 - 35979492
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||    
T  35979548 tttttgttttggcaaaccccctagaccagctgactgtgcatttttgctgatttggca 35979492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 432
Target Start/End: Original strand, 51470129 - 51470274
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttccccc-ctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||||| || ||||||||| |||||| ||||||||||||||  ||| ||||||||        | |||||| ||||||||||||||   ||||||    
T  51470129 gggttaataggtctttaccccctgtaatataagtcacttttggttttgccctctgtaaaaaaataaaattagattcggtccttgtaaaaaaaaattgttt 51470228  T
Q  388 tggaaaaccccc-taggccagctgactatgcatttttgctgatgtg 432  Q
    |||||||||||| ||| |||  ||||  ||||||||||||||||||    
T  51470229 tggaaaacccccatagaccaattgaccgtgcatttttgctgatgtg 51470274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 13902156 - 13902219
Alignment:
Q  383 tgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |||||||||| |||| |||||    
T  13902156 tgttttggaaaaccccctagaccagctgactgtgcatctttgttgatgtggcatgctgtgtcac 13902219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 441
Target Start/End: Complemental strand, 33667589 - 33667526
Alignment:
Q  379 tttttgttttggaaaaccccct-aggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||||||||||||||||||| || |||| ||||| |||||||||||||||||||| ||||||    
T  33667589 tttttgttttggaaaacccccttagaccagttgactgtgcatttttgctgatgtggcgcgctga 33667526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 432
Target Start/End: Original strand, 32130715 - 32130789
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtg 432  Q
    ||||| |||||| |||||  ||||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||    
T  32130715 gattcggtccttataaaatttttttgttttggaaaacacccgtagaccagctgactgtgcatttttgctgatgtg 32130789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 447
Target Start/End: Complemental strand, 33645944 - 33645862
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||   ||||||||||||||||  |||| ||||||||||||| |||||| ||||||||||| |||| ||||||    
T  33645944 tccttgtaaaaaaaaattgttttggaaaacccttctagaccagctgactatgtatttttactgatgtggcatgctgggtcacc 33645862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 446
Target Start/End: Original strand, 40246355 - 40246436
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    |||| ||||||  |||||||||| ||||||||| ||||||||| ||||| ||||||||||| |||||| |||| ||||||||    
T  40246355 tcctcgtaaaatttttttgttttagaaaacccccctaggccagttgactgtgcatttttgcagatgtgacacgttgagtcac 40246436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 447
Target Start/End: Original strand, 28414806 - 28414898
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||| | ||||||||||   |||||||| | ||| ||||||||| |  ||||||| ||||||||||||||||||||| |||| ||||||    
T  28414806 gtcagatttcatccttgtaaattttttttgttgtagaataccccctagccatgctgactgtgcatttttgctgatgtggcatgctgtgtcacc 28414898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 432
Target Start/End: Complemental strand, 4415139 - 4415086
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtg 432  Q
    |||||||||| ||| |||||||| | ||||||||| ||||||||||||||||||    
T  4415139 tttttgttttagaataccccctatgacagctgactgtgcatttttgctgatgtg 4415086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 435
Target Start/End: Original strand, 14978381 - 14978456
Alignment:
Q  358 agattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||| ||| |||||||||||||| ||||| ||| || || | || |||||||||||||||||||||||||||||||    
T  14978381 agattcagtctttgtaaaaaatttt-gttttagaatacgcc-tgggacagctgactatgcatttttgctgatgtggca 14978456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 47146340 - 47146299
Alignment:
Q  391 aaaaccccctaggccagctgactatgcatttttgctgatgtg 432  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  47146340 aaaaccccctagaccagctgactgtgcatttttgctgatgtg 47146299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 432
Target Start/End: Original strand, 31648168 - 31648220
Alignment:
Q  381 tttgttttggaaaacc-ccctaggccagctgactatgcatttttgctgatgtg 432  Q
    |||||||||||||||| |||||| |||||||||| ||||||||| ||||||||    
T  31648168 tttgttttggaaaaccgccctagaccagctgactgtgcatttttactgatgtg 31648220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 447
Target Start/End: Complemental strand, 32131878 - 32131826
Alignment:
Q  395 ccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||| |||||||||| ||||||||||||||| ||||| |||| ||||||    
T  32131878 ccccctagaccagctgactgtgcatttttgctgatttggcatgctgcgtcacc 32131826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 35978811 - 35978879
Alignment:
Q  379 tttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    |||| ||||||||||| ||||||||| ||||||||| ||||||||||  ||||||||| |||| |||||    
T  35978811 ttttggttttggaaaacccccctaggtcagctgactgtgcatttttgtagatgtggcatgctgtgtcac 35978879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 52413119 - 52413179
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    |||||||||| |  || ||||||||| |||||| |||| ||||||||||||||||||||||    
T  52413119 aagggttaatggtgctttaccccctgtaatataggtcatttttggtttcccccctgtaaaa 52413179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 433
Target Start/End: Original strand, 388009 - 388088
Alignment:
Q  355 gtcagattccgtccttgtaaa-aaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtgg 433  Q
    |||||||| ||||||||||||    |||||||||| ||| ||||| |||||||||||||| | |||||| ||||||||||    
T  388009 gtcagatttcgtccttgtaaatttttttttgttttagaataccccttaggccagctgactgtacattttcgctgatgtgg 388088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 22591279 - 22591330
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttccccc 339  Q
    ||||||||||||||| |||||| || |||||| |||||||||||||| ||||    
T  22591279 agggttaataggcctttaccccttgtaatataggtcacttttggttttcccc 22591330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 25600929 - 25600988
Alignment:
Q  288 agggttaataggcctctacccc-ctgcaatatatgtcacttttgg-tttcccccctgtaa 345  Q
    |||||||||||| || |||||| |||||||||| ||||||||||| ||||||||||||||    
T  25600929 agggttaataggtctttacccctctgcaatataggtcacttttggttttcccccctgtaa 25600988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 5077831 - 5077781
Alignment:
Q  368 cttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgca 418  Q
    |||||||||||  |||||||||||||||||||| | |||||||||| ||||    
T  5077831 cttgtaaaaaaaatttgttttggaaaaccccctggaccagctgactgtgca 5077781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 14978771 - 14978721
Alignment:
Q  284 tttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||||||| |||||||||  ||||| | ||||||||||||    
T  14978771 tttaagggttaataggcctttaccccctgttatataggacacttttggttt 14978721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 16785721 - 16785767
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||| ||||||||| ||| || ||||||||||||||    
T  16785721 agggttaataggcctttaccccctgtaatgtaggtcacttttggttt 16785767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 4646747 - 4646816
Alignment:
Q  279 atttatttaagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    |||| |||||||||||||||| || ||||||||  |||||| |||| |||||| ||||||| ||||||||    
T  4646747 atttttttaagggttaataggtctttaccccctctaatataagtcatttttggttttcccctctgtaaaa 4646816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 14625368 - 14625429
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    ||||||||||||| || ||||||||| |||||| | ||||||||| ||| ||||||||||||    
T  14625368 aagggttaataggtctttaccccctgtaatataggacacttttggttttgccccctgtaaaa 14625429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 26944355 - 26944287
Alignment:
Q  378 atttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||| || ||| |||||| ||||||||| || || || |||||| |||||||||||||||||    
T  26944355 atttttgttttgtaatacctcctaggtcagctgactgtgtatgttcgctgat-tggcacgctgagtcacc 26944287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 440
Target Start/End: Original strand, 31837793 - 31837854
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctg 440  Q
    ||||| ||||| ||||||||||||  ||||||||| || |||||| ||||||||||| ||||    
T  31837793 tttttattttgaaaaaccccctagatcagctgactgtgtatttttactgatgtggcatgctg 31837854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 33667691 - 33667630
Alignment:
Q  288 agggttaataggcctctac-cccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    ||||||||||||||| ||| |||||| |||||| ||||||||||| ||| ||||||||||||    
T  33667691 agggttaataggcctttacacccctgtaatataggtcacttttggttttgccccctgtaaaa 33667630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 33936137 - 33936077
Alignment:
Q  286 taagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||||||||||||  | ||||||||| |||||| ||||| ||||||||| |||||||||||    
T  33936137 taagggttaataggattttaccccctgtaatataggtcac-tttggtttcgcccctgtaaaa 33936077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 50104540 - 50104597
Alignment:
Q  290 ggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||||||||||| ||| ||||| || ||| |||||||||||||| |||||| |||||    
T  50104540 ggttaataggcctttacgccctgtaacataggtcacttttggttttccccctataaaa 50104597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 1825296 - 1825352
Alignment:
Q  291 gttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaa 346  Q
    ||||||||| || ||||||||| |||||| ||||||||||| ||| |||||||||||    
T  1825296 gttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaa 1825352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 13903439 - 13903383
Alignment:
Q  278 catttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||| || ||||||||||||  || ||||||||| |||||| ||||||||||||||    
T  13903439 cattttttaaagggttaatagatctttaccccctgtaatataggtcacttttggttt 13903383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 44311201 - 44311249
Alignment:
Q  282 tatttaagggttaataggcctctaccccctgcaatatatgtcacttttg 330  Q
    ||||| ||||||||||||||| ||||||||| |||||| | ||||||||    
T  44311201 tattttagggttaataggcctttaccccctgtaatataggacacttttg 44311249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 1e-42; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 304 - 449
Target Start/End: Original strand, 30408603 - 30408748
Alignment:
Q  304 taccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctagg 403  Q
    |||||||||||||||| |||||||||||||| ||||| || |||       ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  30408603 taccccctgcaatataggtcacttttggttttcccccggtgaaatttttttgtcagattccgtccttgtaaaatttttttgttttggaaaaccccctagg 30408702  T
Q  404 ccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    |||||||||| |||||||| |||||||||||| |||||||||||||    
T  30408703 ccagctgactgtgcattttcgctgatgtggcatgctgagtcaccat 30408748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 279 - 441
Target Start/End: Complemental strand, 18984072 - 18983908
Alignment:
Q  279 atttatttaagggttaataggcctctaccc-cctgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaa 376  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||| |||       || |||||||||||||||||||    
T  18984072 atttatttaagggttaataggcctttaccctcctgcaatataggtcacttttggttttcccccctgtgaaatttttttgttagattccgtccttgtaaaa 18983973  T
Q  377 aatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
      ||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  18983972 tttttttattttggaaaaccccctaggtcagctgactgtgcattttcgctgatgtggcacgctga 18983908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 283 - 441
Target Start/End: Complemental strand, 30409732 - 30409573
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattt 381  Q
    |||| ||||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||| |||       |||||||| ||||||||||||   |||    
T  30409732 attttagggttaataggcctttacctcctgcaatataggtcacttttggttttcccccctgtgaaatttttttgtcagatttcgtccttgtaaatttttt 30409633  T
Q  382 ttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  30409632 ttgttttggaaaaccccctaggccagctgactgtgcattttcgctgatgtggcacgctga 30409573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 288 - 449
Target Start/End: Original strand, 3119319 - 3119482
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcc-cccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    ||||||||||| | | || |||||||||||||  ||||||||||||| | ||||||| |||       ||||||||||||||||||||||| ||||||||    
T  3119319 agggttaatagacttttatcccctgcaatatagatcacttttggttttctcccctgtgaaatttttttgtcagattccgtccttgtaaaaattttttgtt 3119418  T
Q  387 ttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  3119419 ttggaaaacccccctaggccagctgactgtgcattttcgctgatgtggcacgctgagtcaccat 3119482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 288 - 447
Target Start/End: Original strand, 22365833 - 22365991
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||||||||| |||||||  ||||||| |||||||||||||| ||||||||||||       ||||||||| |||||||||||||| ||||||||    
T  22365833 agggttaataggcctttacccccctcaatataggtcacttttggttttccccctgtaaaaatttt--gtcagattctgtccttgtaaaaaaattttgttt 22365930  T
Q  388 tggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    | ||||||||| |||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  22365931 tagaaaaccccgctaggccaactgactgtgcattttcgctgatgtggcacgctgagtcacc 22365991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 288 - 441
Target Start/End: Complemental strand, 3120392 - 3120240
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||        |||| ||| |||||||| ||||  |||||||||    
T  3120392 agggttaataggcctttaccccctgcaatataggtcacttttggtttcccccctgtaaattttttttgtcatatttcgtccttg-aaaatttttttgttt 3120294  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    || |||||||||||||||||| |||| |||||||| ||||||||||||||||||    
T  3120293 tgaaaaaccccctaggccagcggactgtgcattttcgctgatgtggcacgctga 3120240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 289 - 449
Target Start/End: Complemental strand, 12239959 - 12239796
Alignment:
Q  289 gggttaataggcctctaccccc-tgcaatatatgtcacttttggtttcc-cccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||| | ||||||||||        ||||||||||||||||||||    ||||||||    
T  12239959 gggttaataggtctttacccccctgcaatatatgtcacttttggttttctcccctgtaaattttttttgtcagattccgtccttgtaatttttttttgtt 12239860  T
Q  387 ttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    ||||||||||||| |||||||||||||| |||||||  |||||||||||||| |||||||||||    
T  12239859 ttggaaaacccccctaggccagctgactgtgcatttccgctgatgtggcacggtgagtcaccat 12239796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 279 - 447
Target Start/End: Complemental strand, 3063550 - 3063381
Alignment:
Q  279 atttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccct-gtaaaannnnnnngtcagattccgtccttgtaaaaa 377  Q
    |||| |||||||||||||||| || ||||||||| |||||| ||||||||||||||  ||||| | ||||        |  ||||| ||||||||||||     
T  3063550 atttttttaagggttaataggtctttaccccctgtaatataggtcacttttggttttgccccttgaaaaaaaaaaaaattggattcggtccttgtaaaat 3063451  T
Q  378 atttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
     |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  3063450 ttttttgttttggaaaaccccctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtcacc 3063381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 449
Target Start/End: Original strand, 18982912 - 18983079
Alignment:
Q  287 aagggttaataggcctctaccccc-tgcaatatatgtcacttttggt-ttcccccctgtaaaannnnnnn-gtcaga-ttccgtccttgtaaaaaatttt 382  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||| |||        || ||| ||||||||||||||||  ||||    
T  18982912 aagggttaataggcctttacccccctgcaatataggtcacttttggtgttcccccctgtgaaattgtttttgttagaattccgtccttgtaaaatttttt 18983011  T
Q  383 tgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||| ||||    
T  18983012 tgttttggaaaacccccctaggccagctgactgtgcattttcgctgatgtggcacactgagtcgccat 18983079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 285 - 446
Target Start/End: Original strand, 29453702 - 29453862
Alignment:
Q  285 ttaagggttaataggcctctacccc-ctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    ||||||||||||||| || | || | ||||||||||||||||||| |||||||||  ||| |||       ||||||||||||||||||||||   ||||    
T  29453702 ttaagggttaataggtcttttcctctctgcaatatatgtcactttgggtttcccc--tgtgaaatttttttgtcagattccgtccttgtaaaattatttt 29453799  T
Q  384 gttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    |||||| ||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||    
T  29453800 gttttgaaaacccccataggccagctgactgtgcattttcgctgatgtggcacgctgagtcac 29453862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 287 - 438
Target Start/End: Original strand, 2015053 - 2015201
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||| ||||||| |||| ||||||||||| |||| ||||||||| |||||||||||        ||||||||||||||||||||||  ||||||||    
T  2015053 aagggttagtaggcctttacctcctgcaatataagtcatttttggttttccccctgtaaa-tttttttgtcagattccgtccttgtaaaa--tttttgtt 2015149  T
Q  387 ttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgc 438  Q
    |||  |||||| ||| |||| ||||||||||||||| |||||||||||||||    
T  2015150 ttgagaaaccctctaagccaactgactatgcattttcgctgatgtggcacgc 2015201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 435
Target Start/End: Complemental strand, 14328703 - 14328555
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||||| || ||||||||| |||||| ||||||||||||||  ||||||||||||        | ||||||  |||||||||||  |||||||||    
T  14328703 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaactttagattcgatccttgtaaaatttttttgttt 14328604  T
Q  388 tggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  14328603 tggaaaacccccctagaccagctgactgtgcatttttgctgatgtggca 14328555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 435
Target Start/End: Complemental strand, 14421713 - 14421565
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||||| || ||||||||| |||||| ||||||||||||||  ||||||||||||        | ||||||  |||||||||||  |||||||||    
T  14421713 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaactttagattcgatccttgtaaaatttttttgttt 14421614  T
Q  388 tggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  14421613 tggaaaacccccctagaccagctgactgtgcatttttgctgatgtggca 14421565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 14327363 - 14327516
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattt 381  Q
    |||||| ||||||||||||| ||||||||| |||||| ||||||||||||||  ||||||||||||        |  ||||| ||| ||||||||  |||    
T  14327363 atttaaaggttaataggcctttaccccctgtaatatacgtcacttttggttttgccccctgtaaaaaaaaaactttcgattcggtctttgtaaaattttt 14327462  T
Q  382 ttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||||| ||| |||||||||| |  ||||||||||||||||||    
T  14327463 ttgttttggaaaaccccttagaccagctgactgtatatttttgctgatgtggca 14327516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 14420373 - 14420526
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattt 381  Q
    |||||| ||||||||||||| ||||||||| |||||| ||||||||||||||  ||||||||||||        |  ||||| ||| ||||||||  |||    
T  14420373 atttaaaggttaataggcctttaccccctgtaatatacgtcacttttggttttgccccctgtaaaaaaaaaactttcgattcggtctttgtaaaattttt 14420472  T
Q  382 ttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||||| ||| |||||||||| |  ||||||||||||||||||    
T  14420473 ttgttttggaaaaccccttagaccagctgactgtatatttttgctgatgtggca 14420526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 435
Target Start/End: Complemental strand, 32614603 - 32614451
Alignment:
Q  285 ttaagggttaataggcctctac-cccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    |||||||||||||||||| ||| |||||| |||||||||||||||||||||  ||||| |||||        |  ||||| ||| |||||||||| ||||    
T  32614603 ttaagggttaataggcctttacacccctgtaatatatgtcacttttggttttgcccctataaaaaaaaatatttggattcggtctttgtaaaaaaatttt 32614504  T
Q  384 gttttggaaaacc-ccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||| ||||||||||| | ||  |||||||||| ||||||||||    
T  32614503 gttttggaaaaccaccctaggccagtttacagtgcatttttgttgatgtggca 32614451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 26470221 - 26470153
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| |||| ||||||    
T  26470221 tttttgttttggaaaaccccctagaccagttgactgtgcatttttgctgatgtggcatgctgcgtcacc 26470153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 441
Target Start/End: Complemental strand, 29454680 - 29454618
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  29454680 tttttgttttgaaaaaccccctaggccagctgactgtgcattttcgttgatgtggcacgctga 29454618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 359 - 445
Target Start/End: Original strand, 20753353 - 20753440
Alignment:
Q  359 gattccgtccttgtaaaaaat-ttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtca 445  Q
    ||||| ||||||||||||||  |||||||||| |||  ||||||| |||||||||| ||||||||||||||||||||| |||| ||||    
T  20753353 gattcggtccttgtaaaaaaaattttgttttgaaaactcccctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtca 20753440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 366 - 447
Target Start/End: Original strand, 26469084 - 26469164
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||| |||||||||||||||| |||||||| ||| |||||  ||||||||||||||||||||| |||| ||||||    
T  26469084 tccttgtaaaaattttttgttttggaaaacccccctagaccaactgac--tgcatttttgctgatgtggcatgctgcgtcacc 26469164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 435
Target Start/End: Original strand, 3062262 - 3062337
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| |||||||||||   ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  3062262 gattcggtccttgtaaat--tttttgttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggca 3062337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 433
Target Start/End: Complemental strand, 26644747 - 26644603
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||||| || | |||| || |||||| |||||||||||||| |||| |||||||       || ||||| | || |||||||   |||||||||    
T  26644747 agggttaataggtcttttccccttgtaatataggtcacttttggttttcccc-tgtaaaaattttatgtaagatttcatctttgtaaattttttttgttt 26644649  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtgg 433  Q
    | ||| |||||||||||  ||||||| |||||||||||||||||||    
T  26644648 tagaataccccctaggcatgctgactgtgcatttttgctgatgtgg 26644603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 433
Target Start/End: Complemental strand, 26750713 - 26750569
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||||| || | |||| || |||||| |||||||||||||| |||| |||||||       || ||||| | || |||||||   |||||||||    
T  26750713 agggttaataggtcttttccccttgtaatataggtcacttttggttttcccc-tgtaaaaattttatgtaagatttcatctttgtaaattttttttgttt 26750615  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtgg 433  Q
    | ||| |||||||||||  ||||||| |||||||||||||||||||    
T  26750614 tagaataccccctaggcatgctgactgtgcatttttgctgatgtgg 26750569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 23270196 - 23270126
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctga 428  Q
    ||||| ||||||||||||||  |||||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  23270196 gattcggtccttgtaaaaaaaatttgttttcgaaaacccccctagaccagctgactgtgcatttttgctga 23270126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 447
Target Start/End: Original strand, 28189506 - 28189573
Alignment:
Q  380 ttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||  ||| || ||||||||||  ||| | |||||||||||||||||||||||||||||||||    
T  28189506 ttttgtttctgaatacaccctaggccatatgaatctgcatttttgctgatgtggcacgctgagtcacc 28189573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 29942506 - 29942444
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaa 345  Q
    ||||||||||||||||| || ||||||||| |||||| |||| || |||||| ||||||||||    
T  29942506 atttaagggttaataggtctttaccccctgtaatataggtcatttctggttttccccctgtaa 29942444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 432
Target Start/End: Original strand, 32614262 - 32614316
Alignment:
Q  379 tttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtg 432  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  32614262 ttttttttttggaaaacccccctaggccagctgactgtgcatttttactgatgtg 32614316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 16129492 - 16129539
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||| | || ||||||||| |||||||||||||||||||||    
T  16129492 aagggttaataagtctttaccccctgtaatatatgtcacttttggttt 16129539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 20754539 - 20754488
Alignment:
Q  379 tttttgttttggaaaaccc-cctaggccagctgactatgcatttttgctgat 429  Q
    ||||||||||||||||||| ||||| |||||||||| | |||||||||||||    
T  20754539 tttttgttttggaaaacccacctagaccagctgactgtacatttttgctgat 20754488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 22366277 - 22366234
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttg 330  Q
    ||||||||||||| || |||||||||||||||| ||||||||||    
T  22366277 aagggttaataggtctttaccccctgcaatataggtcacttttg 22366234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 7017067 - 7017128
Alignment:
Q  286 taagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||||||||| |  || ||||||||| |||||| |||| |||| |||||||||||||||||    
T  7017067 taagggttaatggtgctttaccccctgtaatataggtcattttttgtttcccccctgtaaaa 7017128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 423
Target Start/End: Complemental strand, 16130517 - 16130384
Alignment:
Q  291 gttaataggcctctaccccctgcaatatatgtcacttttggtt-tcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttg 389  Q
    ||||||||| || |||||| |  ||||||  |||||||||||| |||| |||||||||       |||||||| | ||||||||||   |||| |||||     
T  16130517 gttaataggtctttaccccttataatatagatcacttttggttatccctcctgtaaaaagaatttgtcagatttcatccttgtaaatttttttcgtttta 16130418  T
Q  390 gaaaaccccctaggccagctgactatgcattttt 423  Q
    ||| |||||||||||  ||||||| |||||||||    
T  16130417 gaataccccctaggcatgctgactgtgcattttt 16130384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 279 - 441
Target Start/End: Original strand, 14819 - 14984
Alignment:
Q  279 atttatttaagggttaataggcctctaccccct-gcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaa 376  Q
    |||||||||| ||||||||||||| ||||| || |||||||| |||||||||||||| ||||||||| |||       || |||||||||||||||||||    
T  14819 atttatttaaaggttaataggcctttaccctcttgcaatataggtcacttttggttttcccccctgtgaaatttttttgttagattccgtccttgtaaaa 14918  T
Q  377 aatttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
      |||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  14919 tttttttgttttggaaaacccccctaggccagctgactgtgcattttcgctgatgtggcacgctga 14984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 449
Target Start/End: Complemental strand, 16130 - 15965
Alignment:
Q  287 aagggttaataggcctctaccccc-tgcaatatatgtcacttttggt-ttcccccctgtaaaannnnnnn-gtcagattccgtccttgtaaaaaattttt 383  Q
    |||||||| ||||||| ||||||| ||||||||| |||||||||||| ||||||| ||| |||        || |||||||||||||||||| | |||||    
T  16130 aagggttagtaggcctttacccccctgcaatataggtcacttttggtgttcccccttgtgaaattttttttgttagattccgtccttgtaaatatttttt 16031  T
Q  384 gttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  16030 gttttggaaaaccccctaggccaactgactgtgcattttcgctgatgtggcacgctgagtcaccat 15965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 285 - 441
Target Start/End: Original strand, 5699751 - 5699908
Alignment:
Q  285 ttaagggttaataggcctctaccccc-tgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    |||||||||||||||| | ||||||| ||||||||| |||||||||||||| ||| |||||||        |||||||  |||||||||||||  |||||    
T  5699751 ttaagggttaataggcttttacccccctgcaatataggtcacttttggttttccctctgtaaattttttttgtcagatctcgtccttgtaaaattttttt 5699850  T
Q  384 gttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5699851 gttttgaaaaaccccctaggccagctgactgtgcatttttgctgatgtggcacgctga 5699908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 285 - 449
Target Start/End: Complemental strand, 5700724 - 5700559
Alignment:
Q  285 ttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    ||||| |||||||| ||| |||||||||||||||| |||||||||| ||| ||||||||| |||       ||||||||||||||||||||    |||||    
T  5700724 ttaagagttaatagacctttaccccctgcaatataggtcacttttgattttcccccctgtgaaatttttttgtcagattccgtccttgtaattttttttt 5700625  T
Q  384 gttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    ||||||||||||||||||| ||||||||||  ||||||| ||| ||||||||| ||||||||||||    
T  5700624 gttttggaaaaccccctagaccagctgactgcgcattttcgcttatgtggcacactgagtcaccat 5700559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 23932510 - 23932353
Alignment:
Q  291 gttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttgg 390  Q
    ||||||||| || || ||||||||||||| ||||||||||||||  ||||| |||||       |||||||||||||||| ||||||| ||||||||||     
T  23932510 gttaataggtctttatcccctgcaatataggtcacttttggtttttcccctataaaatttttttgtcagattccgtccttataaaaaaattttgttttga 23932411  T
Q  391 aaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||| || || |||||||| |||||||| |||||||||||| |||||||||||    
T  23932410 aaaacccccttaagcaagctgactgtgcattttcgctgatgtggcatgctgagtcacc 23932353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 290 - 427
Target Start/End: Original strand, 28819537 - 28819676
Alignment:
Q  290 ggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtttt 388  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||  ||||||||||||        |  ||||| |||||||||||||| |||||||||    
T  28819537 ggttaataggcctttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaaatttggattcggtccttgtaaaaaaattttgtttt 28819636  T
Q  389 ggaaaa-ccccctaggccagctgactatgcatttttgctg 427  Q
    |||||| |||||||| |||||||||| |||||||||||||    
T  28819637 ggaaaacccccctagaccagctgactgtgcatttttgctg 28819676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 359 - 435
Target Start/End: Complemental strand, 28820541 - 28820465
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  28820541 gattcggtccttgtaaaaattttttgttttggaaaaccccctagaccagctgacggtgcatttttgctgatgtggca 28820465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 447
Target Start/End: Original strand, 11465891 - 11466049
Alignment:
Q  291 gttaataggcctctaccccctgcaatatatgtcacttttggtttcccccc-tgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttg 389  Q
    |||||||| | | ||||||||||||||||||||||||||||||| ||||| ||||||        || ||||| ||||||||||||   ||||| |||||    
T  11465891 gttaatagacttttaccccctgcaatatatgtcacttttggttttcccccatgtaaattttttttgttagatttcgtccttgtaaatt-tttttcttttg 11465989  T
Q  390 gaaaacccc--ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||| |||||  |||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  11465990 gaataccccacctaggccagctgactatgtattttcgctgatgtggcatgctgagtcacc 11466049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 435
Target Start/End: Complemental strand, 19601327 - 19601176
Alignment:
Q  286 taagggttaataggcctctaccccc-tgcaatatatgtcacttttggtttcccc-cctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    ||||||||||||||||| ||||||| || |||||| ||||||||||||||  |  |||||||||        |  ||||| ||||||||||||  |||||    
T  19601327 taagggttaataggcctttacccccctgtaatataggtcacttttggttttgcatcctgtaaaaaaaaaattttggattcggtccttgtaaaattttttt 19601228  T
Q  384 gttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  19601227 gttttggaaaaccccctagaccagctgactgtgcatttttgttgatgtggca 19601176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 435
Target Start/End: Complemental strand, 4602993 - 4602916
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccc-cctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  4602993 gattcggtccttgtaaaaaaattttgttttggaaaaccctcctaggctagctgactgtgcatttttgctgatgtggca 4602916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 287 - 435
Target Start/End: Complemental strand, 9751735 - 9751586
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgt 385  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||||||  |||||||||||         |  ||||| ||||||||||||  |||||||    
T  9751735 aagggttaataggcttttaccccctgtaatataggtcacttttggttttgccccctgtaaattttttttttt-gattcggtccttgtaaaatttttttgt 9751637  T
Q  386 tttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  9751636 tttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggca 9751586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 428
Target Start/End: Complemental strand, 34407935 - 34407809
Alignment:
Q  304 taccccctgcaatatatgtcacttttggtttcccccct-gtaaaannnnnnngtcagattccgtccttgtaaaaaattttt-gttttggaaaacccccta 401  Q
    ||||||||| |||||| |||||||||||||| |||| | ||||||       |||||||| |||||||||||||| ||||| ||||||||| ||||||||    
T  34407935 taccccctgtaatataagtcacttttggttttcccctttgtaaaaattttttgtcagatttcgtccttgtaaaaatttttttgttttggaatacccccta 34407836  T
Q  402 ggccagctgactatgcatttttgctga 428  Q
    |||||||||||| || ||||| |||||    
T  34407835 ggccagctgactgtgtattttcgctga 34407809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 447
Target Start/End: Complemental strand, 11466692 - 11466598
Alignment:
Q  355 gtcagattccgtccttgtaaa-aaatttttgttttggaaaaccc-cctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||||||||||    |||||||||||||| |||| |||||| ||||||||| |||||||| ||||||||||||| ||||||||||    
T  11466692 gtcagattccgtccttgtaaacttttttttgttttggaataccctcctaggtcagctgactgtgcattttcgctgatgtggcacactgagtcacc 11466598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 435
Target Start/End: Original strand, 35599312 - 35599461
Alignment:
Q  289 gggttaataggcctctaccccc-tgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||||| ||| ||||||| || |||||| ||||||||||||||  ||||||||||||        | |||||| ||||||||||    ||||||||    
T  35599312 gggttaatagacctttacccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaaatttagattcggtccttgtaatttttttttgtt 35599411  T
Q  387 ttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||| ||| |||||||||| ||||||||| |||||||||||    
T  35599412 ttggaaaacccccctagaccagctgactgtgcattttttctgatgtggca 35599461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 366 - 432
Target Start/End: Original strand, 4602247 - 4602314
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaaccc-cctaggccagctgactatgcatttttgctgatgtg 432  Q
    |||||||||||||  ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  4602247 tccttgtaaaaaaaatttgttttggaaaaccctcctaggccagttgactgtgcatttttgctgatgtg 4602314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 288 - 447
Target Start/End: Original strand, 15395543 - 15395702
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt-gtt 386  Q
    ||||||||||||  | ||||||||| || ||| ||||||||||||||||||| ||||||        |||||||| | || |||||||   ||||| |||    
T  15395543 agggttaataggtttttaccccctgtaaaataggtcacttttggtttccccc-tgtaaattatttttgtcagatttcatcattgtaaatttttttttgtt 15395641  T
Q  387 ttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    || ||| |||||||||||  ||||||| ||||||||||||||||||||| |||| ||||||    
T  15395642 ttagaataccccctaggcatgctgactgtgcatttttgctgatgtggcatgctgtgtcacc 15395702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 290 - 435
Target Start/End: Complemental strand, 35600595 - 35600447
Alignment:
Q  290 ggttaataggcctctaccccc-tgcaatatatgtcacttttggtttcccccct-gtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||||||| ||||||| || |||||| ||||||||||||||  ||||| ||||||        | |||||  ||||||||||||  |||||||||    
T  35600595 ggttaataggcctttacccccctgtaatataggtcacttttggttttgccccttgtaaaaaaaaatttttagatttggtccttgtaaaatttttttgttt 35600496  T
Q  388 tggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    || ||||||||| ||| |||||| ||| |||||||||||||||||||||    
T  35600495 tgaaaaacccccctagaccagctaactgtgcatttttgctgatgtggca 35600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 435
Target Start/End: Complemental strand, 32145919 - 32145841
Alignment:
Q  358 agattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||| |||||||||||||| |||||||||| ||||| | | ||| |||||||||| |||||||||||||||||||||    
T  32145919 agattcggtccttgtaaaaaaattttgttttgaaaaactctcatagaccagctgactgtgcatttttgctgatgtggca 32145841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 9750538 - 9750595
Alignment:
Q  379 tttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  9750538 tttttgttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggca 9750595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 435
Target Start/End: Complemental strand, 11890086 - 11890009
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| |||||||||||   ||||||||||||||||||| | ||||| |||||||| |||||||||||||||||||||    
T  11890086 gattcggtccttgtaaattttttttgttttggaaaaccctcataggcaagctgactgtgcatttttgctgatgtggca 11890009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 447
Target Start/End: Original strand, 32144954 - 32145022
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||||  || |||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||    
T  32144954 tttttgttttaaaataccccctagggcagctgactgtgcatttttgctgatgtggcatgctgtgtcacc 32145022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 435
Target Start/End: Original strand, 19600044 - 19600121
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| |||||||||||   |||||||||||||||| |||||||| ||||| |||| |||||||||||| ||||||||    
T  19600044 gattcggtccttgtaaattttttttgttttggaaaacccccctagaccagccgactgtgcatttttgctaatgtggca 19600121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 440
Target Start/End: Original strand, 29320196 - 29320265
Alignment:
Q  367 ccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctg 440  Q
    ||||||||||| |||||||||| ||||||||||||| |||    ||| ||||||||||||||||||||| ||||    
T  29320196 ccttgtaaaaattttttgttttcgaaaaccccctagacca----actctgcatttttgctgatgtggcatgctg 29320265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 29321270 - 29321202
Alignment:
Q  379 tttttgttttggaaaac-cccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    ||||||||||||||||| ||||||| |||||||| | ||||||| ||||||||||||| |||| |||||    
T  29321270 tttttgttttggaaaactcccctagaccagctgaatgtgcatttatgctgatgtggcatgctgcgtcac 29321202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 449
Target Start/End: Complemental strand, 12823703 - 12823610
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    ||||||||||||||||||||||||  ||  ||||| |||||||||||  |||||||| | | |||||| ||| ||||| || |||||||||||||    
T  12823703 gtcagattccgtccttgtaaaaaaaatta-ttttgaaaaaccccctaaaccagctgattgtacattttcgctaatgtgacatgctgagtcaccat 12823610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 19599965 - 19600016
Alignment:
Q  284 tttaagggttaataggcctcta-ccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  19599965 tttaagggttaataggcctttacccccctgtaatataggtcacttttggttt 19600016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 447
Target Start/End: Complemental strand, 13948563 - 13948475
Alignment:
Q  358 agattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||| |||||||||||   |||||||||| ||| |||||||| |||| || ||| || ||||| | ||| ||||||||||||||||||    
T  13948563 agattcggtccttgtaaatt-tttttgttttagaataccccctatgccaactcactgtgtattttcgttgaggtggcacgctgagtcacc 13948475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 26034843 - 26034904
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    ||||||||||||| || ||||| |||||||||| |||| |||||| ||| ||||||||||||    
T  26034843 aagggttaataggtctttaccctctgcaatataggtcatttttggtttttccccctgtaaaa 26034904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 15061881 - 15061821
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    |||||||||||| || ||||||||| |||||| | ||||||||| ||| ||||||||||||    
T  15061881 agggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaaa 15061821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 4e-36; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 282 - 449
Target Start/End: Original strand, 37402477 - 37402647
Alignment:
Q  282 tatttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaa-aaat 379  Q
    ||||| |||||||||| |||| |||||||||||||||| |||||||||||||| ||||||| | |||       |||||||||||||||||||||    |    
T  37402477 tattttagggttaataagcctttaccccctgcaatataggtcacttttggttttcccccctctgaaatttttttgtcagattccgtccttgtaaattttt 37402576  T
Q  380 ttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  37402577 ttttgttttggaaaacccccctaggtcagctgactgtgcattttcgctgatgtggcacgctgagtcaccat 37402647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 289 - 441
Target Start/End: Complemental strand, 37403517 - 37403362
Alignment:
Q  289 gggttaataggcctctacc-ccctgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||||||| | |||| |||||||||||| |||||||||||||| ||||||||| |||       ||||||||||||||||||||||  ||||||||    
T  37403517 gggttaataggcatttacctccctgcaatataggtcacttttggttttcccccctgtgaaatttttttgtcagattccgtccttgtaaaatttttttgtt 37403418  T
Q  387 ttggaaaac-cccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    ||||||||| |||||||||||||||||| ||||||||  |||||||||||||||||    
T  37403417 ttggaaaacccccctaggccagctgactgtgcattttcactgatgtggcacgctga 37403362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 289 - 447
Target Start/End: Original strand, 6819195 - 6819356
Alignment:
Q  289 gggttaataggcctctaccccc-tgcaatatatgtcacttttggttt-cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||        | | |||||||||||||||||  ||||||||    
T  6819195 gggttaataggcctttacccccctgcaatataggtcacttttggttttcccccctgtaaaattttttttttaaattccgtccttgtaaaatttttttgtt 6819294  T
Q  387 ttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||| ||||||||| ||| |||||||||| |||||||| |||||||||||||||||| |||||    
T  6819295 ttgaaaaacccccctagcccagctgactgtgcattttcgctgatgtggcacgctgaatcacc 6819356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 446
Target Start/End: Complemental strand, 6820142 - 6819980
Alignment:
Q  286 taagggttaataggcctctaccccc-tgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttg 384  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||| |||| | |||||||||         | ||||||||||||| |||||| ||||||    
T  6820142 taagggttaataggcctttacccccctgcaatataggtcacttttagttttctccctgtaaatttttttttttagattccgtccttttaaaaattttttg 6820043  T
Q  385 ttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    ||||| ||||||||| ||| |||||||||| |||||||| |||||||||||| ||||||||||    
T  6820042 ttttgaaaaacccccctagcccagctgactgtgcattttcgctgatgtggcatgctgagtcac 6819980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 441
Target Start/End: Original strand, 5873686 - 5873839
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||||| || || ||||||||||||| |||||||||||||| ||||||||||||       |||||||| |||||||||||    ||||| |||    
T  5873686 agggttaatagggctttaacccctgcaatataggtcacttttggttttccccctgtaaaaaatttt-gtcagatttcgtccttgtaatttttttttattt 5873784  T
Q  388 tggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    || |||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  5873785 tgaaaaatccccctaggccagctgactgtgcattttcgctgatgtggcacgctga 5873839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 447
Target Start/End: Original strand, 39513866 - 39514024
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    ||||||||||||| | ||||||||| |||||| ||||||||||||||  ||||||||||||        |  ||||| |||||||||||| |||||||||    
T  39513866 agggttaataggcatttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaa--ttggattcggtccttgtaaaatatttttgtt 39513963  T
Q  387 ttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||||||| |||| ||||||    
T  39513964 ttggaaaaccccctagaccagcttactgtacttttttgctgatgtggcatgctgcgtcacc 39514024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 288 - 441
Target Start/End: Complemental strand, 5874776 - 5874621
Alignment:
Q  288 agggttaataggcctctacccc-ctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    ||||||||||| ||| |||||| |||||||||| || |||||||||||||||||||||||        |||||||| |||||||||||||  | |||| |    
T  5874776 agggttaatagacctttaccccgctgcaatataggtgacttttggtttcccccctgtaaattatttttgtcagatttcgtccttgtaaaatttatttgct 5874677  T
Q  387 ttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    ||| ||||||||| |||| ||||||||| |||||||| | ||||||||||||||||    
T  5874676 ttgaaaaacccccctagggcagctgactgtgcattttcgttgatgtggcacgctga 5874621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 290 - 447
Target Start/End: Original strand, 34901503 - 34901662
Alignment:
Q  290 ggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtttt 388  Q
    ||||||||||| | ||||||||| |||||| ||||||||||||||  ||||||||||||        |  ||||| |||||||||||   ||||||||||    
T  34901503 ggttaataggcttttaccccctgtaatataggtcacttttggttttgccccctgtaaaaatatttttttggattcggtccttgtaaattttttttgtttt 34901602  T
Q  389 ggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  34901603 ggaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtcacc 34901662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 40702071 - 40701927
Alignment:
Q  285 ttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||| ||||  ||||||||||||        |  ||||| |||||||||||||| ||||    
T  40702071 ttaagggttaataggcctttaccccctgtaatataggtcacttttcgttttgccccctgtaaaaaaaaaaattg-gattcggtccttgtaaaaaaatttt 40701973  T
Q  384 gttttggaaaaccccctaggccagctgactatgcatttttgctgat 429  Q
    ||||||||||||||||||||| || | ||| |||||||||||||||    
T  40701972 gttttggaaaaccccctaggctagttaactgtgcatttttgctgat 40701927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 366 - 435
Target Start/End: Complemental strand, 2270268 - 2270199
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  2270268 tccttgtaaaatttttttgttttggaaaaccccctagaccagctgactgtgcatttttgctgatgtggca 2270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 35322455 - 35322379
Alignment:
Q  360 attccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||| |||||||||||||| |||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||    
T  35322455 attcggtccttgtaaaaaaattttgttttggaaaacccccatagaccagctgactgtgcttttttgctgatgtggca 35322379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 443
Target Start/End: Original strand, 35009126 - 35009189
Alignment:
Q  380 ttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagt 443  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  35009126 ttttgttttggaataccccctaggccagctgactgtgcattttcgctgatgtggcacgcagagt 35009189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 28223713 - 28223625
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    ||||||||| ||||||||  |||||||||||||| ||||| |||| ||||||||| |||||||| |||||||||||||||||| |||||||    
T  28223713 gattccgtcattgtaaaat-tttttgttttggaatacccc-taggtcagctgactgtgcattttcgctgatgtggcacgctgaatcaccat 28223625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 447
Target Start/End: Original strand, 34503314 - 34503381
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||| ||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  34503314 tttttgttttagaatacccccg-ggccagctgactatgcatttttgctgacgtggcacgctgagtcacc 34503381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 379 - 445
Target Start/End: Complemental strand, 39515085 - 39515018
Alignment:
Q  379 tttttgttttggaaaaccc-cctaggccagctgactatgcatttttgctgatgtggcacgctgagtca 445  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| |||| ||||    
T  39515085 tttttgttttggaaaaccctcctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtca 39515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 435
Target Start/End: Complemental strand, 34902723 - 34902646
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| ||||||||||||  |||||||||||| |||||||| ||| ||| |||||| |||||||||||||||||||||    
T  34902723 gattcggtccttgtaaaatttttttgttttggcaaacccccctagaccaactgactgtgcatttttgctgatgtggca 34902646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 27407463 - 27407519
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||||| |||||||| | |||||| |||||||||||||||||||||    
T  27407463 tttttgttttggaaaactccctaggctaactgactgtgcatttttgctgatgtggca 27407519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 435
Target Start/End: Original strand, 2269120 - 2269191
Alignment:
Q  365 gtccttgtaaaaaatttttgttttggaaaac-cccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||  ||||||||||||||||| |||||||  ||||||||| ||||||| |||||||||||||    
T  2269120 gtccttgtaaaatttttttgttttggaaaactcccctagatcagctgactgtgcatttatgctgatgtggca 2269191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 27408618 - 27408567
Alignment:
Q  379 tttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgat 429  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  27408618 tttttgttttggaaaagccccctaggccagctgactgtgcatttttgctgat 27408567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 435
Target Start/End: Complemental strand, 31986210 - 31986139
Alignment:
Q  365 gtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||||||||||||||||||||    
T  31986210 gtccttgtaatatttttttgttttggaaaacccccctagactagctgactgtgcatttttgctgatgtggca 31986139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 447
Target Start/End: Original strand, 28222785 - 28222878
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgtttt-ggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||| |||||||||||    |||||||||| |||| | ||||||||| |||||||| || | ||| ||||||||||||||||||||||||    
T  28222785 gtcagatttcgtccttgtaatttttttttgtttttggaataacccctaggctagctgactgtgtactttcgctgatgtggcacgctgagtcacc 28222878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 435
Target Start/End: Original strand, 31985084 - 31985161
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||  | |||||||| |||||||||| ||||||||||    
T  31985084 gattcggtccttgtaaaatgtttttgttttggaaaacccccctaaacaagctgactgtgcatttttgttgatgtggca 31985161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 29309554 - 29309624
Alignment:
Q  278 catttatttaagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    |||||||||||||||||||||| || ||||||||| |||||| |||| ||  || ||||||||||||||||    
T  29309554 catttatttaagggttaataggtctttaccccctgtaatataggtcatttccggttttcccccctgtaaaa 29309624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 35862794 - 35862748
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||||    
T  35862794 agggttaataggcctttaccccctgcaatatagatcacttttggttt 35862748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 28561435 - 28561491
Alignment:
Q  290 ggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaa 346  Q
    |||||||||  || ||||||||| |||||| | ||||||||||||||||||||||||    
T  28561435 ggttaatagagctttaccccctgtaatatagggcacttttggtttcccccctgtaaa 28561491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 28566933 - 28566989
Alignment:
Q  290 ggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaa 346  Q
    |||||||||  || ||||||||| |||||| | ||||||||||||||||||||||||    
T  28566933 ggttaatagagctttaccccctgtaatatagggcacttttggtttcccccctgtaaa 28566989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 35321283 - 35321343
Alignment:
Q  372 taaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtg 432  Q
    |||||||  ||||||||||||||||||||||  ||  |||||||| |||||||||||||||    
T  35321283 taaaaaagatttgttttggaaaaccccctagatcaattgactatgtatttttgctgatgtg 35321343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 39451596 - 39451652
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||| ||| |||||||||||  ||||||| |||||||||||| ||||||||    
T  39451596 tttttgttttagaataccccctaggcatgctgactgtgcatttttgcttatgtggca 39451652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 35010002 - 35009951
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttccccc 339  Q
    |||||||||| | || |||||||||||||||| ||||||| |||||||||||    
T  35010002 agggttaatatgtctttaccccctgcaatataggtcacttgtggtttccccc 35009951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 43400665 - 43400716
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||||| || ||||||||| ||||||||||| || ||||||    
T  43400665 atttaagggttaataggtctttaccccctgtaatatatgtcatttctggttt 43400716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 39515180 - 39515134
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||| ||| ||||| |||||| ||||||||||||||    
T  39515180 agggttaataggcctttactccctgtaatataggtcacttttggttt 39515134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 5160310 - 5160351
Alignment:
Q  306 ccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||||| |||||| |||| ||||||||||||||||||||||    
T  5160310 ccccctgtaatataggtcatttttggtttcccccctgtaaaa 5160351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 21692666 - 21692605
Alignment:
Q  285 ttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaa 346  Q
    |||||||||||| |  || ||||||||| |||||| |||| ||||||||| |||||||||||    
T  21692666 ttaagggttaatggtgctttaccccctgtaatataggtcatttttggttttccccctgtaaa 21692605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 3912539 - 3912479
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||||||||| | || ||||||||| |||||| |||| ||| ||||| ||||||||||||    
T  3912539 aagggttaataagtctttaccccctgtaatataggtcattttcggttttccccctgtaaaa 3912479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 27164724 - 27164656
Alignment:
Q  280 tttatttaagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    |||| |||| |||||||||| || ||||||||| |||||| | ||||||||| ||| ||||||||||||    
T  27164724 tttaattaaaggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaaa 27164656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 34985389 - 34985321
Alignment:
Q  279 atttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    |||| ||| |||||||||||| || ||||||||| |||||| |||| || |||||| | ||||||||||    
T  34985389 attttttttagggttaataggtctttaccccctgtaatataggtcatttctggttttcgccctgtaaaa 34985321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 290 - 447
Target Start/End: Original strand, 54353367 - 54353525
Alignment:
Q  290 ggttaataggcctctaccccc-tgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtttt 388  Q
    ||||||||||| | ||| ||| ||||||||| |||||||||||||| ||||| ||||||       ||||||||||||||||||||||||  ||||||||    
T  54353367 ggttaataggcttttactcccgtgcaatataggtcacttttggttttccccc-gtaaaaattttttgtcagattccgtccttgtaaaaaaaatttgtttt 54353465  T
Q  389 ggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||||| || |||||||||||||||| ||| ||||||||||||||||||||||||    
T  54353466 ggaaaacccccctaagccagctgactatgcactttcgctgatgtggcacgctgagtcacc 54353525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 289 - 435
Target Start/End: Complemental strand, 34027251 - 34027104
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||  ||||||||||||        |  ||||| ||||||||||||  |||||||||    
T  34027251 gggttaataggcctttaccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaacttttcgattcggtccttgtaaaatttttttgttt 34027152  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||    
T  34027151 tggaaaaccccctagaccagctgactgtgcatttttgctgatgtggca 34027104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 379 - 449
Target Start/End: Original strand, 47765343 - 47765414
Alignment:
Q  379 tttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  47765343 tttttgttttggaaaacccctctaggccagctgactgtgcattttcgctgatgtggcacgctgagtcaccat 47765414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 447
Target Start/End: Original strand, 550744 - 550833
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| ||||||||||||  ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  550744 gattcggtccttgtaaaatttttttgttttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggcatgctgcgtcacc 550833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 432
Target Start/End: Original strand, 44070154 - 44070227
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtg 432  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  44070154 gattcggtcctagtaaaaaaattttgttttggaaaaccccctagaccagctgactgtgcatttttgctgatgtg 44070227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 446
Target Start/End: Complemental strand, 47766221 - 47766068
Alignment:
Q  293 taataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttggaa 392  Q
    |||||||||| || | ||||||||||| ||||||||||||||  ||| ||||||        |||||||| |  | |||||||||| |||||||||||||    
T  47766221 taataggcctttatctcctgcaatataggtcacttttggtttttccc-tgtaaattttttttgtcagatttcaacattgtaaaaaaattttgttttggaa 47766123  T
Q  393 aacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    |||||| ||||||||||||||| || |||||  ||||||||||||||||||||||    
T  47766122 aacccctctaggccagctgactgtgtattttcactgatgtggcacgctgagtcac 47766068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 288 - 447
Target Start/End: Original strand, 41331768 - 41331930
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccc-cctgtaaaannnnnnngtcagattccgtccttgtaaaaaatt--tttg 384  Q
    |||||||||||| || || ||||||||||||| ||||||||||||||  || |||||||         |||||||||||||||||||     ||  ||||    
T  41331768 agggttaataggtctttatcccctgcaatataggtcacttttggtttttcctcctgtaatttttttttgtcagattccgtccttgtatttttttgttttg 41331867  T
Q  385 ttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||| ||||||||  ||||||||| |||||||| ||||||||||||||||||||||||    
T  41331868 ttttggaaacccccctagatcagctgactgtgcattttcgctgatgtggcacgctgagtcacc 41331930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 20613860 - 20613789
Alignment:
Q  378 atttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    ||||||||||||||||||||||||||| |||||||| || ||||| |||||||||||| | |||||||||||    
T  20613860 atttttgttttggaaaaccccctaggctagctgactgtgtattttcgctgatgtggcatgatgagtcaccat 20613789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 7515775 - 7515686
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaac-cccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||| | |||| | | ||||||||||||||||||||| |||| ||||||    
T  7515775 gattcggtccttgtaaaaactttttgttttggaaaacccccctagactagctaattgtgcatttttgctgatgtggcatgctgcgtcacc 7515686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 12352514 - 12352356
Alignment:
Q  291 gttaataggcctctaccccctgcaatatatgtcacttttggtttcccc-cctgtaaaannnnnnn-gtcagattccgtccttgtaaaaaatttttgtttt 388  Q
    |||||||||||| ||||||||| |||||| |||||||||||||| ||| ||| ||||         ||||| || ||||||||||||   ||||||||||    
T  12352514 gttaataggcctttaccccctgtaatataggtcacttttggttttccctcctataaatttttttttgtcagttttcgtccttgtaaatcttttttgtttt 12352415  T
Q  389 ggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
     ||| ||||||||||||| |||||| || ||||| |||||||||||| |||| ||||||    
T  12352414 agaataccccctaggccaactgactgtgaattttcgctgatgtggcatgctgcgtcacc 12352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 413
Target Start/End: Original strand, 24700307 - 24700416
Alignment:
Q  304 taccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctag 402  Q
    |||| ||||||||||| ||||||||||||||  ||||||||||||       |||||||||||||||||||||   |||||||||||||| |||||||||    
T  24700307 tacctcctgcaatataggtcacttttggttttaccccctgtaaaaaaaaattgtcagattccgtccttgtaaatt-tttttgttttggaataccccctag 24700405  T
Q  403 gccagctgact 413  Q
    | |||||||||    
T  24700406 gacagctgact 24700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 435
Target Start/End: Original strand, 48029489 - 48029558
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||   |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  48029489 tccttgtaaagtttttttgttttggaaaaccccctaggctagctgactgtgcatttttgctgatgaggca 48029558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 355 - 445
Target Start/End: Complemental strand, 41332728 - 41332638
Alignment:
Q  355 gtcagattccgtccttgtaa-aaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtca 445  Q
    ||||||||||||||||||||     |||||||||||||| | |||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  41332728 gtcagattccgtccttgtaattttttttttgttttggaata-cccctaggccagctgactgtgcattttcgctgatgtggcacactgagtca 41332638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 447
Target Start/End: Complemental strand, 2658148 - 2657987
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttccc--ccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    ||||||||||  || ||| ||||||||||||  ||||||||||||| ||  |||||||||        |||||||| |||||||||||    ||||||||    
T  2658148 gggttaatagagctttactccctgcaatataactcacttttggttttcctcccctgtaaattttttttgtcagatttcgtccttgtaatttttttttgtt 2658049  T
Q  387 ttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||| |||||| ||||||| |||||| || ||||| ||||||||| || |||||||||||    
T  2658048 ttggaatacccccataggccaactgactgtgtattttcgctgatgtgacatgctgagtcacc 2657987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 432
Target Start/End: Original strand, 34025913 - 34026059
Alignment:
Q  288 agggttaataggcctctaccccct-gcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttt-tgt 385  Q
    ||||||||||| ||| |||||||| | |||||| ||||||||||||||  |||||||||||        |  ||||| |||||||||||   |||| |||    
T  34025913 agggttaatagacctttacccccttgtaatataggtcacttttggttttgcccctgtaaaaaaaaaaaattggattcggtccttgtaaatttttttttgt 34026012  T
Q  386 tttggaaaaccccctaggccagctgactatgcatttttgctgatgtg 432  Q
    ||||||||||||||||| |||| ||||| || |||||||||||||||    
T  34026013 tttggaaaaccccctagaccagttgactgtgtatttttgctgatgtg 34026059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 435
Target Start/End: Complemental strand, 48030242 - 48030185
Alignment:
Q  379 tttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  48030242 tttttgttttggaaaatccccctaagccagctgactgtgcatttttgctgatgtggca 48030185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 20612969 - 20613025
Alignment:
Q  292 ttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||    
T  20612969 ttaataggcctttaccccctgcaatataggtcacttttggttttcccccctgtaaaa 20613025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 20613019 - 20613091
Alignment:
Q  370 tgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||||| ||||||||||| ||||||||| |||| ||||||||| |||||||| ||||||| ||||||||||    
T  20613019 tgtaaaaattttttgttttgaaaaacccccatagggcagctgactgtgcattttcgctgatgcggcacgctga 20613091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 368 - 435
Target Start/End: Complemental strand, 54054361 - 54054293
Alignment:
Q  368 cttgtaaaaaatttttgttttggaaaacc-ccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||   ||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  54054361 cttgtaaaaaaaaattgttttggaaaacctccctaggccagctgactgtgcatttttactgatgtggca 54054293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 24701258 - 24701207
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccc 340  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  24701258 gggttaataggcctttaccccctgcaatataggtcacttttggttttccccc 24701207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 435
Target Start/End: Original strand, 51162152 - 51162223
Alignment:
Q  365 gtccttgtaaaaaatttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||  |||||||||||||| |||||||| ||| |||||| |||||||||| ||||||||||    
T  51162152 gtccttgtaaaaaaaatttgttttggaaaacccccctagaccaactgactgtgcatttttgttgatgtggca 51162223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 441
Target Start/End: Original strand, 2657242 - 2657303
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||||||||||| ||||| ||| |||||||||| |||||||| ||||||||||||||||||    
T  2657242 tttttgttttggaatacccc-tagaccagctgactgtgcattttcgctgatgtggcacgctga 2657303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 447
Target Start/End: Complemental strand, 44071287 - 44071198
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| ||||||||||||||   |||||||||||||||||| ||  ||| |||||| ||||||||| ||||||||||| |||| ||||||    
T  44071287 gattcggtccttgtaaaaaaaaattgttttggaaaacccccctaaaccaactgactgtgcatttttactgatgtggcatgctgcgtcacc 44071198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 432
Target Start/End: Original strand, 937736 - 937800
Alignment:
Q  369 ttgtaaaaaatttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtg 432  Q
    ||||||||||   ||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  937736 ttgtaaaaaaaaattgttttggaaaaccccactaggccagctgactgtacatttttgctgatgtg 937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 3673324 - 3673272
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgt 431  Q
    |||||||||||||| ||| |||||||||||||||| |||||||| ||||||||    
T  3673324 tttttgttttggaatacctcctaggccagctgactgtgcattttcgctgatgt 3673272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 447
Target Start/End: Complemental strand, 43860876 - 43860809
Alignment:
Q  380 ttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||| ||| ||||| ||| ||| |||||| |||||||| |||||||||||| |||||||||||    
T  43860876 ttttgttttagaataccccatagaccacctgactgtgcattttcgctgatgtggcatgctgagtcacc 43860809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 54354248 - 54354190
Alignment:
Q  289 gggttaataggcctctaccccc-tgcaatatatgtcacttttgg-tttcccccctgtaa 345  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||||||    
T  54354248 gggttaataggcctttacccccctgcaatataggtcacttttggttttcccccctgtaa 54354190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 423
Target Start/End: Complemental strand, 4432954 - 4432909
Alignment:
Q  379 tttttgttttggaaaaccccc-taggccagctgactatgcattttt 423  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  4432954 tttttgttttggaaaacccccctaggcaagctgactatgcattttt 4432909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 432
Target Start/End: Complemental strand, 51163984 - 51163931
Alignment:
Q  380 ttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtg 432  Q
    |||||||||||||||||||| ||  |||||||||||||||||||| ||||||||    
T  51163984 ttttgttttggaaaacccccctaaaccagctgactatgcatttttactgatgtg 51163931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 434
Target Start/End: Original strand, 7514660 - 7514716
Alignment:
Q  379 tttttgttttggaaaaccccct-aggccagctgactatgcatttttgctgatgtggc 434  Q
    ||||||||||||||||| |||| || ||| |||||| ||||||||||||||||||||    
T  7514660 tttttgttttggaaaactcccttagaccaactgactgtgcatttttgctgatgtggc 7514716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 21780120 - 21780180
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||||||||||| || ||||||||| |||||| |||| ||| ||||| ||||||||||||    
T  21780120 aagggttaataggtctttaccccctgtaatataggtcattttcggttttccccctgtaaaa 21780180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 447
Target Start/End: Original strand, 3672581 - 3672632
Alignment:
Q  396 cccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||| ||  || ||||| ||||||||||||||||||||||||    
T  3672581 cccctaggccagctaacagtgtattttcgctgatgtggcacgctgagtcacc 3672632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 47765284 - 47765339
Alignment:
Q  291 gttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaa 346  Q
    |||||||||| | || ||||||||||||| |||||||||||||| ||| |||||||    
T  47765284 gttaataggcttttatcccctgcaatataggtcacttttggttttccctctgtaaa 47765339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 29248237 - 29248287
Alignment:
Q  284 tttaagggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    |||||||||||||||| || ||||||||| |||||| | ||||||||||||    
T  29248237 tttaagggttaataggtctttaccccctgtaatataggacacttttggttt 29248287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 447
Target Start/End: Complemental strand, 37265369 - 37265209
Alignment:
Q  284 tttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaa--ttt 381  Q
    ||||||| ||||||||| | ||||||  |||||||| |||||||||||||  |||| |||||||       ||||||||||||||||||||      |||    
T  37265369 tttaaggattaataggcttttacccc--gcaatataggtcacttttggtt--ccccttgtaaaaaaattt-gtcagattccgtccttgtaattttgtttt 37265275  T
Q  382 ttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    || ||||| || |||||||||| || |||| | |||||||| | |||||||||||||| |||||||    
T  37265274 ttattttgaaataccccctaggtcaactgattgtgcattttcgttgatgtggcacgctcagtcacc 37265209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 447
Target Start/End: Original strand, 43860627 - 43860669
Alignment:
Q  405 cagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||| |||||||| |||||||||||||||||| |||||    
T  43860627 cagctgactgtgcattttcgctgatgtggcacgctgattcacc 43860669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 20962192 - 20962253
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    ||||||||||||  || ||||||||| |||||||| ||||||||| ||| ||||||||||||    
T  20962192 aagggttaatagatctttaccccctgtaatatatggcacttttggttttgccccctgtaaaa 20962253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 50881481 - 50881420
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    ||||||||||||| || ||||||||| |||||| | ||||||||| ||| ||||||||||||    
T  50881481 aagggttaataggtctttaccccctgtaatataggccacttttggttttgccccctgtaaaa 50881420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 54053660 - 54053717
Alignment:
Q  379 tttttgttttggaaaaccccct-aggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||| |||| || || ||||||||||||| || ||||||||||||||||||    
T  54053660 tttttgttttgaaaaatcctcttaggccagctgactgtgtatttttgctgatgtggca 54053717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 27450138 - 27450094
Alignment:
Q  304 taccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||    
T  27450138 taccccctgtaatatatgtcatttttggttttcccccctgtaaaa 27450094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 432
Target Start/End: Complemental strand, 39865944 - 39865892
Alignment:
Q  380 ttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtg 432  Q
    ||||||||| ||| ||||| |||||  ||||||| ||||||||||||||||||    
T  39865944 ttttgttttagaataccccataggcatgctgactgtgcatttttgctgatgtg 39865892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 46360956 - 46360892
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    |||||||||||||| |  || ||||||||| |||||| |||| |||| |||| ||||||||||||    
T  46360956 atttaagggttaatggtgctttaccccctgtaatataggtcattttttgttttccccctgtaaaa 46360892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 447
Target Start/End: Complemental strand, 15809435 - 15809273
Alignment:
Q  286 taagggttaataggcctctaccccctgcaatatatgtcacttttggtttcc-cccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttg 384  Q
    |||| ||||||||| || || ||||||||||||| |||||||||||||| | ||||||||||        ||||||||||||||||||||    ||||||    
T  15809435 taagagttaataggtctttatcccctgcaatataggtcacttttggttttcacccctgtaaattttttttgtcagattccgtccttgtaattt-tttttg 15809337  T
Q  385 ttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||| |||| |||||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  15809336 ttttgaaaaaaccccctaggctagctgactgtgcatttttgctgatgtgacacgctgagtcacc 15809273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 443
Target Start/End: Original strand, 15808743 - 15808881
Alignment:
Q  306 ccccctgcaatatatgtcacttttggtttcccccc-tgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggc 404  Q
    |||||| ||||||| |||||||||||||| ||||| ||||||        |||||||||||||||||||||   |||||||||||||||||||| | ||     
T  15808743 ccccctacaatataggtcacttttggttttcccccatgtaaattttttttgtcagattccgtccttgtaaattttttttgttttggaaaaccccatggga 15808842  T
Q  405 cagctgactatgcatttttgctgatgtggcacgctgagt 443  Q
    ||||| ||| |||||||| ||||||||||||||||||||    
T  15808843 cagctaactgtgcattttcgctgatgtggcacgctgagt 15808881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 15747745 - 15747898
Alignment:
Q  283 atttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttccc-ccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattt 381  Q
    |||||||||||||||| ||| ||||||||| |||||| ||||||||||||||    ||||||||||        |   |||| ||||||||||||  |||    
T  15747745 atttaagggttaatagacctttaccccctgtaatataggtcacttttggttttgttccctgtaaaaacaaatttttcaattcggtccttgtaaaattttt 15747844  T
Q  382 ttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  15747845 ttgttttggaaaaccccctagactagctgactgtgcatttttgctgatgtggca 15747898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 447
Target Start/End: Complemental strand, 22468283 - 22468124
Alignment:
Q  288 agggttaataggcctctaccccc-tgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgt 385  Q
    ||||||||||||||| ||||||| || |||||| ||||||||||||||  ||||||||||||        |  ||||  ||||||||||||  |||||||    
T  22468283 agggttaataggcctttacccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaa--ttggattaggtccttgtaaaacttttttgt 22468186  T
Q  386 tttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||| ||||||    
T  22468185 tttggaaaaccccctagaccagcagactgtgcatttttgctgatgtggcatgctgcgtcacc 22468124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 447
Target Start/End: Complemental strand, 22474504 - 22474345
Alignment:
Q  288 agggttaataggcctctaccccc-tgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgt 385  Q
    ||||||||||||||| ||||||| || |||||| ||||||||||||||  ||||||||||||        |  ||||  ||||||||||||  |||||||    
T  22474504 agggttaataggcctttacccccctgtaatataggtcacttttggttttgccccctgtaaaaaaaaaa--ttggattaggtccttgtaaaacttttttgt 22474407  T
Q  386 tttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||| ||||||    
T  22474406 tttggaaaaccccctagaccagcagactgtgcatttttgctgatgtggcatgctgcgtcacc 22474345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 288 - 447
Target Start/End: Original strand, 33868474 - 33868634
Alignment:
Q  288 agggttaataggcctctaccc-cctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtt 386  Q
    |||||||||||| || || || |||| |||||| |||||||||  ||| ||||||||||||        ||||||| |||||||||||| | ||||||||    
T  33868474 agggttaataggtctttatcctcctgtaatataggtcacttttaattttccccctgtaaaatttttttatcagatttcgtccttgtaaatattttttgtt 33868573  T
Q  387 ttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||| ||||||||  |||||||||  || ||||| ||||||||||||||||||||||||    
T  33868574 ttggaataccccctaaaccagctgacagtgtattttcgctgatgtggcacgctgagtcacc 33868634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 447
Target Start/End: Complemental strand, 1873701 - 1873609
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||||| |||     |||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  1873701 gtcagattccgtccttctaattttatttttttttggaataccccctaggccagctgactgtgcattttcgctgatgtggcacgctgagtcacc 1873609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 435
Target Start/End: Complemental strand, 44242412 - 44242265
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||||||| |||| |||| ||||||  |||||||||||||  ||||||||||||        | ||||||  ||||||||||   |||||||||    
T  44242412 gggttaataggcctttacctcctgtaatatagatcacttttggttttgccccctgtaaaaaaaaacttt-agattcgatccttgtaaattttttttgttt 44242314  T
Q  388 tggaaaaccc-cctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  44242313 tggaaaaccctcctagaccagctgactatgcatttttgctgatgtggca 44242265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 447
Target Start/End: Original strand, 22467061 - 22467143
Alignment:
Q  366 tccttgtaaaaaatttttgttttggaaaaccccct-aggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||  |||||||||||||||||||| || |||||||||| ||||||||||||||||||||| |||| ||||||    
T  22467061 tccttgtaaaaaaaatttgttttggaaaacccccttagaccagctgactgtgcatttttgctgatgtggcatgctgtgtcacc 22467143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 447
Target Start/End: Original strand, 15481487 - 15481649
Alignment:
Q  287 aagggttaataggcctcta-ccccctgcaatatatgtcacttttggtttcccc-cctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttg 384  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||| ||  ||| |||         ||| |||| ||| |||||||  | ||||||    
T  15481487 aagggttaataggcctttatccccctgcaatataggtcacttttggttttccgtcctataatttttttttgtctgatttcgttcttgtaattattttttg 15481586  T
Q  385 ttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||| ||||| |||| ||||| ||| |||||||| ||||||||||||||||||||||||    
T  15481587 ttttggaataccccttaggtcagctaactgtgcattttcgctgatgtggcacgctgagtcacc 15481649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 18532886 - 18532818
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  18532886 tttttgttttggaataccccttaggccagctgactgtgcattttcgctgatgtggcacactgagtcacc 18532818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 441
Target Start/End: Original strand, 4024874 - 4025025
Alignment:
Q  292 ttaataggcctctacccc-ctgcaatatatgtcacttttggtttcc-cccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttttg 389  Q
    ||||||||||| |||||| |||||||||| |||| |||| |||| | ||||||||||        ||||||||||||||||||||    ||||| |||||    
T  4024874 ttaataggcctttacccctctgcaatataggtcattttttgttttctcccctgtaaattttttttgtcagattccgtccttgtaattttttttt-ttttg 4024972  T
Q  390 gaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
     ||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  4024973 aaaaacccccataggccagctgactgtgcattttcgctgatgtggcacgctga 4025025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 28141781 - 28141849
Alignment:
Q  379 tttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||| |||||    
T  28141781 tttttgttttggaaaacccccataggccagctgactgtgcatttttgctgatttggcatgctgcgtcac 28141849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 447
Target Start/End: Complemental strand, 16647922 - 16647764
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    ||||||||||||| | || ||||||||| |||||| ||||||| |||||||| |||||         |||||||||| || |||| |    ||||||| |    
T  16647922 agggttaataggcttttatcccctgcaacatatgtaacttttgatttccccc-tgtaatttttttttgtcagattccatcgttgtcatttttttttgtat 16647824  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |  || ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  16647823 taaaataccccataggccagctgactgtgcattttcgctgatgtggcacgctgagtcacc 16647764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 369 - 435
Target Start/End: Original strand, 28461145 - 28461211
Alignment:
Q  369 ttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||  |||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||    
T  28461145 ttgtaaaatttttttgttttggaaaaccccgtagaccacctgactgtgcatttttgctgatgtggca 28461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 447
Target Start/End: Complemental strand, 45323955 - 45323791
Alignment:
Q  284 tttaagggttaataggcctctaccccc-tgcaatatatgtcacttttggttt--cccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatt 380  Q
    ||||||||||||||||||| ||||||| || |||||| |||| |||| ||||  | || ||||||||       |||||||| |||||||||||||||      
T  45323955 tttaagggttaataggcctttacccccctgtaatatacgtcattttttgtttttctcctctgtaaaagttttttgtcagatttcgtccttgtaaaaaaaa 45323856  T
Q  381 tttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    || | ||| ||| |||| | || |||||||||| |||||||||||||| ||||||||||||||||||    
T  45323855 tt-gctttagaatacccacgag-ccagctgactgtgcatttttgctgacgtggcacgctgagtcacc 45323791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 447
Target Start/End: Complemental strand, 15749067 - 15748906
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgt 385  Q
    |||||||||||||| | || |||||| |||||||||||||||||| ||| |||||||| ||         |  ||||| |||||||||||   |||||||    
T  15749067 aagggttaataggcttttatcccctgtaatatatgtcacttttggttttgccccctgt-aatttttttttttggattcggtccttgtaaattttttttgt 15748969  T
Q  386 tttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    ||||||||| ||||||||  ||||||||| | |||||||||| ||||||||||||| ||||||    
T  15748968 tttggaaaacccccctagagcagctgactgtacatttttgctaatgtggcacgctgcgtcacc 15748906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 435
Target Start/End: Complemental strand, 11830067 - 11829992
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| |||||| |||||||  ||||||||||||| |||||||| |||| ||||| |||||||||||||||||||||    
T  11830067 gattcggtccttataaaaaaaatttgttttggaaa-ccccctagaccagttgactgtgcatttttgctgatgtggca 11829992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 435
Target Start/End: Original strand, 44241093 - 44241244
Alignment:
Q  285 ttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcc-cccctgtaaaannnnnnngtcagattccgtccttgtaaaaaattttt 383  Q
    ||||||||||||||| || ||| ||||| |||||| |||| |||||||||   |||||||||||        | |||||  |||||||||||||| ||||    
T  44241093 ttaagggttaataggactttactccctgtaatataggtcatttttggttttgtcccctgtaaaaaaaaaattttagatttggtccttgtaaaaaaatttt 44241192  T
Q  384 gttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||| |||||||  |||||||||| || | ||||||||||||||||    
T  44241193 gttttggaaaacccccctaaaccagctgactgtgta-ttttgctgatgtggca 44241244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 441
Target Start/End: Original strand, 18531958 - 18532044
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||||| |||||||||||    |||||||||||||  |||||||||||||||||||| || ||||| |||||| |||| ||||||    
T  18531958 gtcagatttcgtccttgtaatttttttttgttttggagtaccccctaggccagctgactgtgtattttcgctgatatggcccgctga 18532044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 435
Target Start/End: Complemental strand, 34404646 - 34404500
Alignment:
Q  290 ggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgtttt 388  Q
    ||||||||||| | ||||||||| |||||||||||||||||| ||||||| |||||||        |||| ||| | ||||||| |||| ||||||||||    
T  34404646 ggttaataggcttttaccccctgtaatatatgtcacttttggttttcccctctgtaaattttttttgtcatatttcatccttgt-aaaattttttgtttt 34404548  T
Q  389 ggaa-aaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
     ||| | |||||| |||  ||||||| |||||||||| ||||||||||    
T  34404547 agaataccccccttggcatgctgactgtgcatttttgatgatgtggca 34404500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 447
Target Start/End: Original strand, 16647147 - 16647216
Alignment:
Q  379 tttttgttttggaa-aaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcacc 447  Q
    |||||||||||||| ||||||| ||||||||||||| || ||||| ||| ||||||||||| ||||||||    
T  16647147 tttttgttttggaataacccccaaggccagctgactgtgtattttcgctaatgtggcacgcagagtcacc 16647216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 446
Target Start/End: Complemental strand, 28142853 - 28142788
Alignment:
Q  382 ttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    ||||||||||||||||| |||||||| |||||  ||||||||||||||||||||| |||| |||||    
T  28142853 ttgttttggaaaacccctctaggccaactgacagtgcatttttgctgatgtggcatgctgcgtcac 28142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 430
Target Start/End: Original strand, 22292310 - 22292361
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatg 430  Q
    |||||||||||||| |||||||||||||||||||| |||| ||| |||||||    
T  22292310 tttttgttttggaataccccctaggccagctgactgtgcactttcgctgatg 22292361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 422
Target Start/End: Complemental strand, 33869432 - 33869365
Alignment:
Q  355 gtcagattccgtccttgtaaaaaatttttgttttggaaaaccccctaggccagctgactatgcatttt 422  Q
    ||||||||||||||||||||| | ||||||||||| || | |||||||| ||| ||||| ||||||||    
T  33869432 gtcagattccgtccttgtaaatattttttgttttgaaataacccctaggtcagttgactgtgcatttt 33869365  T

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Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 17328394 - 17328324
Alignment:
Q  277 acatttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||| ||||||||||||||||| || ||||||||| | ||||||||| || |||||| |||||| |||||    
T  17328394 acattcatttaagggttaataggtctttaccccctgtattatatgtcatttctggttttccccctataaaa 17328324  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 38528504 - 38528550
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||    
T  38528504 agggttaataggcctttacctcctgcaatatatatcacttttggttt 38528550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 23834525 - 23834465
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    |||||||||| |  || ||||||||| ||||||||||| |||||| |||||||||||||||    
T  23834525 aagggttaatggtgctttaccccctgtaatatatgtcatttttggattcccccctgtaaaa 23834465  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 5558237 - 5558280
Alignment:
Q  304 taccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||    
T  5558237 taccccctgtaatataggtcatttttggtttcccccctgtaaaa 5558280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 28462556 - 28462505
Alignment:
Q  284 tttaagggttaataggcctcta-ccccctgcaatatatgtcacttttggttt 334  Q
    ||||||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  28462556 tttaagggttaataggcctttatccccctgtaatataggtcacttttggttt 28462505  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 38528572 - 38528623
Alignment:
Q  385 ttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||| |||||||||||||||  || |||||||||||||||||||||    
T  38528572 ttttggaaaatccccctaggccagctacctgtgcatttttgctgatgtggca 38528623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 22116154 - 22116212
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaa 346  Q
    |||||||||||| || ||||||||| |||||| |||| ||| ||||| |||||||||||    
T  22116154 agggttaataggtctttaccccctgtaatataggtcattttcggttttccccctgtaaa 22116212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 435
Target Start/End: Complemental strand, 28462451 - 28462401
Alignment:
Q  386 tttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||||||||| | |||| |||||||||| |||||||||||||||||||||    
T  28462451 tttggaaaacctcactagaccagctgactgtgcatttttgctgatgtggca 28462401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 16577414 - 16577353
Alignment:
Q  279 atttatttaagggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccc 340  Q
    |||||||| |||||||||||| || ||||||||| |||||| || | || ||||||||||||    
T  16577414 atttattttagggttaataggtctttaccccctgtaatataggttatttctggtttcccccc 16577353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 20474010 - 20473945
Alignment:
Q  381 tttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcac 446  Q
    |||||||||||| |||| |||||||||| || | || ||||| |||||||||||| | ||||||||    
T  20474010 tttgttttggaataccctctaggccagccgattgtgtattttcgctgatgtggcatgttgagtcac 20473945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 22294284 - 22294219
Alignment:
Q  380 ttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggcacgctgagtc 444  Q
    ||||||||||||| |||||| |||||||||||||| || ||||| |||||| |||||  |||||||    
T  22294284 ttttgttttggaatacccccctaggccagctgactgtgtattttcgctgatttggcatactgagtc 22294219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 30371384 - 30371444
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    |||||||||||| || ||| ||||| |||||| |||| |||||| ||||||||||||||||    
T  30371384 agggttaataggtctttactccctgtaatataggtcatttttggttttcccccctgtaaaa 30371444  T

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Target: scaffold0725 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 435
Target Start/End: Original strand, 3912 - 4062
Alignment:
Q  287 aagggttaataggcctctaccccctgcaatatatgtcacttttggtttc-ccccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgt 385  Q
    ||||||||||||| || ||||||||| ||| || | ||||||||||||  ||||||||||||        |  ||||| |||||||||||||| ||||||    
T  3912 aagggttaataggtctttaccccctgtaatgtaggacacttttggttttgccccctgtaaaaaatttttttttgattcggtccttgtaaaaaaattttgt 4011  T
Q  386 tttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  4012 tttggaaaacccccctagaccagctgactgtgcatttttgctgatgtggca 4062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 435
Target Start/End: Complemental strand, 4942 - 4865
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaaccc-cctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| ||||||||||||  ||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  4942 gattcggtccttgtaaaatttttttgttttggaaaacccacctagatcagctgactgtgcatttttgctgatgtggca 4865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1122 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1122
Description:

Target: scaffold1122; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 449
Target Start/End: Original strand, 292 - 452
Alignment:
Q  289 gggttaataggcctctaccccctgcaatatatgtcacttttggtttcc-cccctgtaaaannnnnnngtcagattccgtccttgtaaaaaatttttgttt 387  Q
    |||||||||||  | |||| ||||||||||| || | |||| |||| | |||||||||||       ||||||||||||| ||||||||||  ||  |||    
T  292 gggttaataggtttttacctcctgcaatataggttattttttgttttctcccctgtaaaaattttttgtcagattccgtcattgtaaaaaaaatta-ttt 390  T
Q  388 tggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtcaccat 449  Q
    || |||||||||||| |||||||| | |||||||| ||| ||||||||||||||||||||||    
T  391 tgaaaaaccccctagaccagctgattgtgcattttcgcttatgtggcacgctgagtcaccat 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 358 - 435
Target Start/End: Complemental strand, 111529 - 111453
Alignment:
Q  358 agattccgtccttgtaaaaaatttttgttttggaaaacccc-ctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||| ||||||| |||| ||||||||||  ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  111529 agattcggtccttgcaaaatatttttgttt--gaaaacccctctagaccagctgactatgcatttttgctgatgtggca 111453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 110407 - 110455
Alignment:
Q  287 aagggttaataggcctcta-ccccctgcaatatatgtcacttttggttt 334  Q
    |||||||||||||| | || ||||||| |||||||||||||||||||||    
T  110407 aagggttaataggcatttatccccctgtaatatatgtcacttttggttt 110455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 36730 - 36647
Alignment:
Q  359 gattccgtccttgtaaa-aaatttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggcacgctg 440  Q
    |||||||||||||||||    |||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||| ||||    
T  36730 gattccgtccttgtaaatttttttttgttttggaaaacccccctaggccagttgactgtacatttttgctgatgtggcatgctg 36647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 441
Target Start/End: Original strand, 35689 - 35751
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||||||||||||||||| || ||||||||||  |||||||||| |||||||||| |||||    
T  35689 tttttgttttggaaaaccccatatgccagctgacagtgcatttttgttgatgtggcatgctga 35751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 35598 - 35658
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttgg-tttcccccctgtaaaa 347  Q
    |||||||||||| || ||||||||  |||||| ||||||||||| ||| ||||||||||||    
T  35598 agggttaataggtctttaccccctaaaatataggtcacttttggttttgccccctgtaaaa 35658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 435
Target Start/End: Complemental strand, 228568 - 228497
Alignment:
Q  365 gtccttgtaaaaaatttttgttttggaaaaccccc-taggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||| |  ||||||||||||||||||||| ||| | |||||||| |||||||||||||||||||||    
T  228568 gtccttgtaatatttttttgttttggaaaacccccctagactagctgactgtgcatttttgctgatgtggca 228497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 435
Target Start/End: Original strand, 227442 - 227519
Alignment:
Q  359 gattccgtccttgtaaaaaatttttgttttggaaaa-ccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||  | |||||||| |||||||||| ||||||||||    
T  227442 gattcggtccttgtaaaatgtttttgttttggaaaacccccctaaacaagctgactgtgcatttttgttgatgtggca 227519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 7858 - 7917
Alignment:
Q  288 agggttaataggcctctaccccctgcaatatatgtcacttttggtttcccccctgtaaaa 347  Q
    |||||||||||| || ||||||||| ||||||||||| || |||||| ||||||||||||    
T  7858 agggttaataggtctttaccccctgtaatatatgtcatttctggttttccccctgtaaaa 7917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 42907 - 42842
Alignment:
Q  380 ttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctgagtca 445  Q
    ||||||||| ||| ||||||||||||||| |||| |||||||||| ||||||| || |||| ||||    
T  42907 ttttgttttagaataccccctaggccagccgactgtgcatttttgttgatgtgacatgctgggtca 42842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 10446 - 10502
Alignment:
Q  379 tttttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggca 435  Q
    |||||||||| ||| |||||||||||  ||||||| |||||||||||| ||||||||    
T  10446 tttttgttttagaataccccctaggcatgctgactgtgcatttttgcttatgtggca 10502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 441
Target Start/End: Original strand, 9842 - 9901
Alignment:
Q  382 ttgttttggaaaaccccctaggccagctgactatgcatttttgctgatgtggcacgctga 441  Q
    |||||||| || | ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  9842 ttgttttgaaatatcccctaggccatctcactgtgcatttttgctaatgtggcacgctga 9901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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