View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1367_low_13 (Length: 285)
Name: NF1367_low_13
Description: NF1367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1367_low_13 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 30 - 285
Target Start/End: Original strand, 48258251 - 48258506
Alignment:
| Q |
30 |
gacttgggttcagaaacataaggagcttcattgaagcattcttggctaagcaattttggaggcttcacactgagcctattactatgcttgctaaatgact |
129 |
Q |
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| T |
48258251 |
gacttgggttcagaaacataaggagcttcattgaagcattcttggctaagcaattttggaggcttcacactgagcctattactatgcttgctaaatgact |
48258350 |
T |
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| Q |
130 |
caaggtaatatactttccccatgttgataatgggtttaaagtcttaacccaaaacttggaataaaaccttgattgacactatttttcatagtaatgagag |
229 |
Q |
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| T |
48258351 |
caaggtaatatactttccccatgttgataatgggtttaaagtcttaacccaaaacttggaataaaaccttgtttgacactatttttcatagtaatgagag |
48258450 |
T |
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| Q |
230 |
cagtcaaatcaagcaacgttctctaatcctagagcaaattgaagataagtttatgt |
285 |
Q |
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| T |
48258451 |
cagtcaaatcaagcaacgttctctaatccaagagcaaattgaagataagtttatgt |
48258506 |
T |
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