View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1367_low_17 (Length: 251)
Name: NF1367_low_17
Description: NF1367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1367_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 34370514 - 34370267
Alignment:
| Q |
1 |
agttgatgtaactcattgtaataatcctccaaactccaagcataacccgacatacatcgggataagacattggaaatttttataagtttctaattccttt |
100 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34370514 |
agttgatgtaactcattgtaataatccttcaaactccaagcataacccgacatacatcgggataagacattggaaatttttataagtttctaattccttt |
34370415 |
T |
|
| Q |
101 |
tcactctgtttaaaatactcgaaaacaaagaaaatat---ttactcatacatattattttttatcttccctagaaaacattatccaaaacaatgtgaggg |
197 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34370414 |
tcactctgtttaaaatactcgaaaacaaagaaaatatttattactcatacatattattttttatcttccctagaaaacattatccaaaacaatgtgaggg |
34370315 |
T |
|
| Q |
198 |
attcccctctcttttcattcctcccttttctccaatgtcctatgctac |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
34370314 |
attcccctctcttttcattcctcccttttctccaatgtcctctgctac |
34370267 |
T |
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