View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13682_low_3 (Length: 441)
Name: NF13682_low_3
Description: NF13682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13682_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 21 - 320
Target Start/End: Complemental strand, 47330978 - 47330680
Alignment:
| Q |
21 |
gtaacatgcatgaatggggtgtttggggttcgaactttgtccttacatataacaatgtaatatccttgccgactgagctatgctcatgaacgaannnnnn |
120 |
Q |
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| T |
47330978 |
gtaacatgcatgaatggggtgtttgaggtttaaactttgtccttacatataacaatgtaatatccttgccgactgagctatgctcatggacgaatttttt |
47330879 |
T |
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| Q |
121 |
natgtcatcatagttgaaaaagacgtttgtaatatataaaactaattgaactacccatcaaaaaataaactaattgaaccattgttttttgaatgaaact |
220 |
Q |
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| T |
47330878 |
tatgtcatcatagttgaaaaagacgtttgtaatatataaaactaattgaactacccatcaaaaaataaactaattgaaccattgttttttgaatgaaact |
47330779 |
T |
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| Q |
221 |
aattgttgaaaaaacttgtggtaaacagataaatggtgaatagatttttaaacttttggaactaattaaatcatttgttaaggtaatcgaaattagtggc |
320 |
Q |
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|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
47330778 |
aattgttg-agaaacttgtggtaaacagataaatggtgaatagatttttaaacttttggaactaattaaaccatttgttaaggtaatcgaaattagtggc |
47330680 |
T |
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