View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13682_low_7 (Length: 213)
Name: NF13682_low_7
Description: NF13682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13682_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 21 - 195
Target Start/End: Complemental strand, 16087442 - 16087268
Alignment:
| Q |
21 |
tcaacttcaaactacaataactgtcttcattgctaacattacccttcagcctaatagcttgcatctaaatgattcagttatttaacgagtccaatactgt |
120 |
Q |
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| T |
16087442 |
tcaacttcaaactacaataactgtcttcattgctaacattacccttcagcctaatagcttgcatctaaatgattcagttatttaacgagtccaatactgt |
16087343 |
T |
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| Q |
121 |
cttgcagcctccaaacagaaatgaaagaaatcattcagccacttcacaattccaaaaagcaacgacgtactcatt |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16087342 |
cttgcagcctccaaacagaaatgaaagaaatcattcagccacttcacaattccaaaaagcaacgacgtactcatt |
16087268 |
T |
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