View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13683_high_7 (Length: 455)

Name: NF13683_high_7
Description: NF13683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13683_high_7
NF13683_high_7
[»] chr6 (33 HSPs)
chr6 (313-455)||(3678902-3679044)
chr6 (19-56)||(7017068-7017105)
chr6 (19-56)||(25562152-25562189)
chr6 (19-56)||(26101666-26101703)
chr6 (19-51)||(31826213-31826245)
chr6 (19-51)||(33225440-33225472)
chr6 (21-56)||(7017320-7017355)
chr6 (21-56)||(7313451-7313486)
chr6 (21-56)||(27967466-27967501)
chr6 (21-56)||(33352637-33352672)
chr6 (278-312)||(19417946-19417980)
chr6 (22-56)||(19417947-19417981)
chr6 (19-56)||(1309784-1309821)
chr6 (278-311)||(7017071-7017104)
chr6 (278-311)||(7017321-7017354)
chr6 (278-311)||(7313452-7313485)
chr6 (19-56)||(13420187-13420224)
chr6 (278-311)||(18788916-18788949)
chr6 (19-56)||(19376212-19376249)
chr6 (19-56)||(22362959-22362996)
chr6 (278-311)||(25562155-25562188)
chr6 (278-311)||(25567703-25567736)
chr6 (278-311)||(26101669-26101702)
chr6 (278-311)||(27967467-27967500)
chr6 (19-56)||(29239723-29239760)
chr6 (278-311)||(29239724-29239757)
chr6 (278-311)||(33352638-33352671)
chr6 (279-311)||(13420447-13420479)
chr6 (20-56)||(14985330-14985366)
chr6 (20-56)||(24602429-24602465)
chr6 (279-311)||(31826216-31826248)
chr6 (279-311)||(33225443-33225475)
chr6 (16-56)||(33936447-33936487)
[»] chr4 (52 HSPs)
chr4 (278-318)||(20514910-20514950)
chr4 (19-56)||(1952733-1952770)
chr4 (19-56)||(26144156-26144193)
chr4 (19-56)||(35370410-35370447)
chr4 (19-56)||(36405875-36405912)
chr4 (19-56)||(46360915-46360952)
chr4 (19-56)||(47858451-47858488)
chr4 (19-56)||(54097098-54097135)
chr4 (20-56)||(3475485-3475521)
chr4 (20-56)||(12878674-12878710)
chr4 (20-56)||(13033148-13033184)
chr4 (20-56)||(33294940-33294976)
chr4 (20-56)||(34318658-34318694)
chr4 (19-51)||(35904614-35904646)
chr4 (20-56)||(36405658-36405694)
chr4 (20-51)||(12144544-12144575)
chr4 (20-51)||(42861380-42861411)
chr4 (21-51)||(4431292-4431322)
chr4 (22-56)||(20514909-20514943)
chr4 (21-51)||(26144374-26144404)
chr4 (278-311)||(1952736-1952769)
chr4 (278-311)||(3475487-3475520)
chr4 (19-56)||(7086088-7086125)
chr4 (278-311)||(12144546-12144579)
chr4 (278-311)||(12878676-12878709)
chr4 (278-311)||(13033149-13033182)
chr4 (278-311)||(26144159-26144192)
chr4 (19-56)||(30966610-30966647)
chr4 (19-56)||(31857229-31857266)
chr4 (278-311)||(33294942-33294975)
chr4 (278-311)||(35370411-35370444)
chr4 (278-311)||(36405660-36405693)
chr4 (278-311)||(36405876-36405909)
chr4 (278-311)||(46360916-46360949)
chr4 (278-311)||(47858452-47858485)
chr4 (19-56)||(52439337-52439374)
chr4 (278-311)||(54097101-54097134)
chr4 (20-56)||(3475716-3475752)
chr4 (279-311)||(4431293-4431325)
chr4 (15-51)||(5496569-5496605)
chr4 (20-56)||(6439184-6439220)
chr4 (20-56)||(6439443-6439479)
chr4 (19-47)||(8590829-8590857)
chr4 (20-56)||(13032886-13032922)
chr4 (20-56)||(15782261-15782297)
chr4 (19-51)||(27449861-27449893)
chr4 (20-56)||(27450118-27450154)
chr4 (20-56)||(28292052-28292088)
chr4 (19-51)||(32595893-32595925)
chr4 (20-56)||(35804088-35804124)
chr4 (20-56)||(35904874-35904910)
chr4 (19-51)||(36680210-36680242)
[»] chr7 (27 HSPs)
chr7 (17-56)||(18655372-18655411)
chr7 (17-56)||(31417524-31417563)
chr7 (19-56)||(28000140-28000177)
chr7 (19-56)||(44412554-44412591)
chr7 (20-56)||(43596534-43596570)
chr7 (20-56)||(45639746-45639782)
chr7 (21-56)||(5031922-5031957)
chr7 (20-51)||(21852764-21852795)
chr7 (21-51)||(1263785-1263815)
chr7 (281-311)||(29017834-29017864)
chr7 (17-51)||(31533920-31533954)
chr7 (19-56)||(13592733-13592770)
chr7 (23-56)||(15108090-15108123)
chr7 (278-311)||(18655377-18655410)
chr7 (19-56)||(19336041-19336078)
chr7 (278-311)||(27880874-27880907)
chr7 (278-311)||(28000141-28000174)
chr7 (19-56)||(30335404-30335441)
chr7 (278-311)||(31417525-31417558)
chr7 (278-311)||(43596535-43596568)
chr7 (278-311)||(44412555-44412588)
chr7 (278-311)||(45639747-45639780)
chr7 (19-47)||(2456432-2456460)
chr7 (20-56)||(10659731-10659767)
chr7 (278-310)||(15108090-15108122)
chr7 (20-56)||(21852992-21853028)
chr7 (278-314)||(35097587-35097623)
[»] scaffold0192 (2 HSPs)
scaffold0192 (19-56)||(14469-14506)
scaffold0192 (278-311)||(14470-14503)
[»] chr8 (30 HSPs)
chr8 (19-56)||(21692627-21692664)
chr8 (278-311)||(23565895-23565928)
chr8 (19-56)||(41708826-41708863)
chr8 (19-56)||(43383012-43383049)
chr8 (20-56)||(22686742-22686778)
chr8 (20-56)||(23564101-23564137)
chr8 (20-56)||(45530501-45530537)
chr8 (21-56)||(3785525-3785560)
chr8 (21-56)||(18367026-18367061)
chr8 (21-56)||(19158189-19158224)
chr8 (278-316)||(3785521-3785559)
chr8 (278-311)||(18367027-18367060)
chr8 (19-56)||(19157928-19157965)
chr8 (278-311)||(19158190-19158223)
chr8 (278-311)||(21692628-21692661)
chr8 (278-311)||(22686744-22686777)
chr8 (278-311)||(23564103-23564136)
chr8 (19-56)||(23565892-23565929)
chr8 (278-311)||(33317859-33317892)
chr8 (19-56)||(38687348-38687385)
chr8 (278-311)||(41708829-41708862)
chr8 (278-311)||(43383013-43383046)
chr8 (278-311)||(45530503-45530536)
chr8 (20-56)||(11961125-11961161)
chr8 (24-56)||(15152311-15152343)
chr8 (19-51)||(23428964-23428996)
chr8 (20-56)||(30222109-30222145)
chr8 (20-56)||(31343624-31343660)
chr8 (20-56)||(38132083-38132119)
chr8 (19-51)||(39301879-39301911)
[»] chr5 (23 HSPs)
chr5 (19-56)||(2724482-2724519)
chr5 (19-51)||(35936536-35936568)
chr5 (21-56)||(4633954-4633989)
chr5 (20-51)||(5661901-5661932)
chr5 (21-56)||(9672897-9672932)
chr5 (21-56)||(10598319-10598354)
chr5 (21-56)||(13012435-13012470)
chr5 (21-56)||(13083845-13083880)
chr5 (21-56)||(36518881-36518916)
chr5 (22-56)||(37631599-37631633)
chr5 (278-311)||(2724485-2724518)
chr5 (278-311)||(4633955-4633988)
chr5 (278-311)||(9672898-9672931)
chr5 (278-311)||(10598320-10598353)
chr5 (278-311)||(13012436-13012469)
chr5 (278-311)||(13083846-13083879)
chr5 (19-56)||(18254390-18254427)
chr5 (19-56)||(27433518-27433555)
chr5 (278-311)||(36518882-36518915)
chr5 (19-47)||(12496767-12496795)
chr5 (19-51)||(16920683-16920715)
chr5 (278-314)||(26785780-26785816)
chr5 (20-56)||(28593546-28593582)
[»] chr3 (49 HSPs)
chr3 (19-56)||(17261023-17261060)
chr3 (19-56)||(29853405-29853442)
chr3 (19-56)||(35434094-35434131)
chr3 (19-56)||(41301300-41301337)
chr3 (19-56)||(54012610-54012647)
chr3 (19-56)||(55090265-55090302)
chr3 (20-56)||(1351489-1351525)
chr3 (19-51)||(9559033-9559065)
chr3 (20-56)||(11761081-11761117)
chr3 (19-51)||(16876140-16876172)
chr3 (20-56)||(35359471-35359507)
chr3 (20-56)||(39846602-39846638)
chr3 (20-56)||(48418653-48418689)
chr3 (21-56)||(19598930-19598965)
chr3 (280-311)||(21549751-21549782)
chr3 (20-51)||(29853654-29853685)
chr3 (21-56)||(33898073-33898108)
chr3 (20-51)||(33898299-33898330)
chr3 (21-56)||(40066706-40066741)
chr3 (20-51)||(46994118-46994149)
chr3 (21-51)||(51688011-51688041)
chr3 (278-311)||(1351490-1351523)
chr3 (19-56)||(4548544-4548581)
chr3 (278-311)||(11761083-11761116)
chr3 (278-311)||(17261026-17261059)
chr3 (19-56)||(19301177-19301214)
chr3 (19-56)||(25024537-25024574)
chr3 (278-311)||(29853650-29853683)
chr3 (19-56)||(31341224-31341261)
chr3 (278-311)||(33898074-33898107)
chr3 (278-311)||(35359473-35359506)
chr3 (278-311)||(35434095-35434128)
chr3 (278-311)||(39846603-39846636)
chr3 (278-311)||(40066707-40066740)
chr3 (19-56)||(44512277-44512314)
chr3 (177-214)||(45333921-45333958)
chr3 (278-311)||(48418655-48418688)
chr3 (18-51)||(48489004-48489037)
chr3 (19-56)||(53667678-53667715)
chr3 (278-311)||(54012611-54012644)
chr3 (278-311)||(55090266-55090299)
chr3 (20-56)||(3820493-3820529)
chr3 (278-314)||(8487940-8487976)
chr3 (20-56)||(21550003-21550039)
chr3 (20-56)||(30451553-30451589)
chr3 (20-56)||(31341463-31341499)
chr3 (279-311)||(33898296-33898328)
chr3 (279-311)||(46994115-46994147)
chr3 (20-56)||(54087752-54087788)
[»] chr2 (54 HSPs)
chr2 (19-56)||(7327766-7327803)
chr2 (278-311)||(8898300-8898333)
chr2 (19-56)||(23834488-23834525)
chr2 (19-56)||(28739406-28739443)
chr2 (19-56)||(32845455-32845492)
chr2 (15-56)||(43766503-43766544)
chr2 (20-56)||(8214581-8214617)
chr2 (20-56)||(13691997-13692033)
chr2 (20-56)||(14793477-14793513)
chr2 (20-56)||(24952077-24952113)
chr2 (20-56)||(32845684-32845720)
chr2 (20-56)||(36944252-36944288)
chr2 (21-56)||(17920250-17920285)
chr2 (21-56)||(29640763-29640798)
chr2 (20-51)||(33441504-33441535)
chr2 (21-56)||(38358513-38358548)
chr2 (21-51)||(44610927-44610957)
chr2 (19-56)||(758767-758804)
chr2 (22-51)||(1366795-1366824)
chr2 (278-311)||(7327769-7327802)
chr2 (278-311)||(8214582-8214615)
chr2 (278-311)||(14793478-14793511)
chr2 (278-311)||(17920251-17920284)
chr2 (278-311)||(18544029-18544062)
chr2 (19-56)||(22552503-22552540)
chr2 (278-311)||(24952078-24952111)
chr2 (278-311)||(28739409-28739442)
chr2 (278-311)||(29640764-29640797)
chr2 (18-51)||(32649851-32649884)
chr2 (278-311)||(32845458-32845491)
chr2 (278-311)||(32845685-32845718)
chr2 (19-56)||(34181827-34181864)
chr2 (177-214)||(35337056-35337093)
chr2 (278-311)||(36944253-36944286)
chr2 (278-311)||(38358514-38358547)
chr2 (23-56)||(40385245-40385278)
chr2 (15-56)||(41101032-41101073)
chr2 (278-311)||(43766504-43766537)
chr2 (19-56)||(45632541-45632578)
chr2 (20-56)||(1060842-1060878)
chr2 (23-51)||(5856296-5856324)
chr2 (20-56)||(8214342-8214378)
chr2 (20-56)||(8898298-8898334)
chr2 (20-56)||(14793251-14793287)
chr2 (19-51)||(16361161-16361193)
chr2 (19-51)||(19686206-19686238)
chr2 (20-56)||(24951903-24951939)
chr2 (279-311)||(33441506-33441538)
chr2 (20-56)||(35916382-35916418)
chr2 (20-56)||(39341265-39341301)
chr2 (20-56)||(39341377-39341413)
chr2 (278-310)||(40385245-40385277)
chr2 (20-56)||(41611582-41611618)
chr2 (279-311)||(44610928-44610960)
[»] chr1 (40 HSPs)
chr1 (19-56)||(13295833-13295870)
chr1 (19-56)||(24004083-24004120)
chr1 (19-56)||(26486791-26486828)
chr1 (15-56)||(39160428-39160469)
chr1 (278-311)||(46583827-46583860)
chr1 (19-56)||(52413119-52413156)
chr1 (20-56)||(13296038-13296074)
chr1 (20-56)||(16555324-16555360)
chr1 (21-56)||(7454889-7454924)
chr1 (21-56)||(35384478-35384513)
chr1 (21-56)||(37847793-37847828)
chr1 (21-56)||(39160554-39160589)
chr1 (20-51)||(39657272-39657303)
chr1 (18-56)||(24004772-24004810)
chr1 (21-51)||(27142831-27142861)
chr1 (281-311)||(34945653-34945683)
chr1 (278-311)||(7454890-7454923)
chr1 (19-48)||(13693555-13693584)
chr1 (278-311)||(16555326-16555359)
chr1 (19-56)||(17724288-17724325)
chr1 (278-311)||(26486792-26486825)
chr1 (278-311)||(34945884-34945917)
chr1 (278-311)||(35384479-35384512)
chr1 (278-311)||(37847794-37847827)
chr1 (278-311)||(39160555-39160588)
chr1 (177-214)||(43412979-43413016)
chr1 (19-56)||(50880078-50880115)
chr1 (278-311)||(52413122-52413155)
chr1 (19-47)||(4352120-4352148)
chr1 (20-56)||(10176436-10176472)
chr1 (279-311)||(14909762-14909794)
chr1 (20-56)||(16555551-16555587)
chr1 (20-56)||(21771062-21771098)
chr1 (20-56)||(23889676-23889712)
chr1 (19-51)||(26399544-26399576)
chr1 (279-311)||(27142828-27142860)
chr1 (20-56)||(31974776-31974812)
chr1 (20-56)||(35168030-35168066)
chr1 (20-56)||(36454280-36454316)
chr1 (19-51)||(45439266-45439298)
[»] scaffold0053 (2 HSPs)
scaffold0053 (20-56)||(29899-29935)
scaffold0053 (278-311)||(29900-29933)
[»] scaffold0597 (1 HSPs)
scaffold0597 (19-56)||(6500-6537)
[»] scaffold0511 (1 HSPs)
scaffold0511 (19-56)||(5448-5485)
[»] scaffold0111 (1 HSPs)
scaffold0111 (19-56)||(29705-29742)
[»] scaffold0318 (1 HSPs)
scaffold0318 (20-56)||(12397-12433)
[»] scaffold0034 (1 HSPs)
scaffold0034 (21-56)||(83429-83465)
[»] scaffold0013 (1 HSPs)
scaffold0013 (20-56)||(149484-149520)
[»] scaffold0001 (1 HSPs)
scaffold0001 (20-56)||(53544-53580)


Alignment Details
Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 313 - 455
Target Start/End: Original strand, 3678902 - 3679044
Alignment:
Q  313 aagaatgaattaaaaatatgttcatgaagaaagttgaaatagtttgaagaatggattttatcatcgcttcttttcccactttagatagagaatgaccact 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3678902 aagaatgaattaaaaatatgttcatgaagaaagttgaaatagtttgaagaatggattttatcatcgcttcttttcccactttagatagagaatgaccact 3679001  T
Q  413 ccacaaattaattttctttcacgctcgattttagacaaacttg 455  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  3679002 ccacaaattaattttcttccacgctcgattttagacaaacttg 3679044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 7017068 - 7017105
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7017068 aagggttaatggtgctttaccccctgtaatataggtca 7017105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 25562152 - 25562189
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  25562152 aagggttaatggtgctttaccccctgtaatataggtca 25562189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 26101666 - 26101703
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26101666 aagggttaatggtgctttaccccctgtaatataggtca 26101703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 31826213 - 31826245
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||||    
T  31826213 aagggttaatggtgctttaccccctgtaatata 31826245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 33225440 - 33225472
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||||    
T  33225440 aagggttaatggtgctttaccccctgtaatata 33225472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 7017355 - 7017320
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7017355 gggttaatggtgctttaccccctgtaatataggtca 7017320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 7313451 - 7313486
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7313451 gggttaatggtgctttaccccctgtaatataggtca 7313486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 27967466 - 27967501
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  27967466 gggttaatggtgctttaccccctgtaatataggtca 27967501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 33352672 - 33352637
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33352672 gggttaatggtgctttaccccctgtaatataggtca 33352637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 19417980 - 19417946
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacct 312  Q
    |||||||||||||| ||||||||||||||||||||    
T  19417980 gacctatattacagggggtaaagcaccattaacct 19417946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 19417947 - 19417981
Alignment:
Q  22 ggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||| ||||    
T  19417947 ggttaatggtgctttaccccctgtaatataggtca 19417981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 1309784 - 1309821
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  1309784 aagggttaatggtgatttaccccctgtaatataggtca 1309821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 7017104 - 7017071
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  7017104 gacctatattacagggggtaaagcaccattaacc 7017071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 7017321 - 7017354
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  7017321 gacctatattacagggggtaaagcaccattaacc 7017354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 7313485 - 7313452
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  7313485 gacctatattacagggggtaaagcaccattaacc 7313452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 13420187 - 13420224
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  13420187 aagggttaatggtgttttaccccctgtaatataagtca 13420224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 18788916 - 18788949
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| ||||||||||||||||||||    
T  18788916 gacctatattacaaagggtaaagcaccattaacc 18788949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 19376249 - 19376212
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  19376249 aagggttaatggtgctttaccccctataatataggtca 19376212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 22362996 - 22362959
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  22362996 aagggttaatagtgctttaccccctgtaatataggtca 22362959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 25562188 - 25562155
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  25562188 gacctatattacagggggtaaagcaccattaacc 25562155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 25567736 - 25567703
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| ||||||||||||||||||||    
T  25567736 gacctatattacatagggtaaagcaccattaacc 25567703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 26101702 - 26101669
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  26101702 gacctatattacagggggtaaagcaccattaacc 26101669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 27967500 - 27967467
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  27967500 gacctatattacagggggtaaagcaccattaacc 27967467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 29239760 - 29239723
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  29239760 aagggttaatggtgctttacccactgtaatataggtca 29239723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 29239724 - 29239757
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  29239724 gacctatattacagtgggtaaagcaccattaacc 29239757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 33352638 - 33352671
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  33352638 gacctatattacagggggtaaagcaccattaacc 33352671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 13420447 - 13420479
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||| ||||||||||||||||||||||    
T  13420447 acctatattatagagggtaaagcaccattaacc 13420479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 14985366 - 14985330
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  14985366 agggttaatggtgttttaccccctgtaatataagtca 14985330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 24602429 - 24602465
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  24602429 agggttaatggtgctttaccccttgtaatataggtca 24602465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 31826248 - 31826216
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| |||||||||||||||||||    
T  31826248 acctatattacagggggtaaagcaccattaacc 31826216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 33225475 - 33225443
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| |||||||||||||||||||    
T  33225475 acctatattacagggggtaaagcaccattaacc 33225443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 33936487 - 33936447
Alignment:
Q  16 atgaagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||| ||||||||||||||||||||| |||||||| ||||    
T  33936487 atgaaaggttaatggtgctttaccccccgtaatataggtca 33936447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 20514910 - 20514950
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacctaagaat 318  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  20514910 gacctatattacagggggtaaagcaccattaacctaagaat 20514950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 1952733 - 1952770
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  1952733 aagggttaatggtgctttaccccctgtaatataggtca 1952770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 26144156 - 26144193
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26144156 aagggttaatggtgctttaccccctgtaatataggtca 26144193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 35370447 - 35370410
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  35370447 aagggttaatggtgctttaccccctgtaatataggtca 35370410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 36405912 - 36405875
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  36405912 aagggttaatggtgctttaccccctgtaatataggtca 36405875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 46360952 - 46360915
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  46360952 aagggttaatggtgctttaccccctgtaatataggtca 46360915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 47858488 - 47858451
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  47858488 aagggttaatggtgctttaccccctgtaatataggtca 47858451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 54097098 - 54097135
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  54097098 aagggttaatggtgctttaccccctgtaatataggtca 54097135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 3475485 - 3475521
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  3475485 agggttaatggtgctttaccccctgtaatataggtca 3475521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 12878674 - 12878710
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  12878674 agggttaatggtgctttaccccctgtaatataggtca 12878710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 13033184 - 13033148
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  13033184 agggttaatggtgctttaccccctgtaatataggtca 13033148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 33294940 - 33294976
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  33294940 agggttaatggtgctttaccccctgtaatataggtca 33294976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 34318694 - 34318658
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  34318694 agggttaatggtgctttaccccctgtaatatatgtca 34318658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 35904614 - 35904646
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||||    
T  35904614 aagggttaatggtgctttaccccctgtaatata 35904646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 36405658 - 36405694
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  36405658 agggttaatggtgctttaccccctgtaatataggtca 36405694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 12144544 - 12144575
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||||    
T  12144544 agggttaatggtgctttaccccctgtaatata 12144575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 42861380 - 42861411
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||||    
T  42861380 agggttaatggtgctttaccccctgtaatata 42861411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 4431292 - 4431322
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||    
T  4431292 gggttaatggtgctttaccccctgtaatata 4431322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 20514943 - 20514909
Alignment:
Q  22 ggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||| ||||    
T  20514943 ggttaatggtgctttaccccctgtaatataggtca 20514909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 26144404 - 26144374
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||    
T  26144404 gggttaatggtgctttaccccctgtaatata 26144374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 1952769 - 1952736
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  1952769 gacctatattacagggggtaaagcaccattaacc 1952736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 3475520 - 3475487
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  3475520 gacctatattacagggggtaaagcaccattaacc 3475487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 7086125 - 7086088
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  7086125 aagggttaatggtgttttaccccctgtaatataggtca 7086088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 12144579 - 12144546
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  12144579 gacctatattacagggggtaaagcaccattaacc 12144546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 12878709 - 12878676
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  12878709 gacctatattacagggggtaaagcaccattaacc 12878676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 13033149 - 13033182
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  13033149 gacctatattacagggggtaaagcaccattaacc 13033182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 26144192 - 26144159
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  26144192 gacctatattacagggggtaaagcaccattaacc 26144159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 30966610 - 30966647
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  30966610 aagggttaatggtgctttaccccctataatataggtca 30966647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 31857266 - 31857229
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  31857266 aagggttaatagtgctttaccccctgtaatatatgtca 31857229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 33294975 - 33294942
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  33294975 gacctatattacagggggtaaagcaccattaacc 33294942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 35370411 - 35370444
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  35370411 gacctatattacagggggtaaagcaccattaacc 35370444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 36405693 - 36405660
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  36405693 gacctatattacagggggtaaagcaccattaacc 36405660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 36405876 - 36405909
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  36405876 gacctatattacagggggtaaagcaccattaacc 36405909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 46360916 - 46360949
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  46360916 gacctatattacagggggtaaagcaccattaacc 46360949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 47858452 - 47858485
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  47858452 gacctatattacagggggtaaagcaccattaacc 47858485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 52439337 - 52439374
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  52439337 aagggttaatggtgttttaccccctgtaatataggtca 52439374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 54097134 - 54097101
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  54097134 gacctatattacagggggtaaagcaccattaacc 54097101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 3475752 - 3475716
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  3475752 agggttaatggtgctttgccccctgtaatataggtca 3475716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 4431325 - 4431293
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| |||||||||||||||||||    
T  4431325 acctatattacagggggtaaagcaccattaacc 4431293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 5496605 - 5496569
Alignment:
Q  15 aatgaagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||| |||||||||| |||||||    
T  5496605 aatgaagggttaatggtgttttaccccctataatata 5496569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 6439184 - 6439220
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  6439184 agggttaatagtgctttaccccctgtaatataggtca 6439220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 6439479 - 6439443
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  6439479 agggttattggtgctttaccccctgtaatataggtca 6439443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 8590857 - 8590829
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaa 47  Q
    |||||||||||||||||||||||||||||    
T  8590857 aagggttaatggtgctttaccccctgtaa 8590829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 13032886 - 13032922
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  13032886 agggttaatggtgttttaccccctgtaatataggtca 13032922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 15782261 - 15782297
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  15782261 agggttaatggtgctttaccccttgtaatataggtca 15782297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 27449861 - 27449893
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    ||||| |||||||||||||||||||||||||||    
T  27449861 aagggctaatggtgctttaccccctgtaatata 27449893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 27450154 - 27450118
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  27450154 agggttaatggtgttttaccccctgtaatatatgtca 27450118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 28292052 - 28292088
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  28292052 agggttaatggtgttttaccccctgtaatataggtca 28292088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 32595925 - 32595893
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||| ||||||||||||||||||    
T  32595925 aagggttaatggtgatttaccccctgtaatata 32595893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 35804124 - 35804088
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  35804124 agggttaatggtgctttacaccctgtaatataggtca 35804088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 35904910 - 35904874
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  35904910 agggttaatggtgctttactccctgtaatataggtca 35904874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 36680242 - 36680210
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||| |||||||    
T  36680242 aagggttaatggtgctttaccccctataatata 36680210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 18655372 - 18655411
Alignment:
Q  17 tgaagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  18655372 tgaagggttaatggtgctttaccccctgtaatataggtca 18655411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 31417563 - 31417524
Alignment:
Q  17 tgaagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  31417563 tgaagggttaatggtgctttaccccctgtaatataggtca 31417524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 28000177 - 28000140
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28000177 aagggttaatggtgctttaccccctgtaatataggtca 28000140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 44412591 - 44412554
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  44412591 aagggttaatggtgctttaccccctgtaatataggtca 44412554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 43596570 - 43596534
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  43596570 agggttaatggtgctttaccccctgtaatataggtca 43596534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 45639782 - 45639746
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  45639782 agggttaatggtgctttaccccctgtaatataggtca 45639746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 5031922 - 5031957
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  5031922 gggttaatggtgctttaccccctgtaatatatgtca 5031957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 21852764 - 21852795
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||||    
T  21852764 agggttaatggtgctttaccccctgtaatata 21852795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 1263785 - 1263815
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||    
T  1263785 gggttaatggtgctttaccccctgtaatata 1263815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 311
Target Start/End: Complemental strand, 29017864 - 29017834
Alignment:
Q  281 ctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||||||||||||||||||||    
T  29017864 ctatattacagagggtaaagcaccattaacc 29017834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 31533920 - 31533954
Alignment:
Q  17 tgaagggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||| |||||||||||||||||||||    
T  31533920 tgaagggttaatgatgctttaccccctgtaatata 31533954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 13592733 - 13592770
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  13592733 aagggttaatggtgcattaccccctgtaatatatgtca 13592770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 15108090 - 15108123
Alignment:
Q  23 gttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||| ||||    
T  15108090 gttaatggtgctttaccccctgtaatataggtca 15108123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 18655410 - 18655377
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  18655410 gacctatattacagggggtaaagcaccattaacc 18655377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 19336041 - 19336078
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  19336041 aagggttaatggtgttttaccccctgtaatataggtca 19336078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 27880907 - 27880874
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||||||| |||||||||||||||    
T  27880907 gacctatattacagagggcaaagcaccattaacc 27880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 28000141 - 28000174
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  28000141 gacctatattacagggggtaaagcaccattaacc 28000174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 30335441 - 30335404
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  30335441 aagggttgatggtgctttaccccctgtaatataggtca 30335404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 31417525 - 31417558
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  31417525 gacctatattacagggggtaaagcaccattaacc 31417558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 43596535 - 43596568
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  43596535 gacctatattacagggggtaaagcaccattaacc 43596568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 44412555 - 44412588
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  44412555 gacctatattacagggggtaaagcaccattaacc 44412588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 45639747 - 45639780
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  45639747 gacctatattacagggggtaaagcaccattaacc 45639780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 2456432 - 2456460
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaa 47  Q
    |||||||||||||||||||||||||||||    
T  2456432 aagggttaatggtgctttaccccctgtaa 2456460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 10659731 - 10659767
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  10659731 agggttaatggtgctttaccccctgcaatataggtca 10659767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 15108122 - 15108090
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaac 310  Q
    |||||||||||||| ||||||||||||||||||    
T  15108122 gacctatattacagggggtaaagcaccattaac 15108090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 21853028 - 21852992
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  21853028 agggttaatggtgctttacctcctgtaatataggtca 21852992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 35097623 - 35097587
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacctaa 314  Q
    |||||||||||||| |||||||| |||||||||||||    
T  35097623 gacctatattacagggggtaaagtaccattaacctaa 35097587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 14506 - 14469
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  14506 aagggttaatggtgctttaccccctgtaatataggtca 14469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 14470 - 14503
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  14470 gacctatattacagggggtaaagcaccattaacc 14503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 21692664 - 21692627
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  21692664 aagggttaatggtgctttaccccctgtaatataggtca 21692627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 23565928 - 23565895
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||||||||||||||||||||||||    
T  23565928 gacctatattacagagggtaaagcaccattaacc 23565895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 41708826 - 41708863
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  41708826 aagggttaatggtgctttaccccctgtaatataggtca 41708863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 43383049 - 43383012
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43383049 aagggttaatggtgctttaccccctgtaatataggtca 43383012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 22686742 - 22686778
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  22686742 agggttaatggtgctttaccccctgtaatataggtca 22686778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 23564101 - 23564137
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  23564101 agggttaatggtgctttaccccctgtaatataggtca 23564137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 45530501 - 45530537
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  45530501 agggttaatggtgctttaccccctgtaatataggtca 45530537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 3785525 - 3785560
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  3785525 gggttaatggtgctttaccccctgtaatataggtca 3785560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 18367026 - 18367061
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18367026 gggttaatggtgctttaccccctgtaatataggtca 18367061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 19158224 - 19158189
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19158224 gggttaatggtgctttaccccctgtaatataggtca 19158189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 3785559 - 3785521
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacctaaga 316  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  3785559 gacctatattacagggggtaaagcaccattaacccaaga 3785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 18367060 - 18367027
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  18367060 gacctatattacagggggtaaagcaccattaacc 18367027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 19157928 - 19157965
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  19157928 aagggttaatggtgctttaccccctgttatataggtca 19157965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 19158190 - 19158223
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  19158190 gacctatattacagggggtaaagcaccattaacc 19158223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 21692628 - 21692661
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  21692628 gacctatattacagggggtaaagcaccattaacc 21692661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 22686777 - 22686744
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  22686777 gacctatattacagggggtaaagcaccattaacc 22686744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 23564136 - 23564103
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  23564136 gacctatattacagggggtaaagcaccattaacc 23564103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 23565892 - 23565929
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  23565892 aagggttaatggtgctttaccctctgtaatataggtca 23565929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 33317892 - 33317859
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| ||||||||||||||||||||    
T  33317892 gacctatattacatagggtaaagcaccattaacc 33317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 38687348 - 38687385
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  38687348 aagggttaatagtgctttaccccttgtaatatacgtca 38687385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 41708862 - 41708829
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  41708862 gacctatattacagggggtaaagcaccattaacc 41708829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 43383013 - 43383046
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  43383013 gacctatattacagggggtaaagcaccattaacc 43383046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 45530536 - 45530503
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  45530536 gacctatattacagggggtaaagcaccattaacc 45530503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 11961161 - 11961125
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  11961161 agggttaatggtggtttaccccctgtaatataggtca 11961125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 15152343 - 15152311
Alignment:
Q  24 ttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||| ||||    
T  15152343 ttaatggtgctttaccccctgtaatataggtca 15152311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 23428996 - 23428964
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||| ||||||||||||||||||    
T  23428996 aagggttaatggtgttttaccccctgtaatata 23428964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 30222145 - 30222109
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  30222145 agggttaatagtgctttaccccctgtaatataggtca 30222109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 31343660 - 31343624
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  31343660 agggttaatggtgctttaccccatgtaatataggtca 31343624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 38132119 - 38132083
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  38132119 agggttaatggtgttttaccccctgtaatataggtca 38132083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 39301879 - 39301911
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||| |||||||||||||    
T  39301879 aagggttaatggtgctttatcccctgtaatata 39301911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 2724482 - 2724519
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2724482 aagggttaatggtgctttaccccctgtaatataggtca 2724519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 35936536 - 35936568
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||||    
T  35936536 aagggttaatggtgctttaccccctgtaatata 35936568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 4633954 - 4633989
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  4633954 gggttaatggtgctttaccccctgtaatataggtca 4633989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 5661932 - 5661901
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||||    
T  5661932 agggttaatggtgctttaccccctgtaatata 5661901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 9672897 - 9672932
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9672897 gggttaatggtgctttaccccctgtaatataggtca 9672932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 10598319 - 10598354
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10598319 gggttaatggtgctttaccccctgtaatataggtca 10598354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 13012435 - 13012470
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13012435 gggttaatggtgctttaccccctgtaatataggtca 13012470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 13083845 - 13083880
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13083845 gggttaatggtgctttaccccctgtaatataggtca 13083880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 36518916 - 36518881
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  36518916 gggttaatggtgctttaccccctgtaatataggtca 36518881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 37631599 - 37631633
Alignment:
Q  22 ggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||| ||||    
T  37631599 ggttaatggtgctttaccccctgtaatatatgtca 37631633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 2724518 - 2724485
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  2724518 gacctatattacagggggtaaagcaccattaacc 2724485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 4633988 - 4633955
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  4633988 gacctatattacagggggtaaagcaccattaacc 4633955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 9672931 - 9672898
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  9672931 gacctatattacagggggtaaagcaccattaacc 9672898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 10598353 - 10598320
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  10598353 gacctatattacagggggtaaagcaccattaacc 10598320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 13012469 - 13012436
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  13012469 gacctatattacagggggtaaagcaccattaacc 13012436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 13083879 - 13083846
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  13083879 gacctatattacagggggtaaagcaccattaacc 13083846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 18254427 - 18254390
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  18254427 aagggttaatggtgatttaccccctgtaatataggtca 18254390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 27433518 - 27433555
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  27433518 aagggttaatggtgctttatcccctgtaatatatgtca 27433555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 36518882 - 36518915
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  36518882 gacctatattacagggggtaaagcaccattaacc 36518915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 12496795 - 12496767
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaa 47  Q
    |||||||||||||||||||||||||||||    
T  12496795 aagggttaatggtgctttaccccctgtaa 12496767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 16920715 - 16920683
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||| ||||||||||||||||||||||    
T  16920715 aagggttaatagtgctttaccccctgtaatata 16920683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 26785816 - 26785780
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacctaa 314  Q
    |||||||||||||| |||||| |||||||||||||||    
T  26785816 gacctatattacagggggtaatgcaccattaacctaa 26785780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 28593582 - 28593546
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  28593582 agggttaatggtgctttaacccctgtaatataggtca 28593546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000007; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 17261023 - 17261060
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17261023 aagggttaatggtgctttaccccctgtaatataggtca 17261060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 29853405 - 29853442
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  29853405 aagggttaatggtgctttaccccctgtaatataagtca 29853442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 35434131 - 35434094
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  35434131 aagggttaatggtgctttaccccctgtaatataggtca 35434094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 41301337 - 41301300
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  41301337 aagggttaatggtgctttaccccctgtaatatatgtca 41301300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 54012647 - 54012610
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  54012647 aagggttaatggtgctttaccccctgtaatataggtca 54012610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 55090302 - 55090265
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  55090302 aagggttaatggtgctttaccccctgtaatataggtca 55090265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 1351525 - 1351489
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  1351525 agggttaatggtgctttaccccctgtaatataggtca 1351489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 9559033 - 9559065
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||||    
T  9559033 aagggttaatggtgctttaccccctgtaatata 9559065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 11761081 - 11761117
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  11761081 agggttaatggtgctttaccccctgtaatataggtca 11761117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 16876140 - 16876172
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||||    
T  16876140 aagggttaatggtgctttaccccctgtaatata 16876172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 35359471 - 35359507
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  35359471 agggttaatggtgctttaccccctgtaatataggtca 35359507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 39846638 - 39846602
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  39846638 agggttaatggtgctttaccccctgtaatataggtca 39846602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 48418653 - 48418689
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  48418653 agggttaatggtgctttaccccctgtaatataggtca 48418689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 19598965 - 19598930
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19598965 gggttaatggtgctttaccccctgtaatataagtca 19598930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 311
Target Start/End: Complemental strand, 21549782 - 21549751
Alignment:
Q  280 cctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||||||||||||||||||||||    
T  21549782 cctatattacagagggtaaagcaccattaacc 21549751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 29853685 - 29853654
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||||    
T  29853685 agggttaatggtgctttaccccctgtaatata 29853654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 33898073 - 33898108
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33898073 gggttaatggtgctttaccccctgtaatataggtca 33898108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 33898330 - 33898299
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||||    
T  33898330 agggttaatggtgctttaccccctgtaatata 33898299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 40066706 - 40066741
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  40066706 gggttaatggtgctttaccccctgtaatataggtca 40066741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 46994149 - 46994118
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||||    
T  46994149 agggttaatggtgctttaccccctgtaatata 46994118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 51688011 - 51688041
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||    
T  51688011 gggttaatggtgctttaccccctgtaatata 51688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 1351490 - 1351523
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  1351490 gacctatattacagggggtaaagcaccattaacc 1351523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 4548544 - 4548581
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  4548544 aagggttaatggtgctttaccccctctaatataggtca 4548581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 11761116 - 11761083
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  11761116 gacctatattacagggggtaaagcaccattaacc 11761083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 17261059 - 17261026
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  17261059 gacctatattacagggggtaaagcaccattaacc 17261026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 19301177 - 19301214
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  19301177 aagggttaatggtgttttaccccctgtaatataggtca 19301214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 25024537 - 25024574
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  25024537 aagggttaatagtgctttaccccctgtaatatatgtca 25024574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 29853650 - 29853683
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  29853650 gacctatattacagggggtaaagcaccattaacc 29853683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 31341224 - 31341261
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  31341224 aagggttaatggtgctttatcccctgtaatataggtca 31341261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 33898107 - 33898074
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  33898107 gacctatattacagggggtaaagcaccattaacc 33898074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 35359506 - 35359473
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  35359506 gacctatattacagggggtaaagcaccattaacc 35359473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 35434095 - 35434128
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  35434095 gacctatattacagggggtaaagcaccattaacc 35434128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 39846603 - 39846636
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  39846603 gacctatattacagggggtaaagcaccattaacc 39846636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 40066740 - 40066707
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  40066740 gacctatattacagggggtaaagcaccattaacc 40066707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 44512277 - 44512314
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  44512277 aagggttaatggtgctttaccccctataatatatgtca 44512314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 45333958 - 45333921
Alignment:
Q  177 taaagtcgttttttaatgacctattatgagggtattcc 214  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  45333958 taaagtcgtttttttatgacctattatgggggtattcc 45333921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 48418688 - 48418655
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  48418688 gacctatattacagggggtaaagcaccattaacc 48418655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 48489004 - 48489037
Alignment:
Q  18 gaagggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||| ||||||||||||||||||||||    
T  48489004 gaagggttaattgtgctttaccccctgtaatata 48489037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 53667678 - 53667715
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  53667678 aagggttaatggtgatttaccccctgtaatataggtca 53667715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 54012611 - 54012644
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  54012611 gacctatattacagggggtaaagcaccattaacc 54012644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 55090266 - 55090299
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  55090266 gacctatattacagggggtaaagcaccattaacc 55090299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 3820493 - 3820529
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  3820493 agggttaatggtgttttaccccctgtaatataggtca 3820529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 8487940 - 8487976
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacctaa 314  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  8487940 gacctatattacagggggtaaaacaccattaacctaa 8487976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 21550039 - 21550003
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  21550039 agggttaatggtgctttaccgcctgtaatataggtca 21550003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 30451589 - 30451553
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  30451589 agggttaattgtgctttaccccctgtaatataggtca 30451553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 31341499 - 31341463
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  31341499 agggttaatggtgctttacctcctgtaatataggtca 31341463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 33898296 - 33898328
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| |||||||||||||||||||    
T  33898296 acctatattacagggggtaaagcaccattaacc 33898328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 46994115 - 46994147
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| |||||||||||||||||||    
T  46994115 acctatattacagggggtaaagcaccattaacc 46994147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 54087788 - 54087752
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  54087788 agggttaatggtgttttaccccctgtaatataggtca 54087752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000007; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 7327766 - 7327803
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7327766 aagggttaatggtgctttaccccctgtaatataggtca 7327803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 8898333 - 8898300
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||||||||||||||||||||||||    
T  8898333 gacctatattacagagggtaaagcaccattaacc 8898300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 23834525 - 23834488
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  23834525 aagggttaatggtgctttaccccctgtaatatatgtca 23834488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 28739406 - 28739443
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  28739406 aagggttaatggtgctttaccccctgtaatataggtca 28739443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 32845455 - 32845492
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  32845455 aagggttaatggtgctttaccccctgtaatataggtca 32845492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 43766544 - 43766503
Alignment:
Q  15 aatgaagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||| |||||||||||||||||||||||||||||||| ||||    
T  43766544 aatgtagggttaatggtgctttaccccctgtaatataggtca 43766503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 8214617 - 8214581
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  8214617 agggttaatggtgctttaccccctgtaatataggtca 8214581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 13692033 - 13691997
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  13692033 agggttaatggtgctttaccccctgtaatataagtca 13691997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 14793513 - 14793477
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  14793513 agggttaatggtgctttaccccctgtaatataggtca 14793477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 24952113 - 24952077
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  24952113 agggttaatggtgctttaccccctgtaatataggtca 24952077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 32845720 - 32845684
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  32845720 agggttaatggtgctttaccccctgtaatataggtca 32845684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 36944288 - 36944252
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  36944288 agggttaatggtgctttaccccctgtaatataggtca 36944252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 17920285 - 17920250
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17920285 gggttaatggtgctttaccccctgtaatataggtca 17920250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 29640763 - 29640798
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29640763 gggttaatggtgctttaccccctgtaatataggtca 29640798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 33441504 - 33441535
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||||    
T  33441504 agggttaatggtgctttaccccctgtaatata 33441535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 38358548 - 38358513
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  38358548 gggttaatggtgctttaccccctgtaatataggtca 38358513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 44610927 - 44610957
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||    
T  44610927 gggttaatggtgctttaccccctgtaatata 44610957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 758804 - 758767
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  758804 aagggttaatagtgctttaccccctgtaatataggtca 758767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 1366824 - 1366795
Alignment:
Q  22 ggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||    
T  1366824 ggttaatggtgctttaccccctgtaatata 1366795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 7327802 - 7327769
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  7327802 gacctatattacagggggtaaagcaccattaacc 7327769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 8214582 - 8214615
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  8214582 gacctatattacagggggtaaagcaccattaacc 8214615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 14793478 - 14793511
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  14793478 gacctatattacagggggtaaagcaccattaacc 14793511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 17920251 - 17920284
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  17920251 gacctatattacagggggtaaagcaccattaacc 17920284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 18544029 - 18544062
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||||||||||| |||||||||||    
T  18544029 gacctatattacagagggtaaaacaccattaacc 18544062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 22552503 - 22552540
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  22552503 aagggttaatggtgttttaccccctgtaatataggtca 22552540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 24952078 - 24952111
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  24952078 gacctatattacagggggtaaagcaccattaacc 24952111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 28739442 - 28739409
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  28739442 gacctatattacagggggtaaagcaccattaacc 28739409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 29640797 - 29640764
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  29640797 gacctatattacagggggtaaagcaccattaacc 29640764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 32649851 - 32649884
Alignment:
Q  18 gaagggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  32649851 gaagggttaatggtgctttactccctgtaatata 32649884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 32845491 - 32845458
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  32845491 gacctatattacagggggtaaagcaccattaacc 32845458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 32845685 - 32845718
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  32845685 gacctatattacagggggtaaagcaccattaacc 32845718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 34181864 - 34181827
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  34181864 aagggttaatggtgctttaccccctataatatatgtca 34181827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 35337056 - 35337093
Alignment:
Q  177 taaagtcgttttttaatgacctattatgagggtattcc 214  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  35337056 taaagtcgtttttttatgacctattaggagggtattcc 35337093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 36944253 - 36944286
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  36944253 gacctatattacagggggtaaagcaccattaacc 36944286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 38358514 - 38358547
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  38358514 gacctatattacagggggtaaagcaccattaacc 38358547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 40385245 - 40385278
Alignment:
Q  23 gttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||| ||||    
T  40385245 gttaatggtgctttaccccctgtaatataggtca 40385278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 41101073 - 41101032
Alignment:
Q  15 aatgaagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||| ||||||||| |||||||||||||||||||||| ||||    
T  41101073 aatgtagggttaatagtgctttaccccctgtaatataggtca 41101032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 43766504 - 43766537
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  43766504 gacctatattacagggggtaaagcaccattaacc 43766537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 45632541 - 45632578
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  45632541 aagggttaatggtgttttaccccctgtaatataggtca 45632578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 1060878 - 1060842
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  1060878 agggttaatggtgctttaccccccgtaatataagtca 1060842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 5856324 - 5856296
Alignment:
Q  23 gttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||    
T  5856324 gttaatggtgctttaccccctgtaatata 5856296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 8214342 - 8214378
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  8214342 agggttaatggtgttttaccccctgtaatataggtca 8214378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 8898298 - 8898334
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  8898298 agggttaatggtgctttaccctctgtaatataggtca 8898334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 14793251 - 14793287
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  14793251 agggttaatggtgttttaccccctgtaatataggtca 14793287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 16361193 - 16361161
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||| |||||||||||    
T  16361193 aagggttaatggtgctttacctcctgtaatata 16361161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 19686238 - 19686206
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||| ||||||||||||||||||||||    
T  19686238 aagggttaatagtgctttaccccctgtaatata 19686206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 24951903 - 24951939
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  24951903 agggttaatggtgctttaacccctgtaatataggtca 24951939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 33441538 - 33441506
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| |||||||||||||||||||    
T  33441538 acctatattacagggggtaaagcaccattaacc 33441506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 35916382 - 35916418
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  35916382 agggttaatggtgctttactccctgtaatatatgtca 35916418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 39341265 - 39341301
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  39341265 agggttaatggtgttttaccccctgtaatataggtca 39341301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 39341413 - 39341377
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  39341413 agggttaatggtgttttaccccctgtaatataggtca 39341377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 40385277 - 40385245
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaac 310  Q
    |||||||||||||| ||||||||||||||||||    
T  40385277 gacctatattacagggggtaaagcaccattaac 40385245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 41611618 - 41611582
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  41611618 agggttaatggtgttttaccccctgtaatataggtca 41611582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 44610960 - 44610928
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| |||||||||||||||||||    
T  44610960 acctatattacagggggtaaagcaccattaacc 44610928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000007; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 13295833 - 13295870
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  13295833 aagggttaatggtgctttaccccctgtaatataagtca 13295870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 24004083 - 24004120
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24004083 aagggttaatggtgctttaccccctgtaatatatgtca 24004120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 26486828 - 26486791
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26486828 aagggttaatggtgctttaccccctgtaatataggtca 26486791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 39160428 - 39160469
Alignment:
Q  15 aatgaagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  39160428 aatgaagggttaatggtgctttaccccctgtcatataggtca 39160469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 46583860 - 46583827
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||||||||||||||||||||||||    
T  46583860 gacctatattacagagggtaaagcaccattaacc 46583827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 52413119 - 52413156
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  52413119 aagggttaatggtgctttaccccctgtaatataggtca 52413156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 13296074 - 13296038
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  13296074 agggttaatggtgctttaccccctgtaatataagtca 13296038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 16555324 - 16555360
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  16555324 agggttaatggtgctttaccccctgtaatataggtca 16555360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 7454889 - 7454924
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7454889 gggttaatggtgctttaccccctgtaatataggtca 7454924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 35384513 - 35384478
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  35384513 gggttaatggtgctttaccccctgtaatataggtca 35384478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 37847828 - 37847793
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  37847828 gggttaatggtgctttaccccctgtaatataggtca 37847793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 39160589 - 39160554
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||||||||| ||||    
T  39160589 gggttaatggtgctttaccccctgtaatataggtca 39160554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 39657272 - 39657303
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||||||||||||||    
T  39657272 agggttaatggtgctttaccccctgtaatata 39657303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 24004810 - 24004772
Alignment:
Q  18 gaagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  24004810 gaagggttaatggtgctttaccccttgtaatataggtca 24004772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 27142861 - 27142831
Alignment:
Q  21 gggttaatggtgctttaccccctgtaatata 51  Q
    |||||||||||||||||||||||||||||||    
T  27142861 gggttaatggtgctttaccccctgtaatata 27142831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 311
Target Start/End: Complemental strand, 34945683 - 34945653
Alignment:
Q  281 ctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||||||||||||||||||||    
T  34945683 ctatattacagagggtaaagcaccattaacc 34945653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 7454923 - 7454890
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  7454923 gacctatattacagggggtaaagcaccattaacc 7454890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 13693584 - 13693555
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaat 48  Q
    ||||||||||||||||||||||||||||||    
T  13693584 aagggttaatggtgctttaccccctgtaat 13693555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 16555359 - 16555326
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  16555359 gacctatattacagggggtaaagcaccattaacc 16555326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 17724325 - 17724288
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  17724325 aagggttaatggtgttttaccccctgtaatataggtca 17724288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 26486792 - 26486825
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  26486792 gacctatattacagggggtaaagcaccattaacc 26486825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 34945884 - 34945917
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||||||||||| |||||||||||    
T  34945884 gacctatattacagagggtaaaacaccattaacc 34945917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 35384479 - 35384512
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  35384479 gacctatattacagggggtaaagcaccattaacc 35384512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 37847794 - 37847827
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  37847794 gacctatattacagggggtaaagcaccattaacc 37847827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 39160555 - 39160588
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  39160555 gacctatattacagggggtaaagcaccattaacc 39160588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 43412979 - 43413016
Alignment:
Q  177 taaagtcgttttttaatgacctattatgagggtattcc 214  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  43412979 taaagtcgtttttttatgacctattaggagggtattcc 43413016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 50880115 - 50880078
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  50880115 aagggttaatggtgttttaccccctgtaatataagtca 50880078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 52413155 - 52413122
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  52413155 gacctatattacagggggtaaagcaccattaacc 52413122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 47
Target Start/End: Original strand, 4352120 - 4352148
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaa 47  Q
    |||||||||||||||||||||||||||||    
T  4352120 aagggttaatggtgctttaccccctgtaa 4352148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 10176436 - 10176472
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  10176436 agggttaatggtgctttaccccccgtaatataggtca 10176472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 14909794 - 14909762
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||||||||||||||| |||||||    
T  14909794 acctatattacagagggtaaagcactattaacc 14909762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 16555587 - 16555551
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  16555587 agggttaatggtgctttactccctgtaatataggtca 16555551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 21771098 - 21771062
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  21771098 agggttaatagtgctttaccccctgtaatataggtca 21771062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 23889676 - 23889712
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  23889676 agggttaaaggtgctttaccccctgtaatataggtca 23889712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 26399576 - 26399544
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||||||||||||||| |||||||||||    
T  26399576 aagggttaatggtgctttacctcctgtaatata 26399544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 27142828 - 27142860
Alignment:
Q  279 acctatattacagagggtaaagcaccattaacc 311  Q
    ||||||||||||| |||||||||||||||||||    
T  27142828 acctatattacagggggtaaagcaccattaacc 27142860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 31974776 - 31974812
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  31974776 agggttaatggtactttaccccctgtaatataggtca 31974812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 35168066 - 35168030
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  35168066 agggttaatagtgctttaccccctgtaatataggtca 35168030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 36454280 - 36454316
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  36454280 agggttaatggtgctttaccccctttaatatatgtca 36454316  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 45439266 - 45439298
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatata 51  Q
    ||||||||| |||||||||||||||||||||||    
T  45439266 aagggttaaaggtgctttaccccctgtaatata 45439298  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 29935 - 29899
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||||||||||||||||||||| ||||    
T  29935 agggttaatggtgctttaccccctgtaatataggtca 29899  T

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Target: scaffold0053; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 29900 - 29933
Alignment:
Q  278 gacctatattacagagggtaaagcaccattaacc 311  Q
    |||||||||||||| |||||||||||||||||||    
T  29900 gacctatattacagggggtaaagcaccattaacc 29933  T

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Target: scaffold0597 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 6537 - 6500
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  6537 aagggttaatgttgctttaccccctgtaatataggtca 6500  T

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Target: scaffold0511 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 5485 - 5448
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  5485 aagggttaatggtgctttaccccttgtaatataggtca 5448  T

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Target: scaffold0111 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 29742 - 29705
Alignment:
Q  19 aagggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  29742 aagggttaatggtgttttaccccctgtaatataggtca 29705  T

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Target: scaffold0318 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 12397 - 12433
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  12397 agggttaatgatgctttaccccctgtaatataggtca 12433  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 83429 - 83465
Alignment:
Q  21 gggttaatggtgctttaccccc-tgtaatatacgtca 56  Q
    |||||||||||||||||||||| ||||||||||||||    
T  83429 gggttaatggtgctttacccccatgtaatatacgtca 83465  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 149484 - 149520
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  149484 agggttaatggtgctttaccccctgaaatataggtca 149520  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 53580 - 53544
Alignment:
Q  20 agggttaatggtgctttaccccctgtaatatacgtca 56  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  53580 agggttaacggtgctttaccccctgtaatataggtca 53544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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