View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13686_high_30 (Length: 205)
Name: NF13686_high_30
Description: NF13686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13686_high_30 |
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Alignment Details
Target: chr2 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 11654418 - 11654384
Alignment:
| Q |
122 |
ttatgttggttatgtggtggagaagagctattagg |
156 |
Q |
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| T |
11654418 |
ttatgttggttatgtggtggagaagagctattagg |
11654384 |
T |
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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 11668183 - 11668149
Alignment:
| Q |
122 |
ttatgttggttatgtggtggagaagagctattagg |
156 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
11668183 |
ttatgttggttatgtggtggagaagagctattagg |
11668149 |
T |
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