View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13686_low_16 (Length: 258)

Name: NF13686_low_16
Description: NF13686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13686_low_16
NF13686_low_16
[»] chr6 (31 HSPs)
chr6 (17-238)||(13628166-13628388)
chr6 (111-220)||(29355859-29355970)
chr6 (111-220)||(12221918-12222030)
chr6 (111-220)||(1354761-1354868)
chr6 (111-220)||(1346986-1347093)
chr6 (118-218)||(1941879-1941979)
chr6 (111-220)||(26097182-26097289)
chr6 (111-184)||(383764-383837)
chr6 (120-220)||(7947384-7947485)
chr6 (119-220)||(9161145-9161247)
chr6 (111-170)||(3116133-3116192)
chr6 (111-220)||(25557747-25557854)
chr6 (124-220)||(32579448-32579543)
chr6 (172-219)||(6024256-6024303)
chr6 (117-220)||(18277203-18277306)
chr6 (118-220)||(23930138-23930238)
chr6 (174-220)||(8409265-8409311)
chr6 (111-186)||(12885967-12886044)
chr6 (118-220)||(33138855-33138957)
chr6 (111-193)||(17432395-17432479)
chr6 (120-220)||(23240837-23240935)
chr6 (119-220)||(32728169-32728269)
chr6 (107-209)||(24751068-24751176)
chr6 (117-220)||(3815087-3815190)
chr6 (153-220)||(12228380-12228447)
chr6 (165-220)||(20400689-20400744)
chr6 (123-215)||(24097608-24097696)
chr6 (120-220)||(15866052-15866150)
chr6 (111-144)||(30786378-30786411)
chr6 (117-161)||(11395842-11395886)
chr6 (111-179)||(13267788-13267856)
[»] chr2 (50 HSPs)
chr2 (111-220)||(11514458-11514566)
chr2 (111-220)||(8455320-8455429)
chr2 (111-220)||(9671203-9671310)
chr2 (111-220)||(10546184-10546294)
chr2 (106-220)||(10543720-10543836)
chr2 (111-220)||(14530340-14530451)
chr2 (111-220)||(36871515-36871622)
chr2 (127-221)||(32781308-32781402)
chr2 (106-220)||(40762233-40762347)
chr2 (123-219)||(99281-99375)
chr2 (119-220)||(14444751-14444851)
chr2 (104-219)||(25079714-25079830)
chr2 (100-227)||(19977707-19977834)
chr2 (111-189)||(24859992-24860070)
chr2 (111-212)||(17668032-17668133)
chr2 (111-219)||(17623587-17623695)
chr2 (111-220)||(24200627-24200738)
chr2 (121-219)||(17896282-17896381)
chr2 (117-219)||(4516361-4516463)
chr2 (111-216)||(21779265-21779368)
chr2 (111-220)||(23397788-23397895)
chr2 (120-202)||(24890451-24890533)
chr2 (111-220)||(25249742-25249850)
chr2 (106-203)||(25632548-25632645)
chr2 (113-202)||(26684626-26684715)
chr2 (117-202)||(44643563-44643648)
chr2 (119-220)||(7214556-7214659)
chr2 (117-220)||(12023929-12024031)
chr2 (113-200)||(25641543-25641630)
chr2 (113-220)||(30826059-30826164)
chr2 (122-227)||(15296421-15296527)
chr2 (111-220)||(39914310-39914419)
chr2 (113-218)||(31158445-31158552)
chr2 (113-193)||(39499236-39499316)
chr2 (119-219)||(19615015-19615116)
chr2 (123-193)||(13245111-13245181)
chr2 (126-220)||(44521392-44521486)
chr2 (111-204)||(12315656-12315749)
chr2 (116-219)||(17471571-17471676)
chr2 (153-220)||(22371079-22371143)
chr2 (127-227)||(33795300-33795400)
chr2 (111-220)||(40416875-40416984)
chr2 (153-220)||(5450307-5450375)
chr2 (106-144)||(124913-124951)
chr2 (172-218)||(23145763-23145809)
chr2 (172-218)||(23557553-23557599)
chr2 (111-217)||(27573646-27573751)
chr2 (114-220)||(30864424-30864529)
chr2 (111-144)||(22371210-22371243)
chr2 (119-218)||(44449395-44449495)
[»] chr8 (43 HSPs)
chr8 (112-220)||(29521690-29521798)
chr8 (111-227)||(45071280-45071395)
chr8 (111-220)||(28817630-28817739)
chr8 (119-220)||(36720818-36720919)
chr8 (111-220)||(39460998-39461109)
chr8 (117-220)||(44530171-44530274)
chr8 (102-220)||(35261701-35261819)
chr8 (119-220)||(29877116-29877217)
chr8 (111-220)||(6760844-6760955)
chr8 (111-219)||(13160725-13160832)
chr8 (117-220)||(8483948-8484051)
chr8 (111-220)||(30454101-30454208)
chr8 (111-220)||(26954154-26954266)
chr8 (117-220)||(12670260-12670361)
chr8 (106-220)||(2626541-2626658)
chr8 (117-220)||(5135300-5135402)
chr8 (112-214)||(5689659-5689761)
chr8 (111-220)||(10857850-10857960)
chr8 (111-220)||(12625911-12626021)
chr8 (107-220)||(18164760-18164872)
chr8 (117-220)||(20284079-20284186)
chr8 (119-220)||(22598179-22598279)
chr8 (111-220)||(20869945-20870056)
chr8 (117-220)||(21070707-21070815)
chr8 (117-220)||(7136537-7136642)
chr8 (118-219)||(24365071-24365172)
chr8 (119-220)||(8897776-8897877)
chr8 (111-190)||(31457224-31457303)
chr8 (117-227)||(44742528-44742639)
chr8 (120-220)||(44781517-44781619)
chr8 (114-220)||(389665-389773)
chr8 (111-220)||(17823598-17823707)
chr8 (111-200)||(19729382-19729471)
chr8 (117-193)||(26457778-26457852)
chr8 (117-185)||(16013511-16013581)
chr8 (117-216)||(16225045-16225146)
chr8 (167-220)||(14018029-14018082)
chr8 (111-220)||(25250544-25250655)
chr8 (111-181)||(26102578-26102648)
chr8 (172-218)||(43942348-43942394)
chr8 (111-144)||(27468096-27468129)
chr8 (172-220)||(17250942-17250990)
chr8 (130-220)||(20869523-20869609)
[»] chr1 (54 HSPs)
chr1 (112-220)||(23768325-23768433)
chr1 (111-220)||(46247957-46248066)
chr1 (117-220)||(23796510-23796613)
chr1 (111-203)||(4349700-4349792)
chr1 (111-220)||(10668270-10668381)
chr1 (111-220)||(20004094-20004205)
chr1 (111-213)||(1517315-1517418)
chr1 (117-220)||(14617083-14617186)
chr1 (111-220)||(34725102-34725209)
chr1 (111-220)||(18944688-18944800)
chr1 (111-220)||(27474326-27474434)
chr1 (111-219)||(35253191-35253297)
chr1 (111-220)||(46991849-46991958)
chr1 (100-219)||(38478275-38478392)
chr1 (121-220)||(27201692-27201793)
chr1 (111-218)||(35005170-35005279)
chr1 (118-220)||(30395737-30395841)
chr1 (119-220)||(32632569-32632669)
chr1 (117-200)||(10378745-10378828)
chr1 (111-186)||(45402175-45402250)
chr1 (114-220)||(47214556-47214660)
chr1 (118-220)||(6925145-6925247)
chr1 (120-227)||(12126850-12126955)
chr1 (117-202)||(18741967-18742054)
chr1 (116-227)||(27136660-27136772)
chr1 (117-220)||(9939506-9939612)
chr1 (121-219)||(17470361-17470458)
chr1 (117-220)||(44485120-44485222)
chr1 (111-213)||(8197095-8197197)
chr1 (119-220)||(45264411-45264513)
chr1 (127-220)||(18724565-18724658)
chr1 (111-220)||(31382218-31382326)
chr1 (111-201)||(42304211-42304303)
chr1 (119-218)||(19701617-19701717)
chr1 (129-220)||(25468285-25468376)
chr1 (153-220)||(41319852-41319919)
chr1 (117-199)||(43768205-43768287)
chr1 (111-193)||(45812541-45812623)
chr1 (111-200)||(19414502-19414591)
chr1 (117-214)||(20999860-20999957)
chr1 (127-219)||(11596559-11596650)
chr1 (107-218)||(35019277-35019387)
chr1 (117-220)||(6983821-6983922)
chr1 (117-220)||(39214968-39215072)
chr1 (118-193)||(15505636-15505710)
chr1 (117-220)||(15511158-15511264)
chr1 (153-220)||(34149006-34149073)
chr1 (117-220)||(35117775-35117881)
chr1 (117-202)||(46859129-46859215)
chr1 (178-219)||(25027989-25028030)
chr1 (120-161)||(33594144-33594185)
chr1 (172-220)||(19656171-19656219)
chr1 (172-208)||(19932820-19932856)
chr1 (172-220)||(22324938-22324985)
[»] chr3 (59 HSPs)
chr3 (111-220)||(54484734-54484844)
chr3 (111-220)||(40272816-40272925)
chr3 (111-220)||(12914039-12914148)
chr3 (111-220)||(22609810-22609918)
chr3 (118-218)||(6411833-6411932)
chr3 (111-220)||(13628794-13628905)
chr3 (117-220)||(45948848-45948951)
chr3 (117-220)||(14987001-14987106)
chr3 (111-220)||(25517174-25517284)
chr3 (120-220)||(34420656-34420757)
chr3 (111-219)||(39203561-39203667)
chr3 (111-220)||(46421038-46421150)
chr3 (111-220)||(29366724-29366835)
chr3 (100-220)||(49013466-49013588)
chr3 (111-218)||(45786218-45786327)
chr3 (111-220)||(7943034-7943143)
chr3 (119-220)||(26573171-26573272)
chr3 (111-220)||(26869751-26869859)
chr3 (111-220)||(13730606-13730717)
chr3 (106-220)||(31592893-31593005)
chr3 (111-220)||(516453-516565)
chr3 (111-220)||(1217134-1217241)
chr3 (119-220)||(31904868-31904970)
chr3 (119-220)||(10795435-10795538)
chr3 (117-220)||(53996575-53996679)
chr3 (117-220)||(19731046-19731149)
chr3 (117-200)||(34771374-34771457)
chr3 (111-220)||(22122921-22123028)
chr3 (117-218)||(55401222-55401324)
chr3 (126-220)||(8247706-8247802)
chr3 (126-215)||(9276313-9276401)
chr3 (111-200)||(15797284-15797373)
chr3 (111-192)||(52926223-52926304)
chr3 (111-219)||(16735486-16735593)
chr3 (119-214)||(33235581-33235676)
chr3 (117-220)||(52428480-52428590)
chr3 (111-203)||(353353-353447)
chr3 (117-220)||(19751622-19751725)
chr3 (119-220)||(31672737-31672839)
chr3 (119-220)||(54374357-54374459)
chr3 (153-218)||(47624088-47624152)
chr3 (111-220)||(5173723-5173833)
chr3 (172-227)||(45620893-45620949)
chr3 (102-214)||(4495671-4495771)
chr3 (124-220)||(9607247-9607345)
chr3 (166-220)||(21875057-21875112)
chr3 (117-214)||(44403565-44403663)
chr3 (117-220)||(45139488-45139591)
chr3 (101-182)||(24577917-24577998)
chr3 (127-220)||(30928167-30928260)
chr3 (172-220)||(54032624-54032672)
chr3 (117-219)||(829452-829555)
chr3 (111-170)||(24851305-24851364)
chr3 (119-220)||(25944513-25944615)
chr3 (119-157)||(31922851-31922889)
chr3 (111-144)||(10484620-10484653)
chr3 (111-144)||(40390361-40390394)
chr3 (111-144)||(47624219-47624252)
chr3 (111-144)||(54032575-54032608)
[»] chr4 (60 HSPs)
chr4 (111-220)||(20639662-20639772)
chr4 (111-220)||(40915851-40915959)
chr4 (111-218)||(51865042-51865149)
chr4 (111-220)||(5648281-5648389)
chr4 (111-220)||(6430630-6430738)
chr4 (111-220)||(30639402-30639510)
chr4 (123-219)||(14983857-14983953)
chr4 (126-220)||(17043413-17043507)
chr4 (111-220)||(25629071-25629180)
chr4 (111-220)||(47443979-47444088)
chr4 (116-220)||(19027870-19027974)
chr4 (111-220)||(21646986-21647097)
chr4 (111-216)||(23501813-23501920)
chr4 (106-220)||(20225006-20225118)
chr4 (117-220)||(35567192-35567295)
chr4 (111-220)||(48598829-48598936)
chr4 (111-200)||(29207902-29207991)
chr4 (111-220)||(16408605-16408716)
chr4 (119-203)||(30690188-30690272)
chr4 (117-220)||(9987844-9987947)
chr4 (111-214)||(13256403-13256508)
chr4 (111-218)||(44363134-44363243)
chr4 (111-220)||(47528534-47528641)
chr4 (117-199)||(55766476-55766558)
chr4 (111-219)||(10277761-10277867)
chr4 (120-220)||(20908649-20908750)
chr4 (120-193)||(41018807-41018880)
chr4 (111-218)||(9832317-9832422)
chr4 (128-220)||(49796820-49796911)
chr4 (119-202)||(12711461-12711544)
chr4 (111-219)||(16911585-16911695)
chr4 (119-227)||(25343202-25343312)
chr4 (117-218)||(54175088-54175190)
chr4 (111-220)||(7909284-7909393)
chr4 (118-192)||(30352591-30352667)
chr4 (168-220)||(487196-487248)
chr4 (111-220)||(5306664-5306776)
chr4 (172-220)||(39029126-39029174)
chr4 (119-199)||(55830733-55830813)
chr4 (121-220)||(37494873-37494972)
chr4 (121-219)||(20405109-20405210)
chr4 (111-220)||(39077800-39077907)
chr4 (111-200)||(11054152-11054241)
chr4 (111-193)||(20225123-20225207)
chr4 (120-220)||(21489109-21489210)
chr4 (127-220)||(25463144-25463237)
chr4 (111-146)||(48033422-48033457)
chr4 (111-145)||(19425922-19425956)
chr4 (117-159)||(34256992-34257034)
chr4 (111-161)||(38755912-38755962)
chr4 (111-161)||(40553941-40553991)
chr4 (126-220)||(10660426-10660521)
chr4 (126-220)||(10874571-10874666)
chr4 (111-144)||(11394950-11394983)
chr4 (111-144)||(11404677-11404710)
chr4 (117-170)||(28494223-28494276)
chr4 (111-144)||(35532090-35532123)
chr4 (105-144)||(2813225-2813265)
chr4 (111-219)||(47441534-47441642)
chr4 (172-220)||(51420596-51420644)
[»] chr7 (48 HSPs)
chr7 (111-220)||(7879660-7879769)
chr7 (117-220)||(2541029-2541132)
chr7 (121-227)||(23419688-23419794)
chr7 (111-220)||(42798691-42798800)
chr7 (117-220)||(38604549-38604652)
chr7 (111-220)||(21172013-21172120)
chr7 (117-219)||(28362156-28362257)
chr7 (111-220)||(1408479-1408588)
chr7 (111-220)||(11617592-11617701)
chr7 (111-220)||(42805546-42805657)
chr7 (111-220)||(47716481-47716592)
chr7 (111-220)||(31591113-31591220)
chr7 (111-220)||(32758283-32758390)
chr7 (111-217)||(35787273-35787378)
chr7 (111-220)||(42391104-42391211)
chr7 (111-220)||(48735126-48735233)
chr7 (111-220)||(19426894-19427002)
chr7 (111-220)||(27629656-27629765)
chr7 (119-220)||(33871922-33872022)
chr7 (118-219)||(40463900-40464000)
chr7 (111-220)||(10693077-10693184)
chr7 (111-220)||(34626212-34626320)
chr7 (111-220)||(38262200-38262309)
chr7 (119-227)||(42476888-42476994)
chr7 (111-220)||(43557494-43557606)
chr7 (121-212)||(8148960-8149051)
chr7 (117-220)||(18747508-18747612)
chr7 (114-220)||(2662943-2663046)
chr7 (128-203)||(19266489-19266564)
chr7 (111-190)||(27889320-27889399)
chr7 (111-193)||(18512457-18512539)
chr7 (118-220)||(23231579-23231681)
chr7 (117-203)||(35334826-35334912)
chr7 (172-220)||(46354216-46354264)
chr7 (172-219)||(16341301-16341348)
chr7 (111-193)||(11741842-11741924)
chr7 (111-185)||(47077859-47077933)
chr7 (117-193)||(19265863-19265938)
chr7 (117-220)||(21566457-21566561)
chr7 (153-220)||(14099052-14099119)
chr7 (153-220)||(14409069-14409136)
chr7 (111-182)||(23618981-23619052)
chr7 (112-202)||(25198766-25198856)
chr7 (154-220)||(48123531-48123597)
chr7 (132-220)||(7644978-7645066)
chr7 (111-144)||(36602545-36602578)
chr7 (153-201)||(15108443-15108491)
chr7 (172-220)||(22699035-22699083)
[»] chr5 (35 HSPs)
chr5 (117-217)||(16880657-16880757)
chr5 (111-220)||(38879603-38879714)
chr5 (111-220)||(24448912-24449021)
chr5 (119-218)||(7097772-7097870)
chr5 (111-220)||(32703446-32703553)
chr5 (111-220)||(41014341-41014449)
chr5 (111-220)||(20135626-20135737)
chr5 (111-220)||(27328774-27328885)
chr5 (117-220)||(29334417-29334521)
chr5 (117-220)||(43574628-43574731)
chr5 (111-220)||(4619108-4619219)
chr5 (111-220)||(13801771-13801882)
chr5 (120-220)||(19142956-19143055)
chr5 (111-220)||(7368420-7368527)
chr5 (111-220)||(8169988-8170095)
chr5 (111-220)||(35710335-35710442)
chr5 (130-219)||(2838802-2838890)
chr5 (111-220)||(43334224-43334335)
chr5 (111-182)||(16957374-16957445)
chr5 (111-193)||(34154818-34154900)
chr5 (118-220)||(12006339-12006443)
chr5 (127-208)||(22600488-22600569)
chr5 (127-227)||(24323725-24323825)
chr5 (127-227)||(24360349-24360449)
chr5 (106-161)||(25622541-25622596)
chr5 (114-200)||(9794385-9794471)
chr5 (121-220)||(22187307-22187408)
chr5 (123-220)||(28516449-28516547)
chr5 (107-161)||(39801597-39801651)
chr5 (148-227)||(41425963-41426042)
chr5 (111-157)||(29184065-29184111)
chr5 (117-202)||(3771379-3771464)
chr5 (119-191)||(12477132-12477205)
chr5 (184-220)||(22025565-22025601)
chr5 (167-219)||(34074622-34074674)
[»] scaffold0258 (1 HSPs)
scaffold0258 (111-220)||(13028-13136)
[»] scaffold0057 (3 HSPs)
scaffold0057 (111-220)||(46853-46962)
scaffold0057 (121-217)||(24786-24882)
scaffold0057 (120-227)||(43674-43780)
[»] scaffold0049 (1 HSPs)
scaffold0049 (111-220)||(58999-59110)
[»] scaffold0311 (1 HSPs)
scaffold0311 (120-218)||(10834-10932)
[»] scaffold0015 (1 HSPs)
scaffold0015 (111-220)||(48638-48745)
[»] scaffold0180 (1 HSPs)
scaffold0180 (111-193)||(24137-24219)
[»] scaffold0168 (1 HSPs)
scaffold0168 (111-220)||(30601-30708)
[»] scaffold0018 (1 HSPs)
scaffold0018 (106-211)||(72866-72971)
[»] scaffold0954 (1 HSPs)
scaffold0954 (118-220)||(3566-3668)
[»] scaffold0223 (1 HSPs)
scaffold0223 (119-220)||(11153-11252)
[»] scaffold0187 (2 HSPs)
scaffold0187 (111-220)||(10054-10161)
scaffold0187 (111-220)||(20382-20489)
[»] scaffold0167 (1 HSPs)
scaffold0167 (127-218)||(23623-23714)
[»] scaffold1176 (1 HSPs)
scaffold1176 (119-200)||(1599-1680)
[»] scaffold0036 (1 HSPs)
scaffold0036 (138-200)||(35048-35110)


Alignment Details
Target: chr6 (Bit Score: 159; Significance: 9e-85; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 13628166 - 13628388
Alignment:
Q  17 aatatcaggagaagtagaaacgtatgataacagtaaaggaaattaaagtggtggttattgtgaggtacaaaaatgcaatgcagtattaacaaatggcaat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  13628166 aatatcaggagaagtagaaacgtatgataacagtaaaggaaattaaagtggtggttattgtgaggtacaaaaatgcaatgtagtattaacaaagggcaat 13628265  T
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaagaggctg 215  Q
    || |||||||||| ||||||||||||||   |||  ||||||||||  |||||||||||||||||||||   |||||||| |||||||||||||||||||    
T  13628266 ccagtgcactaaaactcccgcatacgcagagtctaggaaggggtcttgctatttagtgtattgtacgcaattttaccttgtttttttaaacaagaggctg 13628365  T
Q  216 tttccggaactttagtcaatctt 238  Q
    |||||||||||||||||||||||    
T  13628366 tttccggaactttagtcaatctt 13628388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 29355859 - 29355970
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||| ||| ||||    
T  29355859 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaa 29355958  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  29355959 gaggctgtttcc 29355970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 12221918 - 12222030
Alignment:
Q  111 ggcaatccggtgcactaaa-gctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaaca 207  Q
    ||||| ||||||||||||| ||||||||||||||| | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| |||    
T  12221918 ggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacaca 12222017  T
Q  208 agaggctgtttcc 220  Q
    |||||||||||||    
T  12222018 agaggctgtttcc 12222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 1354761 - 1354868
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  1354761 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 1354858  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  1354859 ggctgtttcc 1354868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 1347093 - 1346986
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| |||||     
T  1347093 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagt 1346996  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  1346995 ggctgtttcc 1346986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 1941979 - 1941879
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    |||||||| ||| ||||||||||| |||||||   || |||||| ||| |||  |||||||||||||||||||||| ||||||||| |||||||| ||||    
T  1941979 cggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtt 1941880  T
Q  218 t 218  Q
    |    
T  1941879 t 1941879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 26097289 - 26097182
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| |   |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  26097289 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctg--ttttacacaaga 26097192  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  26097191 ggctgtttcc 26097182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 383764 - 383837
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgc 184  Q
    ||||| |||||| ||| ||||||||||||||||| | |||||||||||||| ||| |||| |||||||||||||    
T  383764 ggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 7947384 - 7947485
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||||| |||||||||| || | ||||||| | ||| |||| | ||||||||||||||||||||| || |||||| ||| |||| |||||    
T  7947384 gtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgttt 7947483  T
Q  219 cc 220  Q
    ||    
T  7947484 cc 7947485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 9161247 - 9161145
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactat--ttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||| ||||||||||| | || ||||||||||| ||| ||  ||  ||||||||||||||||||||  || |||||| ||||||||||||    
T  9161247 ggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctg-tttttacacaagaggctgt 9161149  T
Q  217 ttcc 220  Q
    ||||    
T  9161148 ttcc 9161145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 3116133 - 3116192
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattt 170  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||||||| ||| ||||    
T  3116133 ggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccattt 3116192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 25557854 - 25557747
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||  |   |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  25557854 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctg--ttttacacaaga 25557757  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  25557756 ggctgtttcc 25557747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 32579543 - 32579448
Alignment:
Q  124 actaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||||||||| ||| | |||| ||||||||| ||| |||| | ||||||||||||| |||||| |  |||||| || |||||||||||||    
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgt-atttttataccagaggctgtttcc 32579448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 6024303 - 6024256
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    ||||||||||||||| |||||| ||||||||| |||||||||||||||    
T  6024303 gtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttc 6024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 18277203 - 18277306
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||| ||||||||||||||||| |   |||  ||||||||| ||| |||| ||||  ||||| || ||||||| || |||||| ||||||||||||    
T  18277203 ccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggctgt 18277302  T
Q  217 ttcc 220  Q
    ||||    
T  18277303 ttcc 18277306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 23930138 - 23930238
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    ||||||||||||||||||||||| ||| | || | ||||||||| ||| || | |||||||||||||| |  || ||||||||||| ||| ||| |||||    
T  23930138 cggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgcaac--tatcttgttttttacacatgagactgtt 23930235  T
Q  218 tcc 220  Q
    |||    
T  23930236 tcc 23930238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 8409311 - 8409265
Alignment:
Q  174 gtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttcc 8409265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 12886044 - 12885967
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgcag 186  Q
    ||||| ||||||||||||||||||| |||||||| | |||| ||||||||| |||  | ||| |||||||||||||||    
T  12886044 ggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 33138957 - 33138855
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    ||||||||||||||| | |||||| || | || |  || ||||| ||| |||| ||||||||||||| |||||||  ||||||||| |||||||| ||||    
T  33138957 cggtgcactaaagctactgcatacacagggtccggaaaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtt 33138858  T
Q  218 tcc 220  Q
    |||    
T  33138857 tcc 33138855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 17432479 - 17432395
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgcagccttacc 193  Q
    ||||| ||||||||||||||||||||||| | || |||| | |||  ||||||||  | ||||||||||||||| ||||||||||    
T  17432479 ggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacc 17432395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 23240837 - 23240935
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    |||||||||||||||||||||||||   ||  |||||||||| ||| | || || |||||||||||  |||||| ||  ||||| |||||||||||||||    
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctg--ttttacacaagaggctgtttc 23240934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 32728169 - 32728269
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||| ||||||||||| | | |||| ||| ||| | |||||||| || |||||||| ||| |||||| ||||||||| | |||||| |||||    
T  32728169 ggtgcactaaagttcccgcatacgtagggtctgggaaagggac-cactatttggtatattgtacacagtcttaccctgttttttacataagaggttgttt 32728267  T
Q  219 cc 220  Q
    ||    
T  32728268 cc 32728269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 209
Target Start/End: Original strand, 24751068 - 24751176
Alignment:
Q  107 aaatggcaatccggtgcactaaagctcc-----cgcatacgcaagatctgagaaggggtctcactattt-agtgtattgtacgcagccttaccttgtttt 200  Q
    ||||||||| |||||||||||||||| |     |||||||||| | |  | ||||||||||||| |||| |||||||||||||||| |||||| | ||||    
T  24751068 aaatggcaacccggtgcactaaagctgctcatacgcatacgcacggttcgtgaaggggtctcaccattttagtgtattgtacgcagtcttaccctatttt 24751167  T
Q  201 ttaaacaag 209  Q
    ||| |||||    
T  24751168 ttacacaag 24751176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 3815087 - 3815190
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||| ||||||||| | | |  | ||| ||||| ||| |||| ||||||||||||||| | |||| | ||||||| |||| || ||||    
T  3815087 ccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgt 3815186  T
Q  217 ttcc 220  Q
    ||||    
T  3815187 ttcc 3815190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 12228447 - 12228380
Alignment:
Q  153 gaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||| |||||| | |||||||||||||| | ||| | | ||||||||||||||| ||||||||    
T  12228447 gaaggggtcccactatctggtgtattgtacgcaactttatcctattttttaaacaagagtctgtttcc 12228380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 20400744 - 20400689
Alignment:
Q  165 ctatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||| ||||||||| |||||| ||||||||| |||||||  |||||||    
T  20400744 ctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttcc 20400689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 24097696 - 24097608
Alignment:
Q  123 cactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    |||||||||| ||||||||||| | || | ||||||||| ||| |||| ||    |||| ||||||||||| ||||||||| |||||||||||    
T  24097696 cactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggt----tgtaagcagccttaccctgttttttatacaagaggctg 24097608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 15866052 - 15866150
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    |||||||| || ||||||| ||||| | || | ||||||||| ||| |||| |||||||  ||||||| ||||| |||||||||   |||||||||||||    
T  15866052 gtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttc 15866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 30786378 - 30786411
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  30786378 ggcaacccggtgcactaaagctcccgcatacgca 30786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 11395886 - 11395842
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtc 161  Q
    |||||| ||||||||||||||||||||| |||| | |||||||||    
T  11395886 ccggtggactaaagctcccgcatacgcaggatccgggaaggggtc 11395842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 13267856 - 13267788
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattg 179  Q
    ||||| |||||||||| ||||||||||||||||| | ||   ||||||||| ||| |||| ||||||||    
T  13267856 ggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 11514566 - 11514458
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    |||||||||||||||||||||||||||||||||| | |||| |||||| || ||| |||| ||||||||||||||||||||| |||||||||| ||||||    
T  11514566 ggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttactttgttttttacacaaga 11514468  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  11514467 ggctgtttcc 11514458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 8455320 - 8455429
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||| ||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||| ||||| ||||||    
T  8455320 ggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaaga 8455419  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  8455420 ggctgtttcc 8455429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 9671310 - 9671203
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  9671310 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 9671213  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  9671212 ggctgtttcc 9671203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 10546294 - 10546184
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaag 209  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| || ||||||| |||||    
T  10546294 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatacaag 10546195  T
Q  210 aggctgtttcc 220  Q
    ||| |||||||    
T  10546194 aggatgtttcc 10546184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 10543836 - 10543720
Alignment:
Q  106 caaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgtttttta 203  Q
    |||| ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| ||||   |||||||||||||||||||||| |||||||||    
T  10543836 caaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttta 10543737  T
Q  204 aacaagaggctgtttcc 220  Q
     ||||||||| ||||||    
T  10543736 cacaagaggccgtttcc 10543720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 14530451 - 14530340
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||  | |||||||||||| ||||||||| ||||||||| ||||    
T  14530451 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaa 14530352  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  14530351 gaggctgtttcc 14530340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 36871622 - 36871515
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| || |||| | ||||||    
T  36871622 ggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttcacacaaga 36871525  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  36871524 ggctgtttcc 36871515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 221
Target Start/End: Original strand, 32781308 - 32781402
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttccg 221  Q
    ||||||||||||||| || | |||| ||||||||| ||| |||| ||||||||||||||| |||||| ||||||||| |||||||| ||||||||    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccg 32781402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 40762233 - 40762347
Alignment:
Q  106 caaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaa 205  Q
    |||| ||||| ||||||||||||||||||| |||||||| | ||   ||| ||||| ||| |||| |||||||||||| |||||||||  |||||||| |    
T  40762233 caaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttaca 40762332  T
Q  206 caagaggctgtttcc 220  Q
    |||||||||||||||    
T  40762333 caagaggctgtttcc 40762347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 99281 - 99375
Alignment:
Q  123 cactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    ||||||||||||||||||| || | |||||||||||||  ||| |||| ||||||||||||||||||| || ||||||||  |||||||||||||||    
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgtttttt--acaagaggctgtttc 99375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 14444851 - 14444751
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||||||||||||||| | || | ||||||||| ||| |||| |||||| |||| |||||||||| || |||||| ||||||||||||||    
T  14444851 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctg-tttttacacaagaggctgttt 14444753  T
Q  219 cc 220  Q
    ||    
T  14444752 cc 14444751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 25079714 - 25079830
Alignment:
Q  104 aacaaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-tttttt 202  Q
    |||||| ||||| |||||||||||||||||  ||||||||| | || | ||||||||| ||| |||  |||||||||||||| |||||||||| ||||||    
T  25079714 aacaaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgttttttt 25079813  T
Q  203 aaacaagaggctgtttc 219  Q
    | |||||||| ||||||    
T  25079814 acacaagaggttgtttc 25079830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 227
Target Start/End: Original strand, 19977707 - 19977834
Alignment:
Q  100 tattaacaaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttt 199  Q
    |||||| ||| || |||| ||||||||||||||||||||||| |||| |  | |||||| || ||| |||| |||||||||||||| ||||| | | |||    
T  19977707 tattaaaaaagggtaatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattt 19977806  T
Q  200 tttaaacaagaggctgtttccggaactt 227  Q
    |||| | |||||||||||||| ||||||    
T  19977807 tttacaaaagaggctgtttccagaactt 19977834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 24859992 - 24860070
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagcct 189  Q
    |||||||||||||||||||||||||||||||||| | || ||||||||||   || |||| ||||||||||||||||||    
T  24859992 ggcaatccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcagcct 24860070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 17668133 - 17668032
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||||  ||||||| | |  ||||||||||  ||| |||| |||||||||||||||||||||| || |||||| ||||||    
T  17668133 ggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaaga 17668034  T
Q  211 gg 212  Q
    ||    
T  17668033 gg 17668032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 17623695 - 17623587
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| || ||||||||||||| || |||||||| |||  | ||||||||  ||| |||| |||||||||||||||||||||| || |||||| ||||||    
T  17623695 ggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaaga 17623596  T
Q  211 ggctgtttc 219  Q
    || ||||||    
T  17623595 ggttgtttc 17623587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 24200627 - 24200738
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| ||||||||||||||||| | ||||| || | || | |||||| || ||| ||||   |||||||||||||||||||||| ||||||||| ||||    
T  24200627 ggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa 24200726  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  24200727 gaggctgtttcc 24200738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 17896381 - 17896282
Alignment:
Q  121 tgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagcctta-ccttgttttttaaacaagaggctgtttc 219  Q
    ||||||||||||||| |||||||| | || ||||||||||| ||| |||| || ||||||||||||||||| |||  ||||||| |||||||| ||||||    
T  17896381 tgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttc 17896282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 4516361 - 4516463
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||| |||||||||| || |||||||| | || | ||||||||| ||| | || |||||||||||||||| || || ||||||||| ||||||||||||    
T  4516361 ccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctgt 4516460  T
Q  217 ttc 219  Q
    |||    
T  4516461 ttc 4516463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 21779265 - 21779368
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||| ||||||| ||  ||||| ||||||    
T  21779265 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacacaaga 21779362  T
Q  211 ggctgt 216  Q
    ||||||    
T  21779363 ggctgt 21779368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 23397895 - 23397788
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| | | | || ||||||||||| ||| |||| |||||||||||| |||||||||   | ||||| ||||||    
T  23397895 ggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttacc--ctattttacacaaga 23397798  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  23397797 ggctgtttcc 23397788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 24890533 - 24890451
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttt 202  Q
    ||||||||||||||| ||||||||| | || | ||||||||| ||| | || |||||||||| ||||||||||||||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttttt 24890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 25249742 - 25249850
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||||||||| |||||||||| | |  | |||||| || ||| |||| |||||||||||||||||||||| || ||| || ||||||    
T  25249742 ggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctg-tttgtacacaaga 25249840  T
Q  211 ggctgtttcc 220  Q
    | ||||||||    
T  25249841 gactgtttcc 25249850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 25632645 - 25632548
Alignment:
Q  106 caaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttta 203  Q
    |||| ||||| |||||||||||||||||||||||||| ||| |  | |||||  || ||| |||| |||||||||||||||||||| | |||||||||    
T  25632645 caaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgtttttta 25632548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 26684626 - 26684715
Alignment:
Q  113 caatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttt 202  Q
    |||||||||||| ||||||||||||||||||| | |  | |||| |||| ||| ||||||| ||||||||||||||||||| | ||||||    
T  26684626 caatccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttt 26684715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 44643648 - 44643563
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttt 202  Q
    |||||||||||| ||||||||||||||| | |||| ||||||||| ||| |||| ||  |||||||||||||||||  ||||||||    
T  44643648 ccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttt 44643563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 7214659 - 7214556
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||||||||| ||| ||||||||||   || |||||||| |||||| ||||   |||||||||||||||||||||| ||| ||||| ||||||| ||||    
T  7214659 ggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaagagactgt 7214560  T
Q  217 ttcc 220  Q
    ||||    
T  7214559 ttcc 7214556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 12023929 - 12024031
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||| ||||||| ||  ||||||| | || | || |||||| ||| |||| |||||||||||||||||||||| || |||||| ||||||||||||    
T  12023929 ccggtgcattaaagcttccaaatacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgt 12024027  T
Q  217 ttcc 220  Q
    ||||    
T  12024028 ttcc 12024031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 25641630 - 25641543
Alignment:
Q  113 caatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    ||||||||| ||||||||||| |||||||||| |||  | ||||||||| ||| |||| |||||||||||||| | ||||| ||||||    
T  25641630 caatccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgtttt 25641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 30826164 - 30826059
Alignment:
Q  113 caatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagagg 212  Q
    ||||| |||||||||||||||||||||| | | | |||| |||||| || ||| |||| |||||||||||||| ||||||| |  |||||| ||||||||    
T  30826164 caatctggtgcactaaagctcccgcatatgtagggtctgggaagggttc-caccatttggtgtattgtacgcaaccttaccct-atttttacacaagagg 30826067  T
Q  213 ctgtttcc 220  Q
    ||||||||    
T  30826066 ctgtttcc 30826059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 15296421 - 15296527
Alignment:
Q  122 gcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||| |||||| || |||||||| | || |||||||| || |||||||| | | ||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  15296421 gcaccaaagcttccacatacgcagggtccgagaagggatcccactattttggtatattgtacgcagccttaccctgtattttacacaacaggctgtttcc 15296520  T
Q  221 ggaactt 227  Q
    || ||||    
T  15296521 gggactt 15296527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 39914310 - 39914419
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaag 209  Q
    ||||| ||| |||||||||||||||||||||||| | || | ||||||||| ||| |||  ||||||||||| || ||||||| || ||||||| |||||    
T  39914310 ggcaacccgatgcactaaagctcccgcatacgcagggtcag-gaaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaag 39914408  T
Q  210 aggctgtttcc 220  Q
    ||| |||||||    
T  39914409 aggttgtttcc 39914419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 31158445 - 31158552
Alignment:
Q  113 caatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||| ||||||||||||||||||||| | |||| ||||||||| |||  | ||| || ||||||| |||  |||||| |||||||||  |||||    
T  31158445 caatcaggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaaga 31158544  T
Q  211 ggctgttt 218  Q
    ||||||||    
T  31158545 ggctgttt 31158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 39499236 - 39499316
Alignment:
Q  113 caatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    ||||| |||||||||||||||||||||||||| |||  || ||||| || ||| ||||  ||||||||||||||| |||||    
T  39499236 caatctggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagctttacc 39499316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 19615116 - 19615015
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||| ||||||||| | |  | ||||||||| |||||||  | || |||||||||||| |||||| ||||||||| |||||||| |||    
T  19615116 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtc-cactattattggtatattgtacgcagtcttaccctgttttttatacaagaggatgt 19615018  T
Q  217 ttc 219  Q
    |||    
T  19615017 ttc 19615015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 13245111 - 13245181
Alignment:
Q  123 cactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    |||||||||||||| ||| ||| | || | ||||||||| ||| |||||||||| ||||||||||||||||    
T  13245111 cactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc 13245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 44521392 - 44521486
Alignment:
Q  126 taaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||| ||| ||||  |||| |||||| || | | |||| ||||||| || ||||||||||||||||||||| |||||||  |||||||    
T  44521392 taaagctcccgtatatgcaatgtctgggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttcc 44521486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 12315656 - 12315749
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaa 204  Q
    ||||||||| | ||||||| ||| |||||||| |   |||  ||||| |||||||||||| ||||||||||| ||| |||||| ||||||||||    
T  12315656 ggcaatccgatacactaaaactctcgcatacgtatagtctaggaaggagtctcactatttggtgtattgtacacagtcttaccctgttttttaa 12315749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 17471676 - 17471571
Alignment:
Q  116 tccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctca-ctatttagtgtattgtacgcagcctta-ccttgttttttaaacaagaggc 213  Q
    |||||||||||||| |||||||||| ||| | || | |||||||||||| |  ||| || |||||||||||| |||| |||  ||||||| |||||||||    
T  17471676 tccggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggc 17471577  T
Q  214 tgtttc 219  Q
    ||||||    
T  17471576 tgtttc 17471571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 22371143 - 22371079
Alignment:
Q  153 gaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||| ||| |||| |||||||||||||||||||||| |||||||   ||| ||||||||||||    
T  22371143 gaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt---acacgaggctgtttcc 22371079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 33795400 - 33795300
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgta-ttgtacgcagccttaccttgttttttaaacaagaggctgtttccggaac 225  Q
    ||||||||||||||| || | |||| ||||||||| ||| | |  ||||| ||||||||||||||||| |||||||||  ||||||| ||||||||| ||    
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccacca-taggtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggac 33795302  T
Q  226 tt 227  Q
    ||    
T  33795301 tt 33795300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 40416875 - 40416984
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||||||||| |||||| ||| | ||  | || ||||| ||  | || ||||||||||| ||||||| || ||||||||| ||||||    
T  40416875 ggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttatacaaga 40416974  T
Q  211 ggctgtttcc 220  Q
    || |||||||    
T  40416975 ggttgtttcc 40416984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 5450375 - 5450307
Alignment:
Q  153 gaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaagaggctgtttcc 220  Q
    ||||||||| |||  ||| |||||||||||||||||||||| || ||||||| |||||||| |||||||    
T  5450375 gaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttcc 5450307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 124913 - 124951
Alignment:
Q  106 caaatggcaatccggtgcactaaagctcccgcatacgca 144  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  124913 caaaaggcaacccggtgcactaaagctcccgcatacgca 124951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 23145763 - 23145809
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||||||||||  ||||||||| ||||||| ||||||    
T  23145763 gtgtattgtacgcagccttacactgttttttacacaagagtctgttt 23145809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 23557553 - 23557599
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||||||||||  ||||||||| ||||||| ||||||    
T  23557553 gtgtattgtacgcagccttacactgttttttacacaagagtctgttt 23557599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 27573751 - 27573646
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||| ||||||||||||||| ||||| || | | || |||  |||  ||| |||| |||||||||||||||||||||| || ||| || ||||||    
T  27573751 ggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatg-tttatacacaaga 27573653  T
Q  211 ggctgtt 217  Q
    |||||||    
T  27573652 ggctgtt 27573646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 30864424 - 30864529
Alignment:
Q  114 aatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggc 213  Q
    ||||||||||||  ||||| ||||||||||| | | || ||| || ||| || |||| || ||||||||||| ||||||| |  |||||| |||||||||    
T  30864424 aatccggtgcaccgaagcttccgcatacgcagggtttgggaaaggatcttaccatttggtatattgtacgcacccttaccct-atttttacacaagaggc 30864522  T
Q  214 tgtttcc 220  Q
    |||||||    
T  30864523 tgtttcc 30864529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 22371243 - 22371210
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  22371243 ggcaacccggtgcactaaagctcccgcatacgca 22371210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 44449395 - 44449495
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    |||||| |||| ||||| || ||||| | || | ||||||||| |||||||| | ||||||||||||||||||| | ||||||| |  ||||||| ||||    
T  44449395 ggtgcattaaaactcccacaaacgcagggtccgggaaggggtcccactattttggtgtattgtacgcagccttatcctgtttttcattcaagaggttgtt 44449494  T
Q  218 t 218  Q
    |    
T  44449495 t 44449495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 29521690 - 29521798
Alignment:
Q  112 gcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagag 211  Q
    |||| |||||||||||||||||||||||||||| | |||| || ||| || ||| |||| |||||||||||||||||||||| |||||||||||||||||    
T  29521690 gcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagag 29521789  T
Q  212 gctgtttcc 220  Q
    |||||||||    
T  29521790 gctgtttcc 29521798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 45071395 - 45071280
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||| ||||||||||||||||||| || | ||||||||| ||| |||| |||||||||||||||||||||| || |||||| ||||||    
T  45071395 ggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaaga 45071297  T
Q  211 ggctgtttccggaactt 227  Q
    |||||||||| ||||||    
T  45071296 ggctgtttccagaactt 45071280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 28817630 - 28817739
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||| |||||||||||||||||||||||| | || | ||||||||| ||| |||  |||||||||||||||||||||| ||||||||| ||||||    
T  28817630 ggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacacaaga 28817729  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  28817730 ggctgtttcc 28817739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 36720919 - 36720818
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||| ||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  36720919 ggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 36720820  T
Q  219 cc 220  Q
    ||    
T  36720819 cc 36720818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 39460998 - 39461109
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||||||| |||  | |||||||||||||||||||||  ||||||||| ||||    
T  39460998 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacacaa 39461097  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  39461098 gaggctgtttcc 39461109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 44530274 - 44530171
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||||||||||||||| | ||   ||||||||| ||| |||| |||||||||||||||||||||| ||||||||| |||||||| |||    
T  44530274 ccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgt 44530175  T
Q  217 ttcc 220  Q
    ||||    
T  44530174 ttcc 44530171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 35261819 - 35261701
Alignment:
Q  102 ttaacaaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttt 201  Q
    |||| ||| ||||| |||||||||||||||||||||||||||| | ||   ||||||||| ||| |||| |||||||||||||| ||||||| |||||||    
T  35261819 ttaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttt 35261720  T
Q  202 taaacaagaggctgtttcc 220  Q
    || ||||||| ||||||||    
T  35261719 tacacaagagactgtttcc 35261701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 29877217 - 29877116
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||| ||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||||||||| |||| |||||||||    
T  29877217 ggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgttt 29877118  T
Q  219 cc 220  Q
    ||    
T  29877117 cc 29877116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 6760955 - 6760844
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||| ||  | || ||||||||||| ||| |||  | |||||||||||| ||||||||| ||||||||| ||||    
T  6760955 ggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaa 6760856  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  6760855 gaggctgtttcc 6760844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 13160832 - 13160725
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||| ||||| ||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| || |||||| ||||||    
T  13160832 ggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaaga 13160734  T
Q  211 ggctgtttc 219  Q
    |||||||||    
T  13160733 ggctgtttc 13160725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 8483948 - 8484051
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||||| |||||||||||||||||||| | |||| || |||||| ||| | || ||||||||||||||||||| || ||||||||| |||||||| |||    
T  8483948 ccggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgt 8484047  T
Q  217 ttcc 220  Q
    ||||    
T  8484048 ttcc 8484051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 30454101 - 30454208
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||| ||||||||||||||||||  ||||| ||||||    
T  30454101 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttg--ttttacacaaga 30454198  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  30454199 ggctgtttcc 30454208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 26954266 - 26954154
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttg-ttttttaaaca 207  Q
    ||||| || ||||||||||||||||||||| || || |||| ||||||||| ||| |||  | |||||||||||||||||||||| || ||||||| |||    
T  26954266 ggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacaca 26954167  T
Q  208 agaggctgtttcc 220  Q
    |||||||||||||    
T  26954166 agaggctgtttcc 26954154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 12670260 - 12670361
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||||||||    
T  12670260 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaagaggctgt 12670357  T
Q  217 ttcc 220  Q
    ||||    
T  12670358 ttcc 12670361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 2626658 - 2626541
Alignment:
Q  106 caaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc---ttgtttttt 202  Q
    |||| ||||||| |||||||| ||||||||||||| ||| | |||| ||||||||| ||  |||| ||||||||||||||| ||||||   || ||||||    
T  2626658 caaagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgttttttttt 2626559  T
Q  203 aaacaagaggctgtttcc 220  Q
    | ||||||||||||||||    
T  2626558 acacaagaggctgtttcc 2626541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 5135300 - 5135402
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||||||| |||||||| ||||||||| | || | ||||||||| ||| |||| ||||||||||| |||||||||| | ||||||| ||||||||||||    
T  5135300 ccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgt 5135398  T
Q  217 ttcc 220  Q
    ||||    
T  5135399 ttcc 5135402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 5689761 - 5689659
Alignment:
Q  112 gcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagag 211  Q
    |||| ||||||||||||||||||| |||||||| | |  | ||||||||  ||| |||| |||||||||||||||||||||| || |||||| |||||||    
T  5689761 gcaaaccggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagag 5689662  T
Q  212 gct 214  Q
    |||    
T  5689661 gct 5689659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 10857960 - 10857850
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaag 209  Q
    ||||| |||||||||||||||||||||||||||||| ||   |||| |||| ||| | || ||||||||| |||||||||||| || ||||||| |||||    
T  10857960 ggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttttacacaag 10857861  T
Q  210 aggctgtttcc 220  Q
    |||| ||||||    
T  10857860 aggcggtttcc 10857850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 12626021 - 12625911
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaag 209  Q
    ||||| |||||||||||||||||||||||||||| | || | || |||||| ||| |||| |||||||||| |||| |||||| || ||||||| |||||    
T  12626021 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaag 12625922  T
Q  210 aggctgtttcc 220  Q
    ||| |||||||    
T  12625921 aggttgtttcc 12625911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 18164760 - 18164872
Alignment:
Q  107 aaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaac 206  Q
    ||||||||| |||||||||||||||||||||||||||| | || | |||  |||| ||   ||| |||||||||||||| ||||||| || |||||| ||    
T  18164760 aaatggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctg-tttttacac 18164858  T
Q  207 aagaggctgtttcc 220  Q
    ||||||||||||||    
T  18164859 aagaggctgtttcc 18164872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 20284079 - 20284186
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactat--ttagtgtattgtacgcagccttacc--ttgttttttaaacaagagg 212  Q
    ||||||||||||| |||||||||||||| | || | ||||||||| ||| ||  || ||||||||||||||||||||||  || ||||||| ||||||||    
T  20284079 ccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagagg 20284178  T
Q  213 ctgtttcc 220  Q
    ||||||||    
T  20284179 ctgtttcc 20284186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 22598279 - 22598179
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||| ||||||||||||||| || | ||| ||||||||| | || |||||||||||  ||||||||| ||||||||| |||||||| |||||    
T  22598279 ggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgttt 22598181  T
Q  219 cc 220  Q
    ||    
T  22598180 cc 22598179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 20870056 - 20869945
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||| ||  | ||   ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| ||||    
T  20870056 ggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 20869957  T
Q  209 gaggctgtttcc 220  Q
    ||| ||||||||    
T  20869956 gagactgtttcc 20869945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 21070707 - 21070815
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactat--ttagtgtattgtacgcagccttacc---ttgttttttaaacaagag 211  Q
    ||||||||||||| |||||||||||||| | || | ||||||||| ||| ||  || ||||||||||||||||||||||   || ||||||| |||||||    
T  21070707 ccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagag 21070806  T
Q  212 gctgtttcc 220  Q
    |||||||||    
T  21070807 gctgtttcc 21070815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 7136537 - 7136642
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaagaggct 214  Q
    |||||||||||||||||||||||| ||  | || | ||||||||| ||| |||  | |||||||||||||||||||||| || |||||| |||||||| |    
T  7136537 ccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggtt 7136636  T
Q  215 gtttcc 220  Q
    ||||||    
T  7136637 gtttcc 7136642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 219
Target Start/End: Original strand, 24365071 - 24365172
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaagaggctgt 216  Q
    |||||||| ||||||||| |||||||| | || | ||||||||| ||| |||| ||||||||| |||||||||||| || ||||||| ||||||||||||    
T  24365071 cggtgcac-aaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgt 24365169  T
Q  217 ttc 219  Q
    |||    
T  24365170 ttc 24365172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 8897776 - 8897877
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||| ||||||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||| ||||||||| | ||||||| ||||| || |||||    
T  8897776 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgttt 8897875  T
Q  219 cc 220  Q
    ||    
T  8897876 cc 8897877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 31457303 - 31457224
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagcctt 190  Q
    ||||||||||||||||| |||||||||||||||| | | || |||||||||  || ||||  ||||||||||||||||||    
T  31457303 ggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagcctt 31457224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 44742528 - 44742639
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    |||||||||||| |||||||||| || | | ||  |||||||||| ||| |||| | ||||||||||||||||||||| ||||||||| ||| |||  ||    
T  44742528 ccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattg 44742627  T
Q  216 tttccggaactt 227  Q
    ||||| ||||||    
T  44742628 tttccagaactt 44742639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 44781517 - 44781619
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    ||||||||||||||||||||||||| | |||| || |||||| ||  ||||   ||||||||||| |||||||||| ||| ||||| |||||||| ||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  218 tcc 220  Q
    |||    
T  44781617 tcc 44781619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 389773 - 389665
Alignment:
Q  114 aatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttt--aaacaagag 211  Q
    |||||||||||||||||||| |||||||||| | || |  ||||| || ||  |||| |||||||||||||| ||||||| ||||||||  | |||||||    
T  389773 aatccggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagag 389674  T
Q  212 gctgtttcc 220  Q
    | |||||||    
T  389673 ggtgtttcc 389665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 17823707 - 17823598
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||| ||||| ||| | |  | ||||||||  ||| |||| ||||||| ||||||| |||| | || |||||| ||||||    
T  17823707 ggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacacaaga 17823608  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  17823607 ggctgtttcc 17823598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 19729471 - 19729382
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    |||||||| |||||||| |||||||| ||| ||| | || | ||||||||| ||| |||| ||||||||||| |||||||||| ||||||    
T  19729471 ggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 26457852 - 26457778
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    ||||||||||||||||||| |||||||||| ||  || ||||||| ||| | || ||||||||||||||||||||||    
T  26457852 ccggtgcactaaagctccctcatacgcaaggtc--aggaggggtcccaccaattggtgtattgtacgcagccttacc 26457778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 16013581 - 16013511
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgca 185  Q
    |||||||||||||||||||||||| ||| | |||| ||||||||| |||  | ||||||||||||||||||    
T  16013581 ccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 16225146 - 16225045
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaagaggct 214  Q
    |||||||||||||||||||||||| ||  | || | |||||| || ||| |||  | ||||||||||||||| |||||| ||||||||| | ||||||||    
T  16225146 ccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttacataagaggct 16225047  T
Q  215 gt 216  Q
    ||    
T  16225046 gt 16225045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 14018029 - 14018082
Alignment:
Q  167 atttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||||||||| || ||| ||||||||| ||||||| ||||||||    
T  14018029 atttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttcc 14018082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 25250655 - 25250544
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| ||||||||||||| |||||||||| ||  | |  | ||||||||| ||| |||  | ||||||||||||||||| |||| | ||||||| ||||    
T  25250655 ggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaa 25250556  T
Q  209 gaggctgtttcc 220  Q
     |||||||||||    
T  25250555 taggctgtttcc 25250544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 26102648 - 26102578
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgta 181  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| ||||||||||    
T  26102648 ggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 43942394 - 43942348
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||||||||||| ||||||| | | ||||||||||||    
T  43942394 gtgtattgtacgcagccttaccctgtttttgacataagaggctgttt 43942348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 27468096 - 27468129
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  27468096 ggcaacccggtgcactaaagctcccgcatacgca 27468129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 17250942 - 17250990
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||||| |||||| | ||||||||| ||||||||||| ||||    
T  17250942 gtgtattgtacgctgccttaacctgttttttacacaagaggctgcttcc 17250990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 20869523 - 20869609
Alignment:
Q  130 gctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||| ||| | || | |||||||||||||   || ||||||||||| |||||||||| ||  ||||| ||||||||||||||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctg--ttttacacaagaggctgtttcc 20869609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 23768325 - 23768433
Alignment:
Q  112 gcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagag 211  Q
    |||||||| |||||||||||||||||||||||| | |||| ||||| ||| ||| |||| |||||||||||||||||||||| ||||||||| |||||||    
T  23768325 gcaatccgctgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagag 23768424  T
Q  212 gctgtttcc 220  Q
    |||||||||    
T  23768425 gctgtttcc 23768433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 46247957 - 46248066
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||| |||||||||||||||||||||| | || | ||||||||| ||| |||| ||||||||||||||| |||||| ||||||||| ||||||    
T  46247957 ggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaaga 46248056  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  46248057 ggctgtttcc 46248066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 23796613 - 23796510
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||||| ||||| ||| | |||| ||||||||||||| |||| |||||||||||||| |||||| ||| |||||| ||||||||||||    
T  23796613 ccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacacaagaggctgt 23796514  T
Q  217 ttcc 220  Q
    ||||    
T  23796513 ttcc 23796510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 4349792 - 4349700
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttta 203  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| |||||||||    
T  4349792 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttta 4349700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 10668381 - 10668270
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||||||| |  | | ||||||||| ||| |||  | |||||||||||||| ||||||||||||||||| ||||    
T  10668381 ggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaa 10668282  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  10668281 gaggctgtttcc 10668270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 20004094 - 20004205
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||| ||  | |||| ||||||||| ||| |||  | |||||||||||||||||||||||||||||||| || |    
T  20004094 ggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacga 20004193  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  20004194 gaggctgtttcc 20004205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 1517315 - 1517418
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaa-acaag 209  Q
    ||||| |||||||||||||||||| ||||||||| | |||||||||||||| ||| | || |||||||||||||||||||| | |||||||||| |||||    
T  1517315 ggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagccttatcatgttttttaacacaag 1517414  T
Q  210 aggc 213  Q
    ||||    
T  1517415 aggc 1517418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 14617186 - 14617083
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||||||||||| ||| | || | |||||| || ||| |||| |||||||||||||| |||||||||||| |||| ||||||||||||    
T  14617186 ccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgt 14617087  T
Q  217 ttcc 220  Q
    ||||    
T  14617086 ttcc 14617083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 34725102 - 34725209
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| ||||||||||||||||||||||||||| ||  ||||| ||||||    
T  34725102 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctg--ttttacacaaga 34725199  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  34725200 ggctgtttcc 34725209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 18944800 - 18944688
Alignment:
Q  111 ggcaatccggtgcactaaa-gctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaaca 207  Q
    ||||| ||||||||||||| ||||||||||||||| | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| |||    
T  18944800 ggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacaca 18944701  T
Q  208 agaggctgtttcc 220  Q
    |||||||||||||    
T  18944700 agaggctgtttcc 18944688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 27474434 - 27474326
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    |||||||||||||||||||||||||||||||||| | || | ||||||||| ||| ||| ||||||||||||||||| || || || |||||| ||||||    
T  27474434 ggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctg-tttttacacaaga 27474336  T
Q  211 ggctgtttcc 220  Q
    | ||||||||    
T  27474335 gactgtttcc 27474326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 35253191 - 35253297
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||||||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  35253191 ggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 35253288  T
Q  211 ggctgtttc 219  Q
    |||||||||    
T  35253289 ggctgtttc 35253297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 46991958 - 46991849
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||||||||||| |||||||| | || | ||||||||| ||| |||  ||||||||||| |||||||||| ||||||||| ||||||    
T  46991958 ggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaaga 46991859  T
Q  211 ggctgtttcc 220  Q
    || |||||||    
T  46991858 ggttgtttcc 46991849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 219
Target Start/End: Original strand, 38478275 - 38478392
Alignment:
Q  100 tattaacaaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttt 199  Q
    |||||| ||| ||||| ||||||||||| |||||||||||| ||| | || ||||||||||  ||| |||| |||||||||||||||||||||| ||  |    
T  38478275 tattaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctg--t 38478372  T
Q  200 tttaaacaagaggctgtttc 219  Q
    |||| |||||||||||||||    
T  38478373 tttacacaagaggctgtttc 38478392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 27201793 - 27201692
Alignment:
Q  121 tgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||||||||||||||| || | ||||||||| ||| ||||   |||||||||||||||||||||| ||||| | | ||||||||||||||    
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgttt 27201694  T
Q  219 cc 220  Q
    ||    
T  27201693 cc 27201692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 35005279 - 35005170
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| ||||||||||||||| |||||||||||| | || | ||||||||| ||| ||||   |||||||||| ||||||||||| ||||||||| ||||    
T  35005279 ggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaa 35005180  T
Q  209 gaggctgttt 218  Q
    ||||||||||    
T  35005179 gaggctgttt 35005170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 30395737 - 30395841
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    ||||||||||||||||||||||| ||  | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| |||||||||||    
T  30395737 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctg 30395836  T
Q  216 tttcc 220  Q
    |||||    
T  30395837 tttcc 30395841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 32632569 - 32632669
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||| ||||||||||||| ||| | | || ||||||||| ||| |||| |||||||||||||||||||||| || |||||| ||||||||||||||    
T  32632569 ggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgttt 32632667  T
Q  219 cc 220  Q
    ||    
T  32632668 cc 32632669  T

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Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 10378745 - 10378828
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    |||||||||||||||||||||||| ||| | ||  |||||||||| ||| |||| |||||||||||||||||||||| ||||||    
T  10378745 ccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

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Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 45402250 - 45402175
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcag 186  Q
    ||||| |||||||||||||||||||||||||||| | |||| ||||||||| ||| |||| |||||||||||||||    
T  45402250 ggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcag 45402175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 47214660 - 47214556
Alignment:
Q  114 aatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggc 213  Q
    |||| ||||||||| |||||||||||| ||| | |||| ||||||||| ||| |||| |||||||||||||| ||||||| ||  ||||||||||||| |    
T  47214660 aatctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttaaacaagagac 47214563  T
Q  214 tgtttcc 220  Q
    |||||||    
T  47214562 tgtttcc 47214556  T

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Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 6925247 - 6925145
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    ||||||||||||||||||||||||||| |  | | ||||||||| ||| |||  ||||||||| |||||||||||| | ||||||| |||||||||| ||    
T  6925247 cggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatt 6925148  T
Q  218 tcc 220  Q
    |||    
T  6925147 tcc 6925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 12126850 - 12126955
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    |||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| |||||| ||||||||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctg--ttttacacaagaagctgtttc 12126947  T
Q  220 cggaactt 227  Q
    | ||||||    
T  12126948 cagaactt 12126955  T

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Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 18741967 - 18742054
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgcagccttaccttgtttttt 202  Q
    ||||||||||||||||| |||||||||| | |||| ||||||||| |||  | ||| |||||||||||||||||||||| ||||||||    
T  18741967 ccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T

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Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 27136660 - 27136772
Alignment:
Q  116 tccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggct 214  Q
    |||||||||||  ||||||||||||| || |||||  ||||||||| ||| |||| | ||||||||||||| ||||||| ||||||||| |||||||| |    
T  27136660 tccggtgcactggagctcccgcatacacatgatctaggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggtt 27136759  T
Q  215 gtttccggaactt 227  Q
    ||| || ||||||    
T  27136760 gttcccagaactt 27136772  T

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Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 9939612 - 9939506
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaagggg-tctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaagaggc 213  Q
    |||||||||||||||||||||||||||| | || ||||||||| || ||| ||||   |||||||| ||||| ||||||| ||||| ||||||||||||     
T  9939612 ccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggt 9939513  T
Q  214 tgtttcc 220  Q
    |||||||    
T  9939512 tgtttcc 9939506  T

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Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 17470361 - 17470458
Alignment:
Q  121 tgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    ||||||||||||||| |||||||| | || | ||| ||||| |||||||| | ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  17470361 tgcactaaagctcccacatacgcagg-tcag-gaacgggtcccactattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttc 17470458  T

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Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 44485120 - 44485222
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||||||| |||||||||||||||| | |||| | |||||||||  || |||| |||||||||||||||||||||| ||| ||||| ||||| || |||    
T  44485120 ccggtgcac-aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgt 44485218  T
Q  217 ttcc 220  Q
    ||||    
T  44485219 ttcc 44485222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 8197197 - 8197095
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||| ||||||||||||  |||||||| | || |||||||||||  || |||| ||||| |||||| ||||||||| ||||||||| ||||||    
T  8197197 ggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttacacaaga 8197098  T
Q  211 ggc 213  Q
    |||    
T  8197097 ggc 8197095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 45264411 - 45264513
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcacta-tttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    |||||||||||||||||||||| ||| | |||||||||||||| ||| | ||| |||||||| || |||||||||  ||||||||  |||||||| ||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtt 45264510  T
Q  218 tcc 220  Q
    |||    
T  45264511 tcc 45264513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 18724565 - 18724658
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||| | | | || | ||||||||| ||  |||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  18724565 aaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttcc 18724658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 31382218 - 31382326
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||| || ||||||||||||||| ||| | ||   ||||||||| ||| |||| |||||||||||||||||||| | || |||||| ||||||    
T  31382218 ggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-tttttacacaaga 31382316  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  31382317 ggctgtttcc 31382326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 42304211 - 42304303
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgcagccttaccttgttttt 201  Q
    ||||||||||||||||||||||||| |||||||| | || | ||||||||| |||  | ||| |||||||||||||| ||||||| |||||||    
T  42304211 ggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 218
Target Start/End: Complemental strand, 19701717 - 19701617
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    |||||||||||||||||||||||||| | || | ||||||| | ||| |||| | |||||||||| || |||||||  |||||||| |||||||||||||    
T  19701717 ggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggctgtt 19701618  T
Q  218 t 218  Q
    |    
T  19701617 t 19701617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 25468285 - 25468376
Alignment:
Q  129 agctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||||| | |||| |||| ||||  || |||| |||||||||||||| ||||||| || |||||| |||||||| |||||||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttcc 25468376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 41319852 - 41319919
Alignment:
Q  153 gaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||| ||  |||| |||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  41319852 gaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttcc 41319919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 43768287 - 43768205
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttt 199  Q
    |||||||| ||||||||||| ||||||| | |||| ||||||||| ||| | || |||||||||| ||||||||||| |||||    
T  43768287 ccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 45812541 - 45812623
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    ||||| ||||||||||| |||||||||||| ||| | | || ||||||||| ||| |||| |||||||||| |||||||||||    
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttacc 45812623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 19414591 - 19414502
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    ||||| ||||||||||| |||||||||||| ||| | |  | ||||||||| ||| |||| |||||||||||||||||||| | ||||||    
T  19414591 ggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgtttt 19414502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 20999860 - 20999957
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggct 214  Q
    ||||||||||||||||||||| |||||| | |    ||||||| | ||  |||| ||||||||||||||||||| |||||||||||| ||||| ||||    
T  20999860 ccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcagccttgccttgttttttacacaagtggct 20999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 11596650 - 11596559
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    |||||||||||||||||| | ||   ||||||||| ||| |||| ||||||| |||||||||||||| || |||||| |||||||| ||||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctg-tttttacacaagaggttgtttc 11596559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 35019387 - 35019277
Alignment:
Q  107 aaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaac 206  Q
    ||||||||  ||||||||||||||||| |||||||||| | |||| | ||||||| ||| | || |||||||||| |||||||||   || |||||| ||    
T  35019387 aaatggcagcccggtgcactaaagctctcgcatacgcagggtctg-ggaggggtcccaccaattggtgtattgtatgcagccttatactgatttttatac 35019289  T
Q  207 aagaggctgttt 218  Q
    |||||| |||||    
T  35019288 aagaggttgttt 35019277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 6983821 - 6983922
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||||||| |||||||| || |||||| | || |  |||||||| ||| |||| ||||||||||||||  |||||| ||||||||| ||  ||||||||    
T  6983821 ccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttatac--gaggctgt 6983918  T
Q  217 ttcc 220  Q
    ||||    
T  6983919 ttcc 6983922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 39214968 - 39215072
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtg-tattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    |||||||||||||||| || |||||||| | | || ||||||| | ||| |||| |   |||||||||||||||||||  |||||||| |||||||| ||    
T  39214968 ccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaagaggttg 39215067  T
Q  216 tttcc 220  Q
    |||||    
T  39215068 tttcc 39215072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 15505710 - 15505636
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    |||||||| |||||||||||||||||| | |  | ||||||||| ||| |||| ||||||||||||||| ||||||    
T  15505710 cggtgcac-aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 15505636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 15511158 - 15511264
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcacta-tttagtgtattgta--cgcagccttaccttgttttttaaacaagaggc 213  Q
    ||||||||||||||||| | |||||||| | ||   ||||||||  ||| | ||| ||||||||||  |||||||||||| ||||||||| |||||||||    
T  15511158 ccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttacacaagaggc 15511257  T
Q  214 tgtttcc 220  Q
     ||||||    
T  15511258 ggtttcc 15511264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 34149006 - 34149073
Alignment:
Q  153 gaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||||| |||| || | ||||||||| ||||||| | |||| || ||||||||||||||||    
T  34149006 gaaggggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttcc 34149073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 35117775 - 35117881
Alignment:
Q  117 ccggtgcactaaagctcccgcat-acgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaagaggc 213  Q
    |||||||||||||||||| |||| ||||| | || | ||||||||| ||  ||||   ||||||||||| |||||||||| ||| ||||| |||||||||    
T  35117775 ccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggc 35117874  T
Q  214 tgtttcc 220  Q
    | |||||    
T  35117875 tatttcc 35117881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 46859215 - 46859129
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgtttttt 202  Q
    ||||||||||||| ||||| ||||||||||  |||| || | ||| ||| |||| | |||||||||||||| |||||| ||||||||    
T  46859215 ccggtgcactaaaactcccacatacgcaaggcctgaaaatgagtcccaccattttggtgtattgtacgcagtcttaccctgtttttt 46859129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 25028030 - 25027989
Alignment:
Q  178 tgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    |||| |||||||||||| |||||||| |||||||||||||||    
T  25028030 tgtatgcagccttacctcgttttttacacaagaggctgtttc 25027989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 33594144 - 33594185
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtc 161  Q
    ||||||||||||||||||||||||| | |||| |||||||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtc 33594185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 19656171 - 19656219
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||  ||| ||||| ||||||||| ||||||||||||||||    
T  19656171 gtgtattgtacatagcgttaccatgttttttacacaagaggctgtttcc 19656219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 19932820 - 19932856
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  19932820 gtgtattgtacgcagccttaccctgttttttacacaa 19932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 22324985 - 22324938
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||| ||||||||||| || |||||| ||||||||||||||||    
T  22324985 gtgtattgtatgcagccttaccctg-tttttacacaagaggctgtttcc 22324938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 54484844 - 54484734
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtt-ttttaaacaag 209  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||| ||||||||||||||||||||||||||| ||||| |||||    
T  54484844 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacacaag 54484745  T
Q  210 aggctgtttcc 220  Q
    |||||||||||    
T  54484744 aggctgtttcc 54484734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 40272816 - 40272925
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||||||||| ||||||    
T  40272816 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaga 40272915  T
Q  211 ggctgtttcc 220  Q
    || |||||||    
T  40272916 ggttgtttcc 40272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 12914039 - 12914148
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||| | ||||||||||||| ||| | |||| ||||||||||||| |||| ||||||||||||| |||||||| ||||||||| ||||||    
T  12914039 ggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaaga 12914138  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  12914139 ggctgtttcc 12914148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 22609918 - 22609810
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||| ||||||||||||||||||| || | ||||||||| ||| |||| |||||||||||||||||||||| || |||||| ||||||    
T  22609918 ggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaaga 22609820  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  22609819 ggctgtttcc 22609810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 218
Target Start/End: Original strand, 6411833 - 6411932
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||  |||| |||||||||||||||||||||| || |||||| |||||||||||||    
T  6411833 cggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtt 6411931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 13628794 - 13628905
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||| ||| ||||    
T  13628794 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaa 13628893  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  13628894 gaggctgtttcc 13628905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 45948848 - 45948951
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||||||||||||||| | || ||||||||||| ||| | || |||||||||| ||||||||||| | ||||||| |||||||| |||    
T  45948848 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgt 45948947  T
Q  217 ttcc 220  Q
    ||||    
T  45948948 ttcc 45948951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 14987106 - 14987001
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaagaggct 214  Q
    |||||||||||||||||||||||| ||||| || | ||| ||||| ||| |||  | |||||||||||||||||||||| ||||||||| ||||||||||    
T  14987106 ccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggct 14987007  T
Q  215 gtttcc 220  Q
    ||||||    
T  14987006 gtttcc 14987001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 25517174 - 25517284
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaag 209  Q
    ||||| |||||||||||||||||| ||||||||| |||| | ||||||||| ||| |||| ||||||||||||||||| || |||| ||||||| |||||    
T  25517174 ggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttttacacaag 25517273  T
Q  210 aggctgtttcc 220  Q
    ||| |||||||    
T  25517274 aggatgtttcc 25517284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 34420656 - 34420757
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||||| |||||||||| || | ||||||||| ||| |||| | ||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgttt 34420755  T
Q  219 cc 220  Q
    ||    
T  34420756 cc 34420757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 39203667 - 39203561
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||||||||| ||||| || | ||||||||| ||| |||| |||||||||||||| ||||||| ||  ||||| ||||||    
T  39203667 ggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacacaaga 39203570  T
Q  211 ggctgtttc 219  Q
    |||||||||    
T  39203569 ggctgtttc 39203561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 46421038 - 46421150
Alignment:
Q  111 ggcaatccggtgcact-aaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaaca 207  Q
    ||||| |||||||||| |||||||||||||||||| | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| |||    
T  46421038 ggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacaca 46421137  T
Q  208 agaggctgtttcc 220  Q
    |||||||||||||    
T  46421138 agaggctgtttcc 46421150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 29366724 - 29366835
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| || |||||||||||||||| |||||||| | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| ||||    
T  29366724 ggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaa 29366823  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  29366824 gaggctgtttcc 29366835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 49013466 - 49013588
Alignment:
Q  100 tattaacaaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgt 197  Q
    |||||| ||| ||||| ||||||||||||||||||||| || ||  | || | ||||||||| ||| |||  | |||||||||||||||||||||| |||    
T  49013466 tattaaaaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 49013565  T
Q  198 tttttaaacaagaggctgtttcc 220  Q
    |||||| ||||||||||||||||    
T  49013566 tttttacacaagaggctgtttcc 49013588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 45786218 - 45786327
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||| |||| |||| | || | ||||||||| ||| ||||   |||||||||||||||||||||| ||||||||| ||||    
T  45786218 ggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa 45786317  T
Q  209 gaggctgttt 218  Q
    ||||||||||    
T  45786318 gaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 7943143 - 7943034
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| || ||||||||||||||||||||||||| | ||||  ||||| || ||| ||||  |||||||||||||| |||||| ||||||||| ||||||    
T  7943143 ggcaacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaaga 7943044  T
Q  211 ggctgtttcc 220  Q
     |||||||||    
T  7943043 tgctgtttcc 7943034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 26573272 - 26573171
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    ||||||||||||||| |||||||||| | || | || |||||| ||| | || |||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  26573272 ggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgttt 26573173  T
Q  219 cc 220  Q
    ||    
T  26573172 cc 26573171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 26869859 - 26869751
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||| |||||||||||||||||| | || |  |||||||| ||| |||| |||||||||||||||||||||| || |||||| || |||    
T  26869859 ggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacaccaga 26869761  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  26869760 ggctgtttcc 26869751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 13730606 - 13730717
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||| ||  | || | ||||||||| ||| |||  | ||||||||||| |||||||||| ||||||||| ||||    
T  13730606 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaa 13730705  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  13730706 gaggctgtttcc 13730717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 31593005 - 31592893
Alignment:
Q  106 caaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaa 205  Q
    |||| ||||| ||||||||||| |||||||||||| ||| | || | ||||| ||| ||| |||| |||||||||||||||||||||| ||  ||||| |    
T  31593005 caaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctg--ttttaca 31592908  T
Q  206 caagaggctgtttcc 220  Q
    |||||||||||||||    
T  31592907 caagaggctgtttcc 31592893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 516565 - 516453
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtg---tattgtacgcagccttaccttgttttttaaaca 207  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| | | ||||  ||   |||||| |||||||||||| ||||||||| |||    
T  516565 ggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttacaca 516466  T
Q  208 agaggctgtttcc 220  Q
    |||||||||||||    
T  516465 agaggctgtttcc 516453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 1217241 - 1217134
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| | | |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  1217241 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 1217144  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  1217143 ggctgtttcc 1217134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 31904868 - 31904970
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaa-ggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    |||||||||||||||||||| ||| |||||||| ||| |||||| ||| |||| ||||||||||||||| | |||| ||||||||| | || ||||||||    
T  31904868 ggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttttacataataggctgtt 31904967  T
Q  218 tcc 220  Q
    |||    
T  31904968 tcc 31904970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 10795435 - 10795538
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||| ||||||||||||||||| | ||   ||||||||| ||| ||||   |||||||||||||||||||||| ||| ||||| ||||||||||||    
T  10795435 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgt 10795534  T
Q  217 ttcc 220  Q
    ||||    
T  10795535 ttcc 10795538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 53996575 - 53996679
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    ||||||||||||||||||| ||||||||   || | ||||||||| ||| |||| | ||||||||| ||||||||||| ||||||||| |||||||| ||    
T  53996575 ccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggttg 53996674  T
Q  216 tttcc 220  Q
    |||||    
T  53996675 tttcc 53996679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 19731149 - 19731046
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||||| |||||| ||   |||| ||| ||||| ||| | |  |||||||||||||| ||||||||||||||||| |||||||||| |    
T  19731149 ccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctat 19731050  T
Q  217 ttcc 220  Q
    ||||    
T  19731049 ttcc 19731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 34771374 - 34771457
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||||||    
T  34771374 ccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 22122921 - 22123028
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| ||||| |||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  22122921 ggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 22123018  T
Q  211 ggctgtttcc 220  Q
    | ||||||||    
T  22123019 gactgtttcc 22123028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 55401324 - 55401222
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    ||||||||  |||||||||||||||| ||| || ||||||||||| ||| |||| | |||||| ||||||| |||| | ||||||||| |||||||||||    
T  55401324 ccggtgcaaaaaagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctg 55401225  T
Q  216 ttt 218  Q
    |||    
T  55401224 ttt 55401222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 8247706 - 8247802
Alignment:
Q  126 taaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||||||||||| | || | ||||| ||| ||| |||  | |||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttcc 8247802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 9276401 - 9276313
Alignment:
Q  126 taaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    ||||| ||||||||||||| | || | ||| ||||| ||| |||| |||||||||||||||||||||| ||||||||| |||||||||||    
T  9276401 taaagttcccgcatacgcagggtccgggaaagggtc-caccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 15797373 - 15797284
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    ||||| ||||||||||| ||||||| |||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||||||    
T  15797373 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 15797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 52926223 - 52926304
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttac 192  Q
    ||||| ||||||| |||||||||||||||||||| | || | ||||| ||| ||| |||| |||||||||||||||||||||    
T  52926223 ggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 16735593 - 16735486
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| || ||||||| ||||| |||||||||||   || | ||||||||| ||| |||| |||||||||||||||||||||| || |||||  ||||||    
T  16735593 ggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttctacaaga 16735495  T
Q  211 ggctgtttc 219  Q
    |||||||||    
T  16735494 ggctgtttc 16735486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 33235676 - 33235581
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaagaggct 214  Q
    |||||||||||||| ||||||||| ||| |||| || |||||| ||| |||||||||||||||| ||| |||||| || ||||||| ||||||||||    
T  33235676 ggtgcactaaagcttccgcatacgtaaggtctgcga-ggggtcccaccatttagtgtattgtacacagtcttaccctgtttttttacacaagaggct 33235581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 52428480 - 52428590
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtct-------cactatttagtgtattgtacgcagccttaccttgttttttaaacaag 209  Q
    ||||||||||||||||||| |||||| | | || |||||||||| |       |||||||| |||||||||||||||||||||| ||| ||||| |||||    
T  52428480 ccggtgcactaaagctcccacatacgtagggtccgagaaggggtttggggttccactatttggtgtattgtacgcagccttaccctgtattttacacaag 52428579  T
Q  210 aggctgtttcc 220  Q
    |||||| ||||    
T  52428580 aggctgcttcc 52428590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 353353 - 353447
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgtttttta 203  Q
    ||||| |||||||||||||||||||||||| ||  | || | ||||||||| ||| |||  | |||||||||||||||||||||| |||||||||    
T  353353 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 353447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 19751725 - 19751622
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||||  |||||| |||  |||| ||| ||||| ||| | |  |||||||||||||| |||||||||| |||||| |||||||||| |    
T  19751725 ccggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggctat 19751626  T
Q  217 ttcc 220  Q
    ||||    
T  19751625 ttcc 19751622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 31672839 - 31672737
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggg-gtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    |||||||||||||||||||| ||| ||||| || |||| | ||| ||| |||| ||||||||||||||  ||| |||||||||||| | || ||||||||    
T  31672839 ggtgcactaaagctcccgcacacgtaagatatgggaagagagtcccaccatttggtgtattgtacgcactcttgccttgttttttacataataggctgtt 31672740  T
Q  218 tcc 220  Q
    |||    
T  31672739 tcc 31672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 54374357 - 54374459
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    |||| ||||||||||||||||| ||| | || | ||||||||| ||| |||| | || |||||||||||||||||| | ||||||| |||||||| ||||    
T  54374357 ggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtt 54374456  T
Q  218 tcc 220  Q
    |||    
T  54374457 tcc 54374459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 47624152 - 47624088
Alignment:
Q  153 gaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    ||||||||| ||| |||| |||||||||||||||||||||| || |||||| ||||||||||||||    
T  47624152 gaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 5173723 - 5173833
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||||||||| || | ||||||| | |||  | ||| |||||||| | ||| |||||| ||| |||||| ||||    
T  5173723 ggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttg-tttttacacaa 5173821  T
Q  209 gaggctgtttcc 220  Q
    |||| |||||||    
T  5173822 gaggttgtttcc 5173833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 45620893 - 45620949
Alignment:
Q  172 gtgtattgtacgcagccttaccttg-ttttttaaacaagaggctgtttccggaactt 227  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||| ||||||    
T  45620893 gtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaactt 45620949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 4495671 - 4495771
Alignment:
Q  102 ttaacaaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttt 201  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||            ||||| ||| |||| |||||||||||||||||||||| |||||||    
T  4495671 ttaaaaaagggcaacccggtgcactaaagctcccgcatacgca------------gggtcccaccatttggtgtattgtacgcagccttaccctgttttt 4495758  T
Q  202 taaacaagaggct 214  Q
    || |||| |||||    
T  4495759 tacacaataggct 4495771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 9607345 - 9607247
Alignment:
Q  124 actaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||||||||| ||  | |||| ||||||||| ||  |||  | ||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcc 9607247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 21875112 - 21875057
Alignment:
Q  166 tatttagtgtattgtacgcagccttaccttgttttttaa-acaagaggctgtttcc 220  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||| |||||||    
T  21875112 tatttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttcc 21875057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 44403565 - 44403663
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtg-tattgtacgcagccttaccttgttttttaaacaagaggct 214  Q
    |||||||||||||||| | ||||||| | | || | ||||||||| ||| |||| ||| |||| | |||||||||||||||| ||||| ||||||||||    
T  44403565 ccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtcttttacacaagaggct 44403663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 45139488 - 45139591
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaagaggct 214  Q
    ||||||||| |||| ||||||||||||| | |||| ||||||||| ||| ||||   |||||||||| ||||||||||| ||| ||||| |||||||| |    
T  45139488 ccggtgcac-aaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggtt 45139585  T
Q  215 gtttcc 220  Q
    ||||||    
T  45139586 gtttcc 45139591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 24577998 - 24577917
Alignment:
Q  101 attaacaaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtac 182  Q
    ||||| ||| ||||||||||||||||| |||||||| ||| ||| | |||| ||| || || ||| ||||||||||||||||    
T  24577998 attaaaaaagggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 30928167 - 30928260
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||| |||| ||| | || | ||||||||| | | | || ||||||| ||| || ||||||||||||||||| ||||||||||||||||    
T  30928167 aaagctcccacatatgcagggtccgggaaggggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttcc 30928260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 54032624 - 54032672
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||| ||||||||||| ||||||||| |||||||| |||||||    
T  54032624 gtgtattgtatgcagccttaccctgttttttacacaagaggttgtttcc 54032672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 829452 - 829555
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcacta-tttagtgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    |||||||||||||||||| ||||||||| | |  | ||||||||| ||| | ||| |||||||||||||| | ||||  |||| |||| |||||||| ||    
T  829452 ccggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttactatgttctttagacaagaggttg 829551  T
Q  216 tttc 219  Q
    ||||    
T  829552 tttc 829555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 24851305 - 24851364
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattt 170  Q
    ||||| |||||||||||||||||||||||| ||| |||| | ||||||||| ||| ||||    
T  24851305 ggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 25944615 - 25944513
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    ||||| ||||||||||| |||||||| | || | ||||||||| ||| |||| | |||||||||| ||||||| ||  |||||||| || |||||| |||    
T  25944615 ggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacacgagaggcggtt 25944516  T
Q  218 tcc 220  Q
    |||    
T  25944515 tcc 25944513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 31922851 - 31922889
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaagg 157  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  31922851 ggtgcactaaagctcccgcatacgtaagatctgggaagg 31922889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 10484620 - 10484653
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  10484620 ggcaacccggtgcactaaagctcccgcatacgca 10484653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 40390394 - 40390361
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  40390394 ggcaacccggtgcactaaagctcccgcatacgca 40390361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 47624252 - 47624219
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  47624252 ggcaacccggtgcactaaagctcccgcatacgca 47624219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Original strand, 54032575 - 54032608
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  54032575 ggcaacccggtgcactaaagctcccgcatacgca 54032608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 20639662 - 20639772
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaag 209  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||| | ||||||||||||||||||||| ||||||||| |||||    
T  20639662 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaag 20639761  T
Q  210 aggctgtttcc 220  Q
    |||||||||||    
T  20639762 aggctgtttcc 20639772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 40915959 - 40915851
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    |||||||||||||||| ||||||||||||||||| | || | |||||| || ||| |||| |||||||||||||||||||||||||| ||||| ||||||    
T  40915959 ggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgt-ttttacacaaga 40915861  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  40915860 ggctgtttcc 40915851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 51865042 - 51865149
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    |||| ||||||||| ||||||||||||||||||| | || | ||||||| | ||| |||| |||||||||||||||||||||| ||||||||| ||||||    
T  51865042 ggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaaga 51865141  T
Q  211 ggctgttt 218  Q
    ||||||||    
T  51865142 ggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 5648389 - 5648281
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| || ||||||| ||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| || |||||| ||||||    
T  5648389 ggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaaga 5648291  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  5648290 ggctgtttcc 5648281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 6430630 - 6430738
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||| |||||||||||||||||||| | || | |||| |||| ||| |||| |||||||||||||||||||||| || |||||| ||||||    
T  6430630 ggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaaga 6430728  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  6430729 ggctgtttcc 6430738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 30639510 - 30639402
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| || ||||||||||||||||||||| ||| | || | ||||||||||||| |||| |||||||||||||||||||||| || |||||| ||||||    
T  30639510 ggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg-tttttacacaaga 30639412  T
Q  211 ggctgtttcc 220  Q
    | ||||||||    
T  30639411 gtctgtttcc 30639402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 219
Target Start/End: Complemental strand, 14983953 - 14983857
Alignment:
Q  123 cactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    |||||||||||||||||||||| | || | ||||||||| ||| ||||||||||||||| ||| ||||||| | ||||||| |||||||||||||||    
T  14983953 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttc 14983857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 17043413 - 17043507
Alignment:
Q  126 taaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||| ||||| ||| | |||| ||||||||| ||| |||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttcc 17043507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 25629180 - 25629071
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||||||||| | | | || | ||||||||| ||| |||| ||||||||||| |||||||||| | ||||||| ||||||    
T  25629180 ggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacacaaga 25629081  T
Q  211 ggctgtttcc 220  Q
    | ||||||||    
T  25629080 gactgtttcc 25629071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 47444088 - 47443979
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| || ||||||| ||||||| ||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| |||||||||  |||||    
T  47444088 ggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaaga 47443989  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  47443988 ggctgtttcc 47443979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 19027974 - 19027870
Alignment:
Q  116 tccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    |||||||||||||||||||| ||||||||   ||||  |||||||| ||| | || |||||||||||||||||||||| ||||||||| |||||| | ||    
T  19027974 tccggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttg 19027875  T
Q  216 tttcc 220  Q
    |||||    
T  19027874 tttcc 19027870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 21647097 - 21646986
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||| ||  | |||| ||||||||| ||| |||  | || ||||||||||||||||||| | ||||||| ||||    
T  21647097 ggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaa 21646998  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  21646997 gaggctgtttcc 21646986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 23501920 - 23501813
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||| ||| | || | ||||||||| ||| |||  | |||||||||||||| ||||||| ||||||||| ||||    
T  23501920 ggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaa 23501821  T
Q  209 gaggctgt 216  Q
    ||||||||    
T  23501820 gaggctgt 23501813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 20225118 - 20225006
Alignment:
Q  106 caaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaa 205  Q
    |||| ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| |    
T  20225118 caaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttaca 20225021  T
Q  206 caagaggctgtttcc 220  Q
    ||||||| |||||||    
T  20225020 caagaggttgtttcc 20225006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 35567295 - 35567192
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||||||||| ||||| | |  | ||||||||| ||| |||| |||| |||||| |||||||||| ||||||||| ||||| ||||||    
T  35567295 ccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctgt 35567196  T
Q  217 ttcc 220  Q
    ||||    
T  35567195 ttcc 35567192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 48598829 - 48598936
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||| ||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  48598829 ggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 48598926  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  48598927 ggctgtttcc 48598936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 29207902 - 29207991
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||||||    
T  29207902 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 29207991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 16408605 - 16408716
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||| ||  | || | ||||||||  ||| |||  | ||||||||||||||| |||||| ||||||||| ||||    
T  16408605 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaa 16408704  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  16408705 gaggctgtttcc 16408716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 30690188 - 30690272
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttta 203  Q
    |||||||||||||||||||||||||| | || | ||||||||| ||| | || |||||||||| ||||||||||| |||||||||    
T  30690188 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgtttttta 30690272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 9987844 - 9987947
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||| ||||||||||||||| ||||| ||   ||||||||| ||| |||| |||||||||| ||||||||||| | || |||| |||||||| |||    
T  9987844 ccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgt 9987943  T
Q  217 ttcc 220  Q
    ||||    
T  9987944 ttcc 9987947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 13256403 - 13256508
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||| | ||  | |  | ||||||||| |||||||  | |||||||||||||||||||||| ||||||||| ||||    
T  13256403 ggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttacacaa 13256502  T
Q  209 gaggct 214  Q
    ||||||    
T  13256503 gaggct 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 44363134 - 44363243
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| |||  | ||| |||  |||||||||||| |||| ||||||||| |||     
T  44363134 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttacacac 44363233  T
Q  209 gaggctgttt 218  Q
    ||||||||||    
T  44363234 gaggctgttt 44363243  T

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Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 47528534 - 47528641
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| ||||||| ||||  || | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  47528534 ggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 47528631  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  47528632 ggctgtttcc 47528641  T

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Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 55766476 - 55766558
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttt 199  Q
    ||||||||||||||||| |||||||||||| || | || |||||  ||| ||| ||||||||||||||||||||||| |||||    
T  55766476 ccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgttt 55766558  T

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Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 10277761 - 10277867
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||||||||| ||||| | |||||||||| ||| | |||| |||||||| |||| |||| ||||||||||||||||||||  |  | ||||| ||||||    
T  10277761 ggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagcctta--tcctattttatacaaga 10277858  T
Q  211 ggctgtttc 219  Q
    |||||||||    
T  10277859 ggctgtttc 10277867  T

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Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 20908649 - 20908750
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    ||||||||||||||||||||||||| | |  | ||||||||| ||| |||| | ||||||||||||||||||||||| ||||||| | |||| | |||||    
T  20908649 gtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttcttttttagaaaagacgatgttt 20908748  T
Q  219 cc 220  Q
    ||    
T  20908749 cc 20908750  T

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Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 41018807 - 41018880
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    |||||||||||| ||  |||||||||| |||| ||||||||| |||||||| |||||||||||| |||||||||    
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttacc 41018880  T

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Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 9832317 - 9832422
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| || ||| ||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  9832317 ggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 9832414  T
Q  211 ggctgttt 218  Q
    ||||||||    
T  9832415 ggctgttt 9832422  T

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Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 49796911 - 49796820
Alignment:
Q  128 aagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||||||||| | |  | ||||||||| ||| |||| |||||||||||||||||||||| || |||| | ||||||||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatg-ttttaacacaagaggctgtttcc 49796820  T

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Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 12711461 - 12711544
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttt 202  Q
    |||||||||||| | |||||||||| || |||||||||||||| | | |||| ||||||||||||||| |||||| | ||||||    
T  12711461 ggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttttt 12711544  T

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Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 16911695 - 16911585
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||  |||||||||||||| |||||| | || | ||||||||| ||| |||  | |||||||||||||||||||||| || ||| || ||||    
T  16911695 ggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaa 16911596  T
Q  209 gaggctgtttc 219  Q
    |||||||||||    
T  16911595 gaggctgtttc 16911585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 25343312 - 25343202
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||| ||||||||| | |||||||| |||||  |||||||||  ||  | ||| |||||||||||||||||||||| ||||||||| ||||||| || |    
T  25343312 ggtgctctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgttttttacacaagagactat 25343213  T
Q  217 ttccggaactt 227  Q
    |||| ||||||    
T  25343212 ttccagaactt 25343202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 54175190 - 54175088
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgag-aaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggct 214  Q
    |||||||||||||||||||||||| ||| | || | | |||||||| ||| |||| | ||||||||||||||||||||| || |||||| ||||||||||    
T  54175190 ccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctg-tttttacacaagaggct 54175092  T
Q  215 gttt 218  Q
    ||||    
T  54175091 gttt 54175088  T

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Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 7909284 - 7909393
Alignment:
Q  111 ggcaatccggtgcactaaagctccc-gcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaag 209  Q
    ||||| ||| ||||||||||||||| ||||||||| | |  | ||||||||| ||| |||| |||||||||||||| ||||||| || |||||| |||||    
T  7909284 ggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-tttttacacaag 7909382  T
Q  210 aggctgtttcc 220  Q
    || ||||||||    
T  7909383 agactgtttcc 7909393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 30352591 - 30352667
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcac--tatttagtgtattgtacgcagccttac 192  Q
    ||||||||||||||||||||||||||| | || ||||||||||| |||  | ||| |||||||||||||||| ||||    
T  30352591 cggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttac 30352667  T

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Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 487196 - 487248
Alignment:
Q  168 tttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||||||||| |||||||||||| || |||||||| |||||||    
T  487196 tttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttcc 487248  T

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Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 5306664 - 5306776
Alignment:
Q  111 ggcaatccggtgcactaaagctcccg----catacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaac 206  Q
    ||||| |||||||| |||||||||||    |||||||| | || | ||||||||| ||| |||| |||||||||||||| ||||||| ||  ||||| ||    
T  5306664 ggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-attttacac 5306762  T
Q  207 aagaggctgtttcc 220  Q
    ||||||||||||||    
T  5306763 aagaggctgtttcc 5306776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 39029126 - 39029174
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  39029126 gtgtattgtacacagccttaccctgttttttacacaagaggctgtttcc 39029174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 55830733 - 55830813
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttt 199  Q
    ||||||||||||||| |||||||||||| || | || |||||  ||| ||| ||||||||||||||||| ||||| |||||    
T  55830733 ggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctgttt 55830813  T

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Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 37494972 - 37494873
Alignment:
Q  121 tgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||| ||||||||| | ||    |||||||| ||| |||| || ||||||| ||| ||||||| ||||||||| |||||||| |||||||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttcc 37494873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 20405210 - 20405109
Alignment:
Q  121 tgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttg-ttttttaaacaagaggctgtt 217  Q
    |||||||||||||||||||| ||  | || | ||||||||| ||| |||  ||||||||||||||||  |||||| || ||||||| |||||||||||||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttacacaagaggctgtt 20405111  T
Q  218 tc 219  Q
    ||    
T  20405110 tc 20405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 39077800 - 39077907
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || |  |||  ||||||| |||| || ||||||||||| ||||||| ||  ||||| ||||||    
T  39077800 ggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctg--ttttacacaaga 39077897  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  39077898 ggctgtttcc 39077907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 11054152 - 11054241
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||  | | |||| ||||||||||||||| |||||| ||||||    
T  11054152 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgtttt 11054241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 20225207 - 20225123
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactat--ttagtgtattgtacgcagccttacc 193  Q
    ||||| |||||||||||||||||||||||| ||  | || | ||||||||| ||| ||  || ||||||||||||||||||||||    
T  20225207 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacc 20225123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 21489210 - 21489109
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||| |||||||||||||||||| | |  | ||||||||| ||| |||| | || ||||||||||| |||||  |||||||||  |||||||||||||    
T  21489210 gtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgttt 21489111  T
Q  219 cc 220  Q
    ||    
T  21489110 cc 21489109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 25463237 - 25463144
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||| ||| | || | ||||||||| ||| |||| |||| ||||||||| |||| ||  |||||||| |||||||| |||||||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttcc 25463144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 48033457 - 48033422
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaag 146  Q
    ||||||| ||||||||||||||||||||||||||||    
T  48033457 ggcaatcaggtgcactaaagctcccgcatacgcaag 48033422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 19425956 - 19425922
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaa 145  Q
    |||||||||||| ||||||||||||||||||||||    
T  19425956 ggcaatccggtgtactaaagctcccgcatacgcaa 19425922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 34256992 - 34257034
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaagggg 159  Q
    |||||||||||||||||||||||  ||||| ||||||||||||    
T  34256992 ccggtgcactaaagctcccgcatgtgcaaggtctgagaagggg 34257034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 38755912 - 38755962
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtc 161  Q
    ||||| |||||||||||||||||||||||||||| | || | |||||||||    
T  38755912 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 38755962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 40553941 - 40553991
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtc 161  Q
    ||||| |||||||||||||||||||||||||||| | || | |||||||||    
T  40553941 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 40553991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 10660521 - 10660426
Alignment:
Q  126 taaagctcccgcatacgcaagatctgagaaggggtctcactat--ttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||||||| || |||  ||||||||||||| ||  || |||||||||| |||||| |||| | ||||||| | |||||| |||||||    
T  10660521 taaagctcccgcatacgc-aggtcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttcc 10660426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 10874666 - 10874571
Alignment:
Q  126 taaagctcccgcatacgcaagatctgagaaggggtctcactat--ttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||||||| || |||  ||||||||||||| ||  || |||||||||| |||||| |||| | ||||||| | |||||| |||||||    
T  10874666 taaagctcccgcatacgc-aggtcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttcc 10874571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 11394983 - 11394950
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  11394983 ggcaacccggtgcactaaagctcccgcatacgca 11394950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 11404710 - 11404677
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  11404710 ggcaacccggtgcactaaagctcccgcatacgca 11404677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 28494276 - 28494223
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattt 170  Q
    ||||||||||| |||||||||||| ||| |||||| ||||||||| ||| ||||    
T  28494276 ccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccattt 28494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 35532123 - 35532090
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  35532123 ggcaacccggtgcactaaagctcccgcatacgca 35532090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 2813265 - 2813225
Alignment:
Q  105 acaaatggcaatccggtgcact-aaagctcccgcatacgca 144  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  2813265 acaaagggcaatccggtgcacttaaagctcccgcatacgca 2813225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 47441534 - 47441642
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    |||| ||||||| || |||||||| || ||| || | || | |||||||||  || |||| ||||||||||| |||||||||| || |||||| | ||||    
T  47441534 ggcagtccggtggacgaaagctcctgcttactcagggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaaga 47441633  T
Q  211 ggctgtttc 219  Q
    | |||||||    
T  47441634 gactgtttc 47441642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 51420644 - 51420596
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||| |||||||||| |||||| || |||||||| |||||||    
T  51420644 gtgtattgtacccagccttaccctgttttctacacaagaggttgtttcc 51420596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 7e-27; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 7879769 - 7879660
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||| ||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  7879769 ggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaaga 7879670  T
Q  211 ggctgtttcc 220  Q
    |  |||||||    
T  7879669 gattgtttcc 7879660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 2541029 - 2541132
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||||||||||||||| |  | | ||||||||| ||| |||| |||||| ||||||||||||||| ||||||||| ||||||||||||    
T  2541029 ccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgt 2541128  T
Q  217 ttcc 220  Q
    ||||    
T  2541129 ttcc 2541132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 23419688 - 23419794
Alignment:
Q  121 tgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||| |||||| ||||||| |||  ||||||||| ||| |||| ||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  23419688 tgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttcc 23419787  T
Q  221 ggaactt 227  Q
     ||||||    
T  23419788 agaactt 23419794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 42798800 - 42798691
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||| ||||||| |||||||||||| ||| | || | ||| ||||| ||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  42798800 ggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacacaaga 42798701  T
Q  211 ggctgtttcc 220  Q
    | ||||||||    
T  42798700 gactgtttcc 42798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 38604652 - 38604549
Alignment:
Q  117 ccggtgcact-aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    |||||||||| |||||||||||||||||| | || |  |||||||||||| |||| |||||||||||||||||||||| || |||||| |||||||||||    
T  38604652 ccggtgcacttaaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctg 38604554  T
Q  216 tttcc 220  Q
    |||||    
T  38604553 tttcc 38604549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 21172013 - 21172120
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  21172013 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 21172110  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  21172111 ggctgtttcc 21172120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 28362156 - 28362257
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||||||| ||||||||| |||| ||||| |||| ||||||||| ||| |||| ||||||||||||||||||||||  |||||||| ||||||||| ||    
T  28362156 ccggtgcac-aaagctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagt 28362254  T
Q  217 ttc 219  Q
    |||    
T  28362255 ttc 28362257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 1408588 - 1408479
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    |||||||||||| ||||||| | | ||||||||| | || | ||||||||| ||| ||||  |||||||||| |||||||||||||||||||| ||||||    
T  1408588 ggcaatccggtgaactaaagattctgcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaaga 1408489  T
Q  211 ggctgtttcc 220  Q
    |||| |||||    
T  1408488 ggctatttcc 1408479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 11617592 - 11617701
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||| ||| ||||||||| | ||   ||||||||| ||| |||| ||||||||||||||| |||||| ||||||||| ||||||    
T  11617592 ggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaaga 11617691  T
Q  211 ggctgtttcc 220  Q
    || |||||||    
T  11617692 ggttgtttcc 11617701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 42805657 - 42805546
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||| ||  | || | ||||||||| ||| |||  | ||||||||||| |||||||||| ||||||||| ||||    
T  42805657 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaa 42805558  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  42805557 gaggctgtttcc 42805546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 47716592 - 47716481
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| ||||||||| |||||||||||||| ||  | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| ||||    
T  47716592 ggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 47716493  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  47716492 gaggctgtttcc 47716481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 31591113 - 31591220
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||||| || | ||||||||| ||| ||||| ||||||||||||||||||||  | | ||||| ||||||    
T  31591113 ggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttac--tctgttttacacaaga 31591210  T
Q  211 ggctgtttcc 220  Q
    || |||||||    
T  31591211 ggttgtttcc 31591220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 32758390 - 32758283
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| ||||||||||| |||||||||| ||  ||||| ||||||    
T  32758390 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctg--ttttacacaaga 32758293  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  32758292 ggctgtttcc 32758283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 35787273 - 35787378
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||| | ||||||||||||||||||| || | ||||||||| | | |||| |||||||||||||| ||||||| || |||||| ||||||    
T  35787273 ggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatg-tttttacacaaga 35787371  T
Q  211 ggctgtt 217  Q
    |||||||    
T  35787372 ggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 42391104 - 42391211
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  42391104 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 42391201  T
Q  211 ggctgtttcc 220  Q
     |||||||||    
T  42391202 agctgtttcc 42391211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 48735126 - 48735233
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| ||||||||||||||||||||||  || ||||| ||||||    
T  48735126 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc--gtgttttacacaaga 48735223  T
Q  211 ggctgtttcc 220  Q
    || |||||||    
T  48735224 ggttgtttcc 48735233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 19426894 - 19427002
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||| |||||| |||||| ||| | || |||||||| || ||| |||| ||||||||||||||| |||||| | ||||||| ||||||    
T  19426894 ggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatttggtgtattgtacgcagtcttaccctattttttacacaaga 19426992  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  19426993 ggctgtttcc 19427002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 27629765 - 27629656
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||| ||||| ||||||| ||| |  | | ||||||||| ||| |||| ||||||| |||||| ||||||| ||||||||| ||||||    
T  27629765 ggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacacaaga 27629666  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  27629665 ggctgtttcc 27629656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 33871922 - 33872022
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    ||||||||||||||| ||||||| || | |||| ||||||||| ||| |||| |||||||||||||||||||| | || |||||| |||||||| |||||    
T  33871922 ggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-tttttacacaagaggttgttt 33872020  T
Q  219 cc 220  Q
    ||    
T  33872021 cc 33872022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 40464000 - 40463900
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    ||||||||| ||||||||||||||||| | || ||||||||||| ||| |||| ||||||| ||||||||||||||  | |||||| ||||||| |||||    
T  40464000 cggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccag-tttttacacaagagactgtt 40463902  T
Q  218 tc 219  Q
    ||    
T  40463901 tc 40463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 10693077 - 10693184
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| || |||||||| |||||||||||| ||| | || | ||||||||| ||| |||| ||||||||||||||||||||||   | ||||| ||||||    
T  10693077 ggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc--ctcttttacacaaga 10693174  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  10693175 ggctgtttcc 10693184  T

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Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 34626212 - 34626320
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||| || ||||||||||||||||||||| | || | |||||| || ||| |||| |||||||| ||||||||||||| || |||||| ||| ||    
T  34626212 ggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctg-tttttacacagga 34626310  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  34626311 ggctgtttcc 34626320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 38262200 - 38262309
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||||||||||||||||||||||||||||||||   |  | ||||||||| ||  |||| |||||||||| ||| | ||||| | ||||||| ||||||    
T  38262200 ggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacacaaga 38262299  T
Q  211 ggctgtttcc 220  Q
    | ||||||||    
T  38262300 gactgtttcc 38262309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 42476994 - 42476888
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    ||||||||| |||||||||||| |||    ||  ||||||||| ||| |||| |||||||||||||||||||||||||  ||||| ||||||| ||||||    
T  42476994 ggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttg--ttttacacaagagactgttt 42476897  T
Q  219 ccggaactt 227  Q
    || ||||||    
T  42476896 ccagaactt 42476888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 43557606 - 43557494
Alignment:
Q  111 ggcaatccggtgcactaaa-gctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaaca 207  Q
    ||||| ||||||||||||| |||||||||||||||   || | || |||||| ||| |||  | |||||||||||||||||||||  ||||||||| |||    
T  43557606 ggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacaca 43557507  T
Q  208 agaggctgtttcc 220  Q
    |||||||||||||    
T  43557506 agaggctgtttcc 43557494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 8148960 - 8149051
Alignment:
Q  121 tgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaa-acaagagg 212  Q
    ||||||||| ||| |||||||||||| |||| ||||||||| ||| |||| |||||||||||||| ||||||| | |||||||| ||||||||    
T  8148960 tgcactaaaactctcgcatacgcaag-tctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagagg 8149051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 18747612 - 18747508
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttg-ttttttaaacaagaggctg 215  Q
    |||||||||||||||||||||||||||| | |    ||||||||| ||| | || ||||||| |||||||||||||| || ||||||| |||| ||||||    
T  18747612 ccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctg 18747513  T
Q  216 tttcc 220  Q
    |||||    
T  18747512 tttcc 18747508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 2662943 - 2663046
Alignment:
Q  114 aatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggc 213  Q
    |||||||||| ||| |||||||||||| ||| | ||||| ||||| || ||| |||| ||||||||||||||||||||||   | ||||| |||||||||    
T  2662943 aatccggtgcgctagagctcccgcatatgcagggtctgaaaaggg-tcccaccatttggtgtattgtacgcagccttacc--ctattttacacaagaggc 2663039  T
Q  214 tgtttcc 220  Q
    |||||||    
T  2663040 tgtttcc 2663046  T

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Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 203
Target Start/End: Complemental strand, 19266564 - 19266489
Alignment:
Q  128 aagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttta 203  Q
    ||||||||||||||||| | || | |||||| || ||| |||| |||||||||||||||||||||| |||||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgtttttta 19266489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 27889320 - 27889399
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagcctt 190  Q
    ||||| |||||| || |||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||    
T  27889320 ggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctt 27889399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 18512457 - 18512539
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    ||||| || |||||| |||||||||||||||||| | || | ||||||||| ||| |||  ||||||||||||||||||||||    
T  18512457 ggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttacc 18512539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 23231681 - 23231579
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    ||||||||||||||| ||||||||||| | |  | ||||||||| ||  |||  ||||||| |||||||||||||||| | ||||| |||||||||| ||    
T  23231681 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctctt 23231582  T
Q  218 tcc 220  Q
    |||    
T  23231581 tcc 23231579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 35334826 - 35334912
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttta 203  Q
    |||||||||||||||||| ||||||||| | || | ||||||||| ||| |||  ||||||||||| ||| |||||| |||||||||    
T  35334826 ccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgtttttta 35334912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 46354264 - 46354216
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||    
T  46354264 gtgtattgtacgcagccttaccctgttttttacacaagaggttgtttcc 46354216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 16341348 - 16341301
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  16341348 gtgtattgtacgtagccttaccctgttttttacacaagaggctgtttc 16341301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 11741924 - 11741842
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    ||||| ||||||||||| |||||||||||  |||  ||| | |||||| || ||| |||| ||||||||||||||||||||||    
T  11741924 ggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttacc 11741842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 47077859 - 47077933
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgca 185  Q
    ||||||||||||||||| |||||||||||| | | | | || ||||||||| ||| |||| ||||||||||||||    
T  47077859 ggcaatccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgca 47077933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 19265938 - 19265863
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    ||||||||||||||||||| |||| | | | || | ||||||||| ||| |||| ||||||||||||||||||||||    
T  19265938 ccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttacc 19265863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 21566561 - 21566457
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcacta-tttagtgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    |||||||||||||||||||||||| ||| | |  | |||||||||  || | ||| ||||||||||||||| ||| |  ||||||||| ||||||||| |    
T  21566561 ccggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcgg 21566462  T
Q  216 tttcc 220  Q
    |||||    
T  21566461 tttcc 21566457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 14099052 - 14099119
Alignment:
Q  153 gaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||| ||| |||| ||||||||||||||| |||| | ||||||||| |||| ||||| |||||    
T  14099052 gaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttcc 14099119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 14409069 - 14409136
Alignment:
Q  153 gaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||| ||| |||| ||||||||||||||| |||| | ||||||||| |||| ||||| |||||    
T  14409069 gaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttcc 14409136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 23618981 - 23619052
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtac 182  Q
    ||||| ||| |||||||||||||| ||| ||||||| |||| ||||||||| ||| ||||  ||||||||||    
T  23618981 ggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtac 23619052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 25198856 - 25198766
Alignment:
Q  112 gcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttt 202  Q
    |||| ||||||||||||||||| | |||||| | | |||| |||||| ||  || |||||||| ||| ||||| | |||||||||||||||    
T  25198856 gcaacccggtgcactaaagctctcacatacgaagggtctgggaagggatcctaccatttagtgcattatacgcggtcttaccttgtttttt 25198766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 48123531 - 48123597
Alignment:
Q  154 aaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||| ||| |||| |||||||||| ||||  ||||| |||| |||| ||||||||||||||||    
T  48123531 aaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttcc 48123597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 7645066 - 7644978
Alignment:
Q  132 tcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||||| | || | ||||||||| ||| |||| | ||||||||||||   |||||| ||||||||| ||||||||||||||||    
T  7645066 tcccgcatacgcagggtcag-gaaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttcc 7644978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 36602578 - 36602545
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgca 144  Q
    ||||| ||||||||||||||||||||||||||||    
T  36602578 ggcaacccggtgcactaaagctcccgcatacgca 36602545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 15108443 - 15108491
Alignment:
Q  153 gaaggggtctcactatttagtgtattgtacgcagccttaccttgttttt 201  Q
    |||||| || ||||||||  |||||||||| ||||||||||||||||||    
T  15108443 gaagggatcccactatttgatgtattgtacacagccttaccttgttttt 15108491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 22699035 - 22699083
Alignment:
Q  172 gtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    ||||||||||||||| |||||| ||||||||| ||||||| || |||||    
T  22699035 gtgtattgtacgcagtcttaccctgttttttacacaagagactatttcc 22699083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 16880657 - 16880757
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    |||||||||||||||||||||||||||| | || | |||| |||| ||| |||| |||||||||||||||||||||| ||||||||| ||||||||||||    
T  16880657 ccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgt 16880756  T
Q  217 t 217  Q
    |    
T  16880757 t 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 38879714 - 38879603
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| ||||    
T  38879714 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaa 38879615  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  38879614 gaggctgtttcc 38879603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 24449021 - 24448912
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||| ||||||||| | || | ||||||||| ||| |||| |||||||||||||||||||||| | ||||||| |||| |    
T  24449021 ggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctattttttacacaaaa 24448922  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  24448921 ggctgtttcc 24448912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 7097772 - 7097870
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||||||||||||||| | |  | ||||||||||||| |||| |||||||||||||| ||||||| || |||||| ||||||||||||||    
T  7097772 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctg-tttttacacaagaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 32703553 - 32703446
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  32703553 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 32703456  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  32703455 ggctgtttcc 32703446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 41014449 - 41014341
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||||||||| ||  | ||   ||||||||| ||| |||| |||||||||||||||||||||| || |||||| ||||||    
T  41014449 ggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaaga 41014351  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  41014350 ggctgtttcc 41014341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 20135737 - 20135626
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| |||||||||| ||||||| ||||| ||  | || | ||||||||| ||| |||  | |||||||||||||||||||||||||||||||| ||||    
T  20135737 ggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacaa 20135638  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  20135637 gaggctgtttcc 20135626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 27328885 - 27328774
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||||||| |||| ||||||||||||||||||| | |  | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| ||||    
T  27328885 ggcaatccgatgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 27328786  T
Q  209 gaggctgtttcc 220  Q
    ||| ||||||||    
T  27328785 gagactgtttcc 27328774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 29334521 - 29334417
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt-tagtgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    |||||||| ||||| |||| |||||||| | || | ||| ||||| ||| ||| | |||||||||||||||||||||||||||||||| |||||||||||    
T  29334521 ccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttacacaagaggctg 29334422  T
Q  216 tttcc 220  Q
    |||||    
T  29334421 tttcc 29334417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 43574731 - 43574628
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgt 216  Q
    ||||||| |||||||||||||||||||| | || | ||||||||| ||| |||| || ||||||||||||||||||| |||||| || |||||||  |||    
T  43574731 ccggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgt 43574632  T
Q  217 ttcc 220  Q
    ||||    
T  43574631 ttcc 43574628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 4619108 - 4619219
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| ||||||||||||||||| |||||| ||  | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| ||||    
T  4619108 ggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 4619207  T
Q  209 gaggctgtttcc 220  Q
    |||||| |||||    
T  4619208 gaggctatttcc 4619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 13801771 - 13801882
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatt--tagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| ||||||||||||||||| |||||| ||  | || | ||||||||| ||| |||  | |||||||||||||||||||||| ||||||||| ||||    
T  13801771 ggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaa 13801870  T
Q  209 gaggctgtttcc 220  Q
    ||||||| ||||    
T  13801871 gaggctgcttcc 13801882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 19142956 - 19143055
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    |||||||||| |||||||||||||| | || | ||||||||| ||| |||| ||||| |||||||||||||||| || |||||| |||||||| ||||||    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctg-tttttacacaagaggttgtttc 19143054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 7368527 - 7368420
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| ||||||| |||| ||| | || | ||||||||| ||| | || |||||||||||||||||||||| ||  ||||| ||||||    
T  7368527 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctg--ttttacacaaga 7368430  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  7368429 ggctgtttcc 7368420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 8169988 - 8170095
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||| || |||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| |||| |    
T  8169988 ggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaaa 8170085  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  8170086 ggctgtttcc 8170095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 35710442 - 35710335
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||| |||||||||||||   | ||||| ||||||    
T  35710442 ggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttacc--ctattttacacaaga 35710345  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  35710344 ggctgtttcc 35710335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 2838890 - 2838802
Alignment:
Q  130 gctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    ||||||||||||||| | || |||||||| || ||| |||| |||||||||||||||||||||| || |||||| |||||| ||||||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagatgctgtttc 2838802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 43334335 - 43334224
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttg-ttttttaaaca 207  Q
    ||||| ||||||||||||||||||||||| |||| | || | ||||||||| ||| ||||   |||||||||||||||||||||| || ||||||| |||    
T  43334335 ggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacaca 43334237  T
Q  208 agaggctgtttcc 220  Q
     ||||||||||||    
T  43334236 ggaggctgtttcc 43334224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 16957445 - 16957374
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtac 182  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||    
T  16957445 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 34154818 - 34154900
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    ||||| ||||||||||| |||| ||||||| ||| | || | ||||||||| ||| |||| ||||||||||||||||||||||    
T  34154818 ggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc 34154900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 12006339 - 12006443
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactat--ttagtgtattgtacgcagccttaccttgttttttaaacaagaggctg 215  Q
    ||||||||||||||||||||||| ||| | |||| ||||||||| ||| ||  || |||||||||| | ||||||||| | ||||||| | |||||| ||    
T  12006339 cggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttacataagaggttg 12006438  T
Q  216 tttcc 220  Q
    |||||    
T  12006439 tttcc 12006443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 22600569 - 22600488
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    |||||||||||||||||| |||| | |||||| || ||| |||| ||||||||||| |||||||||| ||| ||||| ||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaa 22600488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 24323725 - 24323825
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttccggaact 226  Q
    ||||||||||||||  || | |||| ||||||||| |||||||| | ||||| ||||||  |||||| ||| ||||| |||||||| ||||||| |||||    
T  24323725 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaact 24323824  T
Q  227 t 227  Q
    |    
T  24323825 t 24323825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 24360349 - 24360449
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttccggaact 226  Q
    ||||||||||||||  || | |||| ||||||||| |||||||| | ||||| ||||||  |||||| ||| ||||| |||||||| ||||||| |||||    
T  24360349 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttccagaact 24360448  T
Q  227 t 227  Q
    |    
T  24360449 t 24360449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 25622596 - 25622541
Alignment:
Q  106 caaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtc 161  Q
    |||| |||||||||||||||||||||||||||||||||| | || | |||||||||    
T  25622596 caaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 25622541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 9794385 - 9794471
Alignment:
Q  114 aatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    ||||||||||||||||||| | ||||| ||  | |||| |||||| || |||||||| |||||||||| |||| |||||| ||||||    
T  9794385 aatccggtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 22187408 - 22187307
Alignment:
Q  121 tgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||||||||| ||||| | | | | || |||||||||||| | |||   ||||||||||||||| |||| | ||||||||| ||||||||||||||    
T  22187408 tgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgttt 22187309  T
Q  219 cc 220  Q
    ||    
T  22187308 cc 22187307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 28516449 - 28516547
Alignment:
Q  123 cactaaagctcccgcatacgcaagatctgagaaggggtctcactatttag-tgtattgtacgcagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||||| |||| |||| | |||| ||| ||||| ||| |||| | |||||||||||||||| || | ||||||||| |||||||| |||||||    
T  28516449 cactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttcc 28516547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 39801651 - 39801597
Alignment:
Q  107 aaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtc 161  Q
    ||||||||| |||||||||||||||||||||||||| | | |||| |||||||||    
T  39801651 aaatggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtc 39801597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 41426042 - 41425963
Alignment:
Q  148 tctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttccggaactt 227  Q
    |||| ||||||||| ||| | || |||||||||| ||||||||||| ||||||||| |||| | | ||||||| ||||||    
T  41426042 tctgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaactt 41425963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 29184065 - 29184111
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaagg 157  Q
    ||||| |||||||||||||||||||||||||||| | ||||| ||||    
T  29184065 ggcaacccggtgcactaaagctcccgcatacgcatggtctgacaagg 29184111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 3771464 - 3771379
Alignment:
Q  117 ccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttttt 202  Q
    ||||||||||||||||||| ||||| ||   || | ||||||||| ||| | || ||||||||| | |||||||||| ||||||||    
T  3771464 ccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgttcacagccttaccctgtttttt 3771379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 12477132 - 12477205
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcacta-tttagtgtattgtacgcagcctta 191  Q
    |||||||||||||||  |||||||||  ||| | ||||||||| ||| | ||| ||||||||||||||||||||    
T  12477132 ggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccaccattttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 22025601 - 22025565
Alignment:
Q  184 cagccttaccttgttttttaaacaagaggctgtttcc 220  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  22025601 cagccttaccctgttttttacacaagaggctgtttcc 22025565  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 34074622 - 34074674
Alignment:
Q  167 atttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtttc 219  Q
    |||| |||||||| ||||| ||||||  ||||||||| |||||||||||||||    
T  34074622 atttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttc 34074674  T

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Target: scaffold0258 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 13028 - 13136
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||||||| |||||||||||| | |||| ||||||||| ||| |||  ||||||||||||||||||||||||| ||||||  |||||    
T  13028 ggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttg-tttttacgcaaga 13126  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  13127 ggctgtttcc 13136  T

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Target: scaffold0057 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 46962 - 46853
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| |||||||||||||||||||||||||||| | || | ||||||||| ||| |||| |||||||||||||| ||||||| | ||||||| ||||||    
T  46962 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacacaaga 46863  T
Q  211 ggctgtttcc 220  Q
    || |||||||    
T  46862 ggttgtttcc 46853  T

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Target: scaffold0057; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 217
Target Start/End: Original strand, 24786 - 24882
Alignment:
Q  121 tgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    |||||||||||||||||||||||| | |  | ||||||||| ||| |||| |||| ||||||||||||||||| ||||||||| |||||||||||||    
T  24786 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt 24882  T

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Target: scaffold0057; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 43780 - 43674
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaa-ggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    |||||||| |||||||||||| ||| | || ||||| |||||| ||| |||| |||||||||||||||||||||||||  ||||| |||||| |||||||    
T  43780 gtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttg--ttttacacaagacgctgttt 43683  T
Q  219 ccggaactt 227  Q
    || ||||||    
T  43682 ccagaactt 43674  T

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Target: scaffold0049 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 59110 - 58999
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactattta--gtgtattgtacgcagccttaccttgttttttaaacaa 208  Q
    ||||| ||| ||||||||||||||||||||||||   |||| ||||||||| ||| ||||   ||||||||||||||| |||||| ||||||||| ||||    
T  59110 ggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaa 59011  T
Q  209 gaggctgtttcc 220  Q
    ||||||||||||    
T  59010 gaggctgtttcc 58999  T

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Target: scaffold0311 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 10932 - 10834
Alignment:
Q  120 gtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    ||||||||||||||||||||||||| | || | ||||||||| ||| |||| |||||||| |||||||| |||| ||||||||| |||||||| |||||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttt 10834  T

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Target: scaffold0015 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 48638 - 48745
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| |||||||||||||||||||||| ||  ||||| ||||||    
T  48638 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaaga 48735  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  48736 ggctgtttcc 48745  T

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Target: scaffold0180 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 24137 - 24219
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttacc 193  Q
    ||||||||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| ||||||||||||||||||||||    
T  24137 ggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc 24219  T

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Target: scaffold0168 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 30708 - 30601
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||| |||||||||||| ||| | || | ||||||||| ||| |||| ||||||||||||||||| |||| ||  ||||| ||||||    
T  30708 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctg--ttttacacaaga 30611  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  30610 ggctgtttcc 30601  T

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Target: scaffold0018 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 72866 - 72971
Alignment:
Q  106 caaatggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaa 205  Q
    |||| ||||| | |||||||||||||||||||||||||| | || | ||||||||   || |||| |||||||||| ||||||||||| ||||||||| |    
T  72866 caaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttaca 72965  T
Q  206 caagag 211  Q
    ||||||    
T  72966 caagag 72971  T

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Target: scaffold0954 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 3668 - 3566
Alignment:
Q  118 cggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgtt 217  Q
    ||||||||||||||| ||||||||||| | |  | ||||||||| ||  |||  ||||||| |||||||||||||||| | ||||| |||||||||| ||    
T  3668 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctctt 3569  T
Q  218 tcc 220  Q
    |||    
T  3568 tcc 3566  T

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Target: scaffold0223 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 11252 - 11153
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    ||||||||| |||||||||||| ||| | || | ||||| ||| ||| |||| |||||||||| |||||||||| |||  ||||| ||||||||||||||    
T  11252 ggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttactttg--ttttacacaagaggctgttt 11155  T

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Target: scaffold0187 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 10054 - 10161
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||  |||||| ||||| ||| | || | ||||||||| |||||||| ||||||||||||||| |||||  | | ||||| ||||||    
T  10054 ggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttac--tctgttttacacaaga 10151  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  10152 ggctgtttcc 10161  T

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Target: scaffold0187; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 20382 - 20489
Alignment:
Q  111 ggcaatccggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaaga 210  Q
    ||||| ||||||||||  |||||| ||||| ||| | || | ||||||||| |||||||| ||||||||||||||| |||||  | | ||||| ||||||    
T  20382 ggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttac--tctgttttacacaaga 20479  T
Q  211 ggctgtttcc 220  Q
    ||||||||||    
T  20480 ggctgtttcc 20489  T

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Target: scaffold0167 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 23714 - 23623
Alignment:
Q  127 aaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgttttttaaacaagaggctgttt 218  Q
    ||||||||| ||||| |||| |||| ||||||||| ||| ||||  |  |||||||||||||| ||| ||||||||| |||||||| |||||    
T  23714 aaagctcccacatactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgttt 23623  T

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Target: scaffold1176 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 1599 - 1680
Alignment:
Q  119 ggtgcactaaagctcccgcatacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    |||||||||||||||||||||||||  | || | ||||||||| ||  |||| |||||||||| ||||||||| | ||||||    
T  1599 ggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgtttt 1680  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 35048 - 35110
Alignment:
Q  138 atacgcaagatctgagaaggggtctcactatttagtgtattgtacgcagccttaccttgtttt 200  Q
    ||||||||||||   ||| ||||| ||| |||| |||||||||||||||||||||| ||||||    
T  35048 atacgcaagatccaggaaagggtcccaccatttggtgtattgtacgcagccttaccctgtttt 35110  T

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