View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13686_low_28 (Length: 232)

Name: NF13686_low_28
Description: NF13686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13686_low_28
NF13686_low_28
[»] chr3 (69 HSPs)
chr3 (1-226)||(33235545-33235769)
chr3 (84-219)||(12914036-12914171)
chr3 (84-207)||(40272813-40272936)
chr3 (95-207)||(6411834-6411945)
chr3 (83-207)||(22609799-22609922)
chr3 (84-220)||(13628791-13628929)
chr3 (84-220)||(39203536-39203670)
chr3 (84-220)||(26869727-26869862)
chr3 (83-194)||(31904856-31904968)
chr3 (85-220)||(26573147-26573282)
chr3 (84-194)||(54484736-54484847)
chr3 (84-207)||(14986990-14987115)
chr3 (96-220)||(34420656-34420781)
chr3 (84-207)||(10795424-10795549)
chr3 (84-218)||(46421035-46421172)
chr3 (84-220)||(516429-516568)
chr3 (84-220)||(1217110-1217244)
chr3 (84-218)||(29366721-29366857)
chr3 (84-194)||(45786215-45786327)
chr3 (84-220)||(53996566-53996703)
chr3 (103-207)||(55401209-55401314)
chr3 (87-194)||(7943036-7943143)
chr3 (84-217)||(13730603-13730738)
chr3 (95-217)||(45948850-45948972)
chr3 (87-220)||(54374349-54374483)
chr3 (84-194)||(49013474-49013586)
chr3 (81-220)||(22122915-22123052)
chr3 (84-207)||(31592882-31593003)
chr3 (85-220)||(8247688-8247826)
chr3 (132-217)||(4495713-4495798)
chr3 (102-191)||(9276313-9276401)
chr3 (84-191)||(15797271-15797376)
chr3 (83-194)||(31672739-31672851)
chr3 (133-194)||(47624088-47624148)
chr3 (132-217)||(54032608-54032693)
chr3 (85-182)||(353351-353450)
chr3 (84-176)||(34771365-34771457)
chr3 (95-190)||(19731052-19731147)
chr3 (84-194)||(25517171-25517282)
chr3 (84-194)||(16735487-16735596)
chr3 (84-158)||(24578007-24578081)
chr3 (84-220)||(25944489-25944626)
chr3 (97-208)||(43114882-43114995)
chr3 (136-220)||(45620881-45620966)
chr3 (84-168)||(52926220-52926304)
chr3 (84-220)||(5173720-5173857)
chr3 (100-220)||(9607223-9607345)
chr3 (95-190)||(19751628-19751723)
chr3 (84-220)||(45139479-45139615)
chr3 (133-191)||(52428527-52428585)
chr3 (168-216)||(35417940-35417988)
chr3 (95-190)||(44403567-44403663)
chr3 (133-220)||(30928197-30928284)
chr3 (83-122)||(31922839-31922878)
chr3 (141-218)||(7696945-7697020)
chr3 (158-220)||(12525427-12525489)
chr3 (84-158)||(24577917-24577991)
chr3 (143-207)||(21875046-21875111)
chr3 (156-220)||(10870025-10870088)
chr3 (133-220)||(33926103-33926190)
chr3 (149-188)||(39212042-39212081)
chr3 (75-118)||(47624221-47624264)
chr3 (84-118)||(4495677-4495711)
chr3 (84-118)||(10484617-10484651)
chr3 (84-118)||(40390363-40390397)
chr3 (84-118)||(54032572-54032606)
chr3 (134-182)||(8410918-8410966)
chr3 (84-116)||(24851302-24851334)
chr3 (134-194)||(52952532-52952592)
[»] chr1 (70 HSPs)
chr1 (84-220)||(46247954-46248090)
chr1 (97-217)||(23768334-23768454)
chr1 (84-220)||(34725099-34725233)
chr1 (84-220)||(18944664-18944803)
chr1 (84-220)||(32632558-32632693)
chr1 (84-220)||(10668246-10668384)
chr1 (84-220)||(35005144-35005282)
chr1 (84-180)||(4349699-4349795)
chr1 (84-220)||(14617059-14617195)
chr1 (84-220)||(27474302-27474437)
chr1 (86-217)||(46991828-46991959)
chr1 (84-217)||(20004091-20004226)
chr1 (84-217)||(30395727-30395862)
chr1 (84-220)||(27201668-27201806)
chr1 (95-217)||(6925124-6925246)
chr1 (94-220)||(18724557-18724682)
chr1 (84-220)||(38478283-38478417)
chr1 (84-220)||(41319807-41319943)
chr1 (86-207)||(45402128-45402251)
chr1 (84-194)||(35253188-35253296)
chr1 (84-189)||(1517312-1517418)
chr1 (95-220)||(45264411-45264537)
chr1 (87-220)||(45812541-45812672)
chr1 (84-220)||(47214532-47214666)
chr1 (75-194)||(31382206-31382324)
chr1 (84-194)||(23796512-23796622)
chr1 (137-186)||(4430080-4430129)
chr1 (84-220)||(6983812-6983946)
chr1 (84-178)||(18741958-18742054)
chr1 (92-194)||(19701617-19701720)
chr1 (105-220)||(25468285-25468400)
chr1 (95-220)||(2435798-2435924)
chr1 (86-176)||(10378738-10378828)
chr1 (148-194)||(17470411-17470457)
chr1 (85-184)||(19932755-19932856)
chr1 (84-189)||(8197095-8197200)
chr1 (84-220)||(19414460-19414594)
chr1 (95-220)||(35019251-35019375)
chr1 (84-220)||(9939482-9939621)
chr1 (138-194)||(34679274-34679330)
chr1 (95-178)||(46859129-46859213)
chr1 (103-194)||(11596560-11596650)
chr1 (96-194)||(12126850-12126946)
chr1 (84-175)||(43768205-43768296)
chr1 (103-194)||(44485129-44485220)
chr1 (103-173)||(15505632-15505702)
chr1 (97-194)||(43207542-43207640)
chr1 (85-207)||(22324927-22325049)
chr1 (95-220)||(35117777-35117905)
chr1 (86-218)||(39214961-39215094)
chr1 (100-220)||(18335305-18335425)
chr1 (140-220)||(24564365-24564445)
chr1 (84-177)||(42304208-42304303)
chr1 (85-220)||(15511150-15511288)
chr1 (84-190)||(20999851-20999957)
chr1 (89-207)||(30682848-30682963)
chr1 (133-193)||(27136701-27136762)
chr1 (148-220)||(52910238-52910311)
chr1 (148-216)||(50760291-50760359)
chr1 (137-220)||(31272429-31272511)
chr1 (129-194)||(19656151-19656217)
chr1 (133-194)||(33223031-33223092)
chr1 (84-146)||(50606498-50606560)
chr1 (155-220)||(22327120-22327185)
chr1 (95-220)||(23371145-23371268)
chr1 (133-194)||(34149010-34149071)
chr1 (133-220)||(20036241-20036329)
chr1 (150-194)||(20169156-20169200)
chr1 (133-177)||(21910699-21910743)
chr1 (164-192)||(25290214-25290242)
[»] chr7 (57 HSPs)
chr7 (81-220)||(11617586-11617725)
chr7 (84-219)||(2541020-2541155)
chr7 (84-218)||(23419675-23419809)
chr7 (75-219)||(19426882-19427025)
chr7 (75-217)||(7879639-7879781)
chr7 (84-220)||(21172010-21172144)
chr7 (84-220)||(31591110-31591244)
chr7 (84-220)||(32758259-32758393)
chr7 (84-217)||(42798670-42798803)
chr7 (84-219)||(27629633-27629768)
chr7 (87-220)||(33871914-33872046)
chr7 (84-220)||(42391101-42391235)
chr7 (84-217)||(42805525-42805660)
chr7 (84-217)||(47716460-47716595)
chr7 (84-220)||(10693074-10693208)
chr7 (103-220)||(28362165-28362282)
chr7 (85-217)||(35334818-35334948)
chr7 (84-193)||(35787270-35787378)
chr7 (75-220)||(43557470-43557618)
chr7 (84-220)||(19265813-19265947)
chr7 (84-220)||(34626209-34626344)
chr7 (98-217)||(42101899-42102019)
chr7 (84-187)||(22698968-22699074)
chr7 (84-194)||(42476897-42477005)
chr7 (133-220)||(48123534-48123621)
chr7 (84-194)||(48735123-48735231)
chr7 (84-190)||(14099008-14099113)
chr7 (84-190)||(14409025-14409130)
chr7 (85-219)||(18512455-18512588)
chr7 (84-220)||(29907417-29907552)
chr7 (84-194)||(40463901-40464010)
chr7 (78-194)||(16341302-16341419)
chr7 (84-220)||(18747484-18747621)
chr7 (148-220)||(7644954-7645026)
chr7 (95-214)||(21566439-21566559)
chr7 (102-194)||(38604551-38604642)
chr7 (133-217)||(46354195-46354281)
chr7 (130-207)||(2662982-2663057)
chr7 (84-181)||(23618978-23619075)
chr7 (84-214)||(8148947-8149077)
chr7 (104-207)||(19266461-19266564)
chr7 (84-162)||(27889317-27889395)
chr7 (95-220)||(47077867-47077990)
chr7 (133-190)||(1408485-1408542)
chr7 (151-220)||(35203437-35203506)
chr7 (84-217)||(38262197-38262330)
chr7 (88-194)||(25198749-25198856)
chr7 (148-194)||(5180222-5180268)
chr7 (75-220)||(11741793-11741936)
chr7 (84-118)||(45018924-45018958)
chr7 (148-220)||(12473302-12473374)
chr7 (173-220)||(1524276-1524323)
chr7 (95-190)||(23231585-23231680)
chr7 (138-220)||(6736888-6736969)
chr7 (84-118)||(36602547-36602581)
chr7 (136-220)||(32233188-32233271)
chr7 (98-175)||(33500556-33500635)
[»] chr8 (52 HSPs)
chr8 (84-217)||(36720797-36720930)
chr8 (84-217)||(28817627-28817760)
chr8 (82-194)||(45071289-45071400)
chr8 (88-217)||(29521690-29521819)
chr8 (85-194)||(29877118-29877227)
chr8 (84-217)||(44530150-44530283)
chr8 (84-219)||(2626518-2626656)
chr8 (84-220)||(39460995-39461133)
chr8 (82-220)||(22598155-22598292)
chr8 (84-194)||(35261703-35261813)
chr8 (84-194)||(12625913-12626024)
chr8 (84-194)||(13160726-13160835)
chr8 (84-220)||(12670251-12670385)
chr8 (84-217)||(26954133-26954269)
chr8 (84-217)||(6760823-6760958)
chr8 (84-219)||(17823575-17823710)
chr8 (87-220)||(18164764-18164896)
chr8 (84-220)||(30454098-30454232)
chr8 (95-207)||(5689642-5689754)
chr8 (95-207)||(8483950-8484062)
chr8 (84-207)||(5135291-5135413)
chr8 (84-194)||(10857852-10857963)
chr8 (84-194)||(8897765-8897875)
chr8 (75-194)||(20869947-20870068)
chr8 (134-220)||(14018019-14018106)
chr8 (84-192)||(16225045-16225155)
chr8 (84-207)||(7136528-7136653)
chr8 (89-220)||(20284075-20284210)
chr8 (103-194)||(24365079-24365171)
chr8 (84-217)||(25250523-25250658)
chr8 (84-220)||(31457171-31457306)
chr8 (89-220)||(21070703-21070839)
chr8 (96-220)||(44781517-44781643)
chr8 (86-183)||(44742521-44742619)
chr8 (95-219)||(389642-389768)
chr8 (96-191)||(17250888-17250985)
chr8 (132-192)||(23286374-23286432)
chr8 (95-184)||(40604918-40605006)
chr8 (133-194)||(43942348-43942411)
chr8 (134-220)||(35105921-35106008)
chr8 (84-146)||(28407475-28407537)
chr8 (151-220)||(11748297-11748366)
chr8 (148-220)||(20869563-20869633)
chr8 (84-157)||(26102578-26102651)
chr8 (84-161)||(16013511-16013590)
chr8 (96-176)||(19729382-19729462)
chr8 (157-220)||(30962847-30962910)
chr8 (84-194)||(23000229-23000329)
chr8 (84-118)||(27468093-27468127)
chr8 (143-220)||(36918122-36918199)
chr8 (82-118)||(27508010-27508046)
chr8 (133-220)||(42083748-42083836)
[»] chr2 (54 HSPs)
chr2 (84-217)||(8455317-8455450)
chr2 (84-207)||(9671192-9671313)
chr2 (92-220)||(32781298-32781425)
chr2 (84-220)||(10543696-10543834)
chr2 (84-220)||(10546160-10546297)
chr2 (84-217)||(11514437-11514569)
chr2 (84-217)||(14444730-14444862)
chr2 (84-220)||(14530316-14530454)
chr2 (84-194)||(40762235-40762345)
chr2 (84-194)||(36871517-36871625)
chr2 (84-183)||(25632544-25632643)
chr2 (84-220)||(21779262-21779396)
chr2 (84-220)||(23397764-23397898)
chr2 (133-220)||(12023969-12024055)
chr2 (129-220)||(23145744-23145835)
chr2 (129-220)||(23557534-23557625)
chr2 (84-220)||(24200624-24200762)
chr2 (75-217)||(25249730-25249871)
chr2 (84-194)||(30826061-30826169)
chr2 (84-217)||(17668003-17668136)
chr2 (84-219)||(19977715-19977850)
chr2 (84-194)||(14544087-14544200)
chr2 (95-194)||(31158451-31158552)
chr2 (86-194)||(4516354-4516462)
chr2 (84-194)||(17896283-17896394)
chr2 (133-220)||(21377123-21377210)
chr2 (84-194)||(25079718-25079829)
chr2 (84-194)||(39914307-39914417)
chr2 (99-220)||(99281-99400)
chr2 (84-194)||(17623588-17623698)
chr2 (84-178)||(44643563-44643657)
chr2 (84-193)||(27573646-27573754)
chr2 (84-217)||(40416872-40417005)
chr2 (133-220)||(5450283-5450371)
chr2 (87-220)||(7214532-7214667)
chr2 (86-220)||(45235820-45235955)
chr2 (102-220)||(44521392-44521510)
chr2 (84-194)||(5841052-5841164)
chr2 (151-220)||(19614990-19615059)
chr2 (133-216)||(22371059-22371139)
chr2 (143-219)||(12315712-12315787)
chr2 (164-220)||(29419970-29420026)
chr2 (95-220)||(26684632-26684759)
chr2 (96-178)||(24890451-24890533)
chr2 (103-220)||(33795283-33795400)
chr2 (84-169)||(13245096-13245181)
chr2 (95-194)||(17471572-17471673)
chr2 (133-220)||(31821393-31821478)
chr2 (81-117)||(40579747-40579783)
chr2 (151-194)||(15296475-15296518)
chr2 (95-162)||(24860000-24860067)
chr2 (84-118)||(8575995-8576029)
chr2 (84-118)||(22371212-22371246)
chr2 (148-217)||(17705496-17705565)
[»] scaffold0049 (1 HSPs)
scaffold0049 (84-220)||(58975-59113)
[»] chr6 (37 HSPs)
chr6 (84-220)||(29355856-29355994)
chr6 (84-220)||(12221915-12222054)
chr6 (84-220)||(1354758-1354892)
chr6 (84-220)||(9161121-9161258)
chr6 (84-220)||(1346962-1347096)
chr6 (84-220)||(32728158-32728293)
chr6 (90-220)||(3815084-3815214)
chr6 (84-218)||(18277194-18277328)
chr6 (130-220)||(20400665-20400755)
chr6 (96-220)||(7947384-7947509)
chr6 (133-197)||(1941876-1941940)
chr6 (84-220)||(2166411-2166549)
chr6 (84-220)||(2178044-2178182)
chr6 (84-194)||(26097184-26097292)
chr6 (84-194)||(25557749-25557857)
chr6 (148-194)||(6024257-6024303)
chr6 (96-220)||(23240837-23240959)
chr6 (130-207)||(33138844-33138921)
chr6 (148-220)||(12889424-12889496)
chr6 (84-220)||(24097579-24097711)
chr6 (150-220)||(8409241-8409311)
chr6 (84-162)||(12885967-12886047)
chr6 (144-185)||(24751135-24751176)
chr6 (90-207)||(32579437-32579553)
chr6 (84-160)||(383761-383837)
chr6 (105-218)||(14553511-14553626)
chr6 (129-220)||(13905026-13905116)
chr6 (84-220)||(17432338-17432482)
chr6 (133-218)||(28007628-28007711)
chr6 (96-220)||(15866052-15866174)
chr6 (84-161)||(23930128-23930205)
chr6 (75-164)||(3116121-3116212)
chr6 (159-194)||(9671161-9671196)
chr6 (84-155)||(13267788-13267859)
chr6 (75-117)||(6808496-6808538)
chr6 (84-116)||(12892111-12892143)
chr6 (143-194)||(13628316-13628368)
[»] chr5 (44 HSPs)
chr5 (74-217)||(24448891-24449034)
chr5 (84-220)||(38879579-38879717)
chr5 (84-193)||(16880648-16880757)
chr5 (84-220)||(32703422-32703556)
chr5 (84-220)||(28516434-28516571)
chr5 (84-217)||(41014320-41014452)
chr5 (97-220)||(27328750-27328875)
chr5 (84-217)||(4619105-4619240)
chr5 (84-219)||(8169985-8170118)
chr5 (84-220)||(43334200-43334338)
chr5 (84-194)||(7097761-7097870)
chr5 (84-191)||(13801768-13801877)
chr5 (84-220)||(35710311-35710445)
chr5 (96-212)||(19142956-19143071)
chr5 (95-187)||(43574637-43574729)
chr5 (84-194)||(29334419-29334530)
chr5 (87-194)||(30006349-30006456)
chr5 (86-194)||(7368422-7368528)
chr5 (84-194)||(20135628-20135740)
chr5 (84-220)||(22187283-22187421)
chr5 (83-194)||(12006328-12006441)
chr5 (84-158)||(16957374-16957448)
chr5 (106-194)||(2838803-2838890)
chr5 (84-172)||(34154815-34154903)
chr5 (148-220)||(42924899-42924971)
chr5 (141-220)||(34074620-34074699)
chr5 (129-217)||(1405188-1405276)
chr5 (87-143)||(39801591-39801647)
chr5 (134-193)||(36770806-36770864)
chr5 (133-184)||(41425982-41426033)
chr5 (133-218)||(208977-209062)
chr5 (103-184)||(22600488-22600569)
chr5 (133-194)||(22907915-22907975)
chr5 (77-118)||(29184055-29184096)
chr5 (164-220)||(22025541-22025597)
chr5 (153-220)||(37024626-37024691)
chr5 (103-194)||(24323725-24323816)
chr5 (103-194)||(24360349-24360440)
chr5 (82-116)||(19438768-19438802)
chr5 (84-182)||(31694109-31694207)
chr5 (95-176)||(9794390-9794471)
chr5 (133-194)||(24903746-24903807)
chr5 (84-145)||(25622533-25622594)
chr5 (84-117)||(32354228-32354261)
[»] chr4 (73 HSPs)
chr4 (84-194)||(20639659-20639770)
chr4 (82-220)||(6430625-6430762)
chr4 (86-220)||(17043398-17043531)
chr4 (84-194)||(14983858-14983968)
chr4 (84-194)||(25629073-25629183)
chr4 (84-217)||(5648260-5648392)
chr4 (84-217)||(16408602-16408737)
chr4 (84-220)||(44363131-44363269)
chr4 (84-219)||(47443956-47444091)
chr4 (86-217)||(21646965-21647098)
chr4 (95-197)||(51865050-51865152)
chr4 (84-220)||(47528531-47528665)
chr4 (84-220)||(48598826-48598960)
chr4 (84-220)||(30639378-30639513)
chr4 (81-217)||(40915830-40915965)
chr4 (84-192)||(23501813-23501923)
chr4 (84-220)||(9832314-9832448)
chr4 (84-220)||(11054149-11054283)
chr4 (95-220)||(19027846-19027971)
chr4 (84-220)||(20224982-20225116)
chr4 (85-220)||(29207900-29208033)
chr4 (84-220)||(35567168-35567304)
chr4 (84-179)||(30690177-30690272)
chr4 (97-220)||(37494849-37494972)
chr4 (84-220)||(5306661-5306800)
chr4 (84-186)||(12711450-12711553)
chr4 (84-194)||(20405110-20405223)
chr4 (84-194)||(16911586-16911698)
chr4 (83-194)||(7909280-7909391)
chr4 (83-207)||(8473620-8473744)
chr4 (83-194)||(21489111-21489223)
chr4 (92-220)||(25463120-25463247)
chr4 (84-194)||(54175088-54175199)
chr4 (95-194)||(9987846-9987945)
chr4 (84-175)||(55766467-55766558)
chr4 (84-175)||(55830722-55830813)
chr4 (84-190)||(13256400-13256508)
chr4 (129-186)||(17079697-17079754)
chr4 (134-194)||(39029111-39029172)
chr4 (148-220)||(7038051-7038122)
chr4 (96-220)||(41018807-41018930)
chr4 (129-220)||(7385522-7385613)
chr4 (104-194)||(49796822-49796911)
chr4 (86-220)||(54967019-54967151)
chr4 (136-220)||(487187-487272)
chr4 (84-173)||(20225119-20225210)
chr4 (84-179)||(20908637-20908733)
chr4 (148-216)||(25343189-25343257)
chr4 (134-187)||(48327814-48327869)
chr4 (87-220)||(39077800-39077931)
chr4 (133-220)||(47441580-47441667)
chr4 (101-220)||(49938611-49938727)
chr4 (134-194)||(14590861-14590922)
chr4 (84-162)||(30352581-30352661)
chr4 (84-145)||(38755909-38755970)
chr4 (133-207)||(30581515-30581591)
chr4 (75-118)||(35532092-35532135)
chr4 (84-174)||(2813169-2813262)
chr4 (84-118)||(11394952-11394986)
chr4 (84-118)||(11404679-11404713)
chr4 (156-190)||(23580281-23580315)
chr4 (135-220)||(30496374-30496457)
chr4 (84-154)||(38786673-38786743)
chr4 (84-118)||(40553938-40553972)
chr4 (148-194)||(51420598-51420644)
chr4 (84-145)||(33836488-33836549)
chr4 (84-207)||(10277758-10277879)
chr4 (99-176)||(16494259-16494338)
chr4 (84-216)||(32478793-32478918)
chr4 (84-116)||(32484335-32484367)
chr4 (133-184)||(35894511-35894563)
chr4 (84-144)||(44718641-44718701)
chr4 (84-116)||(56323002-56323034)
[»] scaffold0057 (4 HSPs)
scaffold0057 (75-193)||(24764-24882)
scaffold0057 (84-194)||(46855-46965)
scaffold0057 (96-194)||(43683-43780)
scaffold0057 (86-146)||(46710-46770)
[»] scaffold0258 (1 HSPs)
scaffold0258 (84-220)||(13025-13160)
[»] scaffold0168 (1 HSPs)
scaffold0168 (84-220)||(30577-30711)
[»] scaffold0015 (1 HSPs)
scaffold0015 (84-207)||(48635-48756)
[»] scaffold0311 (1 HSPs)
scaffold0311 (96-194)||(10834-10932)
[»] scaffold0018 (1 HSPs)
scaffold0018 (84-187)||(72868-72971)
[»] scaffold0223 (1 HSPs)
scaffold0223 (84-220)||(11129-11263)
[»] scaffold0187 (2 HSPs)
scaffold0187 (85-220)||(10052-10185)
scaffold0187 (85-220)||(20380-20513)
[»] scaffold1176 (1 HSPs)
scaffold1176 (87-220)||(1591-1722)
[»] scaffold0036 (1 HSPs)
scaffold0036 (129-217)||(35063-35152)
[»] scaffold0167 (1 HSPs)
scaffold0167 (103-207)||(23610-23714)
[»] scaffold0180 (1 HSPs)
scaffold0180 (84-170)||(24134-24220)
[»] scaffold0028 (1 HSPs)
scaffold0028 (128-188)||(32960-33021)
[»] scaffold0005 (1 HSPs)
scaffold0005 (134-194)||(226456-226517)
[»] scaffold0254 (1 HSPs)
scaffold0254 (148-220)||(4155-4227)
[»] scaffold0954 (1 HSPs)
scaffold0954 (95-190)||(3572-3667)
[»] scaffold0194 (1 HSPs)
scaffold0194 (74-170)||(24696-24792)


Alignment Details
Target: chr3 (Bit Score: 175; Significance: 2e-94; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 33235769 - 33235545
Alignment:
Q  1 ttctgctgcttcaagtccacgtccactttcttagctcctgttcaaatttcaaattaatttccaataaatgaactaaaaacaataagggcaacctggtgca 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33235769 ttctgctgcttcaagtccacatccactttcttagctcctgttcaaatttcaa-ttaatttccaataaatgaactaaaaacaataagggcaacctggtgca 33235671  T
Q  101 ctaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgtttacacg 199  Q
    |||||||| |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  33235670 ctaaagcttccgcatacgtaaggtctgcg-aggggtcccaccatttagtgtattgtacacagtcttaccctgtttttttacacaagaggctctttacacg 33235572  T
Q  200 atttgaacttgtgacctttcatctcac 226  Q
    |||||||||||||||||||||| ||||    
T  33235571 atttgaacttgtgacctttcatgtcac 33235545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 12914036 - 12914171
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||| | ||||||||||||| | | || ||| ||| ||||| |||||||| ||||||||||||| | ||||||||||||||||||||    
T  12914036 aagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacaca 12914135  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttc 219  Q
    ||||||||||| || || ||||||||||||||||||    
T  12914136 agaggctgtttccaggacttgaacttgtgacctttc 12914171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 40272813 - 40272936
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  40272813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 40272912  T
Q  184 agaggctgtttacacgatttgaac 207  Q
    ||||| ||||| || || ||||||    
T  40272913 agaggttgtttccaggacttgaac 40272936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 6411834 - 6411945
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||||||||||||| |||| ||| ||| |||||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgttt 6411932  T
Q  195 acacgatttgaac 207  Q
    ||| || ||||||    
T  6411933 acaagacttgaac 6411945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 22609922 - 22609799
Alignment:
Q  83 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 182  Q
    ||||||||||| |||||||| ||||||||||||||| |||| | | ||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  22609922 taagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacac 22609824  T
Q  183 aagaggctgtttacacgatttgaac 207  Q
    |||||||||||| || || ||||||    
T  22609823 aagaggctgtttccaagacttgaac 22609799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 13628791 - 13628929
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||| |||||    
T  13628791 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttaca 13628890  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  13628891 caagaggctgtttccaggacttgaacccgtgacctttca 13628929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 39203670 - 39203536
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||||||| | |||| | | ||| |||||||||||||| ||||||||||||||  |||||||||  |||||||||    
T  39203670 aagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacaca 39203573  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||  | || |||||| ||||||||||||    
T  39203572 agaggctgtttcaaggacttgaacctgtgacctttca 39203536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 26869862 - 26869727
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||| |||||||||||||||| | || | |  || |||||||||||||| ||||||||||||||| |||||||||| ||||||||     
T  26869862 aagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacc 26869764  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || |||||| ||||||||||||    
T  26869763 agaggctgtttccaggacttgaacctgtgacctttca 26869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 31904856 - 31904968
Alignment:
Q  83 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||| ||||||||||||||||||||||| |||||||  ||| ||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  31904856 taagggcagcctggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttttaca 31904955  T
Q  182 caagaggctgttt 194  Q
     || |||||||||    
T  31904956 taataggctgttt 31904968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 220
Target Start/End: Complemental strand, 26573282 - 26573147
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    |||||| |||||||||||||||||| |||||||| | || | | ||  ||||||||||| || ||||||||||||||| ||||||||||||||||||||     
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacag 26573183  T
Q  185 gaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| || || ||||||  |||||||||||    
T  26573182 gaggctgtttccaggacttgaacccgtgacctttca 26573147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 54484847 - 54484736
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 182  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||| || ||||||||||    
T  54484847 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacac 54484748  T
Q  183 aagaggctgttt 194  Q
    ||||||||||||    
T  54484747 aagaggctgttt 54484736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 207
Target Start/End: Complemental strand, 14987115 - 14986990
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||| |||| |||||||||||||||||||||| | |||| | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  14987115 aagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 14987016  T
Q  182 caagaggctgtttacacgatttgaac 207  Q
    ||||||||||||| || || ||||||    
T  14987015 caagaggctgtttccaggacttgaac 14986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 34420656 - 34420781
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||||| |||||| |||| | | ||| |||||||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgttt 34420755  T
Q  195 acacgatttgaacttgtgacctttca 220  Q
     || || ||||||  |||||||||||    
T  34420756 ccaggacttgaacccgtgacctttca 34420781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 10795424 - 10795549
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||||||||||||||||| ||||||||||||||| | || |   ||| ||||||||||||||   ||||||||||||||| |||||||||| |||||||    
T  10795424 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 10795523  T
Q  182 caagaggctgtttacacgatttgaac 207  Q
    ||||||||||||| || || ||||||    
T  10795524 caagaggctgtttccaggacttgaac 10795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 46421035 - 46421172
Alignment:
Q  84 aagggcaacctggtgcact-aaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttac 180  Q
    |||||||| | |||||||| |||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  46421035 aagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 46421134  T
Q  181 acaagaggctgtttacacgatttgaacttgtgaccttt 218  Q
    |||||||||||||| || || ||||||  |||||||||    
T  46421135 acaagaggctgtttccaggacttgaacccgtgaccttt 46421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 516568 - 516429
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtg---tattgtacgcagtcttaccctgttttttac 180  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||||| ||||||  ||   |||||| ||||| |||||||||||||||||    
T  516568 aagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttac 516469  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||||| || || ||||||  |||||||||||    
T  516468 acaagaggctgtttccaggacttgaacccgtgacctttca 516429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 1217244 - 1217110
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| ||||||| |||||| ||||||||||||||| |||||||||  |||||||||    
T  1217244 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctg--ttttacaca 1217147  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  1217146 agaggctgtttccaggacttgaacccgtgacctttca 1217110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 29366721 - 29366857
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||||||||  |||||||||||||||| |||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||| |    
T  29366721 aagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttata 29366820  T
Q  182 caagaggctgtttacacgatttgaacttgtgaccttt 218  Q
    ||||||||||||| || || ||||||  |||||||||    
T  29366821 caagaggctgtttccaggacttgaacccgtgaccttt 29366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 45786215 - 45786327
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||| |||| || | || | | ||| ||||||||||||||   ||||||||||||||| ||||||||||||||||||    
T  45786215 aagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 45786314  T
Q  182 caagaggctgttt 194  Q
    |||||||||||||    
T  45786315 caagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 53996566 - 53996703
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 182  Q
    ||||||| || ||||||||||||||||| |||||| |  | | | ||| |||||||||||||| | ||||||||| |||| |||||||||||||||||||    
T  53996566 aagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacac 53996665  T
Q  183 aagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||| ||||| ||||| ||||||  |||||||||||    
T  53996666 aagaggttgtttccacgacttgaacacgtgacctttca 53996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 55401314 - 55401209
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgat 201  Q
    |||||||||||||||| |||| | | ||| |||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||||| ||     
T  55401314 aaagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggac 55401215  T
Q  202 ttgaac 207  Q
    ||||||    
T  55401214 ttgaac 55401209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 7943143 - 7943036
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 185  Q
    |||||||  ||||||||||||||||||||||| | || ||| ||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  7943143 ggcaacccagtgcactaaagctcccgcatacgcatggtctg-gaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaag 7943045  T
Q  186 aggctgttt 194  Q
    | |||||||    
T  7943044 atgctgttt 7943036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 13730603 - 13730738
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||| ||| ||||||||||||||||||    
T  13730603 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttaca 13730702  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||||| || || ||||||  ||||||||    
T  13730703 caagaggctgtttccaggacttgaacccgtgacctt 13730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 45948850 - 45948972
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||||||||||||| | || | | ||| ||||||||||| || |||||||||| |||| |||||||| |||||||||||||||| |||||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgttt 45948949  T
Q  195 acacgatttgaacttgtgacctt 217  Q
     || || ||||||  ||||||||    
T  45948950 ccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 54374349 - 54374483
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaag 185  Q
    |||| ||||||| ||||||||||||||||| | | || | | ||| |||||||||||||| | || ||||||||||| |||||||| |||||||||||||    
T  54374349 ggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaag 54374448  T
Q  186 aggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||| ||||| || || |||||| ||||||||||||    
T  54374449 aggttgtttccaagacttgaacctgtgacctttca 54374483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 49013474 - 49013586
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| ||||||||||||||||||| || |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  49013474 aagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 49013573  T
Q  182 caagaggctgttt 194  Q
    |||||||||||||    
T  49013574 caagaggctgttt 49013586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 22122915 - 22123052
Alignment:
Q  81 aataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 180  Q
    ||||||||||||| ||||||||| ||||| |||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  ||||||    
T  22122915 aataagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttac 22123012  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| |||||| || || ||||||  | |||||||||    
T  22123013 acaagagactgtttccaggacttgaacccgcgacctttca 22123052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 207
Target Start/End: Complemental strand, 31593003 - 31592882
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| | |||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  31593003 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 31592906  T
Q  184 agaggctgtttacacgatttgaac 207  Q
    ||||||||||| || || ||||||    
T  31592905 agaggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 8247688 - 8247826
Alignment:
Q  85 agggcaacctggtgcact-aaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||  ||||||| |||||||||||||||| | || | | ||| | |||||||||||  | ||||||||||||||  ||||||||||||||||||    
T  8247688 agggcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttaca 8247787  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  8247788 caagaggctgtttccaggacttgaacccgtgacctttca 8247826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 4495713 - 4495798
Alignment:
Q  132 agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| ||| || || ||||||  ||||||||    
T  4495713 agggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgacctt 4495798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 9276401 - 9276313
Alignment:
Q  102 taaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 191  Q
    ||||| ||||||||||| | || | | |||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  9276401 taaagttcccgcatacgcagggtccgggaaagggtcc-accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 15797376 - 15797271
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| ||||||| |||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  15797376 aagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 15797279  T
Q  184 agaggctg 191  Q
    ||||||||    
T  15797278 agaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 31672851 - 31672739
Alignment:
Q  83 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaa-agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||| || ||||||||||||||||||||||| |||||||   || ||| || |||||||||||| |||||||||||||| |||| || |||||||||||    
T  31672851 taaggacagcctggtgcactaaagctcccgcacacgtaagatatgggaagagagtcccaccatttggtgtattgtacgcactcttgccttgttttttaca 31672752  T
Q  182 caagaggctgttt 194  Q
     || |||||||||    
T  31672751 taataggctgttt 31672739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 47624148 - 47624088
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  47624148 gggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 54032608 - 54032693
Alignment:
Q  132 agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||||||  |||||||||| |||| ||||||||||||||||||||||||| ||||| || || ||||||  ||||||||    
T  54032608 agggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 353351 - 353450
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacac 182  Q
    ||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacac 353450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 34771365 - 34771457
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 176  Q
    ||||||| || ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  34771365 aagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 19731147 - 19731052
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 190  Q
    |||||||||||||||| ||||||  |  | ||| ||||||||||||||| |  ||||||||||||||  |||||| ||||||||||||||||||||    
T  19731147 ggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggct 19731052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 25517171 - 25517282
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 182  Q
    |||||||||| |||||||||||||||| ||||||| | |  | | ||| |||||||||||||| ||||||||||||||| | || | || ||||||||||    
T  25517171 aagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttttacac 25517270  T
Q  183 aagaggctgttt 194  Q
    |||||| |||||    
T  25517271 aagaggatgttt 25517282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 16735596 - 16735487
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||||  ||||||| ||||| ||||||||| |  | | | ||| |||||||||||||| ||||||||||||||| |||||||||| ||||  |||    
T  16735596 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttctaca 16735498  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  16735497 agaggctgttt 16735487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 24578081 - 24578007
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtac 158  Q
    |||||||||| ||||||||| || ||||||||| ||| || ||| ||||| ||||||||||||||||||||||||    
T  24578081 aagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 25944626 - 25944489
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacac 182  Q
    ||||||| |||||||| ||||||||||| |||||| | || | | ||| ||||||||||| ||| ||||||||||| ||| ||| ||| |||||||||||    
T  25944626 aagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacac 25944527  T
Q  183 aagaggctgtttacacgatttgaacttgtgacctttca 220  Q
     |||||| |||| || || ||||||   ||||||||||    
T  25944526 gagaggcggtttccaggacttgaacccatgacctttca 25944489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 43114882 - 43114995
Alignment:
Q  97 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtc-ttaccctgtttt-ttacacaagaggctgttt 194  Q
    |||||||||||||||||||||| | |||    | |||||||||||||||| |||||||||| | || | |||||||||||| ||||||||||||||||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaagggtcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgttt 43114981  T
Q  195 acacgatttgaact 208  Q
     || || |||||||    
T  43114982 ccaggacttgaact 43114995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 45620881 - 45620966
Alignment:
Q  136 tcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||| ||  | ||||||  |||||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttca 45620966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 52926220 - 52926304
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttac 168  Q
    |||||||||| ||||| |||||||||||||||||| | || | | ||| | |||||||||||| ||||||||||||||| |||||    
T  52926220 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 5173720 - 5173857
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||||| |||| | | ||| ||| |||||||  ||| |||||||| | |||  |||||  || ||||||||    
T  5173720 aagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttg-tttttaca 5173818  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| ||||| || || ||||||  |||||||||||    
T  5173819 caagaggttgtttccaggacttgaacccgtgacctttca 5173857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 9607345 - 9607223
Alignment:
Q  100 actaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttaca 197  Q
    ||||||||||||||||| |   || ||| ||| |||||||| ||||  | ||||||| ||||||| ||||||||||||||||| ||||||||||||| ||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  198 cgatttgaacttgtgacctttca 220  Q
     || ||||||   ||||||||||    
T  9607245 ggacttgaaccgatgacctttca 9607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 19751723 - 19751628
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 190  Q
    |||||||||||||||  ||||||  || | ||| ||||||||||||||| |  ||||||||||||||  |||||| || |||||||||||||||||    
T  19751723 ggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggct 19751628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 45139479 - 45139615
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||||| || ||||||| |||| ||||||||||| | || ||| ||| ||||||||||||||   |||||||||| |||| |||||||||| |||||||    
T  45139479 aagggcagcccggtgcac-aaagttcccgcatacgca-ggtctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttaca 45139576  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| ||||| ||  | ||||||  |||||||||||    
T  45139577 caagaggttgtttccaaaacttgaacccgtgacctttca 45139615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 52428527 - 52428585
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 191  Q
    |||| |||| |||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  52428527 gggttccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctg 52428585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 35417988 - 35417940
Alignment:
Q  168 ccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 216  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||    
T  35417988 ccctgttttttacacaagaggctgtttccaggatttgaactcgtgacct 35417940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 44403567 - 44403663
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagt-gtattgtacgcagtcttaccctgttttttacacaagaggct 190  Q
    |||||||||||||| | ||||||||| || | | ||| |||||||||||||| || ||||| | ||||| |||||| ||| ||||||||||||||||    
T  44403567 ggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtcttttacacaagaggct 44403663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 30928197 - 30928284
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| ||| || ||||||| ||| ||  |||||| |||||||||||||||||||||||| || || ||||||  |||||||||||    
T  30928197 gggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 30928284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 31922839 - 31922878
Alignment:
Q  83 taagggcaacctggtgcactaaagctcccgcatacgtaag 122  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31922839 taagggcagcctggtgcactaaagctcccgcatacgtaag 31922878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 7696945 - 7697020
Alignment:
Q  141 ccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgaccttt 218  Q
    |||||| ||||||||||||||| |||||||||  ||||||||||||| |||||| || || ||||||  |||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctg--ttttacacaagagactgtttccaggacttgaacccgtgaccttt 7697020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 12525489 - 12525427
Alignment:
Q  158 cgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||| ||||||||| ||||||||||||||||||||| || || | |||| ||||||||||||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttca 12525427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 24577991 - 24577917
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtac 158  Q
    |||||||| | ||||||||| |||||||| ||| | | || ||| |||||| |||||||||||||||||||||||    
T  24577991 aagggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 21875111 - 21875046
Alignment:
Q  143 atttagtgtattgtacgcagtcttaccctgtttttt-acacaagaggctgtttacacgatttgaac 207  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||| ||||| ||  ||||||||    
T  21875111 atttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaac 21875046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 10870025 - 10870088
Alignment:
Q  156 tacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| ||||||||||||| ||||||||||||||||| || || ||||||  |||||||||||    
T  10870025 tacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttca 10870088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 33926190 - 33926103
Alignment:
Q  133 gggtcccaccatt-tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| | ||||||||||| ||| |||||||||| |||||||||||||||| ||| || || ||||||   ||||||||||    
T  33926190 gggtcccaccattatggtgtattgtacacagccttaccctgt-ttttacacaagaggctatttccaggacttgaacccatgacctttca 33926103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 39212081 - 39212042
Alignment:
Q  149 tgtattgtacgcagtcttaccctgttttttacacaagagg 188  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagagg 39212042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 47624264 - 47624221
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacg 118  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  47624264 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatacg 47624221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 4495677 - 4495711
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  4495677 aagggcaacccggtgcactaaagctcccgcatacg 4495711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 10484617 - 10484651
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  10484617 aagggcaacccggtgcactaaagctcccgcatacg 10484651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 40390397 - 40390363
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  40390397 aagggcaacccggtgcactaaagctcccgcatacg 40390363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 54032572 - 54032606
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  54032572 aagggcaacccggtgcactaaagctcccgcatacg 54032606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 8410918 - 8410966
Alignment:
Q  134 ggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 182  Q
    |||||||||| || |||||||||  |||| |||||||||||||||||||    
T  8410918 ggtcccaccagttggtgtattgtgagcagccttaccctgttttttacac 8410966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 24851302 - 24851334
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcata 116  Q
    |||||||||| ||||||||||||||||||||||    
T  24851302 aagggcaacccggtgcactaaagctcccgcata 24851334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 52952592 - 52952532
Alignment:
Q  134 ggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||| |||| ||||||||||| |||||||| | | ||||||||| |||||| |||||    
T  52952592 ggtcccactatttggtgtattgtacacagtcttatcatattttttacataagaggttgttt 52952532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 46247954 - 46248090
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||| |||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46247954 aagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 46248053  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  ||||| |||||    
T  46248054 agaggctgtttccaagacttgaacccgtgacatttca 46248090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 23768334 - 23768454
Alignment:
Q  97 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttac 196  Q
    |||||||||||||||||||||| | || ||| ||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcc 23768433  T
Q  197 acgatttgaacttgtgacctt 217  Q
    | || |||||| |||||||||    
T  23768434 atgacttgaacctgtgacctt 23768454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 34725099 - 34725233
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  34725099 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctg--ttttacaca 34725196  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  34725197 agaggctgtttccaggacttgaacccgtgacctttca 34725233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 18944803 - 18944664
Alignment:
Q  84 aagggcaacctggtgcactaaa-gctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttac 180  Q
    |||||||||| ||||||||||| ||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  18944803 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttac 18944704  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||||| || |  |||||| ||||||||||||    
T  18944703 acaagaggctgtttccaggccttgaacctgtgacctttca 18944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 32632558 - 32632693
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||| ||||||||||||| ||||||||||||| | | ||  || ||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  32632558 aagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacaca 32632656  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  32632657 agaggctgtttccaggacttgaacccgtgacctttca 32632693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 10668384 - 10668246
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||  |||||| |||||||||||    
T  10668384 aagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttaca 10668285  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  10668284 caagaggctgtttccaggacttgaacccgtgacctttca 10668246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 35005282 - 35005144
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| ||||||||||||| |||||||||| | || | | ||| ||||||||||||||   |||||||||| |||| ||||||||||||||||||    
T  35005282 aagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttaca 35005183  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  35005182 caagaggctgttttcaagacttgaacccgtgacctttca 35005144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 180
Target Start/End: Complemental strand, 4349795 - 4349699
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 180  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4349795 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttac 4349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 14617195 - 14617059
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||| |||| |||||||||||||||||||||| | | || | | ||| || ||||||||||| ||||||||||||||  |||||| |||| ||||||||    
T  14617195 aagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacaca 14617096  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||| |||||||||||    
T  14617095 agaggctgtttccaggacttgaactcgtgacctttca 14617059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 27474437 - 27474302
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||| | |||||||||||||||||||||||| | || | | ||| ||||||||||||| ||||||||||||||||  || ||||| ||||||||||    
T  27474437 aagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctg-tttttacaca 27474339  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||| |||||| || || |||||| ||||||||||||    
T  27474338 agagactgtttccaagacttgaacctgtgacctttca 27474302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 46991959 - 46991828
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 185  Q
    |||||||| ||||||||||||||||| |||||| | || | | ||| |||||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaag 46991860  T
Q  186 aggctgtttacacgatttgaacttgtgacctt 217  Q
    ||| ||||| || || ||||||  ||||||||    
T  46991859 aggttgtttccaggacttgaacccgtgacctt 46991828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 20004091 - 20004226
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||| |   || ||| ||| |||||||||||||  | ||||||||||||||| |||||| |||||||||||    
T  20004091 aagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20004190  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctt 217  Q
    | ||||||||||| || || ||||||  ||||||||    
T  20004191 cgagaggctgtttccaggacttgaacccgtgacctt 20004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 30395727 - 30395862
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||  |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  30395727 aagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 30395826  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||||| || || ||||||  ||||||||    
T  30395827 caagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 27201806 - 27201668
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||||||||   |||||||||||||||||||||| |||| | | ||| ||||||||||||||   ||||||||||||||| |||||||||||| | |||    
T  27201806 aagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgaca 27201707  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||   ||||||||||    
T  27201706 caagaggctgtttccaggacttgaacccatgacctttca 27201668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 6925246 - 6925124
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||||||||||||| | || | | ||| |||||||||||||  ||||||||| ||||| |||||||| |||||||||||||||||| |||    
T  6925246 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctattt 6925147  T
Q  195 acacgatttgaacttgtgacctt 217  Q
     || || ||||||  ||||||||    
T  6925146 ccaggacttgaacccgtgacctt 6925124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 18724557 - 18724682
Alignment:
Q  94 tggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 193  Q
    |||||||| |||||||||||||| ||| || | | ||| ||||||||  |||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  18724557 tggtgcac-aaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtt 18724655  T
Q  194 tacacgatttgaacttgtgacctttca 220  Q
    | || || ||||||  |||||||||||    
T  18724656 tccaggacttgaacccgtgacctttca 18724682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 38478283 - 38478417
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||| ||||||||| ||||||||||||||| |||||||||  |||||||||    
T  38478283 aagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 38478380  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||  | || ||||||  |||||||||||    
T  38478381 agaggctgtttctaggacttgaacccgtgacctttca 38478417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 41319807 - 41319943
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggct-gcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 182  Q
    ||||||||||  ||||||| || |||||||||| | ||||| | | ||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  41319807 aagggcaacccagtgcactgaaactcccgcatatg-aagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacac 41319905  T
Q  183 aagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||| |||||| || || || ||| ||||||||||||    
T  41319906 aagagactgtttccaggacttaaacctgtgacctttca 41319943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 45402251 - 45402128
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcag-tctt--accctgttttttacac 182  Q
    |||||||| |||||||||||||||||||||||| | || ||| ||| |||||||||||||| |||||||||||||||  |||  |||||| |||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctg-tttttacac 45402153  T
Q  183 aagaggctgtttacacgatttgaac 207  Q
    |||||||||||| || || ||||||    
T  45402152 aagaggctgtttccaggacttgaac 45402128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 35253188 - 35253296
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||| | ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  35253188 aagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 35253285  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  35253286 agaggctgttt 35253296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 1517312 - 1517418
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt-acac 182  Q
    |||||||||| |||||||||||||||| ||||||| | || ||| ||| ||||||||||| || ||||||||||||||| |||| | |||||||| ||||    
T  1517312 aagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagccttatcatgttttttaacac 1517411  T
Q  183 aagaggc 189  Q
    |||||||    
T  1517412 aagaggc 1517418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 45264411 - 45264537
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 193  Q
    |||||||||||||||||||||| | | || ||| ||| |||||||||||||| | ||||||| || ||| ||||| ||||||||| ||||||||| ||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtt 45264510  T
Q  194 tacacgatttgaacttgtgacctttca 220  Q
    | || || |||||| ||||||||||||    
T  45264511 tccaggacttgaacatgtgacctttca 45264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 45812541 - 45812672
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 186  Q
    ||||||| ||||||||| |||||||||||| | | ||  || ||| |||||||||||||| |||||||||| |||| |||||||  | ||||||||||||    
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccc--tcttttacacaaga 45812638  T
Q  187 ggctgtttacacgatttgaacttgtgacctttca 220  Q
    | |||||| || || |||||| ||||||||||||    
T  45812639 gactgttttcaggacttgaacctgtgacctttca 45812672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 47214666 - 47214532
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||| || ||||||||||| |||||||||||| | | || ||| ||| |||||||||||||| ||||||||||||||  |||||||||  ||||| |||    
T  47214666 aagggtaatctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttaaaca 47214569  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||| |||||| || || ||||||  |||||||||||    
T  47214568 agagactgtttccaggacttgaacccgtgacctttca 47214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 31382206 - 31382324
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 174  Q
    ||||| || |||||||||| ||| || ||||||||||||||| | | || |   ||| |||||||||||||| ||||||||||||||| |||| |||| |    
T  31382206 aaaaaaaaaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-t 31382304  T
Q  175 ttttacacaagaggctgttt 194  Q
    ||||||||||||||||||||    
T  31382305 ttttacacaagaggctgttt 31382324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 23796622 - 23796512
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||| || |||||||||||||||| ||||| | | || ||| ||| ||||| |||||||| ||||||||||||||  |||||  || ||||||||||    
T  23796622 aagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacaca 23796523  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  23796522 agaggctgttt 23796512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 4430080 - 4430129
Alignment:
Q  137 cccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 186  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaaga 4430129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 6983812 - 6983946
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||| || ||||||| |||||||| || |||| | || | |  || |||||||||||||| ||||||||||||||  |||||||||||||||| ||     
T  6983812 aagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttatac- 6983910  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
     |||||||||| || || |||||| ||||||||||||    
T  6983911 -gaggctgtttccaggacttgaacctgtgacctttca 6983946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 18741958 - 18742054
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgtttttt 178  Q
    ||||| |||| ||||||||||||||| |||||||| | || ||| ||| |||||||||||  ||| ||||||||||||||| |||||||||||||||    
T  18741958 aagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 19701720 - 19701617
Alignment:
Q  92 cctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggct 190  Q
    ||||||||||||||||||||||||||| | || | | ||| ||| |||||||||| | |||||||||| ||  ||||||  |||||||||||||||||||    
T  19701720 cctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggct 19701621  T
Q  191 gttt 194  Q
    ||||    
T  19701620 gttt 19701617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 25468285 - 25468400
Alignment:
Q  105 agctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttg 204  Q
    |||||||||||||| | || ||| |||  ||||| ||||||| ||||||||||||||  ||||||||| ||||||||||||||| ||||| || || |||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttg 25468384  T
Q  205 aacttgtgacctttca 220  Q
    |||   ||||||||||    
T  25468385 aacccatgacctttca 25468400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 2435798 - 2435924
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 193  Q
    ||||||||||||||||||||| || | ||   |  || |||||||||||||| | |||||||||||||| |||||||| ||||| ||||| |||||||||    
T  2435798 ggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtt 2435897  T
Q  194 tacacgatttgaacttgtgacctttca 220  Q
    | || || ||||||  |||||||||||    
T  2435898 tccaggacttgaacccgtgacctttca 2435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 10378738 - 10378828
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 176  Q
    ||||| || |||||||||||||||||||||| | | || |   ||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 17470411 - 17470457
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  17470411 gtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 17470457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 19932755 - 19932856
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacac 182  Q
    |||||||||||||||||||| | ||  ||||||| | || | | ||| ||||||||||||||   ||||||||||||||| |||||||||||||||||||    
T  19932755 agggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacac 19932854  T
Q  183 aa 184  Q
    ||    
T  19932855 aa 19932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 8197200 - 8197095
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||| ||||||||||||  |||||| | || | | ||| |||||| ||||||| ||||| |||||| || |||||| |||||||||||||    
T  8197200 aagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttacaca 8197101  T
Q  184 agaggc 189  Q
    ||||||    
T  8197100 agaggc 8197095  T

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Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 19414594 - 19414460
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | ||   | ||| |||||||||||||| ||||||||||||||| |||| ||||  ||||||| |    
T  19414594 aagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctg--ttttacata 19414497  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| |||  | || ||||||  |||||||||||    
T  19414496 agaggctctttctaggacttgaacccgtgacctttca 19414460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 35019375 - 35019251
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||| |||||||| | || ||| ||  ||||||||||| || |||||||||| |||| ||||  ||| |||||| |||||||| |||||    
T  35019375 ggtgcactaaagctctcgcatacgcagggtctgggag-gggtcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttgttt 35019277  T
Q  195 acacgatttgaacttgtgacctttca 220  Q
    ||| || |||||  ||||||||||||    
T  35019276 acaggacttgaatctgtgacctttca 35019251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 9939621 - 9939482
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaa-agggtcccacca--tttagtgtattgtacgcagtcttaccctgttttttac 180  Q
    ||||| |||| |||||||||||||||||||||||| | || | | |||  |||||||||||  ||| |||||||| |||||  |||||| ||||| |||     
T  9939621 aagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaa 9939522  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||| ||||| || || ||||||| |||||||||||    
T  9939521 acaagaggttgtttccaggacttgaactcgtgacctttca 9939482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 34679274 - 34679330
Alignment:
Q  138 ccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgttt 34679330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 46859213 - 46859129
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgtttttt 178  Q
    ||||||||||| ||||| |||||| |||| |||  || | |||||||||||| | ||||||||||||||||||||||||||||||    
T  46859213 ggtgcactaaaactcccacatacgcaaggcctgaaaatgagtcccaccattttggtgtattgtacgcagtcttaccctgtttttt 46859129  T

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Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 11596650 - 11596560
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||||| | || |   ||| |||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||| |||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgt-ttttacacaagaggttgttt 11596560  T

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Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 12126850 - 12126946
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||| |||||||||||| | | || | | ||| ||||||||| |||| ||||||||||||||| |||||||||  |||||||||||| |||||||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctg--ttttacacaagaagctgttt 12126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 43768296 - 43768205
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttt 175  Q
    ||||||| || |||||| ||||||||||| ||||| | || ||| ||| ||||||||||| || |||||||||| |||| ||||||||||||    
T  43768296 aagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

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Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 44485129 - 44485220
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||||||| |  | | ||| |||||| ||||||| ||||||||||||||| |||||| ||| ||||||||||| || |||||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgttt 44485220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 15505702 - 15505632
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgt 173  Q
    |||||||||||||||| | ||   | ||| |||||||||||||| ||||||||||||||||||||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 43207640 - 43207542
Alignment:
Q  97 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||| ||||||| || || ||| |||  |||||||||| ||| |||||||||| || |||||||||||||||| ||| |||||| |||||    
T  43207640 tgcactaaagctctcgcatacatagggtctgggaagaggtcccaccaatttggtgtattgtatgccgtcttaccctgtttttcacataagaggttgttt 43207542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 207
Target Start/End: Complemental strand, 22325049 - 22324927
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacac 182  Q
    |||||| ||||||||||||||||||||||||||| | || | | ||  |||  |||||||||   |||||||||| |||| |||||||||||||| ||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggtcgg-gacggggctccaccatttttggtgtattgtatgcagccttaccctgttttt-acac 22324952  T
Q  183 aagaggctgtttacacgatttgaac 207  Q
    |||||||||||| || || ||||||    
T  22324951 aagaggctgtttccaagacttgaac 22324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 35117777 - 35117905
Alignment:
Q  95 ggtgcactaaagctcccgcat-acgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctg 191  Q
    |||||||||||||||| |||| ||| | || | | ||| |||||||| |||||   ||||||||||| ||| |||||||||| ||||||||||||||||     
T  35117777 ggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggcta 35117876  T
Q  192 tttacacgatttgaacttgtgacctttca 220  Q
    ||| || || ||||||  |||||||||||    
T  35117877 tttccaggacttgaacccgtgacctttca 35117905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 218
Target Start/End: Original strand, 39214961 - 39215094
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtg-tattgtacgcagtcttaccctgttttttacacaa 184  Q
    ||||| || |||||||||||||| || |||||| | ||  || ||| ||| |||||||||| |   |||||||||||| ||||||| |||||||||||||    
T  39214961 gggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaa 39215060  T
Q  185 gaggctgtttacacgatttgaacttgtgaccttt 218  Q
    |||| ||||| ||  | ||||||||| |||||||    
T  39215061 gaggttgtttccagtacttgaacttgggaccttt 39215094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 18335305 - 18335425
Alignment:
Q  100 actaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacg 199  Q
    ||||||||||||| ||||  | || ||  |||||||||||| |||||  |||||||||||||   |||||||  |||||| ||||||| |||||| || |    
T  18335305 actaaagctcccgtatacacatggtctaggaaagggtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccagg 18335404  T
Q  200 atttgaacttgtgacctttca 220  Q
    | || ||||||||||||||||    
T  18335405 actttaacttgtgacctttca 18335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 24564445 - 24564365
Alignment:
Q  140 accatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| ||| ||||||||||  ||||||||||||||||||||||||| ||||| || || |||||  || |||||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttca 24564365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 42304208 - 42304303
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgttttt 177  Q
    |||||||| | ||||||||||||||||| |||||| | || | | ||| |||||||||||  ||| ||||||||||||||  ||||||||||||||    
T  42304208 aagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 15511150 - 15511288
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgta--cgcagtcttaccctgttttttaca 181  Q
    |||||| || ||||||||||||||| | |||||| | || |   ||| |||| ||||||||| | |||||||||  ||||| ||||||||||||||||||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttaca 15511249  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||| |||| || || || ||  ||||||||||||    
T  15511250 caagaggcggtttccaggacttcaatatgtgacctttca 15511288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 20999851 - 20999957
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagg-gctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 182  Q
    ||||||| || ||||||||||||||||||| |||| | || || | ||| ||| |||| ||||| ||||||||||||||| ||| || ||||||||||||    
T  20999851 aagggcagcccggtgcactaaagctcccgcgtacgcagggtgccg-gaaggggccccatcatttggtgtattgtacgcagccttgccttgttttttacac 20999949  T
Q  183 aagaggct 190  Q
    ||| ||||    
T  20999950 aagtggct 20999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 30682963 - 30682848
Alignment:
Q  89 caacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagagg 188  Q
    |||| |||||||| |||||||||||||||| | || | | ||| ||||||||||||||  ||||| |||| || ||||||| ||||||| ||||||||||    
T  30682963 caacttggtgcac-aaagctcccgcatacgcacggtccgggaaggggtcccaccatttgttgtat-gtacacaatcttaccttgttttt-acacaagagg 30682867  T
Q  189 ctgtttacacgatttgaac 207  Q
    || ||| || |||||||||    
T  30682866 ctattttcaggatttgaac 30682848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 27136701 - 27136762
Alignment:
Q  133 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 193  Q
    |||||||||||||| | |||||||||||||  |||||| |||||||||||||||||| ||||    
T  27136701 gggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgtt 27136762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 52910311 - 52910238
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgtttttt-acacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| ||||| ||||||||||||| ||  |||||||||||| || || |||||| ||||||||||||    
T  52910311 gtgtattgtacacagtcctaccctgtttttttacctaagaggctgtttccaagagttgaacctgtgacctttca 52910238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 50760291 - 50760359
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 216  Q
    ||||||| ||||||| ||||||| ||||| ||||||||||||||||| || || ||||||  |||||||    
T  50760291 gtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacct 50760359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 31272429 - 31272511
Alignment:
Q  137 cccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||  |||  ||||||||| |||||| |||||| ||||||||||| ||||| || || |||||| ||||||||||||    
T  31272429 cccaccatttgatgtgctgtacgcagccttaccatgtttt-tacacaagaggttgtttccaggacttgaacctgtgacctttca 31272511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 19656151 - 19656217
Alignment:
Q  129 gaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||| ||||||| | ||||||||||  ||  ||||| ||||||||||||||||||||||||    
T  19656151 gaaagggtcctaccattttggtgtattgtacatagcgttaccatgttttttacacaagaggctgttt 19656217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 33223092 - 33223031
Alignment:
Q  133 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||| | |||||||||||||  ||| |||||||||| ||||||||||||||||    
T  33223092 gggtcccaccattttggtgtattgtacgcaacctttccctgttttt-acacaagaggctgttt 33223031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 50606560 - 50606498
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt 146  Q
    |||||||||| |||||||||||||||||||||| | | || | | ||| ||||||||||||||    
T  50606560 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 22327185 - 22327120
Alignment:
Q  155 gtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||| ||| ||||||||||||||||||||||||| ||||| || || ||||||  | |||||||||    
T  22327185 gtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttca 22327120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 23371268 - 23371145
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||| || |||||| | || ||| ||| |||||||| ||||| ||||||||||| ||  ||| ||| ||||||||| |||| ||||||||    
T  23371268 ggtgcactaaagctaccacatacgcagggtctg-gaaggggtcccagcatttggtgtattgtacacaaccttgccc-gttttttacccaagtggctgttt 23371171  T
Q  195 acacgatttgaacttgtgacctttca 220  Q
      | || ||||||  |||||||||||    
T  23371170 ctaggacttgaacccgtgacctttca 23371145  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 34149010 - 34149071
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||| |||||||| || | |||||||||  |||||||| |||| |||||||||||||||||    
T  34149010 gggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgttt 34149071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 20036329 - 20036241
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttt-tttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||| ||||||||| |||||||| ||||| ||||||||| | | ||||||||||||  ||||| || || ||||||  |||||||||||    
T  20036329 gggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctttca 20036241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 20169156 - 20169200
Alignment:
Q  150 gtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||| |||||||||| | |||||||||||||||| |||||    
T  20169156 gtattgtacacagtcttacctttttttttacacaagagggtgttt 20169200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 21910699 - 21910743
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttt 177  Q
    |||||||||||||| ||||||||||||||  |||||||| |||||    
T  21910699 gggtcccaccatttggtgtattgtacgcaaccttaccctattttt 21910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 192
Target Start/End: Complemental strand, 25290242 - 25290214
Alignment:
Q  164 cttaccctgttttttacacaagaggctgt 192  Q
    |||||||||||||||||||||||||||||    
T  25290242 cttaccctgttttttacacaagaggctgt 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 11617586 - 11617725
Alignment:
Q  81 aataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 180  Q
    ||||||||||||| |||||||||||| ||| ||||||| | || |   ||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  11617586 aataagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttac 11617685  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||| ||||| || || |||||| ||||||||||||    
T  11617686 acaagaggttgtttccaggacttgaacctgtgacctttca 11617725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 2541020 - 2541155
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||| |||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  2541020 aagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacaca 2541119  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttc 219  Q
    ||||||||||| || || ||||||  ||||||||||    
T  2541120 agaggctgtttccaggacttgaacccgtgacctttc 2541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 23419675 - 23419809
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||| || | ||||||||||| |||||| ||| |||| ||  ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23419675 aagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 23419774  T
Q  184 agaggctgtttacacgatttgaacttgtgaccttt 218  Q
    ||||||||||| ||  | |||||| ||||||||||    
T  23419775 agaggctgtttccagaacttgaacctgtgaccttt 23419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 219
Target Start/End: Original strand, 19426882 - 19427025
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 174  Q
    ||||| || |||||||||| |||||||| |||||| |||||| | | || | | ||| |||||||||||||| |||||||||||||||||||||||| ||    
T  19426882 aaaaaaaaaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaa-gggtcccaccatttggtgtattgtacgcagtcttaccctatt 19426980  T
Q  175 ttttacacaagaggctgtttacacgatttgaacttgtgacctttc 219  Q
    |||||||||||||||||||| || || ||||||  ||||||||||    
T  19426981 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 19427025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 7879781 - 7879639
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 174  Q
    ||||| || |||||||||| |||||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||| ||||    
T  7879781 aaaaaaaaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtt 7879682  T
Q  175 ttttacacaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    |||||||||||||  ||||| || || ||||||  ||||||||    
T  7879681 ttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 21172010 - 21172144
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  21172010 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 21172107  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  21172108 agaggctgtttccaggacttgaacccgtgacctttca 21172144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 31591110 - 31591244
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | |||| | | ||| ||||||||||||||| |||||||||||||| ||||| |||  |||||||||    
T  31591110 aagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctg--ttttacaca 31591207  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||| ||||| || || ||||||| |||||||||||    
T  31591208 agaggttgtttccaggacttgaactcgtgacctttca 31591244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 32758393 - 32758259
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||| ||| |||||||||  |||||||||    
T  32758393 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctg--ttttacaca 32758296  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || |||||| ||||||||||||    
T  32758295 agaggctgtttccaggacttgaacctgtgacctttca 32758259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 42798803 - 42798670
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| | ||||||| |||||||||||| | | || | | |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  42798803 aagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacaca 42798704  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    |||| |||||| || || ||||||  ||||||||    
T  42798703 agagactgtttccaagacttgaacccgtgacctt 42798670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 27629768 - 27629633
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||| ||||| ||||||| | | || | | ||| |||||||||||||| ||||||| ||||||  ||||||||||||||||||||    
T  27629768 aagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacaca 27629669  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttc 219  Q
    ||||||||||| || || ||||||  ||||||||||    
T  27629668 agaggctgtttccaggacttgaacccgtgacctttc 27629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 33871914 - 33872046
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 186  Q
    ||||||||||||||||||||||| |||||||  | || ||| ||| |||||||||||||| ||||||||||||||| |||| |||| |||||||||||||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-tttttacacaaga 33872012  T
Q  187 ggctgtttacacgatttgaacttgtgacctttca 220  Q
    || ||||| || || ||||||  | |||||||||    
T  33872013 ggttgtttccaggacttgaacccgcgacctttca 33872046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 42391101 - 42391235
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  42391101 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 42391198  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||| ||||||| || || ||||||  |||||||||||    
T  42391199 agaagctgtttccaggacttgaacccgtgacctttca 42391235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 42805660 - 42805525
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||| ||| ||||||||||||||||||    
T  42805660 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttaca 42805561  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||||| || || ||||||  ||||||||    
T  42805560 caagaggctgtttccaggacttgaacccgtgacctt 42805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 47716595 - 47716460
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| ||||||| |||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  47716595 aagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 47716496  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||||| || || ||||||  ||||||||    
T  47716495 caagaggctgtttccaggacttgaacccgtgacctt 47716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 10693074 - 10693208
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||||  |||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||  | |||||||||    
T  10693074 aagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc--tcttttacaca 10693171  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  10693172 agaggctgtttccaggacttgaacccgtgacctttca 10693208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 220
Target Start/End: Original strand, 28362165 - 28362282
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatt 202  Q
    ||||||||| |||| | |||| ||| ||| |||||||||||||| ||||||||||||||| ||||||  |||||||||||||||||| ||||  | || |    
T  28362165 aaagctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggact 28362264  T
Q  203 tgaacttgtgacctttca 220  Q
    ||||| ||||||||||||    
T  28362265 tgaacctgtgacctttca 28362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 217
Target Start/End: Original strand, 35334818 - 35334948
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    |||| |||| |||||||||||||||| ||||||| | || | | ||| |||||||||||||  ||||||||||| |||||||||||||||||||||||      
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacac-- 35334915  T
Q  185 gaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||| |||||| || || ||||||| ||||||||    
T  35334916 gagactgtttccaggacttgaactcgtgacctt 35334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 35787270 - 35787378
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||| | ||||||||||||||| |||| | | ||| ||||||| |||||| ||||||||||||||  |||||| || ||||||||||    
T  35787270 aagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatg-tttttacaca 35787368  T
Q  184 agaggctgtt 193  Q
    ||||||||||    
T  35787369 agaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 43557618 - 43557470
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaa-gctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccct 171  Q
    ||||| || |||||||||| ||||||||||| ||||||||||||| |  | | | ||  |||||||||||||  | ||||||||||||||| ||||| ||    
T  43557618 aaaaaaaaaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactct 43557519  T
Q  172 gttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||||||||||| || || ||||||   ||||||||||    
T  43557518 gttttttacacaagaggctgtttccaggacttgaacccatgacctttca 43557470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 19265947 - 19265813
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||| || ||||||||||||||||| |||| ||| || | | ||| |||||||||||||| ||||||||||||||| ||||||||  ||||||||||    
T  19265947 aagggcagcccggtgcactaaagctcccacatatgta-ggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-ctttttacaca 19265850  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    || |||||| | || || ||||||  |||||||||||    
T  19265849 agcggctgtatccaagacttgaacccgtgacctttca 19265813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 34626209 - 34626344
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| | || ||||||||||||||||||| | || | | ||| || ||||||||||| |||||||| |||||| ||||||||| ||||||||||    
T  34626209 aagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctg-tttttacaca 34626307  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
     |||||||||| || || |||||  |||| |||||||    
T  34626308 ggaggctgtttccaggacttgaatctgtggcctttca 34626344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 42101899 - 42102019
Alignment:
Q  98 gcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttac 196  Q
    ||||||||||| ||| ||||| | || | | ||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||  |||||||||||| |    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttcc 42101998  T
Q  197 acgatttgaacttgtgacctt 217  Q
    | || |||||||| |||||||    
T  42101999 aggacttgaacttttgacctt 42102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 22698968 - 22699074
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaa-gggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttac 180  Q
    ||||| |||| ||||||||| |||||||||||||  | || | | |||| ||||||||||||||   |||||||||||||||||||||||||||||||||    
T  22698968 aagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttac 22699067  T
Q  181 acaagag 187  Q
    |||||||    
T  22699068 acaagag 22699074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 42477005 - 42476897
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||||||||||||| |||||||||||| | |  | ||  ||| |||||||||||||| ||||||||||||||| |||||| ||  |||||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttg--ttttacaca 42476908  T
Q  184 agaggctgttt 194  Q
    |||| ||||||    
T  42476907 agagactgttt 42476897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 48123534 - 48123621
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||| || || ||||||   ||||||||||    
T  48123534 gggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttca 48123621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 48735123 - 48735231
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| ||||||  || |||||||||    
T  48735123 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc--gtgttttacaca 48735220  T
Q  184 agaggctgttt 194  Q
    ||||| |||||    
T  48735221 agaggttgttt 48735231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 14099008 - 14099113
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||| |||||||||  ||| |||| ||||||||| ||   | ||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14099008 aagggcagcctggtgcaa-aaatctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacaca 14099106  T
Q  184 agaggct 190  Q
    | |||||    
T  14099107 aaaggct 14099113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 14409025 - 14409130
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||| |||||||||  ||| |||| ||||||||| ||   | ||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14409025 aagggcagcctggtgcaa-aaatctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacaca 14409123  T
Q  184 agaggct 190  Q
    | |||||    
T  14409124 aaaggct 14409130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 18512455 - 18512588
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    |||||||||  |||||| |||||||||||||||| | || | | ||| |||||||||||||  ||||||||||||||| ||||||||  |||||||||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaa 18512553  T
Q  185 gaggctgtttacacgatttgaacttgtgacctttc 219  Q
    || | ||||| || || ||||||  ||||||||||    
T  18512554 gatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 29907552 - 29907417
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 182  Q
    |||||||||| |||||||||||||||||||||||  | || | | ||  |||||||||||||| | ||||||| |||||| ||||| || ||||||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacac 29907455  T
Q  183 aagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||  | || ||||||  |||||||||||    
T  29907454 aagaggctgtttctaggacttgaacccgtgacctttca 29907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 40464010 - 40463901
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||  |||||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||| ||||||| ||||||| | ||||||||||    
T  40464010 aagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccag-tttttacaca 40463912  T
Q  184 agaggctgttt 194  Q
    |||| ||||||    
T  40463911 agagactgttt 40463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 16341419 - 16341302
Alignment:
Q  78 aacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgtttt 176  Q
    |||| |||||||| || ||||||| |||||||||||||| |  ||| | | |||  || |||||||||| | ||||||||||| || |||||||||||||    
T  16341419 aacattaagggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgtttt 16341320  T
Q  177 ttacacaagaggctgttt 194  Q
    ||||||||||||||||||    
T  16341319 ttacacaagaggctgttt 16341302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 18747621 - 18747484
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 182  Q
    ||||||| || |||||||||||||||||||||||| | ||     ||| ||||||||||| || ||||||| ||||||| ||||||||| ||||||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacac 18747522  T
Q  183 aagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    || ||||||||| || || |||| |  |||||||||||    
T  18747521 aaaaggctgtttccaagacttgatcccgtgacctttca 18747484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 7645026 - 7644954
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| || || ||||||  |||||||||||    
T  7645026 gtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 7644954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 21566559 - 21566439
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 193  Q
    |||||||||||||||||||||| | | ||   | ||| |||||| ||||||| | |||||||||||||||||| | |||||||||||||||||||| |||    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcggtt 21566460  T
Q  194 tacacgatttgaacttgtgac 214  Q
    | || || |||||| ||||||    
T  21566459 tccaagacttgaacctgtgac 21566439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 194
Target Start/End: Complemental strand, 38604642 - 38604551
Alignment:
Q  102 taaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||||| | || | |  || ||||| |||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgttt 38604551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 46354281 - 46354195
Alignment:
Q  133 gggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    |||||||||||||  | ||||||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||  ||||||||    
T  46354281 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 2662982 - 2663057
Alignment:
Q  130 aaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaac 207  Q
    ||||||||||||||||| ||||||||||||||| |||||||  | |||||||||||||||||||| || || ||||||    
T  2662982 aaagggtcccaccatttggtgtattgtacgcagccttaccc--tattttacacaagaggctgtttccaggacttgaac 2663057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 23618978 - 23619075
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| | |||||||||||||| ||| ||| |||| ||||||| ||||||||||||||  |||||||||| ||  ||||| ||||||| ||||    
T  23618978 aagggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtacacaagcttactctgttttataca 23619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 8148947 - 8149077
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt-acac 182  Q
    ||||| || ||| ||||||||| ||| |||||||| |||  ||| ||| |||||||||||||| ||||||||||||||  |||||||| |||||| ||||    
T  8148947 aagggtaatctgatgcactaaaactctcgcatacgcaagt-ctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacac 8149045  T
Q  183 aagaggctgtttacacgatttgaacttgtgac 214  Q
    ||||||  |||| || || ||||||| |||||    
T  8149046 aagaggtagttttcaggacttgaactcgtgac 8149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 19266564 - 19266461
Alignment:
Q  104 aagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgattt 203  Q
    ||||||||||||||| | || | | ||| || |||||| |||| ||||||||||||||| ||||||||||||||||| |||| |||| ||| || || ||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggactt 19266465  T
Q  204 gaac 207  Q
    ||||    
T  19266464 gaac 19266461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 27889317 - 27889395
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcag 162  Q
    |||||||||| |||| || |||||||||||||||| | || | | ||| |||||||||||||| |||||||||||||||    
T  27889317 aagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcag 27889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 47077867 - 47077990
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||| |||||||||||| ||| ||  || ||| |||||||||||||| ||||||||||||||   |||  || | ||||||||||||| ||||||    
T  47077867 ggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaacttta--ctctattttacacaagagactgttt 47077964  T
Q  195 acacgatttgaacttgtgacctttca 220  Q
     || || ||||||  |||||||||||    
T  47077965 ccaggacttgaacccgtgacctttca 47077990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 1408542 - 1408485
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 190  Q
    ||||||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||    
T  1408542 gggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggct 1408485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 35203506 - 35203437
Alignment:
Q  151 tattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||||| |||||||||||||||||||  ||||| || || ||||||  |||||||||||    
T  35203506 tattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttca 35203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 38262197 - 38262330
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||| | |||||||||||||||||||||||| |  |   | ||| |||||||| ||||| |||||||||| |||   ||||| | |||||||||||    
T  38262197 aagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacaca 38262296  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    |||| |||||| || || ||||||  ||||||||    
T  38262297 agagactgtttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 194
Target Start/End: Complemental strand, 25198856 - 25198749
Alignment:
Q  88 gcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaaga 186  Q
    |||||| ||||||||||||||| | |||||| | || ||| ||| || ||| ||||||||||| ||| ||||| |||||||| || |||||||||||| |    
T  25198856 gcaacccggtgcactaaagctctcacatacgaagggtctgggaagggatcctaccatttagtgcattatacgcggtcttaccttgtttttttacacaaaa 25198757  T
Q  187 ggctgttt 194  Q
    | ||||||    
T  25198756 gactgttt 25198749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 5180222 - 5180268
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||    
T  5180222 gtgtgttgtacacagtcttaccctgtttttgacacaagaggctgttt 5180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 11741936 - 11741793
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 174  Q
    |||||| |||||||||||| ||||||||| |||||||||||  | |    | | ||| || ||||||||||| ||||||||||||||| |||||||  |     
T  11741936 aaaaactataagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccc--ta 11741839  T
Q  175 ttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||| ||| ||||||| || || ||||||   ||||||||||    
T  11741838 ttttacactagaagctgttttcaggacttgaacccatgacctttca 11741793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 45018924 - 45018958
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||||||||||||||||||||||||||||    
T  45018924 aagggcaacctggtgcactaaagctcccgcatacg 45018958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 12473374 - 12473302
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||  |||||||||||||| |||||||||| ||||| || || ||||||   ||||||||||    
T  12473374 gtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttca 12473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 1524276 - 1524323
Alignment:
Q  173 ttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||    
T  1524276 ttttatacacaagaggctgtttataagacttgaacttgtgacctttca 1524323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 23231680 - 23231585
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 190  Q
    |||||||||||||| ||||||||| | ||   | ||| |||||||| ||||  ||||||| ||||||| |||||| | | ||||||||||||||||    
T  23231680 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggct 23231585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 6736969 - 6736888
Alignment:
Q  138 ccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||| |||||||||| ||||||||||| || |||||| |||||||| |||||  | || ||||||  |||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttg-tttttatacaagaggttgttttgaggacttgaacccgtgacctttca 6736888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 36602581 - 36602547
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  36602581 aagggcaacccggtgcactaaagctcccgcatacg 36602547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 32233188 - 32233271
Alignment:
Q  136 tcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| ||||| | ||||| | ||||||||| ||||||||||||||| ||||| || || ||||||   ||||||||||    
T  32233188 tcccaccatttggtgtaatatacgctgccttaccctg-tttttacacaagaggttgtttccaggacttgaacccatgacctttca 32233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 33500635 - 33500556
Alignment:
Q  98 gcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttt 175  Q
    ||||| ||| ||||||||||| | || | | ||| ||||||||||||||   |||||| |||||||||||||||||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctgttt 33500556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 36720930 - 36720797
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||| ||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  36720930 aagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 36720831  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| || || ||||||  ||||||||    
T  36720830 agaggctgtttccaggacttgaacccgtgacctt 36720797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 28817627 - 28817760
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| | |||||||||||||||||||||| | || | | ||| |||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  28817627 aagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacaca 28817726  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| || || ||||||  ||||||||    
T  28817727 agaggctgtttccaggacttgaacccgtgacctt 28817760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 45071400 - 45071289
Alignment:
Q  82 ataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||||| |||||||| ||||||||||||||| |||| | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  45071400 ataagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttaca 45071302  T
Q  182 caagaggctgttt 194  Q
    |||||||||||||    
T  45071301 caagaggctgttt 45071289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 88 - 217
Target Start/End: Original strand, 29521690 - 29521819
Alignment:
Q  88 gcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagag 187  Q
    |||||| |||||||||||||||||||||||| | || ||| ||  || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  29521690 gcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagag 29521789  T
Q  188 gctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||| || || ||||||  ||||||||    
T  29521790 gctgtttccaggacttgaacccgtgacctt 29521819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 29877227 - 29877118
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    |||||| ||||||||||||| ||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaa 29877128  T
Q  185 gaggctgttt 194  Q
     |||||||||    
T  29877127 aaggctgttt 29877118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 44530283 - 44530150
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||| ||||| |||||||||||||||||||||||| | || |   ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  44530283 aaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 44530184  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||| ||||| || || ||||||  ||||||||    
T  44530183 agaggttgtttccaagacttgaacccgtgacctt 44530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 2626656 - 2626518
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt---ttttac 180  Q
    |||||||| |||||||||| ||||||||||||| | | || ||| ||| |||||||| ||||| |||||||||||||||||||||||||||   ||||||    
T  2626656 aagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttac 2626557  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctttc 219  Q
    |||||||||||||| || || ||||||  ||||||||||    
T  2626556 acaagaggctgtttccaggacttgaacccgtgacctttc 2626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 39460995 - 39461133
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||| |||||||  | ||||||||||||||| ||||| ||||||||||||    
T  39460995 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttaca 39461094  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  39461095 caagaggctgtttccaggacttgaacccgtgacctttca 39461133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 22598292 - 22598155
Alignment:
Q  82 ataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||||||  ||||||||||||||| ||||||||||| |||| | | ||||||||| ||||| || |||||||||||  || ||||||||||||||||||    
T  22598292 ataagggctgcctggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttaca 22598194  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| ||||| || |||||||||  |||||||||||    
T  22598193 caagaggttgtttccaggatttgaacccgtgacctttca 22598155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 35261813 - 35261703
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||||||||| | || |   ||| |||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  35261813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacaca 35261714  T
Q  184 agaggctgttt 194  Q
    |||| ||||||    
T  35261713 agagactgttt 35261703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 12626024 - 12625913
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacac 182  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||  |||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  12626024 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacac 12625925  T
Q  183 aagaggctgttt 194  Q
    |||||| |||||    
T  12625924 aagaggttgttt 12625913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 13160835 - 13160726
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| || ||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  13160835 aagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 13160737  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  13160736 agaggctgttt 13160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 12670251 - 12670385
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||| |||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  12670251 aagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 12670348  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  12670349 agaggctgtttccaggacttgaacccgtgacctttca 12670385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 26954269 - 26954133
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctg-ttttttac 180  Q
    ||||||||||  ||||||||||||||||||||| |  ||| ||| ||| ||||||||||||  || ||||||||||||||| ||||||||| ||||||||    
T  26954269 aagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttac 26954170  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    |||||||||||||| || || ||||||  ||||||||    
T  26954169 acaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 6760958 - 6760823
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | |||||||||||| || ||||||||||||||||||    
T  6760958 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttaca 6760859  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||||| || || ||||||  ||||||||    
T  6760858 caagaggctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 17823710 - 17823575
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||| ||||| | | ||   | ||| |||| ||||||||| ||||||| |||||||||||| |||| ||||||||||    
T  17823710 aagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacaca 17823611  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttc 219  Q
    ||||||||||| || || ||||||  ||||||||||    
T  17823610 agaggctgtttccaggacttgaacccgtgacctttc 17823575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 18164764 - 18164896
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 186  Q
    ||||||| |||||||||||||||||||||||| | || | | |||| |||| || | ||| ||||||||||||||  ||||||||| |||||||||||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctg-tttttacacaaga 18164862  T
Q  187 ggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||| || || ||||||  |||||||||||    
T  18164863 ggctgtttccaggacttgaacccgtgacctttca 18164896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 30454098 - 30454232
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| |||||| |||||||| |||||| ||  |||||||||    
T  30454098 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttg--ttttacaca 30454195  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  30454196 agaggctgtttccaggacttgaacccgtgacctttca 30454232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 5689754 - 5689642
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||||| |||||| | ||   | ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||    
T  5689754 ggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctattt 5689655  T
Q  195 acacgatttgaac 207  Q
    ||| || ||||||    
T  5689654 acaagacttgaac 5689642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 8483950 - 8484062
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||| |||||||||||||||||| | || ||| ||  ||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  8483950 ggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgttt 8484049  T
Q  195 acacgatttgaac 207  Q
     || || ||||||    
T  8484050 ccaggacttgaac 8484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 5135291 - 5135413
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||| || ||||||| |||||||| ||||||| | || | | ||| |||||||||||||| ||||||||||| ||| |||||||| |||||||||||    
T  5135291 aagggcagcccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacaca 5135389  T
Q  184 agaggctgtttacacgatttgaac 207  Q
    ||||||||||| || || ||||||    
T  5135390 agaggctgtttccaggacttgaac 5135413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 10857963 - 10857852
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 182  Q
    |||||||||| |||||||||||||||||||||||| |||| |   |||  |||||||||| || ||||||||| ||||| ||||||||| ||||||||||    
T  10857963 aagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttttacac 10857864  T
Q  183 aagaggctgttt 194  Q
    ||||||| ||||    
T  10857863 aagaggcggttt 10857852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 8897765 - 8897875
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||| ||||||||||||||| | | || | | ||| |||||||||||||| |||||||||||| || |||||||| |||||||||||    
T  8897765 aagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacaca 8897864  T
Q  184 agaggctgttt 194  Q
    || || |||||    
T  8897865 agcggttgttt 8897875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 20870068 - 20869947
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctg 172  Q
    ||||| || |||||||||| |||||||||||||||||||||| |   || |   ||| |||||||||||||  | ||||||||||||||| |||||||||    
T  20870068 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 20869969  T
Q  173 ttttttacacaagaggctgttt 194  Q
    ||||||||||||||| ||||||    
T  20869968 ttttttacacaagagactgttt 20869947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 14018019 - 14018106
Alignment:
Q  134 ggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||| || || ||||||   ||||||||||    
T  14018019 ggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttca 14018106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 16225155 - 16225045
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||| ||||| |||||||||||||||||||||| |   || | | ||| || ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  16225155 aaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttaca 16225056  T
Q  182 caagaggctgt 192  Q
     ||||||||||    
T  16225055 taagaggctgt 16225045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 7136528 - 7136653
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||| |||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||| ||||||||    
T  7136528 aagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttaca 7136627  T
Q  182 caagaggctgtttacacgatttgaac 207  Q
    ||||||| ||||| || || ||||||    
T  7136628 caagaggttgtttccaggacttgaac 7136653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 20284075 - 20284210
Alignment:
Q  89 caacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccc--tgttttttacacaa 184  Q
    ||||| ||||||||||| |||||||||||| | || | | ||| ||||||||||||  || ||||||||||||||| |||||||  | ||||||| ||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaa 20284174  T
Q  185 gaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| || || ||||||  |||||||||||    
T  20284175 gaggctgtttccaggacttgaacccgtgacctttca 20284210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 24365079 - 24365171
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgttt 194  Q
    ||||||||| |||||| | || | | ||| |||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgttt 24365171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 25250658 - 25250523
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| ||||||||||| |||||||||| |   ||   | ||| |||||||||||||  | ||||||||||||||| | |||||| |||||||||    
T  25250658 aagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttaca 25250559  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||| ||||||||| || || |||||| |||||||||    
T  25250558 caataggctgtttccaggacttgaacatgtgacctt 25250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 31457306 - 31457171
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||| | ||||||||| |||||||||||||| | ||  || ||| |||||| |||||||  |||||||||||||| |||  |||  ||||||||||    
T  31457306 aagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcct-atttttacaca 31457208  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||| |||||||| || ||||||  |||||||||||    
T  31457207 agaggttgtttacaggacttgaacccgtgacctttca 31457171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 21070703 - 21070839
Alignment:
Q  89 caacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccc---tgttttttacaca 183  Q
    ||||| ||||||||||| |||||||||||| | || | | ||| ||||||||||||  || ||||||||||||||| |||||||   | ||||||| |||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttataca 21070802  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  21070803 agaggctgtttccaggacttgaacccgtgacctttca 21070839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 44781517 - 44781643
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 193  Q
    ||||||||||||||||||||||| | || ||| ||  |||||||| |||||   ||||||||||| ||| |||||||||| |||||||||||||| ||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  194 tacacgatttgaacttgtgacctttca 220  Q
    | || || ||||||  |||| ||||||    
T  44781617 tccaggacttgaacccgtgaactttca 44781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 44742521 - 44742619
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||| || |||||||||| |||||||||| |||| || |   ||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  44742521 gggcaccccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacaca 44742619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 219
Target Start/End: Complemental strand, 389768 - 389642
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgtttttt--acacaagaggctg 191  Q
    ||||||||||||||| |||||||| | || | | ||||||| ||||| ||||| ||||||||||||||  |||||||||||||||  |||||||||| ||    
T  389768 ggtgcactaaagctctcgcatacgcagggtcag-gaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtg 389670  T
Q  192 tttacacgatttgaacttgtgacctttc 219  Q
    ||| || || ||||||  ||||||||||    
T  389669 tttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 17250888 - 17250985
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 191  Q
    |||||||||||||||  |||||| | ||   | |||||||||||||||||  | ||||||||||||| | |||| |||||||||||||||||||||||    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctg 17250985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 23286374 - 23286432
Alignment:
Q  132 agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgt 192  Q
    ||||||||||||||| |||||||||||||||  ||||||||  ||||||||||||||||||    
T  23286374 agggtcccaccatttggtgtattgtacgcagctttaccctg--ttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 40604918 - 40605006
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    ||||||||||||||||||||||||| |||| | || |||||  ||| ||||||||||||||||||||  |||| ||  ||||||||||||    
T  40604918 ggtgcactaaagctcccgcatacgt-agggtttcggaagggatccatcatttagtgtattgtacgcaaccttatccaattttttacacaa 40605006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 43942411 - 43942348
Alignment:
Q  133 gggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||   ||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  43942411 gggtcccaccatttttggtgtattgtacgcagccttaccctgtttttgacataagaggctgttt 43942348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 35106008 - 35105921
Alignment:
Q  134 ggtcccaccatt-tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||| | ||||||||||||||| ||||| || | |||||||||||||| ||||| || || ||||||  |||||||||||    
T  35106008 ggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttca 35105921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 28407537 - 28407475
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt 146  Q
    |||||||||| |||||| ||||||||||||||||||| || | | ||| ||||||||||||||    
T  28407537 aagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 11748366 - 11748297
Alignment:
Q  151 tattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| ||||||||||| |||||||| |||||||||||| || || ||||||  ||||| |||||    
T  11748366 tattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttca 11748297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 20869563 - 20869633
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| ||| |||||||||||||  |||||||||||||||| || || ||||||  |||||||||||    
T  20869563 gtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 20869633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 26102651 - 26102578
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgta 157  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||    
T  26102651 aagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 16013590 - 16013511
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgca 161  Q
    |||| ||||| |||||||||||||||||||||| | | || ||| ||| ||||| |||||  ||||||||||||||||||    
T  16013590 aaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 19729462 - 19729382
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 176  Q
    |||||||| |||||||| ||| | | || | | ||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  19729462 gtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 30962847 - 30962910
Alignment:
Q  157 acgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||| | |||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttca 30962910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 23000229 - 23000329
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||||||||||||||| ||          ||| |||||||||||||| |||||||||| | |  |||||| || ||||||||||    
T  23000229 aagggcaacccggtgcactaaagctcccgcatccgg---------gaaggggtcccaccatttggtgtattgtatggaaccttaccgtg-tttttacaca 23000318  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  23000319 agaggctgttt 23000329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 27468093 - 27468127
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  27468093 aagggcaacccggtgcactaaagctcccgcatacg 27468127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 36918199 - 36918122
Alignment:
Q  143 atttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||| ||||||||||| ||| |||||||||||||||||| ||||   ||||| ||  | |||||| ||||||||||||    
T  36918199 atttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttca 36918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 27508046 - 27508010
Alignment:
Q  82 ataagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  27508046 ataaggacaacccggtgcactaaagctcccgcatacg 27508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 42083748 - 42083836
Alignment:
Q  133 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||||| | | || ||||||||| ||| |||  |||||||||||| ||||||||| || || ||||||  |||||||||||    
T  42083748 gggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttca 42083836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 8455317 - 8455450
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||| ||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  8455317 aagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacaca 8455416  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| || || ||||||  ||||||||    
T  8455417 agaggctgtttccaggacttgaacccgtgacctt 8455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 84 - 207
Target Start/End: Complemental strand, 9671313 - 9671192
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  9671313 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 9671216  T
Q  184 agaggctgtttacacgatttgaac 207  Q
    ||||||||||| || |||||||||    
T  9671215 agaggctgtttccaggatttgaac 9671192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 32781298 - 32781425
Alignment:
Q  92 cctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 191  Q
    |||||||||| |||||||||||||||  | || ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  32781298 cctggtgcac-aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttg 32781396  T
Q  192 tttacacgatttgaacttgtgacctttca 220  Q
    ||| |  || ||||||| |||||||||||    
T  32781397 tttccgagacttgaactcgtgacctttca 32781425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 10543834 - 10543696
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||||||||||||   ||||||||||||||| ||||||||||||||||||    
T  10543834 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 10543735  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||| |||| || || ||||||  |||||||||||    
T  10543734 caagaggccgtttccaggacttgaacccgtgacctttca 10543696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 10546297 - 10546160
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacac 182  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||| ||||| ||    
T  10546297 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatac 10546198  T
Q  183 aagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||| ||||| || || ||||||  |||||||||||    
T  10546197 aagaggatgtttccaggacttgaacccgtgacctttca 10546160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 11514569 - 11514437
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||| | |||||||||||||||||||||||| | || ||| ||| |||||||||||||| ||||||||||||||| |||||  |||||||||||||    
T  11514569 aagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaa-gggtcccaccatttggtgtattgtacgcagccttactttgttttttacaca 11514471  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| || || ||||||  ||||||||    
T  11514470 agaggctgtttccaggagttgaacccgtgacctt 11514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 14444862 - 14444730
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||||||||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||| |||| ||| |||||||||| |||||||||    
T  14444862 aagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgt-ttttacaca 14444764  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| || || ||||||  ||||||||    
T  14444763 agaggctgtttccaggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 14530454 - 14530316
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | |||||||||||| || |||||||||||||||| |    
T  14530454 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttata 14530355  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  14530354 caagaggctgtttccaggacttgaacccgtgacctttca 14530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 40762235 - 40762345
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||||||||||| |||||| | || |   |||||||||||||||||| |||||||||||| || ||||||| ||||||||||||    
T  40762235 aagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacaca 40762334  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  40762335 agaggctgttt 40762345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 36871625 - 36871517
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||| |||| |||||    
T  36871625 aagggcaacccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttcacaca 36871528  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  36871527 agaggctgttt 36871517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 25632643 - 25632544
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||||||||||||||   | ||| |  ||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  25632643 aagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgttttttacaca 25632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 21779262 - 21779396
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||  |||||||||  |||||||||    
T  21779262 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacaca 21779359  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||| | || || ||||||  |||||||||||    
T  21779360 agaggctgtctccaggacttgaacccgtgacctttca 21779396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 23397898 - 23397764
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| ||| || | | ||| |||||||||||||| |||||||||||| || |||||||  | |||||||||    
T  23397898 aagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccc--tattttacaca 23397801  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||   ||||||||||    
T  23397800 agaggctgtttccaggacttgaacccatgacctttca 23397764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 12023969 - 12024055
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| || || ||||||  |||||||||||    
T  12023969 gggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacttgaacccgtgacctttca 12024055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 23145744 - 23145835
Alignment:
Q  129 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||| |||||| || || ||||||  |||||||||||    
T  23145744 gaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 23557534 - 23557625
Alignment:
Q  129 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||| |||||| || || ||||||  |||||||||||    
T  23557534 gaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23557625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 24200624 - 24200762
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| ||||||||||||||| | |||||  | || | | ||| || |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  24200624 aagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 24200723  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  ||||| |||||    
T  24200724 caagaggctgtttccaggacttgaacccgtgacttttca 24200762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 25249730 - 25249871
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 174  Q
    ||||| || |||||||||| ||||||||||||||| |||||||| | ||   | ||| || ||||||||||| ||||||||||||||| ||||||||| |    
T  25249730 aaaaaaaaaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctg-t 25249828  T
Q  175 ttttacacaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    || |||||||||| |||||| || || ||||||  ||||||||    
T  25249829 ttgtacacaagagactgtttccatgacttgaacccgtgacctt 25249871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 30826169 - 30826061
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||| ||| |||||||||||||||||||||||| ||| || ||| ||| |||| ||||||||| ||||||||||||||  ||||||||  ||||||||||    
T  30826169 aaggacaatctggtgcactaaagctcccgcatatgtagggtctgggaa-gggttccaccatttggtgtattgtacgcaaccttaccct-atttttacaca 30826072  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  30826071 agaggctgttt 30826061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 17668136 - 17668003
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||  ||||| | ||   | ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  17668136 aagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacaca 17668037  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||| | ||| || || ||||||  ||||||||    
T  17668036 agaggttctttccaggacttgaacccgtgacctt 17668003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 19977715 - 19977850
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||| || |||||||||||||||||||||||||  ||||   | ||| || ||||||||||| ||||||||||||||  |||| ||| ||||||||| |    
T  19977715 aagggtaatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaa 19977814  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttc 219  Q
    ||||||||||| ||  | ||||||  ||||||||||    
T  19977815 agaggctgtttccagaacttgaacccgtgacctttc 19977850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 14544200 - 14544087
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtg--tattgtacgcagtcttaccctgttttt-tac 180  Q
    ||||||||| ||||||||||||||||||||||||| | || |   ||| |||||| |||||||  ||  ||||| ||||||||||||||||||||| |||    
T  14544200 aagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttctac 14544101  T
Q  181 acaagaggctgttt 194  Q
    ||||||||||||||    
T  14544100 acaagaggctgttt 14544087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 31158451 - 31158552
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgt 192  Q
    |||| ||||||||||||||||||| | || ||| ||| ||||||||||||||   || ||||||| ||| |||||||||||||||||| |||||||||||    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgt 31158550  T
Q  193 tt 194  Q
    ||    
T  31158551 tt 31158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 4516354 - 4516462
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 185  Q
    ||||| || ||| |||||||||| || |||||| | || | | ||| ||||||||||| || |||||||||||||||  || ||||||||||||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaag 4516453  T
Q  186 aggctgttt 194  Q
    |||||||||    
T  4516454 aggctgttt 4516462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 17896394 - 17896283
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccct-gttttttacac 182  Q
    |||||||||  | ||||||||||||||| |||||| | || | | ||| |||||||||||||| || |||||||||||| ||||||||  ||||||||||    
T  17896394 aagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacac 17896295  T
Q  183 aagaggctgttt 194  Q
    |||||| |||||    
T  17896294 aagaggttgttt 17896283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 21377123 - 21377210
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||| |||||  | || ||||||| || ||||||||    
T  21377123 gggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttca 21377210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 25079718 - 25079829
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 182  Q
    |||||||||| |||||||||||||||  ||||||| | || | | ||| |||||||||||||  ||||||||||||||  |||||| || ||||||||||    
T  25079718 aagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacac 25079817  T
Q  183 aagaggctgttt 194  Q
    |||||| |||||    
T  25079818 aagaggttgttt 25079829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 39914307 - 39914417
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 182  Q
    |||||||||| | |||||||||||||||||||||| | || | | ||| |||||||||||||  ||||||||||| ||  ||||||||| ||||||||||    
T  39914307 aagggcaacccgatgcactaaagctcccgcatacgcagggtcag-gaaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacac 39914405  T
Q  183 aagaggctgttt 194  Q
    |||||| |||||    
T  39914406 aagaggttgttt 39914417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 99281 - 99400
Alignment:
Q  99 cactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacac 198  Q
    |||||||||||||||||||  | || ||| ||| |||| ||||||||| ||||||||||||||| ||| || ||||||||  ||||||||||||||  |     
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgtttttt--acaagaggctgtttctag 99378  T
Q  199 gatttgaacttgtgacctttca 220  Q
    || ||||||  |||||||||||    
T  99379 gacttgaacccgtgacctttca 99400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 17623698 - 17623588
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||||  ||||||||||||| || |||||| | |    | ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  17623698 aagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacaca 17623599  T
Q  184 agaggctgttt 194  Q
    ||||| |||||    
T  17623598 agaggttgttt 17623588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 178
Target Start/End: Complemental strand, 44643657 - 44643563
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt 178  Q
    ||||||| || |||||||||| ||||||||||||| | || ||| ||| |||||||||||||| ||  ||||||||||| ||||| |||||||||    
T  44643657 aagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttt 44643563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 27573754 - 27573646
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| | ||||||||||||||| |||||  | ||  || |||| ||| ||||||||| ||||||||||||||| |||||| || ||| ||||||    
T  27573754 aagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatg-tttatacaca 27573656  T
Q  184 agaggctgtt 193  Q
    ||||||||||    
T  27573655 agaggctgtt 27573646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 40416872 - 40417005
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||||||||| |||||| | | || |    ||||||||||| || || ||||||||||| ||| ||| |||||||||||| |||    
T  40416872 aagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttataca 40416971  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||| ||||| || || ||||||  ||||||||    
T  40416972 agaggttgtttccatgacttgaacccgtgacctt 40417005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 5450371 - 5450283
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| ||| ||||||||||||||| |||||| || |||||||||||||||| ||||| || || ||||||  |||||||||||    
T  5450371 gggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttca 5450283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 7214667 - 7214532
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    ||||||||||||||||||| ||| |||||||| |  | | | ||| || || ||||||||   ||||||||||||||| |||||||||| ||||||||||    
T  7214667 ggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaa 7214568  T
Q  185 gaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||| |||||| || || ||||||   ||||||||||    
T  7214567 gagactgtttccaagacttgaacccatgacctttca 7214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 45235820 - 45235955
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacacaa 184  Q
    ||||||| |||| |||||||||||| ||||||||| || |||  || |||||||||||||| |||||||  ||| || |||||||| || ||||||| ||    
T  45235820 gggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaa 45235919  T
Q  185 gaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||| ||||||  | || ||||||| |||| ||||||    
T  45235920 gagactgtttctaggacttgaactcgtgatctttca 45235955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 44521392 - 44521510
Alignment:
Q  102 taaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgat 201  Q
    ||||||||||| ||| | || | ||| ||| || |||| |||||| ||||||| || |||| |||||| |||||||||||||||||  ||||| || |||    
T  44521392 taaagctcccgtatatgcaatgtctgggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagat 44521491  T
Q  202 ttgaacttgtgacctttca 220  Q
    ||||||  |||||||||||    
T  44521492 ttgaacgcgtgacctttca 44521510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 5841164 - 5841052
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||  |||||||||||||||||||||| |   || | | ||| |||||||||||||  |  |||||||||||||  |||||||| |||||||||    
T  5841164 aagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttaca 5841065  T
Q  182 caagaggctgttt 194  Q
    ||| |||||||||    
T  5841064 caaaaggctgttt 5841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 19615059 - 19614990
Alignment:
Q  151 tattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||||||||||||||||| |||||||| |||||  | || ||||||  |||||||||||    
T  19615059 tattgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttca 19614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 22371139 - 22371059
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 216  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||   ||| |||||||||| || || ||||||  |||||||    
T  22371139 gggtcccaccatttggtgtattgtacgcagccttaccctgttttt---acacgaggctgtttccaggacttgaacccgtgacct 22371059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 12315712 - 12315787
Alignment:
Q  143 atttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttc 219  Q
    |||| ||||||||||| |||||||||||||||||||| | |||| ||||||| || || ||||||| ||||||||||    
T  12315712 atttggtgtattgtacacagtcttaccctgtttttta-ataagaagctgtttccatgacttgaactcgtgacctttc 12315787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 29419970 - 29420026
Alignment:
Q  164 cttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||||||||||||| ||||| || || ||||||| |||||||||||    
T  29419970 cttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttca 29420026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 26684632 - 26684759
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccct-gttttttacacaagagg-ctgt 192  Q
    |||||| ||||||||||||||||| | ||   | |||  |||||||||||||||| |||||||||||| |||||| |  |||||||||||||||| ||||    
T  26684632 ggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttacacaagaggtctgt 26684731  T
Q  193 ttacacgatttgaacttgtgacctttca 220  Q
    || || || || ||| | ||||||||||    
T  26684732 tttcaggacttaaacctttgacctttca 26684759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 24890533 - 24890451
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt 178  Q
    ||||||||||||||| ||||||| | || | | ||| ||||||||||| || |||||||||| |||| |||||| ||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttttt 24890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 33795400 - 33795283
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtatt-gtacgcagtcttaccctgttttttacacaagaggctgtttacacgat 201  Q
    |||||||||||||||  | || ||| ||| ||||||||||||   ||||||| |||||||| ||||||||||||||||| ||||||| ||||| |  ||     
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccaccatag-gtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggac 33795302  T
Q  202 ttgaacttgtgacctttca 220  Q
    ||||||  |||||||||||    
T  33795301 ttgaacccgtgacctttca 33795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 13245096 - 13245181
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttacc 169  Q
    |||||||||| | | |||||||||||||| ||| | | || | | ||| |||||||||||||||||||| ||||||||| ||||||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc 13245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 17471673 - 17471572
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctg-ttttttacacaagaggctgt 192  Q
    ||||||||||| |||||||||| | | || | | ||| ||||| || ||||| | | ||||||||||||||||| |||| ||||||||||||||||||||    
T  17471673 ggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggctgt 17471574  T
Q  193 tt 194  Q
    ||    
T  17471573 tt 17471572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 31821393 - 31821478
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||| ||||| ||||||||||| ||  |||||||| |||||||||||   ||||||||  |||| ||||||| |||||||||||    
T  31821393 gggtcccatcatttggtgtattgtacacaaccttaccctattttttacaca--cggctgtttctacgacttgaactcgtgacctttca 31821478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 40579747 - 40579783
Alignment:
Q  81 aataagggcaacctggtgcactaaagctcccgcatac 117  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40579747 aataagggcaacccggtgcactaaagctcccgcatac 40579783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 15296475 - 15296518
Alignment:
Q  151 tattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||| |||||||||| |||||||||| |||||||||    
T  15296475 tattgtacgcagccttaccctgtattttacacaacaggctgttt 15296518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 24860000 - 24860067
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcag 162  Q
    |||||||||||||||||||||||| | || | | ||| |||| | ||||||| |||||||||||||||    
T  24860000 ggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcag 24860067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 8576029 - 8575995
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||||||||||||||||||||| ||||||    
T  8576029 aagggcaacctggtgcactaaagctcccacatacg 8575995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 22371246 - 22371212
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  22371246 aagggcaacccggtgcactaaagctcccgcatacg 22371212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 17705565 - 17705496
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| ||| ||||| ||||| |||||||||||||| |||| || || ||||||  ||||||||    
T  17705565 gtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgacctt 17705496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 59113 - 58975
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| | |||||||||||||||||||||| |  | ||| ||| ||||||||||||||   |||||||||||||||||||||||||||||||| |    
T  59113 aagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttata 59014  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  59013 caagaggctgtttccaggacttgaacccgtgacctttca 58975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 29355856 - 29355994
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||| |||||    
T  29355856 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttaca 29355955  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  29355956 caagaggctgtttccaggacttgaacccgtgacctttca 29355994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 12221915 - 12222054
Alignment:
Q  84 aagggcaacctggtgcactaaa-gctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttac 180  Q
    |||||||||| ||||||||||| ||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  12221915 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 12222014  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||||| || || ||||||  |||||||||||    
T  12222015 acaagaggctgtttccaagacttgaacccgtgacctttca 12222054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 1354758 - 1354892
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  1354758 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 1354855  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  1354856 agaggctgtttccaggacttgaaccagtgacctttca 1354892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 9161258 - 9161121
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||||||||||||||||||||||| ||||||||| | || | | ||| ||||||||||||  ||  |||||||||||||| ||||| ||| ||||||||    
T  9161258 aagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctg-tttttaca 9161160  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || |||||| ||||||||||||    
T  9161159 caagaggctgtttccaggacttgaacctgtgacctttca 9161121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 1347096 - 1346962
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  1347096 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 1346999  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    || |||||||| || || ||||||  |||||||||||    
T  1346998 agtggctgtttccaggacttgaacccgtgacctttca 1346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 32728158 - 32728293
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||| ||||||||||||| ||||||||||||| || ||| ||||||| || || |||| || |||||||| |||||||||||||||||||||| |    
T  32728158 aagggcaacatggtgcactaaagttcccgcatacgtagggtctgggaaagggacc-actatttggtatattgtacacagtcttaccctgttttttacata 32728256  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||| ||||| ||  | |||||  ||||||||||||    
T  32728257 agaggttgtttccaaaacttgaatctgtgacctttca 32728293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 3815084 - 3815214
Alignment:
Q  90 aacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggc 189  Q
    |||| |||||||||||||| ||||||||||| ||   | |||||||||||||||||| ||||||||||||||||| |||| | |||||||||||| || |    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtc 3815183  T
Q  190 tgtttacacgatttgaacttgtgacctttca 220  Q
    ||||| || || ||||||  ||||| |||||    
T  3815184 tgtttccaggacttgaacccgtgacatttca 3815214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 18277194 - 18277328
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||| ||||| |||||| |||||||||||||||||||  | ||  ||| |||||||||||||| ||||  ||||| ||  ||||||||| ||||||||||    
T  18277194 aaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacaca 18277293  T
Q  184 agaggctgtttacacgatttgaacttgtgaccttt 218  Q
    ||||||||||| || |||||||||  |||||||||    
T  18277294 agaggctgtttccaagatttgaacccgtgaccttt 18277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 20400755 - 20400665
Alignment:
Q  130 aaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||  | |||||| ||||||||||||    
T  20400755 aaagggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttca 20400665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 7947384 - 7947509
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||||| |||||| |||| | | ||| ||| |||||||||| | |||||||||||||| ||||||||| |||||||||| |||| |||||    
T  7947384 gtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgttt 7947483  T
Q  195 acacgatttgaacttgtgacctttca 220  Q
     || || ||||||  |||||||||||    
T  7947484 ccaggagttgaaccggtgacctttca 7947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 1941940 - 1941876
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttaca 197  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  1941940 gggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttaca 1941876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 2166411 - 2166549
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||| |||  || || | | ||| |||||||||||||  | ||||||||||||||  |||| ||||| |||||||    
T  2166411 aagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttaca 2166510  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| ||||| || || ||||||  |||||||||||    
T  2166511 caagaggttgtttccaggacttgaacccgtgacctttca 2166549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 2178044 - 2178182
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||| |||  || || | | ||| |||||||||||||  | ||||||||||||||  |||| ||||| |||||||    
T  2178044 aagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttaca 2178143  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||| ||||| || || ||||||  |||||||||||    
T  2178144 caagaggttgtttccaggacttgaacccgtgacctttca 2178182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 26097292 - 26097184
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||  ||||| ||||||||||||||| |||||||||  |||||||||    
T  26097292 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctg--ttttacaca 26097195  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  26097194 agaggctgttt 26097184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 25557857 - 25557749
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||| ||  ||||| ||||||||||||||| |||||||||  |||||||||    
T  25557857 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctg--ttttacaca 25557760  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  25557759 agaggctgttt 25557749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 6024303 - 6024257
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6024303 gtgtattgtacgcagtcttaccatgttttttacacaagaggctgttt 6024257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 23240837 - 23240959
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 195  Q
    ||||||||||||||||||||||| |  | |   ||| ||||||||||| || || |||||||||||  |||||||||||||  ||||||||||||||||     
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctgtttt--acacaagaggctgtttc 23240934  T
Q  196 cacgatttgaacttgtgacctttca 220  Q
    || || ||| || ||||||||||||    
T  23240935 caggacttgcacctgtgacctttca 23240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 33138921 - 33138844
Alignment:
Q  130 aaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaac 207  Q
    ||||||||||||||||| ||||||||||||| | ||||| |||||||||| |||||||| ||||| || || ||||||    
T  33138921 aaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaac 33138844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 12889496 - 12889424
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| |||| ||| |||||||||| |||||||||||||||| || || |||||| ||||||||||||    
T  12889496 gtgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttca 12889424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 24097711 - 24097579
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||||||  |||||||||| ||||||||| | || | | ||| |||||||||||||| ||    |||| |||| |||||||||||||||| |||    
T  24097711 aagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggt----tgtaagcagccttaccctgttttttataca 24097616  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||| ||  | || || |||| |||||||||||    
T  24097615 agaggctggttcgaggacttaaactcgtgacctttca 24097579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 8409311 - 8409241
Alignment:
Q  150 gtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| || || |||||   |||||||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttca 8409241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 12886047 - 12885967
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcag 162  Q
    |||||||||| ||||||||||||||||| |||||| | || ||| ||| |||||||||||  ||| |||||||||||||||    
T  12886047 aagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 24751135 - 24751176
Alignment:
Q  144 tttagtgtattgtacgcagtcttaccctgttttttacacaag 185  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  24751135 tttagtgtattgtacgcagtcttaccctattttttacacaag 24751176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 32579553 - 32579437
Alignment:
Q  90 aacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggc 189  Q
    ||||||| | ||||||||||||||||| | | || ||| ||| |||||||||||||| | ||||||||||||| |||||| |  |||||| || ||||||    
T  32579553 aacctggagtactaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgt-atttttataccagaggc 32579455  T
Q  190 tgtttacacgatttgaac 207  Q
    ||||| || || ||||||    
T  32579454 tgtttccaggacttgaac 32579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 383761 - 383837
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgc 160  Q
    |||||||||| |||| ||| ||||||||||||||| | || ||| ||| ||||||||| |||| |||||||||||||    
T  383761 aagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 14553626 - 14553511
Alignment:
Q  105 agctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatt 202  Q
    |||||||||||||  | || || |||| |||||||||||  ||| ||||||| ||| ||| |||||||| |||||||||||||| ||| ||| || || |    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  203 tgaacttgtgaccttt 218  Q
    ||||| ||||||||||    
T  14553526 tgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 13905026 - 13905116
Alignment:
Q  129 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| ||||||| ||| |||||| |||| |||||||||||||||||||||||||  |||| || || |||| |  |||||||||||    
T  13905026 gaaagggtcc-accatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttca 13905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 17432482 - 17432338
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt--agtgtattgtacgcagtcttaccct------gttt 175  Q
    |||||||||| ||||||||||||||||||||| |  | |  | | |||| |||| ||||||||  |||||||||||| ||| ||||||||      ||||    
T  17432482 aagggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgttt 17432383  T
Q  176 tttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| | ||||| || || |||||| ||||||||||||    
T  17432382 tttacacaagatgttgtttccaggacttgaacctgtgacctttca 17432338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 28007711 - 28007628
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgaccttt 218  Q
    |||||||| ||||| ||||||||||||||| || ||||||  |||||||||||||||| ||| || || ||||||  |||||||||    
T  28007711 gggtcccagcatttggtgtattgtacgcagcctgaccctg--ttttacacaagaggctctttccaggacttgaacccgtgaccttt 28007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 15866052 - 15866174
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 195  Q
    |||||||| || ||||||| ||| | || | | ||| |||||||||||||| |||||||  ||||||  ||||||||||||||||  ||||||||||||     
T  15866052 gtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttc 15866149  T
Q  196 cacgatttgaacttgtgacctttca 220  Q
    || || ||||||   ||||||||||    
T  15866150 caggaattgaacccatgacctttca 15866174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 23930128 - 23930205
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgca 161  Q
    |||||||||  |||||||||||||||||||||| | | || | | ||| |||||||||||| | ||||||||||||||    
T  23930128 aagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 3116121 - 3116212
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtc 164  Q
    ||||| || |||||||| | |||| ||||||||||||||||||| |||| | | ||| |||||||||||  ||| ||||||||| |||||||    
T  3116121 aaaaaaaaaaagggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcagtc 3116212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 194
Target Start/End: Original strand, 9671161 - 9671196
Alignment:
Q  159 gcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||| |||||||||||||||||||||||||||||||    
T  9671161 gcagccttaccctgttttttacacaagaggctgttt 9671196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 13267859 - 13267788
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattg 155  Q
    |||||||||| |||||||| ||||||||||||||| | || |   ||| |||||||||||||| ||||||||    
T  13267859 aagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 6808538 - 6808496
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatac 117  Q
    ||||| || |||||||||| |||||||||||||||||||||||    
T  6808538 aaaaagaaaaagggcaacccggtgcactaaagctcccgcatac 6808496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 12892143 - 12892111
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcata 116  Q
    |||||||||| ||||||||||||||||||||||    
T  12892143 aagggcaacccggtgcactaaagctcccgcata 12892111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 13628316 - 13628368
Alignment:
Q  143 atttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgttt 194  Q
    ||||||||||||||||||| | ||||| || ||||||| ||||||||||||||    
T  13628316 atttagtgtattgtacgcaattttaccttgtttttttaaacaagaggctgttt 13628368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 217
Target Start/End: Complemental strand, 24449034 - 24448891
Alignment:
Q  74 taaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgt 173  Q
    |||||| || |||||||||| |||||||||||||||| ||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||| |    
T  24449034 taaaaaaaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctat 24448935  T
Q  174 tttttacacaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| ||||||||| || || ||||||  ||||||||    
T  24448934 tttttacacaaaaggctgtttccaggacttgaacccgtgacctt 24448891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 38879717 - 38879579
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||| |    
T  38879717 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttata 38879618  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  38879617 caagaggctgtttccaggacttgaacccgtgacctttca 38879579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 16880648 - 16880757
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||| |||| |||||||||||||||||||||||| | || | | |||  |||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  16880648 aagggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacaca 16880747  T
Q  184 agaggctgtt 193  Q
    ||||||||||    
T  16880748 agaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 32703556 - 32703422
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  32703556 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 32703459  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  32703458 agaggctgtttccaggacttgaacccgtgacctttca 32703422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 28516434 - 28516571
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 182  Q
    |||||||||||||| |||||||||||| |||| || | || ||| ||| |||||||||||||| | |||||||||||||| | || ||||||||||||||    
T  28516434 aagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacac 28516533  T
Q  183 aagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||| ||||| || || ||||||  |||||||||||    
T  28516534 aagaggatgtttccaagacttgaacccgtgacctttca 28516571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 41014452 - 41014320
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||||||| |   || |   ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  41014452 aagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 41014354  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| || || ||||||  ||||||||    
T  41014353 agaggctgtttccaggacttgaacccgtgacctt 41014320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 27328875 - 27328750
Alignment:
Q  97 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||| ||||||||||||||||| | ||   | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgttt 27328776  T
Q  195 acacgatttgaacttgtgacctttca 220  Q
     || || |||||| ||||||||||||    
T  27328775 ccaggacttgaacctgtgacctttca 27328750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 4619105 - 4619240
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| ||||||||||||||| |||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  4619105 aagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 4619204  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||| ||| || || ||||||  ||||||||    
T  4619205 caagaggctatttccaggacttgaacccgtgacctt 4619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 8169985 - 8170118
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||| || |||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  8169985 aagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 8170082  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttc 219  Q
    | ||||||||| || || ||||||  ||||||||||    
T  8170083 aaaggctgtttccaggacttgaacccgtgacctttc 8170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 43334338 - 43334200
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctg-ttttttac 180  Q
    |||||||||| ||||||||||||||||||||| || | || | | ||| |||||||||||  ||| ||||||||||||||| ||||||||| ||||||||    
T  43334338 aagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttac 43334240  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||| |||||||||| || || ||||||  |||||||||||    
T  43334239 acaggaggctgtttccaggacttgaacccgtgacctttca 43334200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 7097761 - 7097870
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||| | ||||||||||||||||||||||||| | ||   | ||| ||||| |||||||| ||||||||||||||  ||||||||| ||||||||||    
T  7097761 aagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctg-tttttacaca 7097859  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  7097860 agaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 191
Target Start/End: Original strand, 13801768 - 13801877
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| ||||||||||||||| |||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  13801768 aagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 13801867  T
Q  182 caagaggctg 191  Q
    ||||||||||    
T  13801868 caagaggctg 13801877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 35710445 - 35710311
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | |  | | ||| |||||||||||||| |||||||| |||||| |||||||  | |||||||||    
T  35710445 aagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccc--tattttacaca 35710348  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  35710347 agaggctgtttccaggacttgaacccgtgacctttca 35710311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 19142956 - 19143071
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 195  Q
    |||||||||| |||||||||||| | || | | ||| |||||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||| |||||     
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctg-tttttacacaagaggttgtttc 19143054  T
Q  196 cacgatttgaacttgtg 212  Q
    || || |||||| ||||    
T  19143055 caggacttgaacctgtg 19143071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 43574729 - 43574637
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagag 187  Q
    ||||| |||||||||||||||||| | || | | ||| |||||||||||||| || |||||||||||| ||||||||||||| ||||||||||    
T  43574729 ggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagag 43574637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 29334530 - 29334419
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt-tagtgtattgtacgcagtcttaccctgttttttacac 182  Q
    ||||||| || |||||| ||||| |||| |||||| | || | | ||| ||||||||||||| | ||||||||||||||| |||||| ||||||||||||    
T  29334530 aagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttacac 29334431  T
Q  183 aagaggctgttt 194  Q
    ||||||||||||    
T  29334430 aagaggctgttt 29334419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 30006456 - 30006349
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 186  Q
    ||||||| ||||||||||||||||||||||| || |  | | ||| |||||||||||||||||||| ||||| ||| ||||||||||| |||| | ||||    
T  30006456 ggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataaga 30006357  T
Q  187 ggctgttt 194  Q
    || |||||    
T  30006356 ggttgttt 30006349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 7368528 - 7368422
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 185  Q
    |||||||| ||||||||| ||||||| |||| | | || | | ||| ||||||||||| || ||||||||||||||| |||||||||  |||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctg--ttttacacaag 7368431  T
Q  186 aggctgttt 194  Q
    |||||||||    
T  7368430 aggctgttt 7368422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 20135740 - 20135628
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||| ||||||| ||||| |   || | | ||| |||||||||||||  | ||||||||||||||| |||||| |||||||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T
Q  182 caagaggctgttt 194  Q
    |||||||||||||    
T  20135640 caagaggctgttt 20135628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 22187421 - 22187283
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||||| |||||||||||||| ||||| ||| ||  || ||| ||||| ||   |||   |||||||||||||||||||| | |||||||||||    
T  22187421 aagggcaacctgatgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttaca 22187322  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || || |||  |||||||||||    
T  22187321 caagaggctgtttccaggacttaaaccggtgacctttca 22187283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 12006328 - 12006441
Alignment:
Q  83 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctgttttttac 180  Q
    ||||||||||  |||||||||||||||||||||| | | || ||| ||| ||||||||||||  || |||||||||| | || |||||||| ||||||||    
T  12006328 taagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttac 12006427  T
Q  181 acaagaggctgttt 194  Q
    | |||||| |||||    
T  12006428 ataagaggttgttt 12006441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 16957448 - 16957374
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtac 158  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||||||||    
T  16957448 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 194
Target Start/End: Complemental strand, 2838890 - 2838803
Alignment:
Q  106 gctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||| | || | | ||| || ||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagatgctgttt 2838803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 34154815 - 34154903
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg 172  Q
    |||||||||| ||||||||| |||| ||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||    
T  34154815 aagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 34154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 42924899 - 42924971
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||  ||||||||||||||||||||||| | ||||| || || ||||||| |||||||||||    
T  42924899 gtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttca 42924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 34074620 - 34074699
Alignment:
Q  141 ccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||| |||||||| |||||  |||||  ||||||||||||||||||||||||  | || |||||||||||||||||||    
T  34074620 ccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttca 34074699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 1405276 - 1405188
Alignment:
Q  129 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    |||||||||||||||||| ||||||||||||||  ||||| || ||||||| | |||||| ||||| || || ||||||  ||||||||    
T  1405276 gaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca 143  Q
    ||||||| |||||||||||||||||||||||||| || ||| ||| |||||||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 36770864 - 36770806
Alignment:
Q  134 ggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 193  Q
    |||||||||||||||||||||||| || | |||||| ||||||||||| |||||||||||    
T  36770864 ggtcccaccatttagtgtattgtatgc-ggcttaccttgttttttacataagaggctgtt 36770806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 41426033 - 41425982
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    ||||||||||| || |||||||||| |||| |||||||||||||||||||||    
T  41426033 gggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaa 41425982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 208977 - 209062
Alignment:
Q  133 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgaccttt 218  Q
    |||||||||||||| | ||||||| | |||| ||||||||||||| ||||||||||| ||||  || || |||||||||||||||||    
T  208977 gggtcccaccattttggtgtattgaatgcagccttaccctgtttt-tacacaagaggttgttgccaggacttgaacttgtgaccttt 209062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 22600569 - 22600488
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    |||||||||||||||| | |  | | ||| || ||||||||||| ||||||||||| ||| |||||||||| ||||||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaa 22600488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 22907915 - 22907975
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||| |||||||||| |||  ||||| ||| |||||||||||||||||||||    
T  22907915 gggtcccaccatttggtgtattgtatgcaaccttactctg-tttttacacaagaggctgttt 22907975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 29184055 - 29184096
Alignment:
Q  77 aaacaataagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  29184055 aaactataagggcaacccggtgcactaaagctcccgcatacg 29184096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 22025597 - 22025541
Alignment:
Q  164 cttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||||||||||||||||||| || || ||||||   ||||||||||    
T  22025597 cttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttca 22025541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 37024626 - 37024691
Alignment:
Q  153 ttgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| |||||||||||||  |||||||||||||||| || || ||||||  |||||||||||    
T  37024626 ttgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 37024691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 24323725 - 24323816
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||   | || ||| ||| ||||||||| |||| | ||||| ||||||  |||||||||| |||||||||||||| |||||    
T  24323725 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgttt 24323816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 24360349 - 24360440
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||   | || ||| ||| ||||||||| |||| | ||||| ||||||  |||||||||| |||||||||||||| |||||    
T  24360349 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgttt 24360440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 116
Target Start/End: Complemental strand, 19438802 - 19438768
Alignment:
Q  82 ataagggcaacctggtgcactaaagctcccgcata 116  Q
    |||||||||||||||||||||| ||||||||||||    
T  19438802 ataagggcaacctggtgcactagagctcccgcata 19438768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 31694109 - 31694207
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 182  Q
    |||||||  ||||||||||||| |||||||||||| |||| ||| ||| | |||||| || |  |||||||||| ||||  ||| ||| ||||||||||    
T  31694109 aagggcagtctggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaataggtgtattgtatgcagctttagcctattttttacac 31694207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 9794390 - 9794471
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 176  Q
    |||||||||||||| | ||||| |   || ||| ||| || |||||| |||| |||||||||| ||||||||||||||||||    
T  9794390 ggtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 24903746 - 24903807
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||| ||||| || ||| ||||||| || ||||||||| |||||||||||| |||||||||    
T  24903746 gggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctgttt 24903807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 25622594 - 25622533
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt 145  Q
    |||||||| | |||||||||||||||||||||||| | || | | ||| |||||||||||||    
T  25622594 aagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 32354261 - 32354228
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatac 117  Q
    |||||||||| |||||||||||||||||||||||    
T  32354261 aagggcaacccggtgcactaaagctcccgcatac 32354228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 20639659 - 20639770
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 182  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  20639659 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacac 20639758  T
Q  183 aagaggctgttt 194  Q
    ||||||||||||    
T  20639759 aagaggctgttt 20639770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 6430625 - 6430762
Alignment:
Q  82 ataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||||| ||||| |||||||||||||||||| | || | | |||  ||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  6430625 ataagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctg-tttttaca 6430723  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  6430724 caagaggctgtttccatgacttgaacccgtgacctttca 6430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 17043398 - 17043531
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 185  Q
    ||||| ||||||||| ||||||||| ||||| | | || ||| ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  17043398 gggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaag 17043496  T
Q  186 aggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||| || || |||||| ||||||||||||    
T  17043497 aggctgtttccaggacttgaacctgtgacctttca 17043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 14983968 - 14983858
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||| |||| |||||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| |||  |||||||| |||||||||||    
T  14983968 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacaca 14983869  T
Q  184 agaggctgttt 194  Q
    |||||||||||    
T  14983868 agaggctgttt 14983858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 25629183 - 25629073
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||||||| ||| || | | ||| |||||||||||||| ||||||||||| ||| |||||||| |||||||||||    
T  25629183 aagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacaca 25629084  T
Q  184 agaggctgttt 194  Q
    |||| ||||||    
T  25629083 agagactgttt 25629073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 5648392 - 5648260
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||||  ||||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  5648392 aagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 5648294  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| || || ||||||  ||||||||    
T  5648293 agaggctgtttccaggacttgaacccgtgacctt 5648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 16408602 - 16408737
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||| ||||||||  | ||||||||||||||||||||||||||||||||||    
T  16408602 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttaca 16408701  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||||| || || ||||||  ||||||||    
T  16408702 caagaggctgtttccaggacttgaacccgtgacctt 16408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 44363131 - 44363269
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||||||||||||   |||  |||||||||| | ||||||||||||||||    
T  44363131 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttaca 44363230  T
Q  182 caagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    || |||||||||| || || ||||||| |||||||||||    
T  44363231 cacgaggctgttttcaggacttgaactcgtgacctttca 44363269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 47444091 - 47443956
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||||  ||||||| ||||||| ||||| | | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||    
T  47444091 aagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgca 47443992  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttc 219  Q
    ||||||||||| || || ||||||  ||||||||||    
T  47443991 agaggctgtttccaggacttgaacccgtgacctttc 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 21647098 - 21646965
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||| |||||||||||||||||||||| |   || ||| ||| |||||||||||||  | || |||||||||||| |||||||| |||||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacaca 21646999  T
Q  184 agaggctgtttacacgatttgaacttgtgacctt 217  Q
    ||||||||||| || || |||||| |||||||||    
T  21646998 agaggctgtttccaggacttgaacctgtgacctt 21646965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 51865050 - 51865152
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||| ||||||||||||||||| | || | | ||| ||| |||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  51865050 ggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T
Q  195 aca 197  Q
    |||    
T  51865150 aca 51865152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 47528531 - 47528665
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| ||||||| ||||   | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  47528531 aagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 47528628  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || |||||| ||||||||||||    
T  47528629 agaggctgtttccaggacttgaacctgtgacctttca 47528665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 48598826 - 48598960
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||| ||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  48598826 aagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 48598923  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  48598924 agaggctgtttccaggacttgaacccgtgacctttca 48598960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 30639513 - 30639378
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||||  ||||||||||||||||||||| | | || | | ||| ||||| |||||||| ||||||||||||||| |||||||||| |||||||||    
T  30639513 aagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 30639415  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||| |||||| || || ||||||  |||||||||||    
T  30639414 agagtctgtttccaggacttgaaccagtgacctttca 30639378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 40915965 - 40915830
Alignment:
Q  81 aataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 180  Q
    ||||||||||| | |||||||| ||||||||||||||| | || | | ||| || ||||||||||| ||||||||||||||| |||||| || |||||||    
T  40915965 aataagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttg-tttttac 40915867  T
Q  181 acaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    |||||||||||||| || || ||||||  ||||||||    
T  40915866 acaagaggctgtttccaggacttgaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 23501923 - 23501813
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||||| | | || | | ||| |||||||||||||  | ||||||||||||||  ||||||||||||||||||    
T  23501923 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttaca 23501824  T
Q  182 caagaggctgt 192  Q
    |||||||||||    
T  23501823 caagaggctgt 23501813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 9832314 - 9832448
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| || ||| ||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  9832314 aagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 9832411  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  9832412 agaggctgttttcaggacttgaacccgtgacctttca 9832448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 11054149 - 11054283
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||| || |||||| |||||||||||||||||||||||||  |||||||||    
T  11054149 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctg--ttttacaca 11054246  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||| |||||| || || ||||||  |||||||||||    
T  11054247 agagactgttttcaggacttgaacccgtgacctttca 11054283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 19027971 - 19027846
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||||| |||||| |  | |||  || ||||||||||| || ||||||||||||||| ||||||||||||||||||||||| | |||||    
T  19027971 ggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgttt 19027872  T
Q  195 acacgatttgaacttgtgacctttca 220  Q
     || || ||||||  |||||||||||    
T  19027871 ccaggacttgaacccgtgacctttca 19027846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 20225116 - 20224982
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  20225116 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 20225019  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||| ||||| || || ||||||   ||||||||||    
T  20225018 agaggttgtttccaggacttgaacccatgacctttca 20224982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 29207900 - 29208033
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    ||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  ||||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaa 29207997  T
Q  185 gaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||  ||| || || ||||||  |||||||||||    
T  29207998 gaggcaatttccaggacttgaacccgtgacctttca 29208033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 35567304 - 35567168
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||| || |||||||||||||||||||| ||| | ||   | ||| |||||||||||||| |||| |||||| ||| ||||||||||||||||||||    
T  35567304 aagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacaca 35567205  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    || |||||||| || || ||||||   ||||||||||    
T  35567204 agtggctgtttccaagacttgaacccatgacctttca 35567168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 179
Target Start/End: Original strand, 30690177 - 30690272
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttta 179  Q
    ||||||| ||||||||||||||||||||||||||| | || | | ||| ||||||||||| || |||||||||| |||| ||||||||||||||||    
T  30690177 aagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgtttttta 30690272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 220
Target Start/End: Complemental strand, 37494972 - 37494849
Alignment:
Q  97 tgcactaaagctcccgcatacgtaagggctgcgaaa-gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 195  Q
    |||||||||||||| |||||||  ||||   ||||| |||||||||||||| || ||||||| |||  ||||||||||||||||||||||||| |||||     
T  37494972 tgcactaaagctcctgcatacg-cagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttc 37494874  T
Q  196 cacgatttgaacttgtgacctttca 220  Q
    || || |||||| ||||||||||||    
T  37494873 caggacttgaacctgtgacctttca 37494849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 5306661 - 5306800
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccg----catacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttta 179  Q
    |||||||||| |||||| |||||||||||    |||||| | || | | ||| |||||||||||||| ||||||||||||||  |||||||||  |||||    
T  5306661 aagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-atttta 5306759  T
Q  180 cacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||| || || ||||||  |||||||||||    
T  5306760 cacaagaggctgtttccaggacttgaacccgtgacctttca 5306800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 12711450 - 12711553
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccct-gttttttacac 182  Q
    |||||||||  |||||||||||| | |||||||||  ||| ||| ||| ||||||| |||||| ||||||||||||||||||||||||  ||||||||||    
T  12711450 aagggcaactgggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttttttacac 12711549  T
Q  183 aaga 186  Q
    ||||    
T  12711550 aaga 12711553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 20405223 - 20405110
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgtt-ttttac 180  Q
    ||||||||||   |||||||||||||||||||| |   || | | ||| |||||||||||||  |||||||||||||||| |||||||||||| ||||||    
T  20405223 aagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttac 20405124  T
Q  181 acaagaggctgttt 194  Q
    ||||||||||||||    
T  20405123 acaagaggctgttt 20405110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 16911698 - 16911586
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||  |||||||||||||| |||| | || | | ||| |||||||||||||  | ||||||||||||||| ||||||||| ||| ||||    
T  16911698 aagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtaca 16911599  T
Q  182 caagaggctgttt 194  Q
    |||||||||||||    
T  16911598 caagaggctgttt 16911586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 7909280 - 7909391
Alignment:
Q  83 taagggcaacctggtgcactaaagctccc-gcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||||||||| | ||||||||||||||| ||||||| | ||   | ||| |||||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  7909280 taagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-tttttaca 7909378  T
Q  182 caagaggctgttt 194  Q
    |||||| ||||||    
T  7909379 caagagactgttt 7909391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 8473620 - 8473744
Alignment:
Q  83 taagggcaacctggtgcactaaagctcccgcatacgtaaggg--ctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 180  Q
    ||||||||||| |||||||||||||||||||||| | | |||  | | ||| |||||||||||||| |||||||||| |||| |||||||||  ||  ||    
T  8473620 taagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctg--ttaaac 8473717  T
Q  181 acaagaggctgtttacacgatttgaac 207  Q
    |||||||||||||| || || ||||||    
T  8473718 acaagaggctgtttccaggacttgaac 8473744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 21489223 - 21489111
Alignment:
Q  83 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||| ||||||  |||||| |||||||||||||||| | ||   | ||| |||||||||||||| | || ||||||||||||||||| |||||||||||     
T  21489223 taagagcaacccagtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacg 21489124  T
Q  182 caagaggctgttt 194  Q
    |||||||||||||    
T  21489123 caagaggctgttt 21489111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 25463247 - 25463120
Alignment:
Q  92 cctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 191  Q
    |||||||||| |||||||||||||| | | || | | ||| |||||||||||||| |||| |||||||||  ||| ||| ||||||||||||||||| ||    
T  25463247 cctggtgcac-aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttg 25463149  T
Q  192 tttacacgatttgaacttgtgacctttca 220  Q
    ||| || || ||||||  |||||||||||    
T  25463148 tttccaggacttgaacccgtgacctttca 25463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 54175199 - 54175088
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttag-tgtattgtacgcagtcttaccctgttttttaca 181  Q
    ||||||| || |||||||||||||||||||||| | | || | | | ||||| ||||||||||| | |||||||||||||| |||||||||| |||||||    
T  54175199 aagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgt-ttttaca 54175101  T
Q  182 caagaggctgttt 194  Q
    |||||||||||||    
T  54175100 caagaggctgttt 54175088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 9987846 - 9987945
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||| ||||||||||||||| | |||| |   ||| |||||||||||||| |||||||||| |||| |||||||| || ||||||||||||| |||||    
T  9987846 ggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgttt 9987945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 55766467 - 55766558
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttt 175  Q
    ||||||| || ||||||||||||||| |||||||| |||| | | ||  |||| |||||||| |||||||||||||||| ||||||||||||    
T  55766467 aagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgttt 55766558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 55830722 - 55830813
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttt 175  Q
    ||||||| |||||||||||||||||| |||||||| |||| | | ||  |||| |||||||| ||||||||||||||||  |||||||||||    
T  55830722 aagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctgttt 55830813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 13256400 - 13256508
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 181  Q
    |||||||||| |||||||||||||||||||| | |   ||   | ||| ||||||||| |||  | ||||||||||||||| ||||||||||||||||||    
T  13256400 aagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttaca 13256499  T
Q  182 caagaggct 190  Q
    |||||||||    
T  13256500 caagaggct 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 17079697 - 17079754
Alignment:
Q  129 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 186  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||    
T  17079697 gaaagggtcccaccatttagcgtattgtatgcagccttaccctgttttatacacaaga 17079754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 39029111 - 39029172
Alignment:
Q  134 ggtcccaccattta-gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39029111 ggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgttt 39029172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 7038122 - 7038051
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||| ||||||||||| |||||||||||||| ||||||| || || |||||| ||||||||||||    
T  7038122 gtgtattgtacgaagtcttaccctattttttacacaagaagctgttt-caggacttgaacctgtgacctttca 7038051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 41018807 - 41018930
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 195  Q
    |||||||||||| ||  |||||| |||| ||| ||| ||||||||| |||| |||||||||||| || ||||||||   |||||||||||||| |||||     
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccct-aattttacacaagaggttgtttc 41018905  T
Q  196 cacgatttgaacttgtgacctttca 220  Q
    || || ||||||  |||||||||||    
T  41018906 caggacttgaacccgtgacctttca 41018930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 7385522 - 7385613
Alignment:
Q  129 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||||||||||| |||||||| || ||  |||||||| ||||||||||| |||||||||| || |  ||||||  |||||||||||    
T  7385522 gaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttca 7385613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 49796911 - 49796822
Alignment:
Q  104 aagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||| | ||   | ||| |||||||||||||| ||||||||||||||| |||||| || |||| ||||||||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatg-ttttaacacaagaggctgttt 49796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 54967151 - 54967019
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 185  Q
    ||||| || ||||||| |||||||||||||| ||| ||   | ||| |||||||||||||| || ||||||| |||  ||||||||||||||||||||||    
T  54967151 gggcagcccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaag 54967054  T
Q  186 aggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||| | ||| ||  | |||||| ||||||||||||    
T  54967053 aggttctttccagaacttgaacatgtgacctttca 54967019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 487187 - 487272
Alignment:
Q  136 tcccaccattt-agtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| ||||||||||||||||  ||||| |||||| ||||||||||| ||||| || || ||||||  |||||||||||    
T  487187 tcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttca 487272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 20225210 - 20225119
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctgt 173  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| ||||||||||||  || ||||||||||||||| ||||||||||    
T  20225210 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 179
Target Start/End: Original strand, 20908637 - 20908733
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgtttttta 179  Q
    ||||||| ||| ||||||||||||||||||||||| | ||   | ||| ||||||||||| ||| ||||||||||||||| |||||| | |||||||    
T  20908637 aagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttttta 20908733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 25343257 - 25343189
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 216  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||| ||  | |||||| ||||||||    
T  25343257 gtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacct 25343189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 48327814 - 48327869
Alignment:
Q  134 ggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagag 187  Q
    ||||||||||||  | |||||||||| |||||||||||||||||||||||||||||    
T  48327814 ggtcccaccattattggtgtattgtatgcagtcttaccctgttttttacacaagag 48327869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 39077800 - 39077931
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagg-gtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 185  Q
    ||||||| ||||||||| |||||||||||| | | || | | |||||  ||| |||||||| || |||||||||||  |||||||||||||  |||||||    
T  39077800 ggcaacccggtgcactagagctcccgcatatgcagggtccg-gaaagatgtctcaccatttggtatattgtacgcaaccttaccctgtttt--acacaag 39077896  T
Q  186 aggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||| || || ||||||  |||||||||||    
T  39077897 aggctgtttccaggacttgaacccgtgacctttca 39077931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 47441580 - 47441667
Alignment:
Q  133 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||| ||||||| ||||||||||| ||| ||||||||| |||||||| ||||| ||||||    || |||||| ||||||||||||    
T  47441580 gggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttca 47441667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 49938611 - 49938727
Alignment:
Q  101 ctaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacg 199  Q
    |||||||||||||||| | | ||  || ||| |||||||||||||| | |||||||||| |   ||||||| ||||| ||||||||||||||||| || |    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtacac---cttaccccgtttt-tacacaagaggctgtttccagg 49938706  T
Q  200 atttgaacttgtgacctttca 220  Q
    | |||||| ||||||||||||    
T  49938707 acttgaacctgtgacctttca 49938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 14590922 - 14590861
Alignment:
Q  134 ggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacacaagaggctgttt 194  Q
    |||||||||||||  ||||||||| |||| ||||||||||| ||||| ||||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgttt 14590861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 30352581 - 30352661
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcag 162  Q
    |||||||||  |||||||||||||||||||||||| | || | | ||| |||||||||||  ||| |||||||||||||||    
T  30352581 aagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcag 30352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 38755909 - 38755970
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt 145  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||    
T  38755909 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 30581515 - 30581591
Alignment:
Q  133 gggtcccaccatttag-tgtattgtacgcagtcttaccctgtttt-ttacacaagaggctgtttacacgatttgaac 207  Q
    |||||||||||||| | |||||||||| ||  ||||||||||||| |||||||||||| ||||| ||||| ||||||    
T  30581515 gggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaac 30581591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 35532135 - 35532092
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacg 118  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  35532135 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatacg 35532092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 2813262 - 2813169
Alignment:
Q  84 aagggcaacctggtgcact-aaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgtt 174  Q
    |||||||| | |||||||| |||||||||||||||| |  |   | |||||||||||||||||  |  ||||||||||||||||||||||||||    
T  2813262 aagggcaatccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcagtcttaccctgtt 2813169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 11394986 - 11394952
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  11394986 aagggcaacccggtgcactaaagctcccgcatacg 11394952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 11404713 - 11404679
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  11404713 aagggcaacccggtgcactaaagctcccgcatacg 11404679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 23580281 - 23580315
Alignment:
Q  156 tacgcagtcttaccctgttttttacacaagaggct 190  Q
    ||||||||||| |||||||||||||||||||||||    
T  23580281 tacgcagtcttcccctgttttttacacaagaggct 23580315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 30496374 - 30496457
Alignment:
Q  135 gtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||| |||||| |||||||||| |||| |||||||   | ||||||||||||||||||| || || ||||||  |||||||||||    
T  30496374 gtccccccatttggtgtattgtatgcagccttacccg--tgtttacacaagaggctgtttccatgacttgaacacgtgacctttca 30496457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 38786743 - 38786673
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtatt 154  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| |||||||    
T  38786743 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 40553938 - 40553972
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacg 118  Q
    |||||||||| ||||||||||||||||||||||||    
T  40553938 aagggcaacccggtgcactaaagctcccgcatacg 40553972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 51420644 - 51420598
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  51420644 gtgtattgtacccagccttaccctgttttctacacaagaggttgttt 51420598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 33836488 - 33836549
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt 145  Q
    |||||||||| | |||||||||||||||||||||| | || | | ||| |||||||||||||    
T  33836488 aagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 10277758 - 10277879
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||| | ||| ||||| | |||||||||| | | || ||| ||| ||||  |||||||| ||||||||||||||| |||| ||  | ||||| |||    
T  10277758 aagggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcc--tattttataca 10277855  T
Q  184 agaggctgtttacacgatttgaac 207  Q
    |||||||||||  | |||||||||    
T  10277856 agaggctgtttcaaggatttgaac 10277879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 16494338 - 16494259
Alignment:
Q  99 cactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgtttt 176  Q
    |||||||||| ||||||||  | || ||| |||||||||||||||  ||| |||||||||| ||||  ||||||||||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttt 16494259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 216
Target Start/End: Original strand, 32478793 - 32478918
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||| ||| ||||||| ||||||||||||||||   || | | ||| |||||||||||||| |||||||     ||| ||||||||| |||||||||     
T  32478793 aagggccacccggtgcac-aaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctg-tttttacact 32478885  T
Q  184 agaggctgtttacacgatttgaacttgtgacct 216  Q
    ||||| ||||| || || |||||| ||||||||    
T  32478886 agaggttgtttccaggacttgaacctgtgacct 32478918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 32484367 - 32484335
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcata 116  Q
    |||||||||| ||||||||||||||||||||||    
T  32484367 aagggcaacccggtgcactaaagctcccgcata 32484335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 35894511 - 35894563
Alignment:
Q  133 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    |||||||||||||| | |||||||||||||  |||||| ||||||||||||||    
T  35894511 gggtcccaccattttggtgtattgtacgcacacttaccgtgttttttacacaa 35894563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 44718701 - 44718641
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat 144  Q
    |||||||||| ||||  |||||||||||||||||| | || ||| ||| ||||||||||||    
T  44718701 aagggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 56323034 - 56323002
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcata 116  Q
    |||||||||| ||||||||||||||||||||||    
T  56323034 aagggcaacccggtgcactaaagctcccgcata 56323002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 24764 - 24882
Alignment:
Q  75 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 174  Q
    ||||| || |||||||||| | |||||||||||||||||||||| | ||   | ||| |||||||||||||| |||| |||||||||| |||||||||||    
T  24764 aaaaaaaaaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgtt 24863  T
Q  175 ttttacacaagaggctgtt 193  Q
    |||||||||||||||||||    
T  24864 ttttacacaagaggctgtt 24882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 46965 - 46855
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||  |||||||| |||||||||||    
T  46965 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacaca 46866  T
Q  184 agaggctgttt 194  Q
    ||||| |||||    
T  46865 agaggttgttt 46855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 43780 - 43683
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    |||||||| |||||||||||| | | || | | ||||||| ||||||||||| ||||||||||||||| |||||| ||  |||||||||||| |||||||    
T  43780 gtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttg--ttttacacaagacgctgttt 43683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 46710 - 46770
Alignment:
Q  86 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt 146  Q
    ||||| |||| |||| ||||||||||||||||| | || ||| ||| ||||||||||||||    
T  46710 gggcagcctgatgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 46770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 13025 - 13160
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||||||| |||||||||| | || ||| ||| |||||||||||||  ||||||||||||||| |||||| || ||||||| ||    
T  13025 aagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttg-tttttacgca 13123  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  13124 agaggctgtttccaggacttgaaccggtgacctttca 13160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 30711 - 30577
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| | |||||||  |||||||||    
T  30711 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctg--ttttacaca 30614  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  30613 agaggctgtttccaggacttgaaccggtgacctttca 30577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 207
Target Start/End: Original strand, 48635 - 48756
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  48635 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 48732  T
Q  184 agaggctgtttacacgatttgaac 207  Q
    ||||||||||| ||| | ||||||    
T  48733 agaggctgtttccaccacttgaac 48756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 10932 - 10834
Alignment:
Q  96 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 194  Q
    ||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||||| |||||| | ||||||||||||||||||||||| |||||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttt 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 72868 - 72971
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    ||||||||||||||||||||||||||||||||||| | |  | | ||| |||| | ||||||| |||||||||| |||| |||||| |||||||||||||    
T  72868 aagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacaca 72967  T
Q  184 agag 187  Q
    ||||    
T  72968 agag 72971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 11263 - 11129
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 183  Q
    |||||||||||||||||||| |||||||||||| | | || | | ||| | |||||||||||| |||||||||| |||| ||||  || | |||||||||    
T  11263 aagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagcctta--ctttgttttacaca 11166  T
Q  184 agaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||| || || ||||||  |||||||||||    
T  11165 agaggctgtttccaggacttgaacccgtgacctttca 11129  T

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Target: scaffold0187 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 10052 - 10185
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    ||||||||| ||||||||  |||||| ||||| | | || | | ||| ||||||||| |||| ||||||||||||||||||||| |||  ||||||||||    
T  10052 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg--ttttacacaa 10149  T
Q  185 gaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| || || ||||||  |||||||||||    
T  10150 gaggctgtttccaggacttgaacccgtgacctttca 10185  T

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Target: scaffold0187; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 20380 - 20513
Alignment:
Q  85 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 184  Q
    ||||||||| ||||||||  |||||| ||||| | | || | | ||| ||||||||| |||| ||||||||||||||||||||| |||  ||||||||||    
T  20380 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg--ttttacacaa 20477  T
Q  185 gaggctgtttacacgatttgaacttgtgacctttca 220  Q
    |||||||||| || || ||||||  |||||||||||    
T  20478 gaggctgtttccaggacttgaacccgtgacctttca 20513  T

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Target: scaffold1176 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 1591 - 1722
Alignment:
Q  87 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 186  Q
    ||||||||||||||||||||||||||||||||   || | | ||| |||||||| ||||| |||||||||| |||| |||| ||||  ||||||||||||    
T  1591 ggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctg--ttttacacaaga 1688  T
Q  187 ggctgtttacacgatttgaacttgtgacctttca 220  Q
    || ||||| || || ||||||   ||||||||||    
T  1689 ggttgttttcaggacttgaacccatgacctttca 1722  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 35063 - 35152
Alignment:
Q  129 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt-ttacacaagaggctgtttacacgatttgaacttgtgacctt 217  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||   ||||||||| |||||| || || ||||||  ||||||||    
T  35063 gaaagggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgacctt 35152  T

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Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 23714 - 23610
Alignment:
Q  103 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatt 202  Q
    ||||||||| |||||  |||| ||| ||| ||||||||||||||  |  ||||||||||| || |||||||||||||||||||||| ||||| || || |    
T  23714 aaagctcccacatactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagact 23615  T
Q  203 tgaac 207  Q
    |||||    
T  23614 tgaac 23610  T

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Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 24134 - 24220
Alignment:
Q  84 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccc 170  Q
    |||||||| | ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||    
T  24134 aagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 33021 - 32960
Alignment:
Q  128 cgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagagg 188  Q
    |||||||||||||||| ||| ||||||||||  ||||||||| |||||||||||| ||||||    
T  33021 cgaaagggtcccaccaatttggtgtattgtatacagtcttactctgttttttacagaagagg 32960  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 226456 - 226517
Alignment:
Q  134 ggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgttt 194  Q
    |||||||||||||  ||||||||| |||| ||||||||| ||||||| ||||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgttt 226517  T

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Target: scaffold0254 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 4227 - 4155
Alignment:
Q  148 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 220  Q
    ||||||||||||||  |||| ||||| |||||||||||||| ||||| || || ||||||  |||||||||||    
T  4227 gtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttca 4155  T

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Target: scaffold0954 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 3667 - 3572
Alignment:
Q  95 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 190  Q
    |||||||||||||| ||||||||| | ||   | ||| |||||||| ||||  ||||||| ||||||| |||||| | | ||||||||||||||||    
T  3667 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggct 3572  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 24792 - 24696
Alignment:
Q  74 taaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccc 170  Q
    |||||| || |||||||| | |||||||| ||||||||| ||||| | || |||  || |||  |||| |||| ||||||| |||||||||||||||    
T  24792 taaaaaaaaaaagggcaatcaggtgcactgaagctcccgtatacgcagggtctggaaagggggtccactatttggtgtattatacgcagtcttaccc 24696  T

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