View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13688_high_10 (Length: 310)

Name: NF13688_high_10
Description: NF13688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13688_high_10
NF13688_high_10
[»] chr8 (14 HSPs)
chr8 (6-152)||(38613611-38613757)
chr8 (149-279)||(6311097-6311229)
chr8 (169-279)||(7290080-7290192)
chr8 (152-277)||(36979184-36979308)
chr8 (152-277)||(4760242-4760366)
chr8 (152-258)||(18853356-18853457)
chr8 (152-271)||(18870734-18870849)
chr8 (173-256)||(25328456-25328540)
chr8 (173-256)||(39785002-39785086)
chr8 (152-277)||(30655448-30655572)
chr8 (143-249)||(10689339-10689442)
chr8 (188-277)||(33037972-33038063)
chr8 (173-256)||(35745213-35745298)
chr8 (173-247)||(10684452-10684528)
[»] chr5 (20 HSPs)
chr5 (169-279)||(1457315-1457427)
chr5 (169-279)||(30631227-30631338)
chr5 (169-279)||(27444789-27444901)
chr5 (173-279)||(43592102-43592210)
chr5 (173-279)||(43598547-43598655)
chr5 (173-279)||(43604039-43604147)
chr5 (173-279)||(43609531-43609639)
chr5 (169-279)||(27449633-27449745)
chr5 (173-256)||(28807753-28807837)
chr5 (173-279)||(15044512-15044618)
chr5 (173-256)||(37556802-37556887)
chr5 (173-256)||(37561624-37561709)
chr5 (152-217)||(31180079-31180142)
chr5 (173-256)||(2785197-2785282)
chr5 (173-256)||(31397171-31397256)
chr5 (173-256)||(31402028-31402113)
chr5 (191-256)||(33791158-33791223)
chr5 (152-277)||(38191983-38192105)
chr5 (152-277)||(38219208-38219330)
chr5 (191-256)||(33768021-33768086)
[»] chr4 (11 HSPs)
chr4 (169-279)||(51520276-51520388)
chr4 (173-279)||(9224560-9224668)
chr4 (173-279)||(9229347-9229455)
chr4 (173-279)||(56146865-56146973)
chr4 (173-256)||(45347996-45348079)
chr4 (173-256)||(45357475-45357558)
chr4 (173-278)||(3813846-3813954)
chr4 (173-256)||(18855549-18855633)
chr4 (152-277)||(24741748-24741871)
chr4 (173-256)||(5732486-5732568)
chr4 (152-277)||(29760449-29760572)
[»] scaffold0135 (1 HSPs)
scaffold0135 (173-279)||(35215-35323)
[»] chr7 (14 HSPs)
chr7 (173-279)||(12396735-12396843)
chr7 (173-279)||(12406155-12406263)
chr7 (173-256)||(24024506-24024589)
chr7 (173-279)||(4866553-4866661)
chr7 (150-256)||(2057763-2057866)
chr7 (173-256)||(31109761-31109844)
chr7 (152-277)||(20357713-20357837)
chr7 (173-256)||(21812417-21812501)
chr7 (173-256)||(19992135-19992219)
chr7 (152-277)||(1533608-1533730)
chr7 (173-247)||(16879894-16879970)
chr7 (173-247)||(16884750-16884826)
chr7 (173-247)||(24261511-24261587)
chr7 (173-247)||(24266390-24266466)
[»] chr6 (14 HSPs)
chr6 (173-279)||(11856795-11856903)
chr6 (173-279)||(14737730-14737838)
chr6 (173-279)||(14742589-14742697)
chr6 (173-256)||(22010875-22010958)
chr6 (173-256)||(6438324-6438407)
chr6 (173-279)||(28184325-28184436)
chr6 (173-256)||(28155749-28155832)
chr6 (152-277)||(30125960-30126084)
chr6 (152-277)||(5674934-5675057)
chr6 (173-256)||(6005239-6005324)
chr6 (191-256)||(5343322-5343387)
chr6 (191-256)||(33330625-33330690)
chr6 (173-256)||(33336122-33336207)
chr6 (173-256)||(16838566-16838651)
[»] chr3 (14 HSPs)
chr3 (173-279)||(22173348-22173456)
chr3 (150-277)||(7167049-7167174)
chr3 (173-256)||(18656256-18656338)
chr3 (152-256)||(2671776-2671876)
chr3 (173-256)||(8512037-8512122)
chr3 (173-256)||(8516917-8517002)
chr3 (170-279)||(28504020-28504127)
chr3 (152-255)||(40372986-40373085)
chr3 (152-256)||(8739254-8739354)
chr3 (152-256)||(9091492-9091592)
chr3 (173-256)||(2677266-2677351)
chr3 (173-256)||(2673110-2673195)
chr3 (169-277)||(8477189-8477295)
chr3 (173-256)||(10207755-10207840)
[»] chr2 (9 HSPs)
chr2 (173-256)||(44312802-44312885)
chr2 (173-279)||(32246607-32246716)
chr2 (150-277)||(11099093-11099219)
chr2 (173-256)||(39812166-39812250)
chr2 (173-256)||(19344243-19344327)
chr2 (173-256)||(19349101-19349185)
chr2 (152-256)||(9296591-9296691)
chr2 (152-256)||(14291295-14291395)
chr2 (152-277)||(25403443-25403565)
[»] chr1 (8 HSPs)
chr1 (173-256)||(25445268-25445352)
chr1 (173-256)||(39445322-39445406)
chr1 (173-256)||(44024051-44024135)
chr1 (173-251)||(41386571-41386650)
chr1 (173-256)||(41398060-41398144)
chr1 (173-256)||(1055190-1055274)
chr1 (191-256)||(43988644-43988709)
chr1 (188-249)||(24787564-24787624)
[»] scaffold0127 (1 HSPs)
scaffold0127 (173-251)||(34132-34211)
[»] scaffold0464 (1 HSPs)
scaffold0464 (173-256)||(185-269)
[»] scaffold0355 (2 HSPs)
scaffold0355 (173-256)||(9818-9902)
scaffold0355 (173-256)||(65-143)
[»] scaffold0978 (1 HSPs)
scaffold0978 (169-249)||(433-510)
[»] scaffold0479 (1 HSPs)
scaffold0479 (173-234)||(13171-13233)
[»] scaffold0197 (2 HSPs)
scaffold0197 (173-256)||(19343-19428)
scaffold0197 (173-247)||(14497-14573)
[»] scaffold0028 (1 HSPs)
scaffold0028 (173-256)||(149134-149219)
[»] scaffold0259 (1 HSPs)
scaffold0259 (173-256)||(2429-2514)
[»] scaffold0009 (1 HSPs)
scaffold0009 (173-247)||(182152-182228)


Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 152
Target Start/End: Original strand, 38613611 - 38613757
Alignment:
Q  6 catcatcatcatctctggtcccaggtttcaaaattatgagtaattttaaacttgatactcattgtaatctccgttttcacctgcagggtcttaaatacat 105  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38613611 catcatcatcttctctggtcccagctttcaaaattatgagtaattttaaacttgatactcattgtaatctccgttttcacctgcagggtcttaaatacat 38613710  T
Q  106 tgcacaaacaccgttgccaaggtttgaatctgctgaattttgcttct 152  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||    
T  38613711 tgcacaaacaccgttgccaaggtttgaatcagctcgattttgcttct 38613757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 149 - 279
Target Start/End: Original strand, 6311097 - 6311229
Alignment:
Q  149 ttctgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca 248  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6311097 ttctgttgtgaatccggttgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtttccaagca 6311196  T
Q  249 aacaaca--aaactagccctagactagtgtata 279  Q
    |||||||  |||  |||||||||||||||||||    
T  6311197 aacaacaacaaagcagccctagactagtgtata 6311229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 7290192 - 7290080
Alignment:
Q  169 aaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccct 266  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||  |||  ||||||    
T  7290192 aaactcacaccaatgaaataaacattgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaaacaaacaacaacaaagcagccct 7290093  T
Q  267 agactagtgtata 279  Q
    |||||||||||||    
T  7290092 agactagtgtata 7290080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 36979184 - 36979308
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| ||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||| |||| |  ||||||||||||||||  |    
T  36979184 tgttgtgaatccggttgaaactcacaccaatgaaa--aacaaagatgtgtggagcaagagatagtggtaatcaatga-acaaaatggtttccaagcaaca 36979280  T
Q  250 acaacaaaactagccctagactagtgta 277  Q
    |||||||||  |||||||||||||||||    
T  36979281 acaacaaaaacagccctagactagtgta 36979308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 4760366 - 4760242
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| ||||||||||| ||||||||  ||||| |||||||||||| || ||||||||||||| ||||| | ||||||||||||||||  |    
T  4760366 tgttgtgaatccggttgaaactcacatcaatgaaa--aacaaagatgtgtggagctagagatagtggtaatcaatgagca-aaatggtttccaagcaaca 4760270  T
Q  250 acaacaaaactagccctagactagtgta 277  Q
    |||||||||  |||||||||||||||||    
T  4760269 acaacaaaaacagccctagactagtgta 4760242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 258
Target Start/End: Complemental strand, 18853457 - 18853356
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    |||||||| ||||| ||||||||||||||| |||| |||    ||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||    
T  18853457 tgttgtgaatccggttgaaactcacaccaacgaaacaaa----gatgtgtggagcaagagatagtggtaatctatgag-tcaaatggtttccaagcaaac 18853363  T
Q  252 aacaaaa 258  Q
    |||||||    
T  18853362 aacaaaa 18853356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 271
Target Start/End: Complemental strand, 18870849 - 18870734
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    |||||||| ||||| ||||||||||||||||||||   |||| ||||||||||||||| |||| |||||||| |||||   |||||||||||||||||||    
T  18870849 tgttgtgaatccggttgaaactcacaccaatgaaa---acaaagatgtgtggagcaagagataatggtaatctatgagtt-aaatggtttccaagcaaac 18870754  T
Q  252 aacaaaactagccctagact 271  Q
    |||||||   ||||||||||    
T  18870753 aacaaaaaacgccctagact 18870734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 25328540 - 25328456
Alignment:
Q  173 tcacaccaatgaaataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||    
T  25328540 tcacaacaatgaaataaatcaatgatgtgcggagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaacaacaa 25328456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 39785086 - 39785002
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||| || |||||    
T  39785086 tcacaccaatgaaataaaccaaagatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaataacaa 39785002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 30655448 - 30655572
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| ||||||||||||||||||||   |||| ||||||||||||||| ||||||||||||| |||| |  ||||||||||||||||  |    
T  30655448 tgttgtgaatccggttgaaactcacaccaatgaaa---acaaagatgtgtggagcaagagatagtggtaatcaatga-acaaaatggtttccaagcaaca 30655543  T
Q  250 acaac-aaaactagccctagactagtgta 277  Q
    ||||| ||||  |||||||||||||||||    
T  30655544 acaacaaaaaacagccctagactagtgta 30655572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 10689442 - 10689339
Alignment:
Q  143 ttttgcttctgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttc 242  Q
    ||||| || ||||||| || ||| ||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||| |||||  | |||||||||    
T  10689442 ttttgattgtgttgtgttttcggttgaaactcacaccaatgaaa--aacaaagatgtgtggagcaagagatagtggtaatctatgag-tctaatggtttc 10689346  T
Q  243 caagcaa 249  Q
    |||||||    
T  10689345 caagcaa 10689339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 33038063 - 33037972
Alignment:
Q  188 aaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--aacaacaa-aactagccctagactagtgta 277  Q
    |||||| ||||||||||||||| ||||||||||||| |||| |  ||||||||||||||||  |||||||| ||  |||||||||||||||||    
T  33038063 aaacaaagatgtgtggagcaagagatagtggtaatcaatga-acaaaatggtttccaagcaacaacaacaataaacagccctagactagtgta 33037972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 35745213 - 35745298
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  35745213 tcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 35745298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 10684528 - 10684452
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagc 247  Q
    |||||||||||| |||||| ||| ||||||||||||||| ||||| ||||||| |||||  |||||||  |||||||    
T  10684528 tcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagc 10684452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 1457427 - 1457315
Alignment:
Q  169 aaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccct 266  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||    
T  1457427 aaactcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccct 1457328  T
Q  267 agactagtgtata 279  Q
    |||||||||||||    
T  1457327 agactagtgtata 1457315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 30631227 - 30631338
Alignment:
Q  169 aaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--aacaacaaaactagccct 266  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||  ||||||||||| ||||||    
T  30631227 aaactcacacaaatgaaataaacaatgatgtgtggagcaagagatagtggtaatctatgagaacaaatggttttcaagcaacaacaacaaaac-agccct 30631325  T
Q  267 agactagtgtata 279  Q
    |||||||||||||    
T  30631326 agactagtgtata 30631338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 27444789 - 27444901
Alignment:
Q  169 aaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccct 266  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||||  | |  ||||||    
T  27444789 aaactcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagtacaaatggtctccaagcaaacaacaacatagcagccct 27444888  T
Q  267 agactagtgtata 279  Q
    |||||||||||||    
T  27444889 agactagtgtata 27444901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 43592102 - 43592210
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  43592102 tcacatcaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctagac 43592201  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  43592202 tagtgtata 43592210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 43598547 - 43598655
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||  |||  ||||||||||    
T  43598547 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctagac 43598646  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  43598647 tagtgtata 43598655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 43604039 - 43604147
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||  |||  ||||||||||    
T  43604039 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctagac 43604138  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  43604139 tagtgtata 43604147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 43609531 - 43609639
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||  |||  ||||||||||    
T  43609531 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctagac 43609630  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  43609631 tagtgtata 43609639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 27449633 - 27449745
Alignment:
Q  169 aaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccct 266  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||||  | |  ||||||    
T  27449633 aaactcacaccaatgaaataaacaatgatatgtggagcaagagatagtggtaatcaatgagtacaaatggtctccaagcaaacaacaacatagcagccct 27449732  T
Q  267 agactagtgtata 279  Q
    |||||||||||||    
T  27449733 agactagtgtata 27449745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 28807837 - 28807753
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  28807837 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaa 28807753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 15044512 - 15044618
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||  |||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||| | |||||||  |||  ||||||||||    
T  15044512 tcacaccaatgaaata--caatgacgtgtagagcaagtgatagtggtaatcaatgagaacaaatggtctccaaaccaacaacaacaaaacagccctagac 15044609  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  15044610 tagtgtata 15044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 37556887 - 37556802
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| || ||||||||||||||||||||||| ||||| |||||| |||||||  ||||||| ||||||||    
T  37556887 tcacaccaatgataataaaccaaagatgtgtggagcaagtgatagtgataatctatgagagcaaatggcctccaagctaacaacaa 37556802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 37561709 - 37561624
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| || ||||||||||||||||||||||| ||||| |||||| |||||||  ||||||| ||||||||    
T  37561709 tcacaccaatgataataaaccaaagatgtgtggagcaagtgatagtgataatctatgagagcaaatggcctccaagctaacaacaa 37561624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 31180079 - 31180142
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtg 217  Q
    |||||||| ||||| |||||||||||||||||||   ||||||||||||||||||||| |||||||    
T  31180079 tgttgtgaatccggttgaaactcacaccaatgaa--taacaatgatgtgtggagcaagagatagtg 31180142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 2785197 - 2785282
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  2785197 tcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 2785282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 31397256 - 31397171
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  31397256 tcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 31397171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 31402113 - 31402028
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  31402113 tcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 31402028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 33791158 - 33791223
Alignment:
Q  191 caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  33791158 caatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 33791223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 38191983 - 38192105
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| |||||||||||||||||   ||||||| ||||||||||||||  |  |||||||||| ||| |   |||  || ||||||||  |    
T  38191983 tgttgtgaatccggttgaaactcacaccaatg---taaacaaagatgtgtggagcaaaaggaagtggtaatctatgtg--taaagtgtctccaagcaaca 38192077  T
Q  250 acaacaaaactagccctagactagtgta 277  Q
    |||||||||  |||||||||||||||||    
T  38192078 acaacaaaaacagccctagactagtgta 38192105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 38219208 - 38219330
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| |||||||||||||||||   ||||||| ||||||||||||||  |  |||||||||| ||| |   |||  || ||||||||  |    
T  38219208 tgttgtgaatccggttgaaactcacaccaatg---taaacaaagatgtgtggagcaaaaggaagtggtaatctatgtg--taaagtgtctccaagcaaca 38219302  T
Q  250 acaacaaaactagccctagactagtgta 277  Q
    |||||||||  |||||||||||||||||    
T  38219303 acaacaaaaacagccctagactagtgta 38219330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 33768021 - 33768086
Alignment:
Q  191 caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||| | ||||| |||||  ||||||   ||||||| ||||||||    
T  33768021 caatgatgtgtggagcaagtgatagagataatctatgagtgcaaatgacctccaagctaacaacaa 33768086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 51520276 - 51520388
Alignment:
Q  169 aaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccct 266  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||    
T  51520276 aaactcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccct 51520375  T
Q  267 agactagtgtata 279  Q
    |||||||||||||    
T  51520376 agactagtgtata 51520388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 9224668 - 9224560
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  9224668 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagac 9224569  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  9224568 tagtgtata 9224560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 9229455 - 9229347
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  9229455 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagac 9229356  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  9229355 tagtgtata 9229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 56146973 - 56146865
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||  |||  ||||||||||    
T  56146973 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaattggtctccaagcaaacaacaacaaagcagccctagac 56146874  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  56146873 tagtgtata 56146865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 45348079 - 45347996
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||    
T  45348079 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatctatgagaacaaatggtcttcaagctaacaacaa 45347996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 45357558 - 45357475
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||    
T  45357558 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatctatgagaacaaatggtcttcaagctaacaacaa 45357475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 278
Target Start/End: Original strand, 3813846 - 3813954
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctaga 269  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||  |||  || ||||||    
T  3813846 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtggtaatcaatgagagcaaatggtctccaagcaaacaacaacaaaacagtcctaga 3813945  T
Q  270 ctagtgtat 278  Q
    |||||||||    
T  3813946 ctagtgtat 3813954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 18855549 - 18855633
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  18855549 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaa 18855633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 24741748 - 24741871
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| ||||||||||||||||||||   |||| ||||||||||||||| ||||||||||||| |||| |  ||||||||||||||||  |    
T  24741748 tgttgtgaatccggttgaaactcacaccaatgaaa---acaaagatgtgtggagcaagagatagtggtaatcaatga-acaaaatggtttccaagcaaca 24741843  T
Q  250 acaacaaaactagccctagactagtgta 277  Q
    |||||||||  |||||||||||||||||    
T  24741844 acaacaaaaacagccctagactagtgta 24741871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 5732486 - 5732568
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||    
T  5732486 tcacaccaatgaaa-atacaatgatgtgtggagcaagtgatggtggtaatcaatgagaacaaatggtctccaagctaacaacaa 5732568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 29760449 - 29760572
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| ||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||| || | |  ||||||||||||||||  |    
T  29760449 tgttgtgaatccggttgaaactcacaccaatgaaa--aacaaagatgtgtggagcaagagatagtggtaatcaat-aaacaaaatggtttccaagcaaca 29760545  T
Q  250 acaacaaaactagccctagactagtgta 277  Q
    |||||||||| | |||||||||||||||    
T  29760546 acaacaaaac-aaccctagactagtgta 29760572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 35323 - 35215
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  35323 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagac 35224  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  35223 tagtgtata 35215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 12396735 - 12396843
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  12396735 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctagac 12396834  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  12396835 tagtgtata 12396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 12406155 - 12406263
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  12406155 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaagcagccctagac 12406254  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  12406255 tagtgtata 12406263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 24024589 - 24024506
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  24024589 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaa 24024506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 4866553 - 4866661
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||||  |||  || |||||||    
T  4866553 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgaggacaaatggtctccaagcaaacaacaacaaaacagtcctagac 4866652  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  4866653 tagtgtata 4866661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 2057763 - 2057866
Alignment:
Q  150 tctgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaa 249  Q
    |||||||||| ||||| ||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||    
T  2057763 tctgttgtgaatccggttgaaactcacaccaatgaaa--aacaaagatgtgtggagcaagagatagtggtaatctatgag-tcaaatggtttccaagcaa 2057859  T
Q  250 acaacaa 256  Q
    |||||||    
T  2057860 acaacaa 2057866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 31109844 - 31109761
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||    
T  31109844 tcacaccaatgaaataaacaatgatgtgtgcagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaacaacaa 31109761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 20357837 - 20357713
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagc---a 248  Q
    |||||||| ||||| ||||||||||||||||||||   |||| ||||||||||||||| ||||||||||||| |||||  |||||||| |||||||        
T  20357837 tgttgtgaatccggttgaaactcacaccaatgaaa---acaaagatgtgtggagcaagagatagtggtaatctatgag-ccaaatggtctccaagctaac 20357742  T
Q  249 aacaacaaaactagccctagactagtgta 277  Q
    ||||||||||  |||||||||||||||||    
T  20357741 aacaacaaaaacagccctagactagtgta 20357713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 21812501 - 21812417
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||| ||||||| |||||||| ||||||||    
T  21812501 tcacaccaatgaaataaaccaaagatgtgtggagcaagagatagtggtaatctatgagagcaaatggcttccaagctaacaacaa 21812417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 19992135 - 19992219
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||  |||||||    
T  19992135 tcacaccaatgaaataaaccaaagatgtgtggagcaggtgatagtgataatcaatgagaacaaatggcttccaagcttacaacaa 19992219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 1533730 - 1533608
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| | ||||||||||||||||||   |||| ||||||||||||||   |||||||||||| ||||||| |||  |||||||||||  |    
T  1533730 tgttgtgaatccggttaaaactcacaccaatgaaa---acaaagatgtgtggagcaaaatatagtggtaatcaatgagaaaaaa--gtttccaagcaaca 1533636  T
Q  250 acaacaaaactagccctagactagtgta 277  Q
    |||||||||| ||||| || ||||||||    
T  1533635 acaacaaaaccagccccagtctagtgta 1533608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 16879894 - 16879970
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagc 247  Q
    |||||||||||| |||||| ||| ||||||||||||||| ||||| ||||||| |||||  |||||||  |||||||    
T  16879894 tcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagc 16879970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 16884750 - 16884826
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagc 247  Q
    |||||||||||| |||||| ||| ||||||||||||||| ||||| ||||||| |||||  |||||||  |||||||    
T  16884750 tcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagc 16884826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 24261587 - 24261511
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagc 247  Q
    |||||||||||| |||||| ||| ||||||||||||||| ||||| ||||||| |||||  |||||||  |||||||    
T  24261587 tcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagc 24261511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 24266466 - 24266390
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagc 247  Q
    |||||||||||| |||||| ||| ||||||||||||||| ||||| ||||||| |||||  |||||||  |||||||    
T  24266466 tcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagc 24266390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 11856795 - 11856903
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  11856795 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagac 11856894  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  11856895 tagtgtata 11856903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 14737838 - 14737730
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  14737838 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagac 14737739  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  14737738 tagtgtata 14737730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 14742697 - 14742589
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca---aacaacaaaactagccctaga 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||   ||||||||||| |||||||||    
T  14742697 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcatacaacaacaaaac-agccctaga 14742599  T
Q  270 ctagtgtata 279  Q
    ||||||||||    
T  14742598 ctagtgtata 14742589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 22010958 - 22010875
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  22010958 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaa 22010875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 6438324 - 6438407
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  6438324 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcaatgagaaccaatggcttccaagcaaacaacaa 6438407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 28184325 - 28184436
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaac--aaatggtttccaagcaaacaaca--aaactagcccta 267  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||  ||||||| |||||||||||||||  |||  |||||||    
T  28184325 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaaaatggtctccaagcaaacaacaacaaaacagcccta 28184424  T
Q  268 gactagtgtata 279  Q
    ||||||||||||    
T  28184425 gactagtgtata 28184436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 28155832 - 28155749
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| | ||||| ||||||||    
T  28155832 tcacaccaatgcaataaacaatgatgtgtggagcaagtgatagtgataatcaatgagagcaaatggtcttcaagctaacaacaa 28155749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 30126084 - 30125960
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaa-- 249  Q
    |||||||| ||||| ||||| ||||||||||||   |||||| ||||||||||||||| | ||||| ||||| |||||  |||||||| ||||||| |      
T  30126084 tgttgtgaatccggttgaaaatcacaccaatga---aaacaaagatgtgtggagcaagaggtagtgataatctatgag-ccaaatggtctccaagctaac 30125989  T
Q  250 -acaacaaaactagccctagactagtgta 277  Q
     |||||||||  |||||||||||||||||    
T  30125988 tacaacaaaaacagccctagactagtgta 30125960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 5675057 - 5674934
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| | ||||||||||||||||||   |||| ||||||||||||||  ||||||||||||| | ||| | ||| | || |||||||  |    
T  5675057 tgttgtgaatccggttaaaactcacaccaatgaaa---acaaagatgtgtggagcaaaagatagtggtaatcaaagagta-aaaagtttcccaagcaaca 5674962  T
Q  250 acaacaaaactagccctagactagtgta 277  Q
    |||||||||| |||||||| ||||||||    
T  5674961 acaacaaaaccagccctagtctagtgta 5674934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 6005239 - 6005324
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  6005239 tcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 6005324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 5343322 - 5343387
Alignment:
Q  191 caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  5343322 caatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 5343387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 33330690 - 33330625
Alignment:
Q  191 caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  33330690 caatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 33330625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 33336207 - 33336122
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| | ||||| |||||  |||||||  ||||| | ||||||||    
T  33336207 tcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaaactaacaacaa 33336122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 16838566 - 16838651
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||| | ||||| |||||  |||||||  | ||||| ||||||||    
T  16838566 tcacaccaatgagaataaaccaatgatatgtggagcaagtgatagagataatctatgagtgcaaatggccttcaagctaacaacaa 16838651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 22173456 - 22173348
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctagac 270  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  22173456 tcacaccaatgaaataaacaatgatgtgtggagcaagagatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaacaaaacagccctagac 22173357  T
Q  271 tagtgtata 279  Q
    |||||||||    
T  22173356 tagtgtata 22173348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 150 - 277
Target Start/End: Original strand, 7167049 - 7167174
Alignment:
Q  150 tctgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca- 248  Q
    |||||||||| ||||| ||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||     
T  7167049 tctgttgtgaatccggttgaaactcacaccaatgaaa--aacaaagatgtgtggagcaagagatagtggtaatctatgagca-aaatggtttccaagcaa 7167145  T
Q  249 -aacaacaaaactagccctagactagtgta 277  Q
     ||||||||||| |||||||||||||||||    
T  7167146 caacaacaaaac-agccctagactagtgta 7167174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 18656256 - 18656338
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||    
T  18656256 tcacaccaatgaaa-atacaatgatgtgtggagcaagtgatggtggtaatcaatgagaacaaatggtctccaagctaacaacaa 18656338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 2671876 - 2671776
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    |||||||| ||||| | ||||||||||||||||||   |||| ||||||||||||||| ||||||||||||| |||||  |||||||| |||||||||||    
T  2671876 tgttgtgaatccggttaaaactcacaccaatgaaa---acaaagatgtgtggagcaagagatagtggtaatctatgag-ccaaatggtctccaagcaaac 2671781  T
Q  252 aacaa 256  Q
    |||||    
T  2671780 aacaa 2671776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 8512037 - 8512122
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| | ||||| |||||| ||||||| |||||||| ||||||||    
T  8512037 tcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagagcaaatggcttccaagctaacaacaa 8512122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 8516917 - 8517002
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| | ||||| |||||| ||||||| |||||||| ||||||||    
T  8516917 tcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagagcaaatggcttccaagctaacaacaa 8517002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 28504127 - 28504020
Alignment:
Q  170 aactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--aacaacaaaactagcccta 267  Q
    ||||||||||||||||   ||||||||||||||||||||  | ||||| ||||| ||||||| ||||||||||||||||  ||||||||||| ||||||     
T  28504127 aactcacaccaatgaat--aacaatgatgtgtggagcaaaaggtagtgataatctatgagaa-aaatggtttccaagcaacaacaacaaaac-agccctt 28504032  T
Q  268 gactagtgtata 279  Q
    ||||||||||||    
T  28504031 gactagtgtata 28504020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 255
Target Start/End: Complemental strand, 40373085 - 40372986
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    |||||||| ||||| | ||||||||||||||||||   |||| | ||||||||||||| ||||||||||||| ||| | | |||||||||||||||||||    
T  40373085 tgttgtgaatccggttaaaactcacaccaatgaaa---acaaaggtgtgtggagcaagagatagtggtaatcaatgggca-aaatggtttccaagcaaac 40372990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 8739354 - 8739254
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    |||||||| | ||| ||| ||||||||||||||||   |||| |||||||||||||||  |||||||||||| |||||  |||||||||||||||||||     
T  8739354 tgttgtgaattcggttgagactcacaccaatgaaa---acaaagatgtgtggagcaagaaatagtggtaatctatgag-tcaaatggtttccaagcaaat 8739259  T
Q  252 aacaa 256  Q
    |||||    
T  8739258 aacaa 8739254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 9091592 - 9091492
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    |||||||| | ||| ||| ||||||||||||||||   |||| |||||||||||||||  |||||||||||| |||||  |||||||||||||||||||     
T  9091592 tgttgtgaattcggttgagactcacaccaatgaaa---acaaagatgtgtggagcaagaaatagtggtaatctatgag-tcaaatggtttccaagcaaat 9091497  T
Q  252 aacaa 256  Q
    |||||    
T  9091496 aacaa 9091492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 2677351 - 2677266
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| | ||||| |||||| |||||||  ||||||| ||||||||    
T  2677351 tcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagagcaaatggcctccaagctaacaacaa 2677266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 2673195 - 2673110
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| | ||||| ||||||  ||||||  ||||||| ||||||||    
T  2673195 tcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagagtaaatggcctccaagctaacaacaa 2673110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 8477189 - 8477295
Alignment:
Q  169 aaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--aacaacaaaactagccct 266  Q
    ||||||||||||||||||   |||| ||||||||||||||  ||||||||||||| | ||| | ||| | || |||||||  ||||||||||| ||||||    
T  8477189 aaactcacaccaatgaaa---acaaagatgtgtggagcaaaagatagtggtaatcaaagagta-aaaagtttcccaagcaacaacaacaaaaccagccct 8477284  T
Q  267 agactagtgta 277  Q
    |||||||||||    
T  8477285 agactagtgta 8477295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 10207755 - 10207840
Alignment:
Q  173 tcacaccaatga-aataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  10207755 tcacaccaatgagaataaaccaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 10207840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 44312885 - 44312802
Alignment:
Q  173 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  44312885 tcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcaatgagaacaaatggtctccaagcaaacaacaa 44312802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 32246607 - 32246716
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaaca--aaactagccctaga 269  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||  |||  || ||||||    
T  32246607 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtggtaatctatgagaacaaatggtctccaagctaacaacaacaaaacagtcctaga 32246706  T
Q  270 ctagtgtata 279  Q
    ||||||||||    
T  32246707 ctagtgtata 32246716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 277
Target Start/End: Complemental strand, 11099219 - 11099093
Alignment:
Q  150 tctgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca- 248  Q
    |||||||||| ||||| ||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||| |||| |  ||||||||||||||||     
T  11099219 tctgttgtgaatccggttgaaactcacaccaatgaaa--aacaaagatgtgtggagcaagagatagtggtaatcaatga-acaaaatggtttccaagcaa 11099123  T
Q  249 -aacaacaaaactagccctagactagtgta 277  Q
     ||||||||||  |||||||||||||||||    
T  11099122 caacaacaaaaacagccctagactagtgta 11099093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 39812250 - 39812166
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||    
T  39812250 tcacaccaatgaaataaaccaaagatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagccaacaacaa 39812166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 19344243 - 19344327
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||| |||||||  ||||||| ||||||||    
T  19344243 tcacaccaatgaaataaaccaaagatgtgtggagcaagagatagtggtaatctatgagagcaaatggcctccaagctaacaacaa 19344327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 19349101 - 19349185
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||| |||||||  ||||||| ||||||||    
T  19349101 tcacaccaatgaaataaaccaaagatgtgtggagcaagagatagtggtaatctatgagagcaaatggcctccaagctaacaacaa 19349185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 152 - 256
Target Start/End: Complemental strand, 9296691 - 9296591
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    |||||||| ||||| | ||||||||||||||||||   |||| ||||||||||||||  | ||||||||||| ||||| | |||||||||||||||||||    
T  9296691 tgttgtgaatccggttaaaactcacaccaatgaaa---acaaagatgtgtggagcaaaaggtagtggtaatctatgagca-aaatggtttccaagcaaac 9296596  T
Q  252 aacaa 256  Q
    |||||    
T  9296595 aacaa 9296591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 14291295 - 14291395
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    |||||||| ||||| | ||||||||||||||||||   |||| | ||||||||||||| ||||||||||||| ||| | | |||||||||||||||||||    
T  14291295 tgttgtgaatccggttaaaactcacaccaatgaaa---acaaaggtgtgtggagcaagagatagtggtaatcaatgggca-aaatggtttccaagcaaac 14291390  T
Q  252 aacaa 256  Q
    |||||    
T  14291391 aacaa 14291395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 25403443 - 25403565
Alignment:
Q  152 tgttgtgattccggctgaaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagca--a 249  Q
    |||||||| ||||| |||||||||||||||||   ||||||| ||||||||||||||  |  |||||||||| ||| |   |||  || ||||||||  |    
T  25403443 tgttgtgaatccggttgaaactcacaccaatg---taaacaaagatgtgtggagcaaaaggaagtggtaatctatgtg--taaagtgtctccaagcaaca 25403537  T
Q  250 acaacaaaactagccctagactagtgta 277  Q
    |||||||||  |||||||||||||||||    
T  25403538 acaacaaaaacagccctagactagtgta 25403565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 25445352 - 25445268
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||    
T  25445352 tcacaccaatgaaataaaccaatgatgtgtggagcaagcgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaa 25445268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 39445322 - 39445406
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||||    
T  39445322 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtgataatcaatgtgaacaaatggcttccaagcaaacaacaa 39445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 44024135 - 44024051
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||    
T  44024135 tcacaccaatgaaataaaccaatgatgtgtggagcaactgatagtgataatcaatgagaacaaatggcttccaagcaaacaacaa 44024051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 41386571 - 41386650
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  41386571 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcaaac 41386650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 41398060 - 41398144
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||    
T  41398060 tcacaccaatgaaataaaccaattatgtgtggagcaagtgatagtgataatcaatgagaacatatggtctccaagcaaacaacaa 41398144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 1055274 - 1055190
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| |||||||||  ||||||||  |||||||    
T  1055274 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtgataatcaatgtgaacaaatgtcttccaagcttacaacaa 1055190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 43988709 - 43988644
Alignment:
Q  191 caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||||||||| | ||||| |||||| ||||||| |||||||| ||||||||    
T  43988709 caatgatgtgtggagcaagtgatagagataatctatgagagcaaatggcttccaagctaacaacaa 43988644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 24787624 - 24787564
Alignment:
Q  188 aaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaa 249  Q
    |||||| ||||||||||||||| ||||||||||||  ||||| | |||||||||||||||||    
T  24787624 aaacaaagatgtgtggagcaagagatagtggtaataaatgagca-aaatggtttccaagcaa 24787564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 34211 - 34132
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaac 251  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  34211 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagaacaaatggtctccaagcaaac 34132  T

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Target: scaffold0464 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 185 - 269
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||    
T  185 tcacaccaatgaaataaaccaaagatgtgtggagcaagtgatggtgataatcaatgagaacaaatggcttccaagcaaacaacaa 269  T

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Target: scaffold0355 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 9902 - 9818
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||| ||||| ||||||||||    
T  9902 tcacaccaatgaaataaaccaatgatgtgtggagcaagtgatagtgataatcaatgagagcaaatggtctccaaccaaacaacaa 9818  T

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Target: scaffold0355; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 143 - 65
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||| |||||||| |||||||||||||||||||||      ||||| |||||| |||||||| |||||| |||||||||    
T  143 tcacaccaattaaataaaccaatgatgtgtggagcaagtga------taatcaatgagagcaaatggtctccaagtaaacaacaa 65  T

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Target: scaffold0978 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 510 - 433
Alignment:
Q  169 aaactcacaccaatgaaataaacaatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaa 249  Q
    ||||||||||||||||||   |||| ||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||    
T  510 aaactcacaccaatgaaa---acaaagatgtgtggagcaagagatagtggtaatctatgagcaaaaatggtttccaagcaa 433  T

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Target: scaffold0479 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 13171 - 13233
Alignment:
Q  173 tcacaccaatgaaataaac-aatgatgtgtggagcaagtgatagtggtaatcgatgagaacaa 234  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||| ||||| ||||||||||    
T  13171 tcacaccaatgaaataaaccaaagatatgtggagcaagtgatagtgataatcaatgagaacaa 13233  T

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Target: scaffold0197 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 19428 - 19343
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  19428 tcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 19343  T

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Target: scaffold0197; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 14573 - 14497
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagc 247  Q
    |||||||||||| |||||| ||| ||||||||||||||| ||||| ||||||| |||||  |||||||  |||||||    
T  14573 tcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagc 14497  T

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Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 149219 - 149134
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| | ||||| |||||  |||||||  ||||||| ||||||||    
T  149219 tcacaccaatgagaataaatcaatgatgtgtggagcaagtgatagagataatctatgagtgcaaatggcctccaagctaacaacaa 149134  T

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Target: scaffold0259 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 2514 - 2429
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagcaaacaacaa 256  Q
    |||||||||||| |||||| ||||||||||||||||||||||||  | ||||| |||||  |||||||  ||||||| ||||||||    
T  2514 tcacaccaatgagaataaatcaatgatgtgtggagcaagtgataaagataatccatgagtgcaaatggcctccaagctaacaacaa 2429  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 182228 - 182152
Alignment:
Q  173 tcacaccaatga-aataaa-caatgatgtgtggagcaagtgatagtggtaatcgatgagaacaaatggtttccaagc 247  Q
    |||||||||||| |||||| ||| ||||||||||||||| ||||| ||||||| |||||  |||||||  |||||||    
T  182228 tcacaccaatgagaataaatcaaagatgtgtggagcaagagatagaggtaatctatgagtgcaaatggcctccaagc 182152  T

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