View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13688_high_12 (Length: 303)
Name: NF13688_high_12
Description: NF13688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13688_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 21 - 293
Target Start/End: Complemental strand, 26743858 - 26743586
Alignment:
| Q |
21 |
tatgtttagaagtaaagcaagtaagaccgaagagacaagaatatttcctgttacgtttattctttgcttcttctatttaactataaagaatacaatgccc |
120 |
Q |
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| T |
26743858 |
tatgtttagaagtaaagcaagtaagaccgaagagacaagaatatttcctgttacgtttattctttgcttcttctatttaactataaagaatacaatgccc |
26743759 |
T |
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| Q |
121 |
tttggtacttcatcatgaatcctagcatatttttatatcatatcacatcaattaatacatacaacttcaactcgaactaatcaagtagaattttcaacat |
220 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |
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| T |
26743758 |
tttggtacttcgtcatgaatcctagcatatttttatatcatatcacatcaattaatacatacaacttcaactcgaactaatcaagcagaagtttcaacat |
26743659 |
T |
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| Q |
221 |
catgttacctnnnnnnnncgtttcaacatcatgtgattaatttttattgaaaaatttgtgactgtgatctgtg |
293 |
Q |
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|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
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| T |
26743658 |
catgttacctaaaaaaaacgtttcaacatcatgtgattaattttcattgaaaaatttgtgactgtgatttgtg |
26743586 |
T |
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