View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1368_high_24 (Length: 349)
Name: NF1368_high_24
Description: NF1368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1368_high_24 |
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Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 73 - 321
Target Start/End: Original strand, 28601155 - 28601403
Alignment:
| Q |
73 |
aggagcagagagtaatggagcacatatcccagaagagttacaaacaacgttgtttgtgtccttcaaggatgcagtattattcacctttttcctaatagtt |
172 |
Q |
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| T |
28601155 |
aggaccagagagtaatggagcacatatcccagaagagttacaaacaacgttgtttgtgtccttcaaggatgcagtattattcacctttttcctaatagtt |
28601254 |
T |
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| Q |
173 |
gcaacactgaatgtatttaagtgtgtgcatccttataccagaatgtattggctctttgctttcaaaataaataatctctaactaggagtgcttctaagtg |
272 |
Q |
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| T |
28601255 |
gcaacactgaatgtatttaagtgtgtgcatccttataccagaatgtattggctgtttgctttcaaaataaataatctctaactaggagtgcttctaagtg |
28601354 |
T |
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| Q |
273 |
cattaattaattcatgttttccttactccgtttcatgatatccatggct |
321 |
Q |
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| T |
28601355 |
cattaattaattcatgttttccttactccgtttgatgatatccatggct |
28601403 |
T |
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