View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1368_high_35 (Length: 314)
Name: NF1368_high_35
Description: NF1368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1368_high_35 |
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Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 29 - 309
Target Start/End: Original strand, 24578570 - 24578852
Alignment:
| Q |
29 |
acttaccgctcatcgaaacatacactaagtaaatgtttcctaataacatgaa--cacacaaaaacctaaaaaacttcctaaagcatacatgtctccattt |
126 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24578570 |
acttaccgctcatcgaaacatacactaagtaaatgtttcctaataacatgaaaacacacaaaaacctaaaaaacttcctaaagcatacatgtctccattt |
24578669 |
T |
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| Q |
127 |
cctatgaagaccactgcaaaagtatgatttgtcatgagcttattttatatgtatcatgctattaacatacacacaaaaacaaaactcaaagtgtcaccaa |
226 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24578670 |
cctatgaagaccacttcaaaagtatgatttgtcatgagcttattttatatatatcatgctattaacatacacacaaaaacaaaactcaaagtgtcaccaa |
24578769 |
T |
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| Q |
227 |
gaaaaagtgctccaaatcaggaggtacaaagaatgaaagtggtgaccttctcaaagaacaatttgaaactaccctttgcttct |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
24578770 |
gaaaaagtgctccaaatcaggaggtacaaagaatgaaagtggtgaccttctcaaagaacaatttgaaactaccctttgtttct |
24578852 |
T |
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