View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1368_high_36 (Length: 307)
Name: NF1368_high_36
Description: NF1368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1368_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 53 - 297
Target Start/End: Original strand, 4928810 - 4929055
Alignment:
| Q |
53 |
actaaatgtgttccaatattttcattctccggcacaaattatggaagtnnnnnnnnnnn-ctttaagaactaaaatggtatatgcaattttatgtcgtga |
151 |
Q |
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| T |
4928810 |
actaaatgtgttccaatattttcattctccggcacaaattatggaagtaaaaaaaaaaaactttaagaactaaaatggtatatgcaattttatgtcgtga |
4928909 |
T |
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| Q |
152 |
actaattttggtcttttcgcatatttaatgcagataattttagaagttagactaaatgcttttgctgacaggtacatatggtttcatcgcaccagagtat |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
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| T |
4928910 |
actaattttggtcttttcgcatatttaatgcagataattttagaagttagactaaatgcttttgctgacaggtccatatggtttctgtgcaccagagtat |
4929009 |
T |
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| Q |
252 |
ctgcaaaccggaatttacacagataaatgtgacgtttactcctttg |
297 |
Q |
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||||||||| ||| |||||||||||||||||||||||||||||||| |
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| T |
4929010 |
ctgcaaaccagaacttacacagataaatgtgacgtttactcctttg |
4929055 |
T |
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