View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1368_low_35 (Length: 328)
Name: NF1368_low_35
Description: NF1368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1368_low_35 |
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Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 53 - 317
Target Start/End: Original strand, 32103404 - 32103668
Alignment:
| Q |
53 |
gttagaagaagacaaagtatgtgtgtatttttctgagacaaagtaagaagttggaagcattagaagaagaatatatagtgagtgaggaagaggaaaagaa |
152 |
Q |
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|||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32103404 |
gttagaagaagacaaagtatgtgtgtatttttataagacaaagtaaaaagttggaagcattagaagaagaatatatagtgagtgaggaagaggaaaagaa |
32103503 |
T |
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| Q |
153 |
aatgatgacgtacagttgttgtgggcaaagttgccagaagaggctataagtccactgaacagattgcaccgcagcctgcaacatgttttgaagcttactg |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32103504 |
aatgatgacgtacagttgttgtgggcaaagttgccagaagaggctataagtccactgaacagattgcaccgcagcctgcaacatgttttgaagcttactg |
32103603 |
T |
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| Q |
253 |
cctaatggagatggagccgccattctttattcattcagtcattaccaaacagtttttcctttcat |
317 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
32103604 |
cctaatggagatggagcagccattctttattcattcagtcattaccaaacagttttttctttcat |
32103668 |
T |
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