View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1368_low_44 (Length: 300)
Name: NF1368_low_44
Description: NF1368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1368_low_44 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 30 - 287
Target Start/End: Original strand, 2290207 - 2290464
Alignment:
| Q |
30 |
aaaatttacaacaaatcatcaaactgactctatgtttggaaaccaccaaaaccatagtggattagaagttatacattagaacttctagaaagagctttta |
129 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2290207 |
aaaatttacaacaaatcatcaaactgactctatgtttggaaaccaccaaaaccatagtggattagaagttatacattagaacttctagaaagagctttta |
2290306 |
T |
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| Q |
130 |
accaaaggtggcagttgacttccactaaaccaatcacaatttgagtcattgtcttatcacataatcattcttattgagtttactccgcaatccatgttgc |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2290307 |
accaaaggtggcagttgacttccactaaaccaatcacaatttgagtcattgtcttatcacataatcattcttattgagtttactccgcaatccatgttgc |
2290406 |
T |
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| Q |
230 |
atattttcaagcaacttaatccattcatctaaaatcgtttagtgcttcttatacattc |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2290407 |
atattttcaagcaacttaatccattcatctaaaatcgtttagtgcttcttatacattc |
2290464 |
T |
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