View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1368_low_68 (Length: 251)
Name: NF1368_low_68
Description: NF1368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1368_low_68 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 34888921 - 34889162
Alignment:
| Q |
1 |
catgtctaatgaagtggtagattagagttggtcaatagatattaaccacaaatttaaatgcgattaacctcaattttcaacttttcaaatctaccacatg |
100 |
Q |
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| T |
34888921 |
catgtctaatgaagtggtagattagagttggtcaatagatattaaccacaaatttaaatgcgactaacctcaattttcaacttttcaaatctaccacatg |
34889020 |
T |
|
| Q |
101 |
tgtgaactgcattaacaatttaaaaagttgtcaaatttttctgtcccaaatttaacattcaaataacatttctgtatgaaaataaatcttgtgactacga |
200 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
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| T |
34889021 |
tgtgaactgcattaacaatttaaaaagttgtctaatttttctgtcccaaatttaacattcaaataacatttctgtttgaaaataaatcttgtgactgcga |
34889120 |
T |
|
| Q |
201 |
tttgaccaccaacatcaaagtttttgtttatgatatctctgc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
34889121 |
tttgaccaccaacatcaaagtttttgtttatgatatctctgc |
34889162 |
T |
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