View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1369-INSERTION-5 (Length: 659)

Name: NF1369-INSERTION-5
Description: NF1369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1369-INSERTION-5
NF1369-INSERTION-5
[»] chr1 (55 HSPs)
chr1 (235-659)||(14764235-14764658)
chr1 (8-177)||(14764024-14764193)
chr1 (338-647)||(51218653-51218973)
chr1 (242-501)||(26055991-26056250)
chr1 (233-399)||(51726790-51726956)
chr1 (241-377)||(14169631-14169767)
chr1 (294-501)||(30551433-30551640)
chr1 (233-351)||(36511325-36511443)
chr1 (338-501)||(37624414-37624577)
chr1 (233-363)||(22167783-22167913)
chr1 (243-364)||(36509825-36509946)
chr1 (242-355)||(40811208-40811321)
chr1 (243-364)||(19466186-19466307)
chr1 (243-316)||(40110681-40110754)
chr1 (242-447)||(52742874-52743079)
chr1 (272-399)||(49141442-49141569)
chr1 (294-501)||(27689348-27689559)
chr1 (242-501)||(50678379-50678634)
chr1 (233-316)||(24516338-24516421)
chr1 (242-309)||(24517650-24517717)
chr1 (243-374)||(40109375-40109506)
chr1 (242-399)||(8092611-8092768)
chr1 (242-309)||(14765130-14765197)
chr1 (242-301)||(26803260-26803319)
chr1 (338-444)||(9633884-9633990)
chr1 (248-350)||(19464619-19464721)
chr1 (242-392)||(44977234-44977384)
chr1 (246-377)||(26801960-26802091)
chr1 (242-309)||(38280863-38280930)
chr1 (266-332)||(14171281-14171347)
chr1 (242-304)||(21246516-21246578)
chr1 (242-304)||(43808562-43808624)
chr1 (242-304)||(45042622-45042684)
chr1 (243-352)||(13641271-13641380)
chr1 (294-399)||(21277059-21277164)
chr1 (294-447)||(23082024-23082177)
chr1 (242-327)||(38283757-38283842)
chr1 (242-303)||(40812653-40812714)
chr1 (241-281)||(22169283-22169323)
chr1 (242-305)||(30743100-30743163)
chr1 (242-305)||(43807448-43807511)
chr1 (242-364)||(13930656-13930778)
chr1 (294-364)||(14071184-14071254)
chr1 (294-448)||(22766717-22766871)
chr1 (242-348)||(47410997-47411103)
chr1 (242-347)||(3979311-3979416)
chr1 (242-318)||(45570332-45570407)
chr1 (243-377)||(2972976-2973110)
chr1 (244-305)||(48332730-48332791)
chr1 (242-350)||(2237973-2238081)
chr1 (242-346)||(3978057-3978161)
chr1 (242-350)||(14390271-14390379)
chr1 (233-305)||(24502025-24502097)
chr1 (286-350)||(35684198-35684262)
chr1 (242-350)||(48935105-48935213)
[»] chr4 (56 HSPs)
chr4 (246-659)||(38418703-38419116)
chr4 (240-536)||(43894116-43894412)
chr4 (338-647)||(2293206-2293532)
chr4 (242-447)||(39592187-39592392)
chr4 (241-351)||(34439654-34439764)
chr4 (246-377)||(17319059-17319190)
chr4 (242-348)||(50531753-50531859)
chr4 (233-316)||(41348243-41348326)
chr4 (246-364)||(34438423-34438541)
chr4 (287-501)||(35787854-35788068)
chr4 (242-348)||(38417566-38417672)
chr4 (243-377)||(50530517-50530651)
chr4 (243-348)||(6139011-6139116)
chr4 (294-392)||(86868-86966)
chr4 (311-497)||(29687826-29688012)
chr4 (338-491)||(36604694-36604848)
chr4 (242-354)||(44159098-44159210)
chr4 (242-309)||(41349561-41349628)
chr4 (242-448)||(26393024-26393230)
chr4 (242-377)||(43419343-43419478)
chr4 (242-305)||(11482809-11482872)
chr4 (247-374)||(17494145-17494272)
chr4 (294-377)||(6140328-6140411)
chr4 (242-377)||(11114948-11115083)
chr4 (242-304)||(47242965-47243027)
chr4 (338-447)||(44302829-44302938)
chr4 (242-301)||(5417317-5417376)
chr4 (296-501)||(11094593-11094796)
chr4 (243-305)||(47572600-47572662)
chr4 (242-304)||(50498013-50498075)
chr4 (242-375)||(6616181-6616314)
chr4 (243-448)||(29663657-29663861)
chr4 (242-375)||(30682997-30683130)
chr4 (279-352)||(33376268-33376341)
chr4 (233-302)||(43418037-43418106)
chr4 (233-305)||(26045136-26045208)
chr4 (294-377)||(38370347-38370431)
chr4 (233-305)||(43708840-43708912)
chr4 (233-305)||(47573684-47573756)
chr4 (242-505)||(47668444-47668700)
chr4 (296-439)||(56296260-56296403)
chr4 (242-348)||(33377361-33377467)
chr4 (242-304)||(43709915-43709977)
chr4 (242-280)||(44160475-44160513)
chr4 (243-448)||(56000301-56000506)
chr4 (241-305)||(50497007-50497071)
chr4 (246-352)||(38371798-38371904)
chr4 (243-305)||(47244030-47244092)
chr4 (243-305)||(48413591-48413653)
chr4 (242-352)||(52658924-52659034)
chr4 (245-326)||(21104329-21104410)
chr4 (537-582)||(43894433-43894478)
chr4 (274-346)||(5687220-5687292)
chr4 (242-326)||(28103505-28103589)
chr4 (240-352)||(29686267-29686379)
chr4 (242-350)||(29833385-29833493)
[»] chr2 (40 HSPs)
chr2 (243-659)||(3532208-3532617)
chr2 (338-536)||(14714601-14714799)
chr2 (243-399)||(7983641-7983797)
chr2 (338-533)||(4512215-4512410)
chr2 (245-375)||(7490165-7490295)
chr2 (243-445)||(14509223-14509425)
chr2 (269-501)||(12852926-12853158)
chr2 (242-417)||(25570798-25570973)
chr2 (294-501)||(23177739-23177946)
chr2 (294-501)||(23588996-23589203)
chr2 (243-369)||(8537026-8537152)
chr2 (368-501)||(6708823-6708956)
chr2 (294-501)||(41296298-41296505)
chr2 (338-439)||(26205122-26205223)
chr2 (242-346)||(14510508-14510612)
chr2 (233-377)||(15850627-15850771)
chr2 (242-373)||(37869012-37869143)
chr2 (242-327)||(3533644-3533729)
chr2 (247-304)||(7982330-7982387)
chr2 (338-501)||(21010342-21010505)
chr2 (242-376)||(32614398-32614532)
chr2 (340-477)||(45047453-45047589)
chr2 (277-377)||(10367287-10367387)
chr2 (470-647)||(14714901-14715093)
chr2 (242-305)||(20630711-20630774)
chr2 (233-316)||(25569773-25569856)
chr2 (233-306)||(15850116-15850189)
chr2 (274-374)||(7037011-7037111)
chr2 (294-377)||(28109837-28109920)
chr2 (245-399)||(4829481-4829635)
chr2 (242-304)||(30178558-30178620)
chr2 (243-305)||(33553405-33553467)
chr2 (294-352)||(40174757-40174815)
chr2 (251-352)||(21012073-21012174)
chr2 (244-304)||(30179593-30179653)
chr2 (242-281)||(8538689-8538728)
chr2 (242-352)||(23178875-23178985)
chr2 (242-352)||(23590132-23590242)
chr2 (344-492)||(3528117-3528266)
chr2 (240-308)||(41795989-41796057)
[»] chr7 (47 HSPs)
chr7 (242-659)||(35314920-35315325)
chr7 (243-447)||(4167465-4167669)
chr7 (242-582)||(24494805-24495155)
chr7 (242-447)||(14108969-14109172)
chr7 (242-447)||(14418926-14419129)
chr7 (242-377)||(131967-132102)
chr7 (241-377)||(27899182-27899318)
chr7 (243-375)||(4857215-4857347)
chr7 (242-348)||(10257385-10257489)
chr7 (242-384)||(43930332-43930474)
chr7 (243-304)||(4168890-4168951)
chr7 (243-374)||(13286965-13287096)
chr7 (243-309)||(27897706-27897772)
chr7 (242-305)||(47537080-47537143)
chr7 (247-377)||(10256141-10256271)
chr7 (247-304)||(29409279-29409336)
chr7 (312-388)||(38406101-38406177)
chr7 (269-377)||(46458681-46458789)
chr7 (242-333)||(4858356-4858447)
chr7 (242-305)||(29344177-29344240)
chr7 (242-377)||(35484278-35484413)
chr7 (242-352)||(18802382-18802492)
chr7 (242-348)||(22061792-22061898)
chr7 (242-304)||(29408259-29408321)
chr7 (294-348)||(43007646-43007700)
chr7 (233-305)||(40881095-40881167)
chr7 (242-377)||(25154904-25155039)
chr7 (242-301)||(33071682-33071741)
chr7 (242-305)||(37781970-37782033)
chr7 (246-305)||(47927396-47927455)
chr7 (242-305)||(47928470-47928533)
chr7 (242-348)||(7148055-7148161)
chr7 (242-332)||(19278366-19278456)
chr7 (242-348)||(43006398-43006504)
chr7 (287-352)||(14206731-14206796)
chr7 (287-352)||(14215421-14215486)
chr7 (247-352)||(24873590-24873695)
chr7 (247-304)||(29345119-29345176)
chr7 (269-377)||(26406165-26406273)
chr7 (265-377)||(45719651-45719763)
chr7 (243-346)||(46674933-46675036)
chr7 (243-305)||(7338156-7338218)
chr7 (343-489)||(19848690-19848836)
chr7 (269-378)||(40930458-40930567)
chr7 (241-309)||(41985927-41985995)
chr7 (296-352)||(43936133-43936189)
chr7 (245-309)||(46457086-46457150)
[»] scaffold0098 (2 HSPs)
scaffold0098 (233-621)||(40920-41300)
scaffold0098 (242-332)||(42359-42449)
[»] chr3 (46 HSPs)
chr3 (242-536)||(17349911-17350205)
chr3 (246-639)||(39133034-39133448)
chr3 (242-399)||(23559832-23559989)
chr3 (269-501)||(11219470-11219702)
chr3 (299-491)||(7483379-7483571)
chr3 (294-501)||(53808383-53808590)
chr3 (242-439)||(12062290-12062487)
chr3 (245-448)||(43346344-43346547)
chr3 (243-448)||(21127939-21128144)
chr3 (243-352)||(43345333-43345442)
chr3 (240-406)||(25583125-25583290)
chr3 (243-447)||(8371234-8371438)
chr3 (243-327)||(23561143-23561227)
chr3 (338-501)||(32979197-32979360)
chr3 (294-501)||(34902838-34903044)
chr3 (242-377)||(48867398-48867533)
chr3 (245-377)||(35174350-35174482)
chr3 (233-332)||(35173151-35173250)
chr3 (312-505)||(47765521-47765715)
chr3 (246-352)||(48866158-48866264)
chr3 (233-305)||(2088846-2088918)
chr3 (233-305)||(50150725-50150797)
chr3 (233-304)||(1031820-1031891)
chr3 (242-305)||(33000840-33000903)
chr3 (242-305)||(39531856-39531919)
chr3 (242-352)||(7921636-7921746)
chr3 (242-352)||(25585826-25585936)
chr3 (233-302)||(45730641-45730710)
chr3 (233-301)||(39530799-39530867)
chr3 (338-447)||(31638227-31638335)
chr3 (233-303)||(46688411-46688481)
chr3 (242-348)||(51825618-51825724)
chr3 (241-302)||(12060670-12060731)
chr3 (244-301)||(32999812-32999869)
chr3 (242-347)||(54653964-54654069)
chr3 (245-305)||(4067942-4068002)
chr3 (269-392)||(19622045-19622168)
chr3 (242-305)||(50765814-50765877)
chr3 (247-352)||(32980445-32980550)
chr3 (243-304)||(53901583-53901644)
chr3 (269-377)||(26798874-26798982)
chr3 (242-345)||(43101907-43102010)
chr3 (245-323)||(38639034-38639112)
chr3 (242-348)||(42632719-42632825)
chr3 (242-352)||(48252946-48253056)
chr3 (242-323)||(19579316-19579397)
[»] scaffold0084 (2 HSPs)
scaffold0084 (243-536)||(13013-13306)
scaffold0084 (242-317)||(11719-11794)
[»] chr8 (62 HSPs)
chr8 (240-647)||(44102976-44103401)
chr8 (242-568)||(21670077-21670411)
chr8 (242-497)||(10052117-10052372)
chr8 (242-659)||(39325511-39325937)
chr8 (338-500)||(21961932-21962094)
chr8 (243-392)||(41522641-41522790)
chr8 (242-501)||(36756077-36756337)
chr8 (242-377)||(8095359-8095494)
chr8 (243-411)||(117062-117230)
chr8 (338-501)||(13513529-13513692)
chr8 (338-501)||(13603062-13603225)
chr8 (245-399)||(13366996-13367150)
chr8 (245-501)||(39546521-39546777)
chr8 (242-447)||(37276141-37276346)
chr8 (246-377)||(20308622-20308753)
chr8 (246-377)||(21095255-21095386)
chr8 (242-316)||(22621163-22621237)
chr8 (242-448)||(34617092-34617298)
chr8 (246-386)||(39220696-39220837)
chr8 (242-377)||(35943920-35944056)
chr8 (294-501)||(13363422-13363629)
chr8 (242-309)||(22619908-22619975)
chr8 (243-377)||(2421261-2421395)
chr8 (269-447)||(7486117-7486295)
chr8 (242-448)||(24069343-24069549)
chr8 (243-309)||(34616143-34616209)
chr8 (241-305)||(4534046-4534110)
chr8 (241-305)||(16346111-16346175)
chr8 (243-323)||(41521331-41521411)
chr8 (242-305)||(35463029-35463092)
chr8 (245-305)||(9190482-9190542)
chr8 (242-305)||(35462680-35462743)
chr8 (242-304)||(12818767-12818829)
chr8 (243-417)||(36070192-36070366)
chr8 (233-309)||(8096581-8096657)
chr8 (245-301)||(22913208-22913264)
chr8 (241-305)||(45195844-45195908)
chr8 (242-305)||(9189407-9189470)
chr8 (294-377)||(19913557-19913640)
chr8 (242-301)||(22914234-22914293)
chr8 (242-352)||(36940026-36940136)
chr8 (298-391)||(36938750-36938843)
chr8 (233-305)||(4535069-4535140)
chr8 (240-352)||(10053737-10053849)
chr8 (233-305)||(12820138-12820210)
chr8 (241-305)||(24750071-24750135)
chr8 (242-346)||(31623919-31624023)
chr8 (242-281)||(2419887-2419926)
chr8 (294-377)||(16363780-16363863)
chr8 (242-305)||(23768525-23768588)
chr8 (242-305)||(31872844-31872907)
chr8 (242-309)||(41866907-41866974)
chr8 (242-309)||(43386738-43386805)
chr8 (338-447)||(21267241-21267351)
chr8 (242-352)||(24068343-24068453)
chr8 (242-360)||(29738304-29738422)
chr8 (242-332)||(35945450-35945540)
chr8 (245-346)||(31625383-31625484)
chr8 (338-399)||(44606248-44606309)
chr8 (298-434)||(8395064-8395200)
chr8 (243-399)||(37324634-37324790)
chr8 (241-305)||(43579692-43579756)
[»] chr5 (41 HSPs)
chr5 (243-447)||(7426655-7426859)
chr5 (242-501)||(21387650-21387909)
chr5 (242-377)||(12830906-12831041)
chr5 (233-364)||(42510118-42510249)
chr5 (246-377)||(12862886-12863017)
chr5 (242-352)||(15857611-15857721)
chr5 (242-375)||(32734145-32734277)
chr5 (243-348)||(32735476-32735581)
chr5 (244-332)||(22819562-22819650)
chr5 (246-377)||(40058035-40058166)
chr5 (242-316)||(8188229-8188303)
chr5 (233-305)||(11907201-11907273)
chr5 (269-489)||(18693738-18693957)
chr5 (237-351)||(42511660-42511774)
chr5 (237-326)||(24761740-24761829)
chr5 (269-399)||(38471329-38471459)
chr5 (242-304)||(39135689-39135751)
chr5 (242-399)||(5382955-5383112)
chr5 (242-319)||(8187179-8187255)
chr5 (283-439)||(2167421-2167576)
chr5 (233-305)||(24070409-24070481)
chr5 (242-332)||(18677989-18678079)
chr5 (243-305)||(24071483-24071545)
chr5 (233-303)||(39134671-39134741)
chr5 (233-306)||(12861553-12861626)
chr5 (242-305)||(8284284-8284347)
chr5 (242-377)||(19525256-19525391)
chr5 (242-305)||(21006153-21006216)
chr5 (298-377)||(22819485-22819564)
chr5 (242-352)||(224583-224693)
chr5 (233-306)||(12829574-12829647)
chr5 (243-316)||(30253600-30253673)
chr5 (242-305)||(21011848-21011911)
chr5 (240-326)||(12933762-12933848)
chr5 (240-326)||(12947923-12948009)
chr5 (242-352)||(22812380-22812490)
chr5 (269-350)||(4566991-4567072)
chr5 (243-276)||(7427993-7428026)
chr5 (242-346)||(8762399-8762503)
chr5 (245-289)||(11906371-11906415)
chr5 (296-352)||(38473548-38473604)
[»] scaffold0015 (1 HSPs)
scaffold0015 (338-500)||(207643-207805)
[»] chr6 (25 HSPs)
chr6 (241-399)||(14328720-14328878)
chr6 (241-399)||(14421730-14421888)
chr6 (242-505)||(18139326-18139590)
chr6 (243-327)||(14326167-14326251)
chr6 (243-327)||(14419177-14419261)
chr6 (242-309)||(13800044-13800111)
chr6 (294-447)||(13507070-13507222)
chr6 (242-377)||(31738376-31738511)
chr6 (269-399)||(293586-293716)
chr6 (242-374)||(27440146-27440278)
chr6 (242-305)||(1757534-1757597)
chr6 (242-377)||(9927619-9927753)
chr6 (425-501)||(34084078-34084154)
chr6 (243-305)||(27107195-27107257)
chr6 (243-305)||(27149001-27149063)
chr6 (243-352)||(22299896-22300005)
chr6 (242-411)||(33801951-33802120)
chr6 (243-291)||(5693641-5693689)
chr6 (246-294)||(16269819-16269867)
chr6 (242-302)||(27108217-27108277)
chr6 (242-302)||(27150014-27150074)
chr6 (241-288)||(16251633-16251680)
chr6 (242-305)||(26452273-26452336)
chr6 (242-348)||(8412313-8412419)
chr6 (242-326)||(31740291-31740375)
[»] scaffold1974 (1 HSPs)
scaffold1974 (242-501)||(472-731)
[»] scaffold1878 (1 HSPs)
scaffold1878 (242-501)||(543-802)
[»] scaffold0051 (2 HSPs)
scaffold0051 (338-500)||(39746-39908)
scaffold0051 (287-352)||(22185-22250)
[»] scaffold0290 (2 HSPs)
scaffold0290 (242-444)||(9379-9581)
scaffold0290 (242-352)||(8392-8502)
[»] scaffold0009 (2 HSPs)
scaffold0009 (242-305)||(205592-205655)
scaffold0009 (242-304)||(204549-204613)
[»] scaffold0166 (1 HSPs)
scaffold0166 (237-326)||(4237-4326)
[»] scaffold0003 (1 HSPs)
scaffold0003 (242-374)||(47083-47215)
[»] scaffold0122 (2 HSPs)
scaffold0122 (242-335)||(17170-17263)
scaffold0122 (242-377)||(15963-16093)
[»] scaffold0045 (1 HSPs)
scaffold0045 (240-398)||(77126-77286)
[»] scaffold0041 (1 HSPs)
scaffold0041 (233-305)||(85116-85188)
[»] scaffold0025 (1 HSPs)
scaffold0025 (242-447)||(56597-56803)
[»] scaffold0177 (1 HSPs)
scaffold0177 (242-350)||(1768-1876)
[»] scaffold0178 (2 HSPs)
scaffold0178 (338-377)||(1320-1359)
scaffold0178 (242-352)||(2258-2368)
[»] scaffold0046 (2 HSPs)
scaffold0046 (242-309)||(23419-23486)
scaffold0046 (242-352)||(24808-24918)


Alignment Details
Target: chr1 (Bit Score: 301; Significance: 1e-169; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 235 - 659
Target Start/End: Original strand, 14764235 - 14764658
Alignment:
Q  235 tcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttag 334  Q
    |||||| |||||||||||||||||||||| | |||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||    
T  14764235 tcccctggtcccttaacttattttatttttttagtttgatcccttaattattaagtgtgttaatttggtctcataagtcttctgtcgtttactgttttag 14764334  T
Q  335 ttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgat 434  Q
    | ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| ||| |||||||  ||||||| |||||||||||||    
T  14764335 tcatctctgttagtttttaacattaaatgtttaaggtgaaccttatttaaaggtggtccaccatacgccatactaaatttttttattttaaccatttgat 14764434  T
Q  435 tttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctca 534  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||    
T  14764435 tttttctttaaaaaatagttgttaaatcatgtagggtctattgcactttactgtgaaccactaacacctaagttaatccattcatctttttcttccatca 14764534  T
Q  535 tcatcttcaacaacaacttcatcgataaactccaaaaaatcccaaaaataataattaaacctactatttaataaccatgcaaccatcgtcatcttcatct 634  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||  |||||||||| ||||||||||    
T  14764535 tcatcttcaacaacaacttcatcaataaactccagaaaatcccaaaaatattaattaaaccttctatttaat-accacacaaccatcgtgatcttcatct 14764633  T
Q  635 atcatcatcaacatcattcttccta 659  Q
    ||||||||||||||| |||||||||    
T  14764634 atcatcatcaacatccttcttccta 14764658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 8 - 177
Target Start/End: Original strand, 14764024 - 14764193
Alignment:
Q  8 gttctaagtgtttgtaggcaaacattaggtgcccagggcaactttcattaatttaatttgaatccactgttttggtaaaacttaatttgttagagattca 107  Q
    |||| ||||||||||| |||||||||||||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14764024 gttcaaagtgtttgtaagcaaacattaggtgcctagagcaattttcattaatttaatttgaatcaactgttttggtaaaacttaatttgttagagattca 14764123  T
Q  108 accaactaaatcataccatgtaattatttttggagaaatttaagataataaccttttctttttaggggag 177  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  14764124 accaactaaatcataccatgtaaatatttttggagaaattttagataataaccttttttttttaggggag 14764193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 338 - 647
Target Start/End: Complemental strand, 51218973 - 51218653
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattt- 436  Q
    |||||||||||||||||||| |||||| ||| |||||||||||| |||| ||||| ||||||||||||| ||||  |||| || |||| ||||||||||     
T  51218973 tctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccaccatatgccttattaaattttttaattttaatcatttgattta 51218874  T
Q  437 tttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc 536  Q
    |||| |||||| |   ||||| |||||||| |||||||||| ||||| |||||||||||| |||| |||   | || ||||||||| |||||||||||||    
T  51218873 tttcattaaaagaggactgttgaatcatgtggggtctattgtactttcctgtgaaccactcacacctaataaaatcgattcatcttcttcttccctcatc 51218774  T
Q  537 --------atcttcaacaacaacttcatcgataaactccaaaaaatcc--caaaaataataattaaacctactatttaataaccatgcaaccatc---gt 623  Q
            |||||||||||||||||||||  |||| |||| |||||||  ||||||||| ||||   |||||| |||||| | ||  ||||||||   ||    
T  51218773 tcttcgtgatcttcaacaacaacttcatcagtaaaatccagaaaatcccacaaaaataaaaatt---cctactctttaatcatcacacaaccatcattgt 51218677  T
Q  624 catcttcatctatcatcatcaaca 647  Q
    ||||||||||||||| ||||||||    
T  51218676 catcttcatctatcagcatcaaca 51218653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 242 - 501
Target Start/End: Complemental strand, 26056250 - 26055991
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| |||| ||| ||| || ||| ||||||||||||||||  |||| ||||||||||| |||| ||  ||||    
T  26056250 gtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctc 26056151  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||| ||||||||| ||| || ||| |||||||||||| |||||||||  |||||| ||| || ||||  |||| || ||||||||||||||| ||||    
T  26056150 cgttagattttaacatcaaaagtctaaagtgaaccatatttaaaggtggttcaccataggccgtattaaattttttaattttaaccatttgatttattct 26056051  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    |||||| |   | ||| ||| ||||||||||||||| ||||| |||||||||||||||||    
T  26056050 ttaaaagaggaccgttgaattatgtagggtctattgtactttcctgtgaaccactaacac 26055991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 233 - 399
Target Start/End: Complemental strand, 51726956 - 51726790
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||| ||  |||| ||| || ||| |||||||||| |||||  |||||||||||||||| ||||    
T  51726956 catcccccggtcccttaacttattttattttctcagtttggtcatttaactataaagtgtctcaatttggttccataaatcttctgtcgtttactatttt 51726857  T
Q  333 agttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    |||  || ||||||||||||||| |||||||| ||||||||||||  || | |||||||| ||||||    
T  51726856 agtcctcaccgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 51726790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 241 - 377
Target Start/End: Original strand, 14169631 - 14169767
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatct 340  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| |||||| ||||||||||||||||  |||| ||||||||||| |||| ||  | |    
T  14169631 agtcccttaacttattttattttctcagtttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttat 14169730  T
Q  341 ccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    | ||||||||||||| |||||||| ||||||||||||    
T  14169731 ctgttagtttttaaccttaaatgtctaaggtgaacca 14169767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 294 - 501
Target Start/End: Complemental strand, 30551640 - 30551433
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||||||||||| || || |||| |||||  || |||| || ||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||      
T  30551640 tcaatttggtcccttatgttttctatcgttacctcttttggtcatctccgttagtttttagcatcaaatgtctaaagtgaaccatattaaaaggtggtgc 30551541  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaacc 493  Q
    |||||   ||||| ||||  |||| || |||||| ||||||||||||||||||| |    ||||  |||||||||||||||||| | |||| ||||||||    
T  30551540 accatggaccttagtaaattttttaattttaaccttttgattttttctttaaaagaggattgttggatcatgtagggtctattgtattttagtgtgaacc 30551441  T
Q  494 actaacac 501  Q
    ||||||||    
T  30551440 actaacac 30551433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 233 - 351
Target Start/End: Complemental strand, 36511443 - 36511325
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    ||||||| |||||||||| ||||||||||||||||||||| |||||||| ||| || ||| ||||||||||||||||  |||||||||||||||| ||||    
T  36511443 catcccccagtcccttaatttattttattttctcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactatttt 36511344  T
Q  333 agttatctccgttagtttt 351  Q
     || |||||||||||||||    
T  36511343 ggtcatctccgttagtttt 36511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 37624577 - 37624414
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||| ||  |||||   ||||| ||||  |||| || |||||| |||||||||    
T  37624577 tctccgttagtttttaacatcaaatgtctaaagtgaaccatattaaaaggttgtgcaccatggaccttagtaaattttttaattttaaccttttgatttt 37624478  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    |||||||||| |    |||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  37624477 ttctttaaaagaggattgttgaatcatgtagggtctattgtattttagtgtgaaccactaacac 37624414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 233 - 363
Target Start/End: Original strand, 22167783 - 22167913
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    ||||||||| ||||||||||||||||| |||||||||||  |||||||| |||||| ||| ||||||||||||||||  ||||||| |||||| | ||||    
T  22167783 catcccctaatcccttaacttattttaatttctcagtttagtcccttaaatattaagtgtttcaatttggtcccataaatcttctgccgtttattatttt 22167882  T
Q  333 agttatctccgttagtttttaacattaaatg 363  Q
     ||| |||| ||||||||||||| |||||||    
T  22167883 ggttctctctgttagtttttaaccttaaatg 22167913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 243 - 364
Target Start/End: Original strand, 36509825 - 36509946
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||||||||||||||||||||||||| |||||||| ||| || ||| |||||||||| |||||  ||||||| |||||||| |||| ||| |||||    
T  36509825 tcccttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctcc 36509924  T
Q  343 gttagtttttaacattaaatgt 364  Q
    ||||||||||||| | ||||||    
T  36509925 gttagtttttaacctcaaatgt 36509946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 242 - 355
Target Start/End: Original strand, 40811208 - 40811321
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||  |||| || |||||| | |||| || |||||    
T  40811208 gtcccttaacttattctattttctcagtttgatcccttaactattaaatgtctcaatttgatcccataactcttttgccgtttattattttggtcatctc 40811307  T
Q  342 cgttagtttttaac 355  Q
    ||||||||||||||    
T  40811308 cgttagtttttaac 40811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 19466307 - 19466186
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||| ||||||||||||||||||||||| ||| |||| ||| || ||| ||||||||||||||||  |||||||||||||||| || | ||| |||||    
T  19466307 tccctttacttattttattttctcagtttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctcc 19466208  T
Q  343 gttagtttttaacattaaatgt 364  Q
    ||||||||||||| | ||||||    
T  19466207 gttagtttttaacctcaaatgt 19466186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 316
Target Start/End: Complemental strand, 40110754 - 40110681
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttc 316  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  40110754 tcccttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtcccataagtcttc 40110681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 447
Target Start/End: Complemental strand, 52743079 - 52742874
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||| ||||||||   || ||| |||| |||| ||| ||| || ||| |||| |||||||| ||||| || |||||||||||||| | ||  ||||    
T  52743079 gtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatgtcgtttactgttatggtcctctc 52742980  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||||||||||||| |||||||||||||||||||| || |||||||||  ||||||  ||| | || |  |||  || |||||| |||||||||||||    
T  52742979 cgttagtttttaacatcaaatgtttaaggtgaaccatgtttaaaggtggtacaccatagacctaattacatttttaaattttaaccttttgattttttct 52742880  T
Q  442 ttaaaa 447  Q
    ||||||    
T  52742879 ttaaaa 52742874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 272 - 399
Target Start/End: Complemental strand, 49141569 - 49141442
Alignment:
Q  272 gatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggt 371  Q
    |||||||||| |||||| ||| |||| |||||||||||  | ||||| |||||||  ||||||| ||||||||||||||||||||| |||||| ||||||    
T  49141569 gatcccttaactattaagtgtttcaaattggtcccataatttttctgccgtttaccattttagtcatctccgttagtttttaacatcaaatgtctaaggt 49141470  T
Q  372 gaaccatattaaaaggtggtcaaccata 399  Q
    |||||||||| |||| || || ||||||    
T  49141469 gaaccatatttaaagttgttccaccata 49141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 294 - 501
Target Start/End: Original strand, 27689348 - 27689559
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||||||||| | || || ||||||||||  || |||| ||  |||||||||||||||||||  |||||| ||| |||||||||||| ||||||||||     
T  27689348 tcaatttggtctcttatgttttctgtcgttacctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtcc 27689447  T
Q  394 accatatgccttactaaaaattttt----atcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtg 489  Q
    | |||   ||||| |||   |||||    || |||||| ||||||||||||||||||| |||  ||||  |||||||||||||||||| | |||| ||||    
T  27689448 atcatggaccttattaatttttttttttaattttaaccttttgattttttctttaaaagataattgttggatcatgtagggtctattgtattttagtgtg 27689547  T
Q  490 aaccactaacac 501  Q
    ||||||||||||    
T  27689548 aaccactaacac 27689559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 242 - 501
Target Start/End: Original strand, 50678379 - 50678634
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| ||||||||||||| ||| |||||| |||||||||  || ||  ||| ||| ||||  || |||| ||  ||||    
T  50678379 gtcccttaacttatttttgaatttcattttgatcccttaactataaaatgtctcaatttgg--ccttaaatct-ctgccgttacctcttttggtcctctc 50678475  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
     ||||||||||||||| |||  | |||||||||||||||| |||||||||  ||||||  || || | ||| |||| || ||||||||||||||||||||    
T  50678476 tgttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggttcaccatagaccgta-ttaaatttttaattttaaccatttgattttttct 50678574  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    |||||| |   ||||| ||| |  |||||||||||| |||||||||||||| ||||||||    
T  50678575 ttaaaagaggactgttgaattacatagggtctattgtactttactgtgaacgactaacac 50678634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 24516338 - 24516421
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttc 316  Q
    |||||||  |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||| ||||||    
T  24516338 catcccccggtcccttaacttattttattttctgagtttgatcccttaactattaagtgtgtcaatttggtctcataagtcttc 24516421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 24517717 - 24517650
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  24517717 gtcccttaacttattttattttctcagtttaatcccttaatttttaagtgtgtcaatttggtcccata 24517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 243 - 374
Target Start/End: Original strand, 40109375 - 40109506
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||  |||||   ||||||||  | | ||  | ||     
T  40109375 tcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatcttcatccgtttactaatgtggtcctttct 40109474  T
Q  343 gttagtttttaacattaaatgtttaaggtgaa 374  Q
    ||||||||||||  |||||||| |||||||||    
T  40109475 gttagtttttaatcttaaatgtctaaggtgaa 40109506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 242 - 399
Target Start/End: Original strand, 8092611 - 8092768
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||||||||||||| |  |||||||| |||||| ||| |||||||||| |||||  |||||   ||||||||| ||| ||  | ||    
T  8092611 gtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtatcaatttggttccataaatcttcctccgtttactgatttggtcctttc 8092710  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    ||||||| |||||| |||||| | ||||||||||||  || | |||||||| ||||||    
T  8092711 cgttagtatttaaccttaaatatctaaggtgaaccaactttataggtggtccaccata 8092768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 14765197 - 14765130
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  14765197 gtcctttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccata 14765130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 26803319 - 26803260
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttg 301  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  26803319 gtcccttaacttattttattttctcagtttgatctcttaactattaagtgtgtcaatttg 26803260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 444
Target Start/End: Original strand, 9633884 - 9633990
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||  ||||| ||||  |||  || || ||| |||||||||    
T  9633884 tctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaatttttaaattttgaccctttgatttt 9633983  T
Q  438 ttcttta 444  Q
    |||||||    
T  9633984 ttcttta 9633990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 350
Target Start/End: Original strand, 19464619 - 19464721
Alignment:
Q  248 taacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttag 347  Q
    |||||||||||||||| |||||||| |||||||||||| || ||| |||||||||| ||| |  ||||||| |||||||| |||| || |||||| ||||    
T  19464619 taacttattttattttttcagtttggtcccttaattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcatctccattag 19464718  T
Q  348 ttt 350  Q
    |||    
T  19464719 ttt 19464721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 242 - 392
Target Start/End: Original strand, 44977234 - 44977384
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| | ||  ||||||| || |||||||| ||||  ||  ||| || |||||    
T  44977234 gtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaaactggtcccttatgtcttctgccgttacctcatttggtcatctc 44977333  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtc 392  Q
     ||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  44977334 tgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtc 44977384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 246 - 377
Target Start/End: Original strand, 26801960 - 26802091
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    |||| ||||||||||||| ||||||||||||||||| |||||| ||||| ||||| ||| |||| ||||||   ||||||||  | | ||  | || |||    
T  26801960 cttagcttattttattttttcagtttgatcccttaactattaagtgtgtaaatttagtctcataagtcttcctccgtttactaatatggtcctttctgtt 26802059  T
Q  346 agtttttaacattaaatgtttaaggtgaacca 377  Q
    | |||||||  |||||||| ||||||||||||    
T  26802060 actttttaatcttaaatgtctaaggtgaacca 26802091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 38280863 - 38280930
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    |||| |||| ||||||||||||||||||||| ||| |||| |||||| ||||||||||||||| ||||    
T  38280863 gtcctttaagttattttattttctcagtttggtccattaactattaattgtgtcaatttggtcacata 38280930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 14171347 - 14171281
Alignment:
Q  266 cagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    |||||||||||||||||||| |||||| ||||||||||||||||  || |||||| |||||| ||||    
T  14171347 cagtttgatcccttaattataaaatgtttcaatttggtcccataaatcatctgtcatttactatttt 14171281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 21246578 - 21246516
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||| || |||||| ||||    
T  21246578 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaattcggtc 21246516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 43808624 - 43808562
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||||||||||||||||| ||||||||| || |||||||| ||||||| || |||||||||||    
T  43808624 gtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtc 43808562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 45042622 - 45042684
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||| |||| |||||||||||||||||||||||||||||| | |||||||| |||| ||||||    
T  45042622 gtcctttaatttattttattttctcagtttgatcccttaactgttaaatgtttcaaattggtc 45042684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 243 - 352
Target Start/End: Original strand, 13641271 - 13641380
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||   || ||| |||| |||| ||| ||| || ||| ||||||||||||||||  ||||||| |||||||| |||| || ||||||    
T  13641271 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctcc 13641370  T
Q  343 gttagttttt 352  Q
    |||| |||||    
T  13641371 gttatttttt 13641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 399
Target Start/End: Original strand, 21277059 - 21277164
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||||||||||||||  ||||||| |||||||| ||||  |  ||||| ||||||||| || |||||||| ||||||||||||  || | ||||||||     
T  21277059 tcaatttggtcccataaatcttctgccgtttactattttgatcctctccattagtttttgaccttaaatgtctaaggtgaaccaactttataggtggtcc 21277158  T
Q  394 accata 399  Q
    ||||||    
T  21277159 accata 21277164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 294 - 447
Target Start/End: Complemental strand, 23082177 - 23082024
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||||||||||| ||  | ||||||||||  || |||| ||  | |||||||||||||||||  |||| | ||| |||||||||||| ||||||||||     
T  23082177 tcaatttggtcccttatattttctgtcgttgcctcttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtcc 23082078  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaa 447  Q
    |||||   ||||| ||||  |||| || |||||  ||||||||||| |||||||    
T  23082077 accatggaccttaataaattttttaattttaacattttgattttttttttaaaa 23082024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 38283842 - 38283757
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttact 327  Q
    |||||||||||||||||||||| |||||||  |||  ||  |||||| |||||||||||||||| |||  |||||| |||||||||    
T  38283842 gtcccttaacttattttattttttcagtttagtcctctatctattaagtgtgtcaatttggtcctatatatcttctttcgtttact 38283757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 40812714 - 40812653
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggt 303  Q
    |||||||||||||||||||||||  |||||| |||||||| |||||| ||| ||||||||||    
T  40812714 gtcccttaacttattttattttcctagtttggtcccttaactattaagtgtctcaatttggt 40812653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 22169323 - 22169283
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaa 281  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  22169323 agtcccttaacttattttaatttctcagtttgatcccttaa 22169283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 30743100 - 30743163
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||| ||||||||||||| ||||||| | || |||||||| |||||||||| ||||||||||||    
T  30743100 gtcctttaacttattttaatttctcaatgtggtcccttaactattaaatgtttcaatttggtcc 30743163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 43807448 - 43807511
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||| ||||||||||||| |||||||||||  ||| |||| |||||||||| ||||||||||||    
T  43807448 gtcctttaacttattttaatttctcagtttagtccattaactattaaatgtttcaatttggtcc 43807511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 364
Target Start/End: Complemental strand, 13930778 - 13930656
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||  ||| ||| || ||| |||||||||||||||| ||||| ||||||||||  |||| ||  | ||    
T  13930778 gtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggtcctttc 13930679  T
Q  342 cgttagtttttaacattaaatgt 364  Q
    |||| ||||||||| ||||||||    
T  13930678 cgtttgtttttaaccttaaatgt 13930656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 14071254 - 14071184
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgt 364  Q
    |||||||||||||||| ||||||||||||||||  |||| ||  | |||||| ||||||||| ||||||||    
T  14071254 tcaatttggtcccataagtcttctgtcgtttaccattttggtcctttccgtttgtttttaaccttaaatgt 14071184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 448
Target Start/End: Complemental strand, 22766871 - 22766717
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    |||||||| |||| || || ||||||||||  || |||| ||  | |||||||||||||||||  |||| | ||| |||||||||||| ||||||||||     
T  22766871 tcaatttgatcccttatgttttctgtcgttgcctcttttggtcctttccgttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtcc 22766772  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaa 448  Q
    |||||   ||||  ||||  |||| || |||||| ||||||||||| ||| ||||    
T  22766771 accatggaccttcataaattttttaattttaaccttttgatttttttttttaaaa 22766717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 348
Target Start/End: Original strand, 47410997 - 47411103
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||| |||||||   || ||| ||||||||| ||| ||| || ||| ||||||||||| ||||  |||| ||||||||||| |||| || |||||    
T  47410997 gtcccttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgtttactattttggtcatctc 47411096  T
Q  342 cgttagt 348  Q
    |||||||    
T  47411097 cgttagt 47411103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 3979416 - 3979311
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| |||||||| ||| || ||| ||||||||||||||||  ||||||| |||||||| |||| ||  ||||    
T  3979416 gtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctc 3979317  T
Q  342 cgttag 347  Q
    ||||||    
T  3979316 cgttag 3979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 45570332 - 45570407
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctg 318  Q
    |||||||||||||||||||||| |||||||| | |||||| ||| |||||| |||| |||||| ||||  |||||||    
T  45570332 gtcccttaacttattttatttt-tcagtttggttccttaactatcaaatgtctcaacttggtctcataactcttctg 45570407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 377
Target Start/End: Complemental strand, 2973110 - 2972976
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||||||||||| | || ||| |||  |||||||||||| || ||| |||||||||||| ||| |||||    ||||||||  | | ||  | ||     
T  2973110 tcccttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataagtcttaccccgtttactagtgtggtcctttct 2973011  T
Q  343 gttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||||||||||| |||||||| ||||||| ||||    
T  2973010 gttagtttttaactttaaatgtctaaggtgtacca 2972976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 48332730 - 48332791
Alignment:
Q  244 cccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||| | |||||| ||   |||||||| |||||||||| ||||||||||||    
T  48332730 cccttaacttattttttcttctcacttcagtcccttaactattaaatgtttcaatttggtcc 48332791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 2238081 - 2237973
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| |||| ||| ||| || ||| ||||||||||||| || |||||||||||||  || |||| ||  ||||    
T  2238081 gtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctc 2237982  T
Q  342 cgttagttt 350  Q
    |||||||||    
T  2237981 cgttagttt 2237973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 346
Target Start/End: Original strand, 3978057 - 3978161
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| ||| |||| ||| || ||| |||||||| |||||||  |||||||||||||||| |||| ||  ||||    
T  3978057 gtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctc 3978156  T
Q  342 cgtta 346  Q
    |||||    
T  3978157 cgtta 3978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 14390271 - 14390379
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| |  | ||| |||| |||  ||| ||| |||||| |||||||||| |||||  |||||| ||||||||  |||| ||  ||||    
T  14390271 gtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgtttaccattttggtcctctc 14390370  T
Q  342 cgttagttt 350  Q
    |||||||||    
T  14390371 cgttagttt 14390379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 24502097 - 24502025
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  ||||||||| ||||||| | |||||| ||   |||||||| | |||||||||||||||||||||    
T  24502097 catccccaggtcccttaatttattttttcttctcacttcattcccttaacttttaaatgtgtcaatttggtcc 24502025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 35684262 - 35684198
Alignment:
Q  286 taaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttt 350  Q
    ||||||| ||||||||||||| || |||||||||||||  || |||| ||  |||||||||||||    
T  35684262 taaatgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttagttt 35684198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 48935213 - 48935105
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| |||| ||| ||| || ||| ||||||||||||| || |||||||| ||||  || |||| || |||||    
T  48935213 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctc 48935114  T
Q  342 cgttagttt 350  Q
    |||||||||    
T  48935113 cgttagttt 48935105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 290; Significance: 1e-162; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 246 - 659
Target Start/End: Complemental strand, 38419116 - 38418703
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||| |||||||| |||||||||||||||| |||||||||    
T  38419116 cttaacttattttattttctcagtttaattccttaattattaagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgtt 38419017  T
Q  346 agtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctttaa 445  Q
    |||||||||||||||| ||||||| ||||||||||| | |||||||| ||||||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  38419016 agtttttaacattaaacgtttaagatgaaccatatttataggtggtccaccatatgccttactaaatttttttattttaaccatttgattttttctttaa 38418917  T
Q  446 aaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatcatcttcaac 545  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||| |||||||||| |||||||||||    
T  38418916 aaaatagctgttaaatcatgtagggtctattgtactttactatgaaccactaacacctaagttaatccattcatcttcttcttccctcgtcatcttcaac 38418817  T
Q  546 aacaacttcatcgataaactccaaaaaatcccaaaaataataattaaacctactatttaataaccatgcaaccatcgtcatcttcatctatcatcatcaa 645  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||||| |||||||||| ||  ||| ||||||||||||||||||||||||||||    
T  38418816 aacaacttcatcaataaactccagaaaatcccaaaaatactaattaaacctattatttaataatcacacaatcatcgtcatcttcatctatcatcatcaa 38418717  T
Q  646 catcattcttccta 659  Q
    |||| || ||||||    
T  38418716 catccttgttccta 38418703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 240 - 536
Target Start/End: Original strand, 43894116 - 43894412
Alignment:
Q  240 tagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatc 339  Q
    |||||||||||||||||||   || |||||||| |||| ||| ||| |||||| ||||||||||| ||||  | || |   |||  || |||| || ||     
T  43894116 tagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataactatttttctgttacctcttttggtcata 43894215  T
Q  340 tccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttttt 439  Q
    |||||| ||||||||||| |||||| | |||||||||||||| |||| ||||| || ||||||| || ||||  |||| |||||||||||||||||||||    
T  43894216 tccgttggtttttaacatcaaatgtctgaggtgaaccatatttaaagatggtccacaatatgccctattaaattttttaatcttaaccatttgatttttt 43894315  T
Q  440 ctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc 536  Q
    |||||||| |  |||||| |||  |||||||||||||| |||||| ||| |||||||||||  |||   | |||||||||||| |||||||||||||    
T  43894316 ctttaaaagagggctgttgaattttgtagggtctattgtactttagtgtcaaccactaacatctaataaaatccattcatcttcttcttccctcatc 43894412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 338 - 647
Target Start/End: Complemental strand, 2293532 - 2293206
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattt- 436  Q
    ||||||||||||||||| || |||||| | | ||||| |||||| |||| ||||| ||||||||||||| ||||  |||| || |||||||||||||||     
T  2293532 tctccgttagtttttaaaatcaaatgtctgaagtgaatcatatttaaagatggtccaccatatgccttattaaattttttaattttaaccatttgattta 2293433  T
Q  437 tttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc 536  Q
    |||| |||||| |   | ||| |||||||| |||||||||| |||||||||||||||||| |||| |||   | || ||||||||| ||||||| |||||    
T  2293432 tttcattaaaagaggaccgttgaatcatgtggggtctattgtactttactgtgaaccactcacacctaataaaatcgattcatcttcttcttccgtcatc 2293333  T
Q  537 --------atcttcaacaacaacttcatcgataaactccaaaaaatcc--caaaaat---aataattaaacctactatttaataaccatgcaaccatc-- 621  Q
            ||||||||||||||||||||| ||||| ||||||||||||  |||||||   ||||||||  |||||| |||||| | ||  ||||||||      
T  2293332 tcttcatgatcttcaacaacaacttcatcaataaaatccaaaaaatcccacaaaaataaaaataattattcctactctttaatcatcacacaaccatcat 2293233  T
Q  622 -gtcatcttcatctatcatcatcaaca 647  Q
     ||||||||||||||||||||| ||||    
T  2293232 tgtcatcttcatctatcatcataaaca 2293206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 242 - 447
Target Start/End: Complemental strand, 39592392 - 39592187
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||||| || ||| |||  |||| ||| ||| || ||| |||| |||||||  || |||||||||||||||||||||| ||| ||||    
T  39592392 gtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggttctctc 39592293  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    ||||| |||||||||| |||||| |||||||| |||| || |||||||||| | ||||| ||||| ||||  |||  || |||||| |||||||||||||    
T  39592292 cgttaatttttaacatcaaatgtctaaggtgagccatgtttaaaggtggtccatcatataccttattaaatttttaaattttaaccttttgattttttct 39592193  T
Q  442 ttaaaa 447  Q
     |||||    
T  39592192 ataaaa 39592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 34439764 - 34439654
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatct 340  Q
    ||||||||||||||||||||||||||||| || |||||||| ||| |||||| ||||||||||||||||  ||||||| |||||||| |||| || ||||    
T  34439764 agtcccttaacttattttattttctcagtgtggtcccttaactataaaatgtttcaatttggtcccataaatcttctgccgtttactattttggtcatct 34439665  T
Q  341 ccgttagtttt 351  Q
    |||||||||||    
T  34439664 ccgttagtttt 34439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 246 - 377
Target Start/End: Original strand, 17319059 - 17319190
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    |||||||||||||| ||||||||||||||| ||||| ||| || ||| |||||||||| |||||  ||||||| |||||||| |||| ||  || |||||    
T  17319059 cttaacttattttaatttctcagtttgatctcttaactataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtcttcaccgtt 17319158  T
Q  346 agtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||||| |||||||| ||||||||||||    
T  17319159 agtttttaaccttaaatgtctaaggtgaacca 17319190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 50531859 - 50531753
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||  |||| ||||||||||| ||||||| || ||    
T  50531859 gtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttttgtcgtttactattttagtcatttc 50531760  T
Q  342 cgttagt 348  Q
     ||||||    
T  50531759 tgttagt 50531753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 41348243 - 41348326
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttc 316  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  41348243 catcccctggtcctttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttgatcccataagtcttc 41348326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 34438423 - 34438541
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    ||||||||||||||||||||||||||  |||||||| ||| || ||| ||||||||||||||||  ||||||| |||||||| |||| ||| |||| |||    
T  34438423 cttaacttattttattttctcagtttagtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctctgtt 34438522  T
Q  346 agtttttaacattaaatgt 364  Q
    |||||||||| | ||||||    
T  34438523 agtttttaacctcaaatgt 34438541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 287 - 501
Target Start/End: Original strand, 35787854 - 35788068
Alignment:
Q  287 aaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaag 386  Q
    |||||| ||||||||||||||||  ||||||||||||||| ||||| ||  |||||||||||||||||||| |||||| |||||| || ||| || ||||    
T  35787854 aaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgttagtttttaacatcaaatgtctaaggtaaatcatgtttaaag 35787953  T
Q  387 gtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttact 486  Q
    |||||| ||||||  | ||| ||||  |||  || |||||| ||| | |||||| |||||| ||   ||||  |||||| ||||||||||||| |||| |    
T  35787954 gtggtccaccatagactttattaaatttttaaattttaaccttttaaatttttcattaaaagatgattgttggatcatgcagggtctattgcattttatt 35788053  T
Q  487 gtgaaccactaacac 501  Q
    || || ||| |||||    
T  35788054 gtaaatcaccaacac 35788068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 348
Target Start/End: Original strand, 38417566 - 38417672
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||  |||| ||||||||||| |||  ||  ||||    
T  38417566 gtcctttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctc 38417665  T
Q  342 cgttagt 348  Q
    |||||||    
T  38417666 cgttagt 38417672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 243 - 377
Target Start/End: Original strand, 50530517 - 50530651
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||| ||| ||||  ||||||||||  |||||| ||||||||| |||| || || ||     
T  50530517 tcccttaacttattttattttctcagtttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttct 50530616  T
Q  343 gttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||| |||||||| ||||| || ||||||||||||    
T  50530617 gttaatttttaaccttaaaagtctaaggtgaacca 50530651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 243 - 348
Target Start/End: Original strand, 6139011 - 6139116
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||  |||| ||| ||||| | |||| || |||||     
T  6139011 tcccttaacttattttattttctcagtttggtcccttaattattaaatgtctcaatttggtctcataactcttatgttgtttattattttggtcatctct 6139110  T
Q  343 gttagt 348  Q
    ||||||    
T  6139111 gttagt 6139116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 86868 - 86966
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtc 392  Q
    ||||||||||||||||  | ||||| ||||||||||||| ||  |||||||||||||||||||| |||||| ||||||||||||| || ||||||||||    
T  86868 tcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtc 86966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 311 - 497
Target Start/End: Complemental strand, 29688012 - 29687826
Alignment:
Q  311 gtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaa 410  Q
    ||||| |||||||  || |||| || |||||| |||||||||||||| |||||| || || |||||||||| |||||||||| ||| ||  ||||| |||    
T  29688012 gtcttttgtcgttacctcttttggtcatctcctttagtttttaacatcaaatgtctacggcgaaccatatttaaaggtggtccaccgtaaaccttattaa 29687913  T
Q  411 aaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccacta 497  Q
    |  |||   | |||||||||||||||||||||||||| | |  ||||  |||||||| ||||||||| | |||| ||||||||||||    
T  29687912 atttttaagttttaaccatttgattttttctttaaaagagaattgttggatcatgtaaggtctattgtattttattgtgaaccacta 29687826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 338 - 491
Target Start/End: Complemental strand, 36604848 - 36604694
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaattttt-atcttaaccatttgattt 436  Q
    ||||||||||||||||| || |||| | |||| ||||||||||||||| |||| | ||||||||||||| |||   ||||| || |||||||||||||||    
T  36604848 tctccgttagtttttaatatcaaatatctaagatgaaccatattaaaaagtggcccaccatatgccttattaattttttttaattttaaccatttgattt 36604749  T
Q  437 tttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaa 491  Q
    ||||||||||| |   |  || |||||||| |||||||||  |||||||||||||    
T  36604748 tttctttaaaagaggaccattgaatcatgtggggtctattatactttactgtgaa 36604694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 242 - 354
Target Start/End: Original strand, 44159098 - 44159210
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||| ||||||||||||||||| ||||||||||| ||||| |||||| ||| |||||||||| ||| |  ||||||| |||||| | |||| || |||||    
T  44159098 gtcctttaacttattttattttttcagtttgatctcttaactattaagtgtttcaatttggttccacaactcttctgccgtttattattttggtcatctc 44159197  T
Q  342 cgttagtttttaa 354  Q
    |||||||||||||    
T  44159198 cgttagtttttaa 44159210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 41349628 - 41349561
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| |||||||    
T  41349628 gtcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttgatcccata 41349561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 242 - 448
Target Start/End: Complemental strand, 26393230 - 26393024
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || | | |||||||| |||| ||| || ||| ||||||||||||||||  |||||||||||||||  |||| |  |  ||    
T  26393230 gtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtcgtttaccattttggacacttc 26393131  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||  |||||||||| ||||||| ||||||||||||   | | |||||||| ||||||  |||||||||   |||| || ||||||||||||| ||||      
T  26393130 cgtctgtttttaacactaaatgtctaaggtgaaccaacattataggtggtccaccatagaccttactaagttttttaattttaaccatttgatattttag 26393031  T
Q  442 ttaaaaa 448  Q
    |||||||    
T  26393030 ttaaaaa 26393024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 43419478 - 43419343
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagt-tatct 340  Q
    ||||||||||||||||||||||||||||||  |||||||| ||| || ||| ||||||||||||| ||  ||||||| ||||  || |||| || ||| |    
T  43419478 gtcccttaacttattttattttctcagtttcgtcccttaactataaagtgtctcaatttggtcccttaactcttctgccgttacctattttggtctat-t 43419380  T
Q  341 ccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
     ||||||||||||||  ||||||| ||||||||||||    
T  43419379 tcgttagtttttaaccataaatgtataaggtgaacca 43419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 11482809 - 11482872
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||||    
T  11482809 gtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcc 11482872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 374
Target Start/End: Original strand, 17494145 - 17494272
Alignment:
Q  247 ttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtta 346  Q
    |||| |||||||| ||||||| |||| |||||||| |||||| ||| | ||||||||| | || ||||| || |||||||| | || |||||||||||||    
T  17494145 ttaatttattttaatttctcattttggtcccttaactattaagtgttttaatttggtctcttatgtcttatgccgtttactatattggttatctccgtta 17494244  T
Q  347 gtttttaacattaaatgtttaaggtgaa 374  Q
     |||||||| |||||||| ||| |||||    
T  17494245 ctttttaaccttaaatgtctaacgtgaa 17494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 6140411 - 6140328
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||||| |||||  |||||||||||||||| |||| || || |||||||||||||||| |||||| | ||||||||||||    
T  6140411 tcaatttggttccataactcttctgtcgtttactattttggtcatttccgttagtttttaaccttaaatatctaaggtgaacca 6140328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 11115083 - 11114948
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || | | ||||||||||||||||  |||||||||||||||  |||| |   ||||    
T  11115083 gtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcgtttaccattttggacctctc 11114984  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||||||||| |||||||| |||| |||||||    
T  11114983 cgttagtttttaaccttaaatgtctaagctgaacca 11114948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 47242965 - 47243027
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||| | |||||||||    
T  47242965 gtcccttaacttattttaatttctcagtttaatcccttaactattaaatgttttaatttggtc 47243027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 44302829 - 44302938
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||||||||||||||||| |  |||||||||| ||||| |||||||||  ||||||  || || ||||  |||| || ||||||||||||||      
T  44302829 tctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgattga 44302928  T
Q  438 ttctttaaaa 447  Q
    ||||||||||    
T  44302929 ttctttaaaa 44302938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 5417317 - 5417376
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttg 301  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||||| ||||||||    
T  5417317 gtcccttaacttattttaatttttcagtttggtcccttaactattaaatgtttcaatttg 5417376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 501
Target Start/End: Original strand, 11094593 - 11094796
Alignment:
Q  296 aatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaac 395  Q
    |||||||||| |||  | ||||| ||||||||||||| ||  ||| |||||||||||||||| |||||| ||||||  ||||| || ||| |||||  ||    
T  11094593 aatttggtcctataaattttctgccgtttactgttttggtcctcttcgttagtttttaacatcaaatgtctaaggt--accatgtttaaatgtggttcac 11094690  T
Q  396 catatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccac 495  Q
    ||||  ||||| ||||  |||  || |||||| | ||||||||||||||||| |    ||||  |||||||| ||||||||| | |||| ||| ||||||    
T  11094691 catagaccttattaaatttttaaatattaaccttgtgattttttctttaaaagaggattgttggatcatgtaaggtctattgtattttattgtaaaccac 11094790  T
Q  496 taacac 501  Q
     |||||    
T  11094791 caacac 11094796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 305
Target Start/End: Original strand, 47572600 - 47572662
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||| |||||||| ||  |||||||| |||||||||| ||||||||||||    
T  47572600 tcccttaacttattttaatttctcagcttagtcccttaactattaaatgtttcaatttggtcc 47572662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 50498075 - 50498013
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    ||||||| |||||||||| ||||||||| || |||||||||||||||| || |||||||||||    
T  50498075 gtcccttcacttattttaatttctcagtgtggtcccttaattattaaacgtttcaatttggtc 50498013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 375
Target Start/End: Complemental strand, 6616314 - 6616181
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| |||| |||||||| ||  | |||||||||||| |||||| ||  ||||    
T  6616314 gtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtttattgttttggtcctctc 6616215  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaac 375  Q
    | |||||||||||||| ||||||  |||||||||    
T  6616214 ctttagtttttaacatcaaatgtcaaaggtgaac 6616181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 243 - 448
Target Start/End: Original strand, 29663657 - 29663861
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||| |||||||   || ||| |||||||||| || ||| || ||| ||||||||||||||||  ||||||| |||||||  ||||  |  | |||    
T  29663657 tcccttaatttatttttggttttcattttgatccct-aactataaattgtctcaatttggtcccataactcttctgccgtttaccattttgatcttttcc 29663755  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
    |||   |||||||||||||||| ||||||||||||   | | |||||||| ||||||  ||||||||| | |||| || ||||||| ||||| ||||  |    
T  29663756 gtttaattttaacattaaatgtctaaggtgaaccaacattataggtggtccaccataaaccttactaagatttttaattttaaccacttgatattttagt 29663855  T
Q  443 taaaaa 448  Q
    ||||||    
T  29663856 taaaaa 29663861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 375
Target Start/End: Complemental strand, 30683130 - 30682997
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||| |||||||   || ||| |||| |||||||| ||| || ||| ||||||||||||||||  ||||| | |||| | | |||| ||  ||||    
T  30683130 gtcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggccgttaattcttttggtcttctc 30683031  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaac 375  Q
    ||||||||||||||| ||||| |||||| |||||    
T  30683030 cgttagtttttaacaataaatatttaagatgaac 30682997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 33376268 - 33376341
Alignment:
Q  279 taattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttttt 352  Q
    ||||||| || ||| ||||||||||||||||  |||||||||||||||| |||||||  ||||||||| |||||    
T  33376268 taattataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttagtcctctccgttaattttt 33376341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 43418037 - 43418106
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttgg 302  Q
    ||||||| ||||| |||| ||||||||||||||||||||| |||||||| ||| || ||| |||||||||    
T  43418037 catcccccagtcctttaaattattttattttctcagtttggtcccttaactataaagtgtttcaatttgg 43418106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 26045136 - 26045208
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  |||||||||||||||||| ||||||||| || |||||||| ||||||| || ||||||| ||||    
T  26045136 catcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttagtcc 26045208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 377
Target Start/End: Original strand, 38370347 - 38370431
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacatt-aaatgtttaaggtgaacca 377  Q
    ||||||||||| ||||  |||||||||||||||  |||| || ||||||||||||||||||| || |||||  ||||||||||||    
T  38370347 tcaatttggtctcataactcttctgtcgtttaccattttggtcatctccgttagtttttaaccttaaaatgactaaggtgaacca 38370431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 43708840 - 43708912
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  ||| |||||||||||||| |||||||||||  ||| |||| |||||||||| ||||||||||||    
T  43708840 catcccccggtctcttaacttattttaatttctcagtttagtccattaactattaaatgtttcaatttggtcc 43708912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 47573756 - 47573684
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  |||||||||||||||||| ||||||||| || |||||||| ||||||| || | ||||||||||    
T  47573756 catcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgttttaatttggtcc 47573684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 505
Target Start/End: Complemental strand, 47668700 - 47668444
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||| |||||||||||| | || ||| |||| |||| ||| ||| || ||| |||| |||||||| ||  || |||| |||||| |||||| ||  ||||    
T  47668700 gtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgtttattgttttggtcctctc 47668601  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttga-ttttttc 440  Q
     ||||||||||||||| |||| | |||||| ||||||  | |||| ||||| ||||||  ||||        |||  || |||||| ||||| |||||||    
T  47668600 tgttagtttttaacatcaaatatctaaggtaaaccatggttaaagatggtccaccatagacctt--------tttaaattttaaccttttgatttttttc 47668509  T
Q  441 tttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaa 505  Q
    ||||||| |    ||||  |||||||||||||||||| | |||| ||||||||||||||| ||||    
T  47668508 tttaaaagaggattgttcgatcatgtagggtctattgtattttagtgtgaaccactaacatttaa 47668444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 296 - 439
Target Start/End: Original strand, 56296260 - 56296403
Alignment:
Q  296 aatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaac 395  Q
    ||||||||||||||  |||| ||||||||||  |||| || || |||||| |||||||||  ||||||| ||||||| ||||   | | |||||||| ||    
T  56296260 aatttggtcccataattcttttgtcgtttaccattttggtaatttccgtttgtttttaaccctaaatgtctaaggtggaccaacatcataggtggtctac 56296359  T
Q  396 catatgccttactaaaaatttttatcttaaccatttgatttttt 439  Q
    ||||  |||||||||   |||| || ||||||||||||| ||||    
T  56296360 catagaccttactaagttttttaattttaaccatttgatatttt 56296403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 33377467 - 33377361
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| ||||||||||||||||  ||||||| |||||||| |||| ||  ||||    
T  33377467 gtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcctctc 33377368  T
Q  342 cgttagt 348  Q
    |||||||    
T  33377367 cgttagt 33377361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 43709977 - 43709915
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||||||||||||||||| ||||||||| |  |||||||| ||||||| || |||||||||||    
T  43709977 gtcccttaacttattttaatttctcagtgtagtcccttaactattaaacgtttcaatttggtc 43709915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 44160513 - 44160475
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatccctta 280  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  44160513 gtcccttaacttattttattttctcagtttggtccctta 44160475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 448
Target Start/End: Original strand, 56000301 - 56000506
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||   || ||| ||||||||| ||| ||| || ||| ||||||| |||| |||  ||||||| |||||||  |||| ||  | |||    
T  56000301 tcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgtttaccattttggtcttttcc 56000400  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
     | ||||||||||| ||||||| ||||||| ||||   | | |||||||| ||| ||  |||||||||   |||| || ||||||||||||| ||||  |    
T  56000401 atcagtttttaacactaaatgtctaaggtggaccaacattataggtggtccaccgtagaccttactaagttttttaattttaaccatttgatattttgat 56000500  T
Q  443 taaaaa 448  Q
    ||||||    
T  56000501 taaaaa 56000506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 50497007 - 50497071
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||| ||||||||||| |||||||||||  | |||||| |||||||||| | ||||||||||    
T  50497007 agtccctcaacttattttaatttctcagtttagttccttaactattaaatgttttaatttggtcc 50497071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 352
Target Start/End: Complemental strand, 38371904 - 38371798
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    ||||||||||||| | || ||||||||||||| ||| ||  ||| || |||| ||| |||| || ||||| |||||||  || ||||||||||||| | |    
T  38371904 cttaacttattttctgttttcagtttgatcccctaactaaaaaacgtctcaaattgatcccttatgtcttttgtcgttacctattttagttatctctgat 38371805  T
Q  346 agttttt 352  Q
    |||||||    
T  38371804 agttttt 38371798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 47244092 - 47244030
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||| |||||||| ||||||||| || |||||||| |||||||  | ||||||||||||    
T  47244092 tcccttaatttattttaatttctcagtgtggtcccttaactattaaacatttcaatttggtcc 47244030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 48413653 - 48413591
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||| |||| |||| || | |||||| ||||||| || ||||||||||||    
T  48413653 tcccttaacttattttaatttcccagtgtggttccttaactattaaacgtttcaatttggtcc 48413591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 352
Target Start/End: Original strand, 52658924 - 52659034
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| |||| |||| ||| ||| |||||| |||||||||| | |||  ||||||| |||||||   |||||| || ||    
T  52658924 gtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccgtttaccagtttagtcatttc 52659023  T
Q  342 cgttagttttt 352  Q
    |||| ||||||    
T  52659024 cgtttgttttt 52659034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 21104410 - 21104329
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttac 326  Q
    |||||| ||||||| | || ||| |||| |||| ||| ||| || ||| ||||||||||| |||| ||||||||||||||||    
T  21104410 ccttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtttac 21104329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 582
Target Start/End: Original strand, 43894433 - 43894478
Alignment:
Q  537 atcttcaacaacaacttcatcgataaactccaaaaaatcccaaaaa 582  Q
    ||||||||||||||||||||| ||||| |||| ||||| |||||||    
T  43894433 atcttcaacaacaacttcatccataaaatccagaaaattccaaaaa 43894478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 346
Target Start/End: Original strand, 5687220 - 5687292
Alignment:
Q  274 tcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtta 346  Q
    |||||||| ||| || ||| ||||||||||||||||  |||| || |||||||| |||| || ||||||||||    
T  5687220 tcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 326
Target Start/End: Complemental strand, 28103589 - 28103505
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttac 326  Q
    |||||||||||||||||    | ||| |||| |||||||| ||| || ||| |||||||||||||||| | |||||| |||||||    
T  28103589 gtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctgccgtttac 28103505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 352
Target Start/End: Original strand, 29686267 - 29686379
Alignment:
Q  240 tagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatc 339  Q
    |||||||||||||||||||   || ||| |||| |||||||| ||| || ||| |||| |||||||| || ||||| |||||||  || |||| ||  ||    
T  29686267 tagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgttacctcttttggtcctc 29686366  T
Q  340 tccgttagttttt 352  Q
    ||||||| |||||    
T  29686367 tccgttaattttt 29686379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 29833385 - 29833493
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| |||| ||||||| |||||| ||||||||||||| ||  |||| |||||||  || |||| ||  ||||    
T  29833385 gtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcgttacctcttttggtcctctc 29833484  T
Q  342 cgttagttt 350  Q
    |||||||||    
T  29833485 cgttagttt 29833493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 243 - 659
Target Start/End: Original strand, 3532208 - 3532617
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||| |||||| ||||||| |||||     
T  3532208 tcccttaatttattttattttttcagtttgatcccttaattattaagtgtgtcaatttggtcacataagtcttttgtcatttactattttagtcatctct 3532307  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
    |||  |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  3532308 gttgatttttaacattaaatgtttaaggtgaaccatatttaaaggtggtccaccatatgcattactaaaaaattttattttaaccatttgattttttctt 3532407  T
Q  443 taaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatcatcttc 542  Q
    |||||||||| |||||||||||||||||||||||||||       |||||||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  3532408 taaaaaatagttgttaaatcatgtagggtctattgcac-------tgaaccactaacacctaagttaatccatttatctttttcttccctcatcatcttc 3532500  T
Q  543 aacaacaacttcatcgataaactccaaaaaatcccaaaaataataattaaacctactatttaataaccatgcaaccatcgtcatcttcatctatcatcat 642  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||||||| ||||||||    
T  3532501 aacaacaacttcatcaataaactccataaaatcccaaaaataataattaaacctactatttaataaccacacaaccattatcatcttcatcaatcatcat 3532600  T
Q  643 caacatcattcttccta 659  Q
    |||||||  ||||||||    
T  3532601 caacatccctcttccta 3532617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 338 - 536
Target Start/End: Original strand, 14714601 - 14714799
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||||||||||||| |||||| |||||||||||||||| |||||||||| |||||| |||||| |||   |||| ||   ||||||||||||||    
T  14714601 tctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatacgccttattaatttttttaattgcaaccatttgatttt 14714700  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc 536  Q
    |||||||||| ||  | ||| |||||||||| |||||||| | ||||||||||||||||||||| |||   | | |||||||||| |||||||||||||    
T  14714701 ttctttaaaagatgaccgttgaatcatgtagagtctattgtattttactgtgaaccactaacacctaataaaattcattcatcttcttcttccctcatc 14714799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 243 - 399
Target Start/End: Complemental strand, 7983797 - 7983641
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||||||||||||||| || |||||| |||||| |||||||||||||||| ||| |||||||  ||||||||||||||||  | | |    
T  7983797 tcccttaacttattttattttctcagtttaattccttaactattaagtgtgtcaatttggtcctataagtcttctaccgtttactgttttagtccttttc 7983698  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    || | |||||||||| |||||| ||||||||||||| || |||||||||| ||||||    
T  7983697 gtcaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 7983641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 338 - 533
Target Start/End: Original strand, 4512215 - 4512410
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    ||||| |||||||||||||| |||| | |||||||||||||||||||| |||||| ||||||||||||| |||   |||| || || |||||||||||||    
T  4512215 tctccattagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaatttttttaattttgaccatttgatttt 4512314  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctc 533  Q
    |||||||||| ||  | ||| |||||||| |||||||||  |||||||||||||||| | |||| |||   | || ||||||||| ||||||||||    
T  4512315 ttctttaaaagatgaccgttgaatcatgtggggtctattatactttactgtgaaccattcacacctaataaaatcaattcatcttcttcttccctc 4512410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 245 - 375
Target Start/End: Complemental strand, 7490295 - 7490165
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgt 344  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||  |||| | | ||||||| |||| ||  | |||||    
T  7490295 ccttaacttattttattttctcagtttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgt 7490196  T
Q  345 tagtttttaacattaaatgtttaaggtgaac 375  Q
    ||||||||||| |||||||| ||||||||||    
T  7490195 tagtttttaaccttaaatgtctaaggtgaac 7490165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 243 - 445
Target Start/End: Original strand, 14509223 - 14509425
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||||||||||| |||| |||||||| ||| || ||| | |||| |||||||||  |||||||||||||||| |||| ||  |||||    
T  14509223 tcccttaacttattttattttctcactttggtcccttaactataaagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctcc 14509322  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
    |||| |||||||| |||||||| |||||| |||||  || | |||||||| ||||||  ||||| ||||  ||||  | |||||| |||||| |||| ||    
T  14509323 gttaatttttaaccttaaatgtctaaggtaaaccaactttataggtggtccaccatagaccttattaaaccttttatttttaaccgtttgatattttttt 14509422  T
Q  443 taa 445  Q
    |||    
T  14509423 taa 14509425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 269 - 501
Target Start/End: Original strand, 12852926 - 12853158
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    |||| |||| ||| ||| || ||| ||||||||||||||||  |||||| ||||||||| |||| || ||||||||||| ||||||||| |||  | |||    
T  12852926 tttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcatctccgttagattttaacatcaaaaatctaa 12853025  T
Q  369 ggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtag 468  Q
    ||||||||||||| |||||||||  ||||||  || || ||||  |||  || ||||||||||||||| |||||||||| |   |  || ||| ||||||    
T  12853026 ggtgaaccatatttaaaggtggttcaccatagaccgtattaaatttttgaattttaaccatttgatttattctttaaaagaggaccattgaattatgtag 12853125  T
Q  469 ggtctattgcactttactgtgaaccactaacac 501  Q
     |||||||| ||||| |||| ||||||||||||    
T  12853126 agtctattgtactttcctgtcaaccactaacac 12853158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 25570973 - 25570798
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||||||||||||| |  |||||||| |||||| ||| |||||||| | ||||| ||||||   | |||||| |||||||  | ||    
T  25570973 gtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtttcaatttgattccataagtcttcctccatttactattttagtcctttc 25570874  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttt 417  Q
    |||||||||||||  |||||||| ||||||||||||  || | |||||||| ||||||  ||||| |||| |||||    
T  25570873 cgttagtttttaaacttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaatatttt 25570798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 294 - 501
Target Start/End: Original strand, 23177739 - 23177946
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||||||||||||||  ||||||| |||||||  |||| ||  |||||||||||||||||||| |||  | |||| ||||||||||| |||| ||||      
T  23177739 tcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttc 23177838  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaacc 493  Q
    ||| ||   |||| ||||  || | || |||||||||||||||||||||||||      | ||| ||| |||| |||||||||| |||||||||||||||    
T  23177839 accgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgcggaccgttgaattatgtcgggtctattgtactttactgtgaacc 23177938  T
Q  494 actaacac 501  Q
    ||||||||    
T  23177939 actaacac 23177946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 294 - 501
Target Start/End: Original strand, 23588996 - 23589203
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||||||||||||||  ||||||| |||||||  |||| ||  |||||||||||||||||||| |||  | |||| ||||||||||| |||| ||||      
T  23588996 tcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggttc 23589095  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaacc 493  Q
    ||| ||   |||| ||||  || | || |||||||||||||||||||||||||      | ||| ||| |||| |||||||||| |||||||||||||||    
T  23589096 accgtagatcttattaaattttctaattttaaccatttgattttttctttaaatgcggaccgttgaattatgtcgggtctattgtactttactgtgaacc 23589195  T
Q  494 actaacac 501  Q
    ||||||||    
T  23589196 actaacac 23589203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 243 - 369
Target Start/End: Original strand, 8537026 - 8537152
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||||||||| |||||||| | |||| ||  |||||| |||| |||||||| || || ||||||||||  || |||| || ||||||    
T  8537026 tcccttaacttattttattttcttagtttgattctttaactaaaaaatgtctcaaattggtcccttatgtattctgtcgttatctattttggtcatctcc 8537125  T
Q  343 gttagtttttaacattaaatgtttaag 369  Q
    ||||||||||||| |||||||| ||||    
T  8537126 gttagtttttaaccttaaatgtctaag 8537152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 368 - 501
Target Start/End: Complemental strand, 6708956 - 6708823
Alignment:
Q  368 aggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgta 467  Q
    |||||||||||||| |||||||||  ||||||  || || ||||  || | || ||||||||||||||| ||||||||||||   | ||| ||| |||||    
T  6708956 aggtgaaccatatttaaaggtggttcaccataaaccgtattaaattttctaattttaaccatttgatttattctttaaaaaaggaccgttgaattatgta 6708857  T
Q  468 gggtctattgcactttactgtgaaccactaacac 501  Q
    |||||||||||||||| |||||||||||||||||    
T  6708856 gggtctattgcactttcctgtgaaccactaacac 6708823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 294 - 501
Target Start/End: Complemental strand, 41296505 - 41296298
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||||||||||| || || || |||||||  || |||| ||  |||||||||||||||||||  |||||| ||| ||||| ||||||||||||||||      
T  41296505 tcaatttggtcccttatgttttttgtcgttatctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaatcatattaaaaggtggtgc 41296406  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaacc 493  Q
    |||||    |||| ||||  |||| || |||||| ||||||||||||||||||| |    ||||  |||||||||| ||||||| | |||| |||||| |    
T  41296405 accatggatcttagtaaattttttaatattaaccttttgattttttctttaaaagaggattgttcgatcatgtaggatctattgtattttagtgtgaatc 41296306  T
Q  494 actaacac 501  Q
    ||||||||    
T  41296305 actaacac 41296298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 338 - 439
Target Start/End: Original strand, 26205122 - 26205223
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||||||||||||| |||||| |||||||||||||| | ||| |||||| ||||||||||||| |||   |||  || ||||||||||||||||    
T  26205122 tctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgccttattaattttttaaattttaaccatttgatttt 26205221  T
Q  438 tt 439  Q
    ||    
T  26205222 tt 26205223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 242 - 346
Target Start/End: Complemental strand, 14510612 - 14510508
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||| ||||||||||||||||||| |||||  |||||||| |||||| ||| |||||||||||| |||  ||||||| |||||||| ||||||| ||||     
T  14510612 gtcctttaacttattttattttcttagtttagtcccttaactattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcatctt 14510513  T
Q  342 cgtta 346  Q
    |||||    
T  14510512 cgtta 14510508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 233 - 377
Target Start/End: Complemental strand, 15850771 - 15850627
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    |||||||  |||||||||||||||||||||||| |||||| ||| |||| ||| |||||| ||||||||||| ||||  |||||||  |||  || ||||    
T  15850771 catcccccggtcccttaacttattttattttcttagtttgctcctttaactataaaatgtttcaatttggtctcataactcttctgctgttacctatttt 15850672  T
Q  333 agttatctccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
     ||   || ||||||||||||||  ||||||| ||||||||||||    
T  15850671 ggtccacttcgttagtttttaaccctaaatgtctaaggtgaacca 15850627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 242 - 373
Target Start/End: Complemental strand, 37869143 - 37869012
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||||||| ||| || ||| ||||||| ||| |||| ||||||||||||||||  |||| ||  ||||    
T  37869143 gtcccttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtcttctc 37869044  T
Q  342 cgttagtttttaacattaaatgtttaaggtga 373  Q
    |||| ||||||||| |||||||| ||||||||    
T  37869043 cgtttgtttttaaccttaaatgtctaaggtga 37869012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 3533729 - 3533644
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttact 327  Q
    |||| ||||||||||||||||| | |||||| |||||||| |||||| ||||||||||||||| ||||  |||| |||||||||||    
T  3533729 gtcctttaacttattttatttttttagtttggtcccttaactattaagtgtgtcaatttggtctcataaatcttttgtcgtttact 3533644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 7982330 - 7982387
Alignment:
Q  247 ttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  7982330 ttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaatttggtc 7982387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 21010505 - 21010342
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||| ||||||| ||||||| |||||| ||| ||||||| |||| |||||||||| | ||||  ||||| ||||  |||  || |||||| ||| |||||    
T  21010505 tctctgttagttgttaacatcaaatgtctaatgtgaaccgtatttaaaggtggtctatcataaaccttattaaatttttaaattttaaccctttaatttt 21010406  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    ||||| |||| |||  ||||  |||| ||||||||||||| | |||| | ||||||||||||||    
T  21010405 ttcttaaaaagataattgttggatcaggtagggtctattgtattttattatgaaccactaacac 21010342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 242 - 376
Target Start/End: Original strand, 32614398 - 32614532
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||| ||||||||||||| ||| |||| |||| ||| ||| |  ||| ||||||| || |||||  |||| ||||||||||  |||||||  ||||    
T  32614398 gtcccttagcttattttattttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgtttaccattttagtcctctc 32614497  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacc 376  Q
    |||| ||||||||| ||| |||| |||||||||||    
T  32614498 cgtttgtttttaaccttatatgtctaaggtgaacc 32614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 477
Target Start/End: Original strand, 45047453 - 45047589
Alignment:
Q  340 tccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttttt 439  Q
    ||||||| ||||||| || |||||| |||||||||||||||| |||||||||| ||||| | ||||| |||||    |||| |||||| |||| ||||||    
T  45047453 tccgttaatttttaatatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatgtaccttagtaaaagaaattattttaaccctttg-tttttt 45047551  T
Q  440 ctttaaaaaatagctgttaaatcatgtagggtctattg 477  Q
    |||||||| ||   ||||  |||||||||| |||||||    
T  45047552 ctttaaaatattattgttggatcatgtaggatctattg 45047589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 377
Target Start/End: Original strand, 10367287 - 10367387
Alignment:
Q  277 cttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaacc 376  Q
    ||||| ||| || ||| ||||||| ||| |||| |||||||| |||||||  |||||||  |||||||| ||||||||| |||||||| |||||||||||    
T  10367287 cttaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttagtcgtctccgtttgtttttaaccttaaatgtctaaggtgaacc 10367386  T
Q  377 a 377  Q
    |    
T  10367387 a 10367387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 470 - 647
Target Start/End: Original strand, 14714901 - 14715093
Alignment:
Q  470 gtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc--------atcttcaacaacaacttcatcgata 561  Q
    |||||||| | ||||||||||||||||||||| |||   | | |||||||||| |||||||||||||        | ||||||||||||||||||| |||    
T  14714901 gtctattgtattttactgtgaaccactaacacctaataaaattcattcatcttcttcttccctcatcccttcatgaacttcaacaacaacttcatcaata 14715000  T
Q  562 aactccaaaaaatcccaaa--aataataat--taaacctactatttaataaccatgcaaccatc---gtcatcttcatctatcatcatcaaca 647  Q
    || |||||||||||| |||  |||||  ||  || || |||| |||||| ||||  ||||||||   |||||||| |||||||||||||||||    
T  14715001 aaatccaaaaaatcctaaatgaataaatattatacacatactctttaatcaccagacaaccatcattgtcatctttatctatcatcatcaaca 14715093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 20630774 - 20630711
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||| ||||||||||| ||||||||||| ||||||||| ||||||| || ||||||||||||    
T  20630774 gtccctaaacttattttaatttctcagtttaatcccttaactattaaacgtttcaatttggtcc 20630711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 25569773 - 25569856
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttc 316  Q
    |||||||  |||| ||||||||||||||||| | |||||| |||||||| |||||  ||||||||||||||| |||| ||||||    
T  25569773 catccccaggtcctttaacttattttatttttttagtttggtcccttaactattacttgtgtcaatttggtcacataagtcttc 25569856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 15850116 - 15850189
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtccc 306  Q
    |||||||  |||||||||||||||||||||| |||||||| || ||||| ||| || ||| |||||||||||||    
T  15850116 catcccccggtcccttaacttattttattttttcagtttggtctcttaactataaagtgtctcaatttggtccc 15850189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 374
Target Start/End: Original strand, 7037011 - 7037111
Alignment:
Q  274 tcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtga 373  Q
    |||||||| ||| || ||| |||||||||||||||| |||||||| |||||||  |||| || || ||||||  |||||||| |||||| | ||||||||    
T  7037011 tcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtttatttttaaccttaaatatctaaggtga 7037110  T
Q  374 a 374  Q
    |    
T  7037111 a 7037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 28109920 - 28109837
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||||||||||||||  | |||||| ||||||  |||| ||  ||||||||| |||||||| |||||||| ||||||||||||    
T  28109920 tcaatttggtcccataacttttctgtagtttaccattttggtcctctccgttattttttaaccttaaatgtctaaggtgaacca 28109837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 399
Target Start/End: Original strand, 4829481 - 4829635
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgt 344  Q
    ||||||||||||||   || ||| |||  |||||||| ||| |||||| |||||||| || ||||  |||| ||||||||||| |||| ||  |||| ||    
T  4829481 ccttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtcctctctgt 4829580  T
Q  345 tagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    |||| |||||| |||||| | |||||| |||||  || | |||||||| ||||||    
T  4829581 tagtgtttaaccttaaatatctaaggtaaaccaactttataggtggtccaccata 4829635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 30178558 - 30178620
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||||||||||||||||| |||||||| ||| |||||||| ||| |||||| ||| |||||||    
T  30178558 gtcccttaacttattttaatttctcagattggtcccttaactatcaaatgtttcagtttggtc 30178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 33553467 - 33553405
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||| ||| |||||||| || ||||| ||||||| || ||||||||||||    
T  33553467 tcccttaacttattttaatttttcagtttggtctcttaactattaaacgtttcaatttggtcc 33553405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 352
Target Start/End: Complemental strand, 40174815 - 40174757
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttttt 352  Q
    ||||||||||||||||  |||||||| ||||||| |||| || ||||||||||||||||    
T  40174815 tcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttt 40174757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 352
Target Start/End: Complemental strand, 21012174 - 21012073
Alignment:
Q  251 cttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttt 350  Q
    |||||||| | || ||| ||||||||| ||| ||| || ||| |||||||||||||  |  ||||| |||||||||| |||| || ||||||||||||||    
T  21012174 cttattttttgttttcattttgatcccctaactataaagtgtttcaatttggtccctcaaatcttccgtcgtttactattttggtcatctccgttagttt 21012075  T
Q  351 tt 352  Q
    ||    
T  21012074 tt 21012073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 30179653 - 30179593
Alignment:
Q  244 cccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    ||||||| |||||||| |||||||||||| |||||||||| ||||| || | |||||||||    
T  30179653 cccttaatttattttaatttctcagtttggtcccttaatttttaaacgttttaatttggtc 30179593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 281
Target Start/End: Complemental strand, 8538728 - 8538689
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaa 281  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  8538728 gtcccttaacttattttattttctcagtttggtctcttaa 8538689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 23178985 - 23178875
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| | || |||||||||||  ||||| |||||||| | |||| || |||||    
T  23178985 gtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggtcatctc 23178886  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  23178885 cgttagttttt 23178875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 23590242 - 23590132
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| | || |||||||||||  ||||| |||||||| | |||| || |||||    
T  23590242 gtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggtcatctc 23590143  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  23590142 cgttagttttt 23590132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 492
Target Start/End: Complemental strand, 3528266 - 3528117
Alignment:
Q  344 ttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttttt-ctt 442  Q
    ||||||||||| |  ||| || |||||||||||||||| |||||||||  ||||||  || || ||||  |||| || ||||||| |||||||||| |||    
T  3528266 ttagtttttaatagcaaaagtctaaggtgaaccatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccagttgattttttcctt 3528167  T
Q  443 taaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaac 492  Q
    ||||| |   |  || ||| ||||||||| ||||| | ||||||||||||    
T  3528166 taaaagaggaccattgaattatgtagggtgtattgtattttactgtgaac 3528117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 41796057 - 41795989
Alignment:
Q  240 tagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccat 308  Q
    |||||||||||||||||||   || ||| ||||||||| ||| ||| || ||| |||||||||||||||    
T  41796057 tagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcccat 41795989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 225; Significance: 1e-123; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 242 - 659
Target Start/End: Complemental strand, 35315325 - 35314920
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||  ||||    
T  35315325 gtcccttaacttattttattttctcagtttgatcccttaattattaagtatgtcaatttggtcccataagtcttctgtcgtttactgttttagtcctctc 35315226  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
     ||||||||||||||| |||||| |||               ||||||||| ||||||||||||||||||  ||||||| |||||||||| |||||||||    
T  35315225 tgttagtttttaacatcaaatgtctaa---------------aaggtggtccaccatatgccttactaaatttttttattttaaccattttattttttct 35315141  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatcatctt 541  Q
    |||||| |||  |||| ||||||||||||||| ||| |||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  35315140 ttaaaagataattgttgaatcatgtagggtcttttgtactttactgtgaactactaacacctaagttaatccattcatcttcttcttccctcatcatctt 35315041  T
Q  542 caacaacaacttcatcgataaactccaaaaaatcccaaaaataataattaaacctactatttaataaccatgcaaccatc---gtcatcttcatctatca 638  Q
     ||||||||||||||| ||||| || | ||||||||||||||||||||||||||||||||||||| ||||  ||||||||   ||||||||||||||| |    
T  35315040 gaacaacaacttcatcaataaaatctagaaaatcccaaaaataataattaaacctactatttaatcaccacacaaccatcattgtcatcttcatctataa 35314941  T
Q  639 tcatcaacatcattcttccta 659  Q
    ||||||||| |||||||||||    
T  35314940 tcatcaacaccattcttccta 35314920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 243 - 447
Target Start/End: Original strand, 4167465 - 4167669
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||| ||| ||||||||||||||||||||||||| || ||     
T  4167465 tcccttaacttattttattttctcagtttaatcccttaactattaagtgtgtcaatttgatcctataagtcttctgtcgtttactgttttagtcatttct 4167564  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
    || | |||||||||| |||| | ||||||||||||| || |||||||||| ||||||   |||| ||||  |||  || | |||| ||||||||||||||    
T  4167565 gtcaatttttaacatcaaatttctaaggtgaaccatgtttaaaggtggtccaccatagatcttattaaatttttaaatttcaaccttttgattttttctt 4167664  T
Q  443 taaaa 447  Q
    |||||    
T  4167665 taaaa 4167669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 242 - 582
Target Start/End: Complemental strand, 24495155 - 24494805
Alignment:
Q  242 gtcccttaacttattt-tattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatct 340  Q
    ||||||||||||| || | |||||||||| ||||||||||| ||  |||  | |||| |||||||| || |||||||   |||  ||  ||| ||  |||    
T  24495155 gtcccttaacttaattcttttttctcagtatgatcccttaactaaaaaacctctcaaattggtcccttatgtcttcttctgttacctcgtttggtcctct 24495056  T
Q  341 ccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttttt- 439  Q
    ||||||||||||||||| |||||| ||| |||||||||||| ||| |||||| ||||||||||||| |||   |||| || ||||||||||||||||||     
T  24495055 ccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccatatgccttattaatttttttaattttaaccatttgattttttt 24494956  T
Q  440 -ctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc-- 536  Q
     |||||||| ||| | ||| |||||||| | |||||||| |||||||||||||||||| |||| |||   | |  ||||||||| |||||||||||||      
T  24494955 cctttaaaagataaccgttgaatcatgtggcgtctattgtactttactgtgaaccactcacacctaataaaattgattcatcttcttcttccctcatctc 24494856  T
Q  537 ------atcttcaacaacaacttcatcgataaactccaaaaaatcccaaaaa 582  Q
          ||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  24494855 ttcatgatcttcaacaacaacttcatcaataaaatcc-aaaaatcccaaaaa 24494805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 242 - 447
Target Start/End: Complemental strand, 14109172 - 14108969
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||||||| ||| |||||| ||||  |||||||||  ||||| || ||||||| ||||||||  ||||    
T  14109172 gtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccat--gtcttttgccgtttaccgttttagtcctctc 14109075  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||  ||||| ||||| |||  || |||||| ||| |||||||||    
T  14109074 cgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaaccttttaattttttct 14108975  T
Q  442 ttaaaa 447  Q
    ||||||    
T  14108974 ttaaaa 14108969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 242 - 447
Target Start/End: Complemental strand, 14419129 - 14418926
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||||||| ||| |||||| ||||  |||||||||  ||||| || ||||||| ||||||||  ||||    
T  14419129 gtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccat--gtcttttgccgtttaccgttttagtcctctc 14419032  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||  ||||| ||||| |||  || |||||| ||| |||||||||    
T  14419031 cgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaaattttaaattttaaccttttaattttttct 14418932  T
Q  442 ttaaaa 447  Q
    ||||||    
T  14418931 ttaaaa 14418926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 132102 - 131967
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| |||||| ||||||||||||| ||||||   ||||||||  | |  | |||||    
T  132102 gtcccttaacttattttattttctcagtttggtcccttaactattaagtgtgtcgatttggtcccataagtcttcctccgtttactaatgtgatcatctc 132003  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||||||||| |||||||| ||||||||||||    
T  132002 cgttagtttttaaccttaaatgtctaaggtgaacca 131967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 241 - 377
Target Start/End: Complemental strand, 27899318 - 27899182
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatct 340  Q
    ||||||||||||||||||||||||| |||||| ||| |||| ||| |||| | |||||||| |||||||  |||| ||||||||||| |||| ||  | |    
T  27899318 agtcccttaacttattttattttcttagtttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtcttat 27899219  T
Q  341 ccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||||||||||||| |||||| | ||||||||||||    
T  27899218 ccgttagtttttaaccttaaatatctaaggtgaacca 27899182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 243 - 375
Target Start/End: Original strand, 4857215 - 4857347
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||   || ||| |||| |||| ||| ||| |||||| || ||||||||||| |  ||||||| ||||||||||||||||  |||||    
T  4857215 tcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttactgttttagtcctctcc 4857314  T
Q  343 gttagtttttaacattaaatgtttaaggtgaac 375  Q
    ||||||||||||||| |||||| ||||||||||    
T  4857315 gttagtttttaacatcaaatgtctaaggtgaac 4857347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 10257489 - 10257385
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||  |||  ||||||||||| ||||||| || ||    
T  10257489 gtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactct--tgtcgtttactattttagtcatttc 10257392  T
Q  342 cgttagt 348  Q
     ||||||    
T  10257391 tgttagt 10257385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 242 - 384
Target Start/End: Original strand, 43930332 - 43930474
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||||||| || |||||||||||| |||  |||||||||||||||| |||| ||  ||||    
T  43930332 gtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttggtcctctc 43930431  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaa 384  Q
     |||| |||||||| |||||||| ||||||| || ||||||||    
T  43930432 tgttaatttttaaccttaaatgtctaaggtggactatattaaa 43930474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 4168951 - 4168890
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  4168951 tcccttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaatttggtc 4168890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 243 - 374
Target Start/End: Complemental strand, 13287096 - 13286965
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||  |||||||| ||||||  ||||||||||||| |||||| ||| ||||||||||||| || ||||| ||  ||||||| |||| ||  ||| |    
T  13287096 tcccttagtttattttaatttctctatttgatcccttaactattaagtgtttcaatttggtcccttatgtcttatgctgtttactattttggtcctcttc 13286997  T
Q  343 gttagtttttaacattaaatgtttaaggtgaa 374  Q
    ||||||||||||| |||||||| |||| ||||    
T  13286996 gttagtttttaaccttaaatgtctaagatgaa 13286965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 27897706 - 27897772
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    ||||||||||||||||||||||| | |||||| |||||||||| |||||| ||||||||||||||||    
T  27897706 tcccttaacttattttattttcttaatttgattccttaattataaaatgtttcaatttggtcccata 27897772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 47537143 - 47537080
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||||  ||||||||||| |||||||| |||||||||| ||||||||||||    
T  47537143 gtcccttaacttattttaacttctcagtttggtcccttaactattaaatgtttcaatttggtcc 47537080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 377
Target Start/End: Original strand, 10256141 - 10256271
Alignment:
Q  247 ttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtta 346  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||| ||||  ||||| ||||  |||||| ||||||| | |||| || || ||   ||    
T  10256141 ttaacttattttattttctcagtttggtcccttaactattaagtgtctcaaaatggtctcataactcttctatcgtttagtattttggtcatttctagta 10256240  T
Q  347 gtttttaacattaaatgtttaaggtgaacca 377  Q
     |||||||| ||||| || ||||||||||||    
T  10256241 atttttaaccttaaaagtctaaggtgaacca 10256271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 29409336 - 29409279
Alignment:
Q  247 ttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| |||| ||||||    
T  29409336 ttaacttattttattttctcagtttgatcccttaactataaaatgtctcaaattggtc 29409279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 312 - 388
Target Start/End: Original strand, 38406101 - 38406177
Alignment:
Q  312 tcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggt 388  Q
    ||||||| ||||||||||||| ||  | ||||||| |||||||||| |||||| |||||||||||||||| ||||||    
T  38406101 tcttctgacgtttactgttttggtcctttccgttaatttttaacatcaaatgtctaaggtgaaccatatttaaaggt 38406177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 269 - 377
Target Start/End: Complemental strand, 46458789 - 46458681
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    |||| |||||||| ||| || ||| ||||||||||||||||  ||||||  |||||||  |||| ||  |||||||| ||||||||| |||||||| |||    
T  46458789 tttggtcccttaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtttgtttttaaccttaaatgtctaa 46458690  T
Q  369 ggtgaacca 377  Q
    |||||||||    
T  46458689 ggtgaacca 46458681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 333
Target Start/End: Complemental strand, 4858447 - 4858356
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttta 333  Q
    |||||||||||||||||   || ||| ||||||||| ||| ||| |||||| ||||||||||||||||  |||||||| ||||||| |||||    
T  4858447 gtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgtttactatttta 4858356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 29344177 - 29344240
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||| || | ||||||||||    
T  29344177 gtcccttaacttattttaatttctcagtttgaccccttaactattaaacgttttaatttggtcc 29344240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 35484413 - 35484278
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||||||| ||||||||| ||| |||| ||| || | | ||||||| ||||||||  ||||||| | ||  || |||| ||   ||     
T  35484413 gtcccttaacttattttatttcctcagtttggtcctttaactataaagtatttcaatttagtcccataactcttctgccattacctattttggtccactt 35484314  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||||||||||||  ||||||| ||||||||||||    
T  35484313 cgttagtttttaaccctaaatgtctaaggtgaacca 35484278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 18802492 - 18802382
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| ||||||||| ||| ||| || ||| ||||||| ||||||||  | |||| ||||| ||| ||||||||||| |    
T  18802492 gtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttctatcgttcactattttagttatcgc 18802393  T
Q  342 cgttagttttt 352  Q
    ||| |||||||    
T  18802392 cgtcagttttt 18802382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 22061898 - 22061792
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| |||| |||| ||| ||| ||| || ||||||||||||||||  |||| || |||||||| |||||||  ||||    
T  22061898 gtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtttactattttagtcttctc 22061799  T
Q  342 cgttagt 348  Q
    |||||||    
T  22061798 cgttagt 22061792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 29408259 - 29408321
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||| |||| |||||||||||||||||||||||||||||| ||| |||||| |||| ||||||    
T  29408259 gtcctttaatttattttattttctcagtttgatcccttaactataaaatgtttcaaattggtc 29408321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 43007700 - 43007646
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagt 348  Q
    |||||||||||||||| ||||| ||||||||||| |||||||| |||||||||||    
T  43007700 tcaatttggtcccataagtcttatgtcgtttactattttagttctctccgttagt 43007646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 40881095 - 40881167
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  |||||||||||||||||| ||||||||| || |||||||| ||||||  || ||||||||||||    
T  40881095 catcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcc 40881167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 25155039 - 25154904
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| ||||||||||||| ||| || ||| |||||||  || ||||  ||||||   |||||   |||| || |||||    
T  25155039 gtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttatcattttggtcatctc 25154940  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||| ||||||||| |||||||| ||||||||||||    
T  25154939 cgtttgtttttaaccttaaatgtctaaggtgaacca 25154904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 33071741 - 33071682
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttg 301  Q
    |||||||||||||||||| |||||||||||  | |||||| |||||||||| ||||||||    
T  33071741 gtcccttaacttattttaatttctcagtttagttccttaactattaaatgtttcaatttg 33071682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 37781970 - 37782033
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||| |||||||| |||||||||||| | | |||| |||||||||| ||||||||||||    
T  37781970 gtcccttaaattattttaatttctcagtttggttctttaactattaaatgtttcaatttggtcc 37782033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 246 - 305
Target Start/End: Original strand, 47927396 - 47927455
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||| |||||||||||  |||||||| |||||||||| || |||||||||    
T  47927396 cttaacttattttaatttctcagtttagtcccttaactattaaatgtttcgatttggtcc 47927455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 47928533 - 47928470
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||||| ||||| |||||  || ||||| |||||||||| ||||||||||||    
T  47928533 gtcccttaacttattttaatttcttagtttagtctcttaactattaaatgtttcaatttggtcc 47928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 7148161 - 7148055
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| |||| ||   ||| ||| || ||| ||||||||||||| ||  |||| |||||||||||||||| ||| ||||    
T  7148161 gtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggttctctc 7148062  T
Q  342 cgttagt 348  Q
    |||||||    
T  7148061 cgttagt 7148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 332
Target Start/End: Original strand, 19278366 - 19278456
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    |||||||||||||||||    | ||| |||| |||||||||||| || ||| ||||||||||||||||  ||||||| |||||||| ||||    
T  19278366 gtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtttactatttt 19278456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 348
Target Start/End: Original strand, 43006398 - 43006504
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| |||||| ||| ||||||||||||| || ||||| || ||||| || |||| || |||||    
T  43006398 gtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgccgtttgctattttggtcatctc 43006497  T
Q  342 cgttagt 348  Q
    |||||||    
T  43006498 cgttagt 43006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 14206731 - 14206796
Alignment:
Q  287 aaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttttt 352  Q
    |||||| |||||||||||| |||  |||||||||||||||| ||||  | ||||||||||||||||    
T  14206731 aaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttt 14206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 14215421 - 14215486
Alignment:
Q  287 aaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttttt 352  Q
    |||||| |||||||||||| |||  |||||||||||||||| ||||  | ||||||||||||||||    
T  14215421 aaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttt 14215486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 352
Target Start/End: Complemental strand, 24873695 - 24873590
Alignment:
Q  247 ttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtta 346  Q
    |||||||||||| | || ||| |||||| || ||| ||| || ||| |||||||||||||||| |||||||| |||||||  |||| || || ||||||     
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgttt 24873596  T
Q  347 gttttt 352  Q
    ||||||    
T  24873595 gttttt 24873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 29345176 - 29345119
Alignment:
Q  247 ttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||| |||||||| ||| ||||||||||||||||| |||||||||| | |||||||||    
T  29345176 ttaatttattttaatttttcagtttgatcccttaactattaaatgttttaatttggtc 29345119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 269 - 377
Target Start/End: Original strand, 26406165 - 26406273
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    ||||||||| |||  || || ||| |||||||| || ||||  ||||||| ||||||   |||| || |||||||||| |||||||| |||||||| |||    
T  26406165 tttgatcccataacgataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttattttttaaccttaaatgtctaa 26406264  T
Q  369 ggtgaacca 377  Q
    |||||||||    
T  26406265 ggtgaacca 26406273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 45719651 - 45719763
Alignment:
Q  265 tcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgt 364  Q
    ||||||||||||| ||| ||| || ||| | ||||||||| ||||  |||||||| ||||||  |||| ||| | | ||| ||||||||||| |||||||    
T  45719651 tcagtttgatcccctaactataaagtgtctaaatttggtctcataactcttctgttgtttaccattttggtttttttcgtcagtttttaacactaaatgt 45719750  T
Q  365 ttaaggtgaacca 377  Q
     ||||||| ||||    
T  45719751 ctaaggtggacca 45719763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 346
Target Start/End: Complemental strand, 46675036 - 46674933
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||   || ||| ||||||||||||| ||| || ||| || |||||||||||||  |||| || |||||||| |||| ||  |||||    
T  46675036 tcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtttactattttggtcctctcc 46674937  T
Q  343 gtta 346  Q
    ||||    
T  46674936 gtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 305
Target Start/End: Original strand, 7338156 - 7338218
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||| | |||||| ||  |||||||||  ||||||||||||||||| ||||    
T  7338156 tcccttaacttattttttcttctcacttcaatcccttaacaattaaatgtgtcaatttagtcc 7338218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 489
Target Start/End: Complemental strand, 19848836 - 19848690
Alignment:
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
    |||| |||||||||  |||| | ||||||||||||||||  |||||| || |||||   ||||| |||||| ||| ||  ||||| ||||||||||| ||    
T  19848836 gttaatttttaacagcaaatctctaaggtgaaccatatttcaaggtgatccaccatggaccttagtaaaaaatttaattgtaaccctttgattttttgtt 19848737  T
Q  443 taaaaaatagctgttaaatcatgtagggtctattgcactttactgtg 489  Q
    ||||| |    ||||  ||||||||| |||||||| | |||||||||    
T  19848736 taaaagaggattgttggatcatgtagagtctattgtattttactgtg 19848690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 378
Target Start/End: Original strand, 40930458 - 40930567
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    |||| |||| ||| ||| || ||| ||||||||||||||||  |||| ||  |||||| ||||||||  ||||  |||||||||||||| |||| | |||    
T  40930458 tttggtcccctaactataaagtgtttcaatttggtcccataaatcttttgatgtttaccgttttagtcctctctattagtttttaacatcaaatatctaa 40930557  T
Q  369 ggtgaaccat 378  Q
    |||| |||||    
T  40930558 ggtggaccat 40930567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 309
Target Start/End: Original strand, 41985927 - 41985995
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    |||||||||||||| || ||| ||||| ||||||||| ||| ||| |  ||| ||||||||||||||||    
T  41985927 agtcccttaacttaattgattgtctcaatttgatcccctaactataatttgtttcaatttggtcccata 41985995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 43936189 - 43936133
Alignment:
Q  296 aatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttttt 352  Q
    ||||||||| ||||  |||||||||||||||| |||| ||  |||||||||||||||    
T  43936189 aatttggtctcataattcttctgtcgtttactattttggtcctctccgttagttttt 43936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 46457086 - 46457150
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    ||||||||||||||   || ||| ||||||||||||| ||| || ||| ||||||||||||||||    
T  46457086 ccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccata 46457150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 233 - 621
Target Start/End: Original strand, 40920 - 41300
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    |||||||| |||||||||| | ||||||||| ||||||||||||||||| |||||| |        |||||| |||| ||||||||||||||||||||||    
T  40920 catcccctggtcccttaaccttttttattttttcagtttgatcccttaactattaagt--------ttggtctcataagtcttctgtcgtttactgtttt 41011  T
Q  333 agttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttg 432  Q
    |||| |||| ||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||  ||||||| |||||||||||    
T  41012 agttctctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaatttttttattttaaccatttg 41111  T
Q  433 attttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccct 532  Q
    ||||||| ||||||| ||| | ||| ||||||||||| | ||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  41112 attttttttttaaaagataaccgttgaatcatgtaggatttattgtactttactgtgaaccactaacacctaagttaatccattcatcttcttcttccct 41211  T
Q  533 catcatcttcaacaacaacttcatcgataaactccaaaaaatcccaaaaataataattaaacctactatttaataaccatgcaaccatc 621  Q
    ||||||||| ||||||||||||||| ||||| || | ||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  41212 catcatcttaaacaacaacttcatcaataaaatctagaaaatcccaaaaataataattaaacctactatttaatcaccacacaaccatc 41300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 332
Target Start/End: Complemental strand, 42449 - 42359
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    |||||||||||||||||||||||||||||||||||||||| |||||  ||| |||||||| |||||||  |||||||||||||||| ||||    
T  42449 gtcccttaacttattttattttctcagtttgatcccttaactattacgtgtatcaatttgatcccataaatcttctgtcgtttactatttt 42359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 4e-58; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 242 - 536
Target Start/End: Complemental strand, 17350205 - 17349911
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| ||||||||||||| || |||||||   |||  || |||| ||  ||||    
T  17350205 gtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgttacctcttttggtcctctc 17350106  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||  |||| || ||||||||||||||||||||    
T  17350105 cgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattttttaattttaaccatttgattttttct 17350006  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc 536  Q
    |||||| |   | ||| ||||||||||||||||||| |||||| |||||||||||||||| |||   | | |||||||||| |||||||||||||    
T  17350005 ttaaaagaggaccgttgaatcatgtagggtctattgaactttattgtgaaccactaacacctaataaaatacattcatcttcttcttccctcatc 17349911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 246 - 639
Target Start/End: Original strand, 39133034 - 39133448
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    |||||||||||||   || ||| |||| |||| ||| ||| || ||| ||||||||||||| || ||||||| |||||  || |||| ||  |||| |||    
T  39133034 cttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgtt 39133133  T
Q  346 agtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctttaa 445  Q
    |||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||  |||| || ||||||||||||||||||||||||    
T  39133134 agtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaaattttttaattttaaccatttgattttttctttaa 39133233  T
Q  446 aaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc-------at 538  Q
    || |   | ||| ||||||||| ||||||||| |||||| |||||||||||||||| |||   | | || ||||||| |||||||||||||       ||    
T  39133234 aagaggacagttgaatcatgtaaggtctattgtactttattgtgaaccactaacacctaataaaatacagtcatcttcttcttccctcatctcttcatat 39133333  T
Q  539 cttcaacaacaacttcatcgataaactccaa-------aaaatcccaaa----aataataattaaacctactatttaataaccatgcaac---catcgtc 624  Q
    ||||||||| ||||||||| |||||  ||||       |||||||||||    ||||| ||||||| |||||||||||| ||||  ||||   |||||||    
T  39133334 cttcaacaataacttcatcaataaaacccaaaacccagaaaatcccaaaaaataataacaattaaatctactatttaatcaccacacaaccatcatcgtc 39133433  T
Q  625 atcttcatctatcat 639  Q
    |||||||||||||||    
T  39133434 atcttcatctatcat 39133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 242 - 399
Target Start/End: Original strand, 23559832 - 23559989
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||| |||||||  |||||||||||||||| |||| ||  ||||    
T  23559832 gtcccttaacttattttattttctcagtttggtcccttaattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctc 23559931  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    |||||||||||||| |||| ||| |||| |||||||  || | |||||||| ||||||    
T  23559932 cgttagtttttaaccttaattgtctaagatgaaccaactttataggtggtccaccata 23559989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 269 - 501
Target Start/End: Original strand, 11219470 - 11219702
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    |||| |||| ||| ||| || ||| ||||||||||| |||  |||||||| |||||||| |||| || ||||||||||| ||||||||| |||  | |||    
T  11219470 tttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctccgttagattttaacatcaaaattctaa 11219569  T
Q  369 ggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtag 468  Q
    ||||||||||||| |||||||||  ||||||   | || ||||  |||| || |||||||||||||||||||||||||| |   | ||| ||| ||||||    
T  11219570 ggtgaaccatatttaaaggtggttcaccatagatcgtattaaattttttaattttaaccatttgattttttctttaaaagaggaccgttgaattatgtag 11219669  T
Q  469 ggtctattgcactttactgtgaaccactaacac 501  Q
    ||||||||| ||||| |||||||||||||||||    
T  11219670 ggtctattgtactttcctgtgaaccactaacac 11219702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 299 - 491
Target Start/End: Complemental strand, 7483571 - 7483379
Alignment:
Q  299 ttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccat 398  Q
    |||||||| || |||||||  ||||  || |||| || ||||||||||||||||||||| |||| | |||||||||||||||||||| |||| | |||||    
T  7483571 ttggtcccttatgtcttcttccgttacctcttttggtcatctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggcccaccat 7483472  T
Q  399 atgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaa 491  Q
    |||||||| |||   |||| || |||||||||||||||||||||||||| |   | ||| |||||||| |||||||||  |||||||||||||    
T  7483471 atgccttattaatttttttaattttaaccatttgattttttctttaaaagaggaccgttgaatcatgtggggtctattatactttactgtgaa 7483379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 294 - 501
Target Start/End: Original strand, 53808383 - 53808590
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||| ||||||||||  |||| ||||||||||| |||| || |||||| |||||||||||||| |||| | ||||||||| |||||  ||||||||||     
T  53808383 tcaatctggtcccataaatcttatgtcgtttactattttggtcatctccattagtttttaacatcaaatttctaaggtgaatcatatctaaaggtggtcc 53808482  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaacc 493  Q
    ||||||  ||||| ||||  |||  || |||||| ||||||||||||||||||| | |   |||  |||||||||| ||||||| | |||||||||||||    
T  53808483 accataaaccttattaaatttttaaattttaaccctttgattttttctttaaaagagaatcgttggatcatgtaggatctattgtattttactgtgaacc 53808582  T
Q  494 actaacac 501  Q
    ||||||||    
T  53808583 actaacac 53808590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 242 - 439
Target Start/End: Complemental strand, 12062487 - 12062290
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||| ||| |||||||||||||||   |||| ||  ||||||| |||| || || ||    
T  12062487 gtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgtttactattttggtcatttc 12062388  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttttt 439  Q
    | |||||||||||| |||||||| ||||||||||||  || | ||||| || ||||||| ||||| ||||  || |  | ||||||||||||||||||    
T  12062387 cattagtttttaaccttaaatgtctaaggtgaaccaactttataggtgatccaccatataccttattaaatcttgtatttttaaccatttgatttttt 12062290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 43346547 - 43346344
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgt 344  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||  ||||||||||||||   |||| || || | |||    
T  43346547 ccttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtctcataactcttctgtcgtttatcattttggtcattttcgt 43346448  T
Q  345 tagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttcttta 444  Q
      |||||||||  ||||||| ||||||| ||||   | | |||||||| ||||||  ||||||||||  |||| || |||||||||| || ||||  |||    
T  43346447 ctgtttttaaccctaaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaaattttttaattttaaccatttaatattttagtta 43346348  T
Q  445 aaaa 448  Q
    ||||    
T  43346347 aaaa 43346344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 243 - 448
Target Start/End: Original strand, 21127939 - 21128144
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||||||  ||||||| |||||||  |||| || || |||    
T  21127939 tcccttaacttattttattttttcagtttgatctcttaactattaagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtcatttcc 21128038  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
    ||  |||||||||  ||||||| ||||||| ||||   | | |||||||| ||||||  |||||| ||   |||| || ||||||||||||| ||||  |    
T  21128039 gtctgtttttaaccctaaatgtctaaggtggaccaacattataggtggtccaccatagaccttacaaagttttttaattttaaccatttgatattttagt 21128138  T
Q  443 taaaaa 448  Q
    ||||||    
T  21128139 taaaaa 21128144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 352
Target Start/End: Original strand, 43345333 - 43345442
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||||||||||||||||||||||| | |||||||| ||| |||||| ||||||||||||||||  |||||| ||||||||  |||| ||| |||||    
T  43345333 tcccttaacttattttattttctcagttaggtcccttaactataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctcc 43345432  T
Q  343 gttagttttt 352  Q
    ||||||||||    
T  43345433 gttagttttt 43345442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 240 - 406
Target Start/End: Original strand, 25583125 - 25583290
Alignment:
Q  240 tagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatc 339  Q
    |||||||||||||||||||   || ||| |||| |||| ||| ||||||| || |||||||||||||||| |||||||| |||||||| |||| ||  ||    
T  25583125 tagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttactattttggtcctc 25583224  T
Q  340 tccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgcctta 406  Q
    || |||| |||||||| |||||||| ||||| |||| ||||| ||||||| || |||||| ||||||    
T  25583225 tctgttaatttttaaccttaaatgtctaaggcgaactatatt-aaaggtgctccaccataggcctta 25583290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 243 - 447
Target Start/End: Original strand, 8371234 - 8371438
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||||||||||| | || ||| |||| |||| ||| ||| |||||| |||||||||| |||||  |||||||  ||||||| |||| ||  |||||    
T  8371234 tcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtttactattttggtcctctcc 8371333  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
    ||||||||||||||| |||| | ||| | ||||| || | | |||||||| |||||   ||||| ||||  |||| || |||||| ||||||||||||||    
T  8371334 gttagtttttaacatcaaatatctaaagcgaaccgtacttagaggtggtccaccatggaccttagtaaattttttaattttaaccctttgattttttctt 8371433  T
Q  443 taaaa 447  Q
    |||||    
T  8371434 taaaa 8371438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 23561227 - 23561143
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttact 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| |||  ||||||| ||||||||    
T  23561227 tcccttaacttattttattttctcagtttgatcccttaattattaagtgtcttaatttggtcctataattcttctgacgtttact 23561143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 32979197 - 32979360
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||||||||||||||||| |  |||||||||| ||||| |||||||||  ||||||  || || ||||  |||| || ||||||||||||||      
T  32979197 tctccgttagtttttaacattaaaagactaaggtgaactatatttaaaggtggttcaccatagaccgtattaaattttttaattttaaccatttgattga 32979296  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    |||||||||| ||  ||||| ||| ||||||||| ||||| |||||| ||| || |||||||||    
T  32979297 ttctttaaaagatgactgttgaattatgtagggtatattgtactttattgtaaatcactaacac 32979360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 294 - 501
Target Start/End: Complemental strand, 34903044 - 34902838
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||||||||| | || || |||||||||| ||| |||| || ||||||||||||||||||||  |||||| ||| |||||||||||| |||||||||      
T  34903044 tcaatttggtctcttatgttttctgtcgtt-actcttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgc 34902946  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaacc 493  Q
    |||||   ||||| ||||  |||| || |||||| |||||||||||| |||||| |    ||||  |||||||||||| |||||   |||| ||||||||    
T  34902945 accatggaccttagtaaattttttaattttaaccttttgattttttcattaaaagaggattgttggatcatgtagggtttattgttttttagtgtgaacc 34902846  T
Q  494 actaacac 501  Q
    ||||||||    
T  34902845 actaacac 34902838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 48867533 - 48867398
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||| |||||||||||||||||||  |||||    ||||||||  | | ||  | ||    
T  48867533 gtcccttaacttattttattttctcaatttggtcccttaactattaagtgtgtcaatttggtcccattagtctttctacgtttactaatgtggtcctttc 48867434  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
     ||||||||||||| |||||||| ||||||||||||    
T  48867433 tgttagtttttaaccttaaatgtctaaggtgaacca 48867398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 245 - 377
Target Start/End: Complemental strand, 35174482 - 35174350
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgt 344  Q
    ||||||||||||||||||| ||| |||| |||||||| |||||| ||| ||||  ||||||||||  |||||| ||||||||| |||| || || || ||    
T  35174482 ccttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgt 35174383  T
Q  345 tagtttttaacattaaatgtttaaggtgaacca 377  Q
    || |||||||| ||||| || ||||||||||||    
T  35174382 taatttttaaccttaaaagtctaaggtgaacca 35174350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 35173151 - 35173250
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||| |||||| | | ||||||||||| ||||  |||| ||||||||||| ||||    
T  35173151 catcccccagtcccttaacttattttattttctcaatttcatcccttaactattaagtatttcaatttggtctcataactcttttgtcgtttactatttt 35173250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 505
Target Start/End: Original strand, 47765521 - 47765715
Alignment:
Q  312 tcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaa 411  Q
    ||||| || ||||| |||||| || ||||||||||||||||||||| |||| | | |||||||||||  | |||| ||||| ||||||  ||||| | ||    
T  47765521 tcttccgttgtttattgttttggtcatctccgttagtttttaacatcaaatatcttaggtgaaccattgttaaagatggtccaccatagaccttattgaa 47765620  T
Q  412 aatttttatcttaaccatttga-ttttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaa 505  Q
      |||  || |||||| ||||| |||||||||||||| |    ||||  |||||||||||||||||| | ||||  |||||||||||||||||||    
T  47765621 tttttaaattttaaccttttgatttttttctttaaaagaggattgttggatcatgtagggtctattgtattttagcgtgaaccactaacacttaa 47765715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 246 - 352
Target Start/End: Original strand, 48866158 - 48866264
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    ||||||||||||||||||||||||||  ||||| || |||||| |||||||||||||||| ||| |||||||  ||||||||  | | ||  ||||||||    
T  48866158 cttaacttattttattttctcagtttagtccctgaactattaagtgtgtcaatttggtcctataagtcttcttccgtttactaatatggtcctctccgtt 48866257  T
Q  346 agttttt 352  Q
    |||||||    
T  48866258 agttttt 48866264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 2088846 - 2088918
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  ||||||||| |||||||| |||||||||| | ||||||||||||||||||| ||||||||||||    
T  2088846 catcccccggtcccttaatttattttaatttctcagttaggtcccttaattattaaatgtttcaatttggtcc 2088918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 50150725 - 50150797
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  |||||||||||||||||| |||||||||||| || ||||| |||||||||| ||||||||||||    
T  50150725 catccccgggtcccttaacttattttaatttctcagtttggtcacttaactattaaatgtttcaatttggtcc 50150797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 1031820 - 1031891
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||||||  |||||||||||||||||| ||||||||| || |||||||| |||||||||| |||||||||||    
T  1031820 catcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaatgtttcaatttggtc 1031891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 33000903 - 33000840
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||    
T  33000903 gtcccctaacttattttaatttctcagtttgatcccttaactattaaacgtttcaatttggtcc 33000840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 39531919 - 39531856
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||| |||||| ||||||||||||    
T  39531919 gtcccttaacttattttaatttctcagtttaatcccttaactatgaaatgtttcaatttggtcc 39531856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 7921746 - 7921636
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||| ||| |||| |||||||| || || || |||||||  || ||||  |  ||||    
T  7921746 gtcccttaacttattttgttttctcagtttgatcacttaactattaagtgtctcaaattggtcccttatgtattgtgtcgttacctattttgatcctctc 7921647  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  7921646 cgttagttttt 7921636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 25585936 - 25585826
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||| ||||||| | || ||| | || |||  ||| ||||||| || ||||||||||| ||||  |||||||||||||||| ||||||| |||||    
T  25585936 gtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtctcataaatcttctgtcgtttactattttagtcatctc 25585837  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  25585836 cgttagttttt 25585826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 45730641 - 45730710
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttgg 302  Q
    |||| ||| |||||||||||||||||| |||||||||||| |||||||| ||||||| || |||||||||    
T  45730641 catctcctggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttgg 45730710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 39530799 - 39530867
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttg 301  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||||| ||||||| || ||||||||    
T  39530799 catcccccggtcccttaacttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttg 39530867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 31638227 - 31638335
Alignment:
Q  338 tctccgttagtttttaacattaaatgttt--aaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatt 435  Q
    |||||| ||||||||||||| |||| | |  ||||||||||||||| |||||||||| |||||| |||||||||||  |||| || |||    |||||||    
T  31638227 tctccgctagtttttaacatcaaatatatctaaggtgaaccatatttaaaggtggtctaccatacgccttactaaattttttaattttac---tttgatt 31638323  T
Q  436 ttttctttaaaa 447  Q
    ||||||||||||    
T  31638324 ttttctttaaaa 31638335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 46688411 - 46688481
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggt 303  Q
    |||||||| |||| ||||||||||||| ||||||| ||||||||  |||||||||||||| | ||||||||    
T  46688411 catcccctggtcctttaacttattttaatttctcaatttgatcctgtaattattaaatgttttaatttggt 46688481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 51825724 - 51825618
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| |||||||| ||| || ||| ||||||||||||||||  |||||||||||||||| |||| || || ||    
T  51825724 gtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttactattttggtcatatc 51825625  T
Q  342 cgttagt 348  Q
    |||||||    
T  51825624 cgttagt 51825618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 12060670 - 12060731
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttgg 302  Q
    |||||||||||||||||||||||||||||||  || ||||| |||||| ||| |||||||||    
T  12060670 agtcccttaacttattttattttctcagtttagtctcttaactattaagtgtctcaatttgg 12060731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 32999812 - 32999869
Alignment:
Q  244 cccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttg 301  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||| | ||||||    
T  32999812 cccttaacttattttaatttctcagtttggtcccttaactattaaatgttttaatttg 32999869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 54654069 - 54653964
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| |||||||| ||| || ||| ||||||||||||||||  |||||||||||||||| |||| ||  ||||    
T  54654069 gtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtttactattttggtcctctc 54653970  T
Q  342 cgttag 347  Q
    ||||||    
T  54653969 cgttag 54653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 305
Target Start/End: Original strand, 4067942 - 4068002
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||| ||| ||||||| ||||||||| |||||||||| | ||||||||||    
T  4067942 ccttaacttattttaatttatcagtttaatcccttaactattaaatgttttaatttggtcc 4068002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 269 - 392
Target Start/End: Original strand, 19622045 - 19622168
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    |||| |||| ||| ||| || ||| ||||||| ||| ||||  |||||||   ||||||| ||| ||  |||||||||||||| ||||| ||||||||||    
T  19622045 tttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttactggtttggtcctctccgttagttttcaacatcaaatgtttaa 19622144  T
Q  369 ggtgaaccatattaaaaggtggtc 392  Q
    ||||||| || || ||||||||||    
T  19622145 ggtgaactatgtttaaaggtggtc 19622168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 50765877 - 50765814
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||| |||||||| |||||||||||||||  |||| ||||||| || ||||||||||||    
T  50765877 gtcccttaatttattttaatttctcagtttgatcttttaactattaaacgtttcaatttggtcc 50765814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 352
Target Start/End: Complemental strand, 32980550 - 32980445
Alignment:
Q  247 ttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtta 346  Q
    |||||||||||| | || ||| |||| |||| ||| ||  || ||| |||||||||||| |||  ||||||| |||||||| |||| || ||||||||||    
T  32980550 ttaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgtta 32980451  T
Q  347 gttttt 352  Q
    ||||||    
T  32980450 gttttt 32980445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 53901583 - 53901644
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||||||| |||||||| |||||||||||  |||||||| |||||||||| | |||||||||    
T  53901583 tcccttaatttattttaatttctcagtttagtcccttaactattaaatgttttaatttggtc 53901644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 269 - 377
Target Start/End: Complemental strand, 26798982 - 26798874
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    |||| |||| ||| ||| |||||| ||||||||||||||||  |||||   |||||||  |||| ||  |||||||||||||||||| ||||||| ||||    
T  26798982 tttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccgtttaccattttggtcctctccgttagtttttaaccttaaatggttaa 26798883  T
Q  369 ggtgaacca 377  Q
     | ||||||    
T  26798882 agcgaacca 26798874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 43101907 - 43102010
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||  ||||||| || ||| ||||||||||||||||  |||||||||| ||||| ||||  | |||||    
T  43101907 gtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtcgcttactattttgatcatctc 43102006  T
Q  342 cgtt 345  Q
    ||||    
T  43102007 cgtt 43102010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 323
Target Start/End: Original strand, 38639034 - 38639112
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtt 323  Q
    ||||||||||||||| ||| |||||||| |||||||| ||| || ||| || |||||||| | || |||||| ||||||    
T  38639034 ccttaacttattttagtttttcagtttggtcccttaactataaagtgtttcgatttggtctcttatgtcttccgtcgtt 38639112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 348
Target Start/End: Original strand, 42632719 - 42632825
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||| |||   || ||| |||| |||| ||| ||| || ||| |||||||| |||||||  |||| ||||||||||| |||||||  ||||    
T  42632719 gtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgtttactattttagtcctctc 42632818  T
Q  342 cgttagt 348  Q
    |||||||    
T  42632819 cgttagt 42632825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 352
Target Start/End: Original strand, 48252946 - 48253056
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||| | | || | | |||| |||| ||| ||| || ||| |||||||||||||||| ||||||   ||||||||  | |||| |||||    
T  48252946 gtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtcatctc 48253045  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  48253046 cgttagttttt 48253056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 19579397 - 19579316
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtt 323  Q
    |||||||||||||||||    | ||| |||| |||||||| ||| || ||| ||||||||||||| || |||||||||||||    
T  19579397 gtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 19579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 98; Significance: 6e-48; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 243 - 536
Target Start/End: Complemental strand, 13306 - 13013
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||   || |||||||| |||| ||| ||| |||||| ||||||| ||||||||  ||||||  ||||  || |||| ||  | |||    
T  13306 tcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttccgttacctcttttggtcctatcc 13207  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
     |||| ||||||||| |||||| |||||||||||||||| |||| ||||| ||||||| || |||||||| |||| ||||||||||||||||||||||||    
T  13206 attaggttttaacatcaaatgtctaaggtgaaccatatttaaagatggtccaccatataccctactaaaatttttaatcttaaccatttgattttttctt 13107  T
Q  443 taaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc 536  Q
    ||||| |   ||||| |||  |||||||||||||| |||||| ||| |||||||||||  |||   | |||||||||||| |||||||||||||    
T  13106 taaaagaggactgttgaattttgtagggtctattgtactttattgtcaaccactaacatctaataaaatccattcatcttcttcttccctcatc 13013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 317
Target Start/End: Original strand, 11719 - 11794
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttct 317  Q
    ||||||||||||||||| | || |||||||  |||| ||||||| || ||| ||||||||||||| || |||||||    
T  11719 gtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttct 11794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 240 - 647
Target Start/End: Complemental strand, 44103401 - 44102976
Alignment:
Q  240 tagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatc 339  Q
    ||||||||||||||| ||  |||| | ||  ||||||| ||| ||  ||| || |||| |||||| | || |||||||  ||||| || |||| ||  ||    
T  44103401 tagtcccttaacttaattcttttttttagaatgatcccctaactaaaaaacgtctcaaattggtctcttatgtcttcttccgtttcctcttttggtcctc 44103302  T
Q  340 tccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaattttta-tcttaaccatttgattttt 438  Q
    |||||||||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||||| |||   |||||| | |||||||||||||||||    
T  44103301 tccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatatgccttattaattttttttaattttaaccatttgattttt 44103202  T
Q  439 t-ctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc- 536  Q
    | | |||||| |   | ||| |||||||| |||||||||| |||||| ||||||||||| |||| |||   | |||||||||||| |||| ||||||||     
T  44103201 ttcattaaaagaagaccgttgaatcatgtggggtctattgtactttattgtgaaccactcacacctaataaaatccattcatcttcttctcccctcatct 44103102  T
Q  537 -------atcttcaacaacaacttcatcgataaactccaaaaaatcccaaa-----aataataattaaacctactatttaataaccatgcaaccatc--- 621  Q
           |||||||||||||| |||||| ||||| |||| |||||||||||     || ||||||||  |||||| |||||| | ||   |||||||       
T  44103101 cttcatgatcttcaacaacaaattcatcaataaaatccagaaaatcccaaaaaaataaaaataattattcctactctttaatcatcacataaccatcatt 44103002  T
Q  622 gtcatcttcatctatcatcatcaaca 647  Q
    ||||||||||||||||||||||||||    
T  44103001 gtcatcttcatctatcatcatcaaca 44102976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 242 - 568
Target Start/End: Original strand, 21670077 - 21670411
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||| ||  |||||||||| || |||| ||| ||  ||| || |||| |||||||| || |||||||  ||||  || |||| ||  ||||    
T  21670077 gtcccttaacttaattctttttctcagtatggtcccctaactaaaaaacgtctcaaattggtcccttatgtcttcttccgttacctcttttggtcttctc 21670176  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||||||||||||| |||| | |||||||||||||||||||| |||||| ||||||||||||| |||   |||| || ||||||||||| ||||||||    
T  21670177 cgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgccttattaatttttttaattttaaccatttggttttttct 21670276  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatc----- 536  Q
    |||||| |   | ||| |||||||| |||||||||  |||||| |||||| || | |||| |||   | || ||||||||| |||||||||||||         
T  21670277 ttaaaagaggaccgttgaatcatgtggggtctattatactttagtgtgaatcattcacacctaataaaatcaattcatcttgttcttccctcatctcttc 21670376  T
Q  537 ---atcttcaacaacaacttcatcgataaactcca 568  Q
       ||||||||||||||||||||| ||||| ||||    
T  21670377 atgatcttcaacaacaacttcatcaataaaatcca 21670411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 242 - 497
Target Start/End: Original strand, 10052117 - 10052372
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||| |   || ||| |||| |||| ||||||| || ||| |||| |||||||| || ||| |||| ||||  || |||| || |||||    
T  10052117 gtcccttaacttattcttgattttcactttggtcccctaattataaagtgtctcaaattggtcccttatgtcatctgccgttacctcttttggtcatctc 10052216  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    | ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||  ||||| ||||  |||   | |||||| |||||||||||||    
T  10052217 ctttagtttttaacattaaatgtctaagatgaaccatatttaaaggtggtccaccataaaccttattaaatttttaagttttaaccctttgattttttct 10052316  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccacta 497  Q
    |||||| ||   ||||  |||||||||||||||||| | |||||||||||||||||    
T  10052317 ttaaaagatgattgttggatcatgtagggtctattgtattttactgtgaaccacta 10052372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 242 - 659
Target Start/End: Complemental strand, 39325937 - 39325511
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | |||||| |||  |||| ||| ||  ||| || | || |||||||| || || ||||  ||||  || ||||||| |||||    
T  39325937 gtcccttaacttattttctgttctcattttagtcccctaactaaaaaacgttttaaattggtcccttatgttttcttccgttacctcttttagtcatctc 39325838  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatt-ttttc 440  Q
     | ||||||||||||| |||||| |||||||||| || || |||||||||| | ||||||||||||||||  |||| || |||||||||||||| |||||    
T  39325837 tgctagtttttaacatcaaatgtctaaggtgaactatgtttaaaggtggtctatcatatgccttactaaattttttaattttaaccatttgatttttttc 39325738  T
Q  441 tttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaagttagtccattcatctttttcttccctcatcatct 540  Q
    ||||||| |  || |||  |||||||| |  |||||| |||||||||||||||| |||||| |||   | || ||||||||| ||||| | ||||| |||    
T  39325737 tttaaaagaatgcagttggatcatgtacgacctattgtactttactgtgaaccattaacacctaataaaatctattcatcttcttctt-catcatc-tct 39325640  T
Q  541 tc---aacaacaacttcatcgataaactccaaaaaatcccaaa----aataataattaaacctactatttaataaccatgcaaccatc---gtcatcttc 630  Q
    ||   | |  |||| ||||| ||||| | || |||||||||||    || |||||||||||||||  |||||| ||||  ||||||||   |||||||||    
T  39325639 tcatgatcttcaacatcatcaataaaattcagaaaatcccaaaaaataaaaataattaaacctaccttttaatcaccacacaaccatcattgtcatcttc 39325540  T
Q  631 atctatcatcatcaacatcattcttccta 659  Q
    ||||||||||||||||| | |||||||||    
T  39325539 atctatcatcatcaacacccttcttccta 39325511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 338 - 500
Target Start/End: Original strand, 21961932 - 21962094
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||||||||||||| |||||| | ||||||||||| || |||||||||| ||||||||||||||||||  |||| || ||||||||||||||||    
T  21961932 tctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaattttttaattttaaccatttgatttt 21962031  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaaca 500  Q
    |||||||||| |   |  || ||||| || | |||||||| ||||||||||||||||||||||    
T  21962032 ttctttaaaacaagaccattgaatcaagttgagtctattgtactttactgtgaaccactaaca 21962094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 243 - 392
Target Start/End: Complemental strand, 41522790 - 41522641
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||||||||||||||| |||  |||| |||||| |||||||||||||||| ||| |||||||| ||||||||||||||||  | |||    
T  41522790 tcccttaacttattttattttctcagtttaatcatttaactattaagtgtgtcaatttggtcctataagtcttctgccgtttactgttttagtcctttcc 41522691  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtc 392  Q
    || | |||||||||| |||| |||||| |||||||| || ||| ||||||    
T  41522690 gtcaatttttaacatcaaatatttaagatgaaccatgtttaaaagtggtc 41522641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 242 - 501
Target Start/End: Original strand, 36756077 - 36756337
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || | | |||| |||| ||| ||| || ||| ||||| ||||| ||||  |||| ||||||||||| |||| || |||||    
T  36756077 gtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtttactattttggtcatctc 36756176  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||||||||||||| |||| | ||||||||| |||||| |||||||||  |||||| |||||| ||||  |||  || |||||| ||| |||||||||    
T  36756177 cgttagtttttaacatcaaatttctaaggtgaatcatatttaaaggtggttcaccataagccttattaaatttttaaattttaaccctttaattttttct 36756276  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtct-attgcactttactgtgaaccactaacac 501  Q
    |||||| | |   |||  |||||||||||||| |||| | |||||||||||||||||||||    
T  36756277 ttaaaagagaatcgttggatcatgtagggtctaattgtattttactgtgaaccactaacac 36756337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 377
Target Start/End: Original strand, 8095359 - 8095494
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||   |||| ||||||||||| |||| ||  | ||    
T  8095359 gtcccttaacttattttattttctcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttc 8095458  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||||||||  |||||||| ||||||||||||    
T  8095459 cgttagtttttaatcttaaatgtctaaggtgaacca 8095494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 243 - 411
Target Start/End: Original strand, 117062 - 117230
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||   || ||| |||| |||| ||||||| |||||| |||||||| |||||||  |||||||||||||| |||||| ||  |||||    
T  117062 tcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgtttattgttttggtcctctcc 117161  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaa 411  Q
    ||||||||||||||| |||||| ||||||||  ||| || |||||||||| ||||||  ||||||||||    
T  117162 gttagtttttaacatcaaatgtctaaggtgagtcatgtttaaaggtggtccaccatagaccttactaaa 117230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 13513529 - 13513692
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||| ||||||||| |||||| |||| ||||||||||| ||| |||||| ||||||| ||||| |||   |||| || ||||||||||||||||    
T  13513529 tctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaaccatttgatttt 13513628  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    |||||||||| |   | ||| ||||||||  ||||||||| |||||||||||||||||| ||||    
T  13513629 ttctttaaaataggaccgttgaatcatgtgaggtctattgtactttactgtgaaccactcacac 13513692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 13603062 - 13603225
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||| ||||||||| |||||| |||| ||||||||||| ||| |||||| ||||||| ||||| |||   |||| || ||||||||||||||||    
T  13603062 tctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaaccatttgatttt 13603161  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    |||||||||| |   | ||| ||||||||  ||||||||| |||||||||||||||||| ||||    
T  13603162 ttctttaaaataggaccgttgaatcatgtgaggtctattgtactttactgtgaaccactcacac 13603225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 245 - 399
Target Start/End: Complemental strand, 13367150 - 13366996
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgt 344  Q
    ||||||||||||||||||| ||| |||| |||||||| ||| || ||| | ||||||||||||||  ||||||| |||||||| |||| ||  |||||||    
T  13367150 ccttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgt 13367051  T
Q  345 tagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    ||||||||||| |||||||| ||||||||||||  || | |||||||| ||||||    
T  13367050 tagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 13366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 245 - 501
Target Start/End: Complemental strand, 39546777 - 39546521
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgt 344  Q
    |||||||||||||| | || ||| |||| | || ||| | | || ||| ||||||||||||||||  | || || ||||||| ||||| || ||||||||    
T  39546777 ccttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgt 39546678  T
Q  345 tagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttcttta 444  Q
    ||||||||||||| ||||||||||| |||||||| || |||||||||| |||||   ||||| ||||||  || || |||||| ||||||||||| ||||    
T  39546677 tagtttttaacatcaaatgtttaagatgaaccatgtttaaaggtggtccaccatggaccttagtaaaaaaattaattttaaccctttgatttttttttta 39546578  T
Q  445 aaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    ||| |    ||||  ||||||| || ||||||| | ||||| ||||||||| |||||    
T  39546577 aaagaggattgttggatcatgtgggatctattgtattttaccgtgaaccacaaacac 39546521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 447
Target Start/End: Complemental strand, 37276346 - 37276141
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||| |||||||   || ||| ||||||||||||| ||| || ||| ||||||||||||||||  |||| || |||||| | | || ||  ||||    
T  37276346 gtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttattatattggtcctctc 37276247  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
     ||||||||||||||| ||| || |||||||||||||||| |||||||||  || |||  || || ||||  |||| || ||||||||||||||||||||    
T  37276246 tgttagtttttaacatcaaaagtctaaggtgaaccatatttaaaggtggttcactatagaccatattaaattttttaattttaaccatttgattttttct 37276147  T
Q  442 ttaaaa 447  Q
    ||||||    
T  37276146 ttaaaa 37276141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 246 - 377
Target Start/End: Original strand, 20308622 - 20308753
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    ||||||||||||||||||||||||||  |  ||||| |||||| ||| ||||||||||| ||||  |||||||||||||||| |||| || || ||| ||    
T  20308622 cttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccatt 20308721  T
Q  346 agtttttaacattaaatgtttaaggtgaacca 377  Q
    | |||||||| |||||||| ||||||||||||    
T  20308722 aatttttaaccttaaatgtctaaggtgaacca 20308753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 246 - 377
Target Start/End: Original strand, 21095255 - 21095386
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    ||||||||||||||||||||||||||  |  ||||| |||||| ||| ||||||||||| ||||  |||||||||||||||| |||| || || ||| ||    
T  21095255 cttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccatt 21095354  T
Q  346 agtttttaacattaaatgtttaaggtgaacca 377  Q
    | |||||||| |||||||| ||||||||||||    
T  21095355 aatttttaaccttaaatgtctaaggtgaacca 21095386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 316
Target Start/End: Complemental strand, 22621237 - 22621163
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttc 316  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| ||||||    
T  22621237 gtcccttaacttattttattttctcagtttgatcccttaactattaagtgtggcaatttggtcccataagtcttc 22621163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 448
Target Start/End: Complemental strand, 34617298 - 34617092
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||| |||| ||||| ||||||||||| |||| |||||| ||||||||||| ||||||||| ||||||  ||||||   |||| || || ||    
T  34617298 gtcccttaacttttttttttttcccagtttgatccattaactattaagtgtgtcaatttagtcccatagctcttcttccgtttatcattttggtcatttc 34617199  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    ||| ||||||||||  ||||||| ||||||| ||||   | | |||||||| ||| ||  ||||||||||  |||| || ||||||||||||| ||||      
T  34617198 cgtcagtttttaaccctaaatgtataaggtggaccaacattacaggtggtccaccgtagaccttactaaattttttaattttaaccatttgatattttag 34617099  T
Q  442 ttaaaaa 448  Q
    |||||||    
T  34617098 ttaaaaa 34617092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 246 - 386
Target Start/End: Original strand, 39220696 - 39220837
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    |||||||||||||| ||||||| |||| ||  |||| |||||| ||| |||||||| | || || |||||||| |||||||| |||| |||||||| |||    
T  39220696 cttaacttattttaatttctcattttggtctattaactattaagtgtttcaatttgattccttaagtcttctgccgtttactattttcgttatctctgtt 39220795  T
Q  346 agtttttaacattaaatgtttaaggtg-aaccatattaaaag 386  Q
    |||||||||| |||||||| ||||||| ||| ||||||||||    
T  39220796 agtttttaaccttaaatgtctaaggtgaaacaatattaaaag 39220837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 242 - 377
Target Start/End: Original strand, 35943920 - 35944056
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaa-tgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatct 340  Q
    |||||||||||||||||   || ||| |||| |||||||||||| ||| ||| ||||||||||||||||  |||| ||  ||||||| |||| || ||||    
T  35943920 gtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagtttactattttggtcatct 35944019  T
Q  341 ccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  35944020 ccgttagtttttaactttaaatgtctaaggtgaacca 35944056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 294 - 501
Target Start/End: Complemental strand, 13363629 - 13363422
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    ||||||||||||| || || |||||| |||  || |||| ||  |||||||||||||||||||  |||||| ||| |||||||||||| |||||||||      
T  13363629 tcaatttggtcccttatgttttctgtggttacctcttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtgc 13363530  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaacc 493  Q
    |||||   ||||| ||||  |||| || |||||| ||| ||||||||||||||| |    ||||  |||||||||||||||||| | |||  ||||||||    
T  13363529 accatggaccttagtaaattttttaattttaaccttttaattttttctttaaaagaggattgttggatcatgtagggtctattgtatttttgtgtgaacc 13363430  T
Q  494 actaacac 501  Q
    ||||||||    
T  13363429 actaacac 13363422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 22619908 - 22619975
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  22619908 gtcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccata 22619975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 243 - 377
Target Start/End: Complemental strand, 2421395 - 2421261
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||| ||| |||||||  |||||||| |||||| ||| |||||||||||||| |  ||||||| |||||| | |||| ||  |||      
T  2421395 tcccttaacttattttaatttatcagtttagtcccttaaatattaagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctcttt 2421296  T
Q  343 gttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||||||||||| |||||||| ||||||||||||    
T  2421295 gttagtttttaaccttaaatgtctaaggtgaacca 2421261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 269 - 447
Target Start/End: Original strand, 7486117 - 7486295
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    ||||||||||||| ||| || ||  ||||||||||||||||  |||| ||  ||||||| |||| ||  |||||||||||||||||||| |||||| |||    
T  7486117 tttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagtttttaacatcaaatgtctaa 7486216  T
Q  369 ggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaa 447  Q
     ||||||||| || ||| || ||| ||||||  ||||| ||||  |||  || ||| || |||||||||||||||||||    
T  7486217 agtgaaccatgtttaaatgttgtccaccatagaccttattaaatttttaaattttagccttttgattttttctttaaaa 7486295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 242 - 448
Target Start/End: Complemental strand, 24069549 - 24069343
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| ||||||||||||| ||| || ||| ||||||||||||||||  ||||||| |||||||  |||| ||  | ||    
T  24069549 gtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtcctttc 24069450  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||  |||||||||| ||||||| ||||||| ||||   | | |||||||| ||||||  |||||||||   |||| || ||||||||||||| ||||      
T  24069449 cgtctgtttttaacactaaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaagttttttaattttaaccatttgatattttag 24069350  T
Q  442 ttaaaaa 448  Q
    |||||||    
T  24069349 ttaaaaa 24069343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 34616143 - 34616209
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| || ||| ||||||||||||||||    
T  34616143 tcccttaacttattttattttctcagtttgatctcttaactataaagtgtctcaatttggtcccata 34616209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 4534046 - 4534110
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||||| |||||||||||| ||| |||| |||||||||| ||||||||||||    
T  4534046 agtcccttaacttattttaatttctcagtttggtcctttaaatattaaatgtttcaatttggtcc 4534110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 16346111 - 16346175
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||||| || ||||||||||||    
T  16346111 agtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcc 16346175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 41521331 - 41521411
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtt 323  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| || ||||| ||||||||| || | ||||| |||||||    
T  41521331 tcccttaacttattttattttttcagtttgatcccttaactataaagtgtgttaatttggtctcacaagtcttttgtcgtt 41521411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 35463092 - 35463029
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||| |||||||    
T  35463092 gtcctttaacttattttattttctcagtttgatcccttaactataaaatgtctcaaattggtcc 35463029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 9190542 - 9190482
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||| |||||||||||  |||||||| |||||||||| ||||||||||||    
T  9190542 ccttaacttattttaatttctcagtttagtcccttaactattaaatgtttcaatttggtcc 9190482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 35462680 - 35462743
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||| ||||||||||||||||||||||||||||||||||| | | |||||| |||| |||||||    
T  35462680 gtcctttaacttattttattttctcagtttgatcccttaactgtaaaatgtctcaaattggtcc 35462743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 12818767 - 12818829
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||||  | |||||||||||    
T  12818767 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacatttcaatttggtc 12818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 417
Target Start/End: Original strand, 36070192 - 36070366
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||| |||||||   || ||| |||| |||| ||| ||| || ||| |||||||| |||||||  ||||||| |||||||| |||| ||  || ||    
T  36070192 tcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtttactattttggtcctcccc 36070291  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttt 417  Q
    |||||| ||| || |||||||| ||||||||||||  || | |||||||| ||||||  ||||| |||| |||||    
T  36070292 gttagtctttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaaatatttt 36070366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 309
Target Start/End: Complemental strand, 8096657 - 8096581
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    ||||||||||||||||||||||||||||||| |||||||  || ||||| ||||||  || | ||||||||| ||||    
T  8096657 catcccctagtcccttaacttattttattttttcagtttagtctcttaactattaagcgtcttaatttggtctcata 8096581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 22913208 - 22913264
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttg 301  Q
    ||||||||||||||| |||||||||| |||||||||| || ||||||| ||||||||    
T  22913208 ccttaacttattttaatttctcagttggatcccttaactagtaaatgtttcaatttg 22913264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 45195908 - 45195844
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||| || ||| ||||||| ||||    
T  45195908 agtcccttaacttattttaatttctcagtttggtcccttaaatataaagtgtctcaatttagtcc 45195844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 9189407 - 9189470
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||| |||||||| ||||||||| || |||||||| ||||||| || ||||||||||||    
T  9189407 gtcccttaatttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtcc 9189470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 377
Target Start/End: Original strand, 19913557 - 19913640
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||||||||||| ||||||||  |||||   |||| ||  |||||||||||||||||| |||||| | ||||||||||||    
T  19913557 tcaatttggtcccataagtcttctgcggtttatcattttggtcctctccgttagtttttaaccttaaatttctaaggtgaacca 19913640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 22914293 - 22914234
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttg 301  Q
    |||||||||||||||||| ||| |||||||||||| |||| ||||||| || ||||||||    
T  22914293 gtcccttaacttattttaatttttcagtttgatccattaactattaaacgtttcaatttg 22914234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 36940136 - 36940026
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| ||||||||| ||| ||| || ||| ||||||||||  ||||  ||||||| |||||||| |||| || |||||    
T  36940136 gtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgtttactattttggtcatctc 36940037  T
Q  342 cgttagttttt 352  Q
    ||||| |||||    
T  36940036 cgttaattttt 36940026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 36938750 - 36938843
Alignment:
Q  298 tttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggt 391  Q
    ||||||| ||||  ||||||| |||||||| |||| ||  |||| |||| |||||||||| |||| | ||| |||||||||||| |||||||||    
T  36938750 tttggtctcataaatcttctgccgtttactattttggtcttctctgttaatttttaacatcaaatatctaaagtgaaccatatttaaaggtggt 36938843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 4535140 - 4535069
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||| ||| ||||||||| |||||||| |||||||||||| || ||| ||||||||| || ||||||||||||    
T  4535140 catctcctggtcccttaatttattttaatttctcagtttggtcactt-attattaaacgtttcaatttggtcc 4535069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 10053849 - 10053737
Alignment:
Q  240 tagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatc 339  Q
    |||||||||||||||||||   || ||| |||| |||||||| ||| || ||| |||| |||||||| || ||||| |||||||  || |||| ||| ||    
T  10053849 tagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgttacctcttttggttctc 10053750  T
Q  340 tccgttagttttt 352  Q
    ||||||| |||||    
T  10053749 tccgttaattttt 10053737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 12820210 - 12820138
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  |||||| ||||||||||| |||||||||| | |||||||| ||||||| || | ||||||||||    
T  12820210 catcccccggtccctaaacttattttaatttctcagttcggtcccttaactattaaacgttttaatttggtcc 12820138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 24750135 - 24750071
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||||| | |||||| ||   |||||||| | |||||||||||||||||||||    
T  24750135 agtcccttaacttattttttcttctcacttcagtcccttaacttttaaatgtgtcaatttggtcc 24750071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 346
Target Start/End: Original strand, 31623919 - 31624023
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| ||||||||||||||||  |||| ||||||||| | |||||||  ||||    
T  31623919 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtttattattttagtcctctc 31624018  T
Q  342 cgtta 346  Q
    |||||    
T  31624019 cgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 281
Target Start/End: Original strand, 2419887 - 2419926
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaa 281  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  2419887 gtcccttaatttattttaatttctcagtttgatcccttaa 2419926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 16363863 - 16363780
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||| |||||||  || ||||  ||||||| |||| ||  |||||||||||| ||||| |||||||| ||||||||||||    
T  16363863 tcaatttgatcccataaatcgtctgctgtttactattttggtcctctccgttagttattaactttaaatgtctaaggtgaacca 16363780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 23768588 - 23768525
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||||| ||| |||||||| |||||| | |||||||||| | || |||||||    
T  23768588 gtcccttaacttattttagtttttcagtttggtcccttcactattaaatgttttaaattggtcc 23768525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 31872907 - 31872844
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||| ||||||||||||| |||||||||||||||||| || ||  |||||| |||| |||||||    
T  31872907 gtcctttaacttattttaatttctcagtttgatccctcaactaaaaaatgtctcaaattggtcc 31872844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 41866907 - 41866974
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    |||||||||||||||||   || ||| ||||||||||||| ||| || ||| ||||||||||||||||    
T  41866907 gtcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccata 41866974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 43386805 - 43386738
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    |||||||||||||||||   || |||||||| |||| ||| ||| |||||| ||||||||||||||||    
T  43386805 gtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccata 43386738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 21267241 - 21267351
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttga-ttt 436  Q
    |||||||||||||||||||| |||| | ||||||| |||||  |  ||||||||| ||||||| ||| | ||||  |||  || |||||| ||||| |||    
T  21267241 tctccgttagtttttaacatcaaatatctaaggtggaccatgattcaaggtggtccaccatatacctaattaaatttttaaattttaaccttttgatttt 21267340  T
Q  437 tttctttaaaa 447  Q
    |||||||||||    
T  21267341 tttctttaaaa 21267351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 352
Target Start/End: Original strand, 24068343 - 24068453
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| |||||||||||||||| ||||||   ||||||||  ||| ||  ||||    
T  24068343 gtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatttggtcctctc 24068442  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  24068443 cgttagttttt 24068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 360
Target Start/End: Original strand, 29738304 - 29738422
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| |||| ||  |||| ||| || ||| ||||||| ||| |||| |||||||| |||||||  |||| ||  ||||    
T  29738304 gtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttggtcctctc 29738403  T
Q  342 cgttagtttttaacattaa 360  Q
    |||| ||||||||| ||||    
T  29738404 cgtttgtttttaaccttaa 29738422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 332
Target Start/End: Complemental strand, 35945540 - 35945450
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    ||||||||||||||||| | || ||| |||  |||||||| ||| |||||| ||| ||||||||||||  |||||||  ||||||| ||||    
T  35945540 gtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagtttactatttt 35945450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 346
Target Start/End: Complemental strand, 31625484 - 31625383
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgt 344  Q
    ||||||||||||||   || ||| |||| |||| ||||||| || ||| ||||||||||||||||  |||| || |||||||| |||| ||  |||||||    
T  31625484 ccttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgt 31625385  T
Q  345 ta 346  Q
    ||    
T  31625384 ta 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 44606248 - 44606309
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    ||||| |||||||||||| |||||||| ||||||||||||  || | |||||||| ||||||    
T  44606248 tctccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 44606309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 8395064 - 8395200
Alignment:
Q  298 tttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaacca 397  Q
    ||||||||||||  ||||||  |||||||  |||| ||  |||||||||||||||||| ||||||| ||||  |||||||  ||   |||||||| ||||    
T  8395064 tttggtcccataattcttcttccgtttaccattttggtcctctccgttagtttttaaccttaaatggttaaaatgaaccaactttgtaggtggtccacca 8395163  T
Q  398 tatgccttactaaaaatttttatcttaaccatttgat 434  Q
    ||  | ||| |||||| ||| || |||||| ||||||    
T  8395164 tacactttattaaaaaatttaattttaaccgtttgat 8395200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 399
Target Start/End: Complemental strand, 37324790 - 37324634
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||   || | | |||| |||| ||| ||| |||||| ||||||||||| || |  |||||   | |||||| ||||  || |||||    
T  37324790 tcccttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtctcaaaaatcttcgaccatttactattttgtttctctcc 37324691  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    |||| ||||| || |||||||| ||||||||||||  || | |||||||| ||||||    
T  37324690 gttaatttttcactttaaatgtctaaggtgaaccaactttataggtggtccaccata 37324634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 43579692 - 43579756
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||| ||||||||||||| | |||||| ||   |||||||| |||||||||| ||||||||||||    
T  43579692 agtctcttaacttattttttcttctcacttcagtcccttaactattaaatgtttcaatttggtcc 43579756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 9e-38; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 243 - 447
Target Start/End: Original strand, 7426655 - 7426859
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    |||||||| |||||||||||||| ||||| |||||||||||||||| ||||||||| |||| ||||| |||| ||| | |||||||||||| |  | |||    
T  7426655 tcccttaatttattttattttcttagtttaatcccttaattattaagtgtgtcaatatggttccataagtctactgccatttactgttttattcctttcc 7426754  T
Q  343 gttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctt 442  Q
    || | |||||||||| |||||| ||||||||| |||||| |||||||||| ||||||  ||||| ||||  |||  || | |||| ||||||||||||||    
T  7426755 gtcaatttttaacatcaaatgtctaaggtgaatcatatttaaaggtggtccaccatagaccttattaaatttttaaatttcaaccttttgattttttctt 7426854  T
Q  443 taaaa 447  Q
    |||||    
T  7426855 taaaa 7426859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 501
Target Start/End: Original strand, 21387650 - 21387909
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| |||| ||| ||| |||||| ||||||||||||||||  ||||||| ||||  || |||| ||  | ||    
T  21387650 gtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcctgtc 21387749  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
     ||||||||||||||| |||  | ||||||||| |||||| |||||||||  |||||| ||| || ||||  |||| || ||||||||||||||||||||    
T  21387750 tgttagtttttaacatcaaaactctaaggtgaaacatatttaaaggtggttcaccataggccgtattaaattttttaattttaaccatttgattttttct 21387849  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    |||||| |   | ||| ||| ||||||||||||||| |||||||||| ||| ||||||||    
T  21387850 ttaaaagaggaccgttgaattatgtagggtctattgtactttactgtaaacgactaacac 21387909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 12831041 - 12830906
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||  |||||||  ||||||| |||| ||  ||||    
T  12831041 gtcccttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctc 12830942  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||| ||||||||  ||||| | | ||||||||||    
T  12830941 cgttaatttttaaccctaaatatcttaggtgaacca 12830906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 233 - 364
Target Start/End: Original strand, 42510118 - 42510249
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    ||||||||  |||||||| |||||||||||| |||||||| |||||||| ||| || ||| ||||||||||||||||  ||||||| |||||||| ||||    
T  42510118 catcccctgatcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactatttt 42510217  T
Q  333 agttatctccgttagtttttaacattaaatgt 364  Q
     ||| |||||||||||||||||| | ||||||    
T  42510218 ggttctctccgttagtttttaacctcaaatgt 42510249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 246 - 377
Target Start/End: Complemental strand, 12863017 - 12862886
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||  |||||||  ||||||| |||| ||  ||||||||    
T  12863017 cttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgtt 12862918  T
Q  346 agtttttaacattaaatgtttaaggtgaacca 377  Q
    | ||||||||  ||||| | | ||||||||||    
T  12862917 aatttttaaccctaaatatcttaggtgaacca 12862886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 15857721 - 15857611
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| || ||| |||||||| |||||||  |||| ||||||||||  |||| || |||||    
T  15857721 gtcccttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctc 15857622  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  15857621 cgttagttttt 15857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 242 - 375
Target Start/End: Original strand, 32734145 - 32734277
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||| ||||||||||||||||| |||||||| |||||||| |||||  ||| | ||||||||||||||  |||||||||||||||| |||| || || ||    
T  32734145 gtcctttaacttattttattttttcagtttggtcccttaactattag-tgtcttaatttggtcccataactcttctgtcgtttactattttggtcatttc 32734243  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaac 375  Q
    |||||||||||||  |||||| | ||||||||||    
T  32734244 cgttagtttttaatcttaaatatctaaggtgaac 32734277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 243 - 348
Target Start/End: Complemental strand, 32735581 - 32735476
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||  ||||||| |||||| | |||| || |||||     
T  32735581 tcccttaacatattttattttctcaatttgatcccttaattattaaatgttttaatttggtcccataactcttctgccgtttattattttggtcatctct 32735482  T
Q  343 gttagt 348  Q
    ||||||    
T  32735481 gttagt 32735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 332
Target Start/End: Complemental strand, 22819650 - 22819562
Alignment:
Q  244 cccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||  ||||||| |||||||| ||||    
T  22819650 cccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttctgccgtttactatttt 22819562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 246 - 377
Target Start/End: Original strand, 40058035 - 40058166
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgtt 345  Q
    |||||||||||||   || ||| ||||||||||||| |||||| ||| |||| |||||| ||||  ||||||| |||||||  |||| || |||||||||    
T  40058035 cttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgtt 40058134  T
Q  346 agtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||||  |||||||| ||||||||||||    
T  40058135 agtttttaatcttaaatgtctaaggtgaacca 40058166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 242 - 316
Target Start/End: Complemental strand, 8188303 - 8188229
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttc 316  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||| |||||||||||||||| ||| ||||||    
T  8188303 gtcccttaacttattttattttttcagtttgatcctttaactattaagtgtgtcaatttggtcctataagtcttc 8188229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 11907273 - 11907201
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  |||||||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||||    
T  11907273 catcccccggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcc 11907201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 269 - 489
Target Start/End: Original strand, 18693738 - 18693957
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    |||| |||||||| ||| |||||| ||||| ||||||||||  ||||||||||||  || |||| ||  |||| ||||||||||||||| |||  | |||    
T  18693738 tttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcctctctgttagtttttaacatcaaaactctaa 18693837  T
Q  369 ggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaaaatagctgttaaatcatgtag 468  Q
    ||||||||||||  |||||||||  ||||||  || || ||||  |||| || |||| ||||||| ||||||||||||| |   | ||| ||| |||||     
T  18693838 ggtgaaccatatataaaggtggttcaccatagaccgtattaaattttttaattttaatcatttga-tttttctttaaaagaggaccgttgaattatgtat 18693936  T
Q  469 ggtctattgcactttactgtg 489  Q
     |||||||| |||||||||||    
T  18693937 agtctattgtactttactgtg 18693957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 42511774 - 42511660
Alignment:
Q  237 ccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagtt 336  Q
    |||||||||||||| |||||||||||| |||||||| |||||||| ||| || ||| |||||||| | |||||  ||||||| ||||| || |||| | |    
T  42511774 ccctagtcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttgcttccataaatcttctgccgtttcctattttggct 42511675  T
Q  337 atctccgttagtttt 351  Q
    ||||||||| |||||    
T  42511674 atctccgttggtttt 42511660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 24761829 - 24761740
Alignment:
Q  237 ccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttac 326  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||| |||||||| || ||||  || |||| |||||||    
T  24761829 ccctagtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaatttgatctcataactcgtctgccgtttac 24761740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 269 - 399
Target Start/End: Original strand, 38471329 - 38471459
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    |||| |||||||| | | || ||| |||||||||| |||||  ||||||  |||||||| |||| ||| |||| |||| |||||||| ||||||||||||    
T  38471329 tttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggttctctctgttaatttttaaccttaaatgtttaa 38471428  T
Q  369 ggtgaaccatattaaaaggtggtcaaccata 399  Q
    |||||||||  || | |||||||| ||||||    
T  38471429 ggtgaaccaactttataggtggtctaccata 38471459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 39135751 - 39135689
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtc 304  Q
    |||| ||||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||    
T  39135751 gtcctttaacttattttaatttctcagtttgctcccttaactattaaatgtttcaatttggtc 39135689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 242 - 399
Target Start/End: Original strand, 5382955 - 5383112
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||  |||| || | ||||||| || ||| ||||||||||||||||  ||||  |||||||||| ||||  |  ||||    
T  5382955 gtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtttactattttgatcctctc 5383054  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    |||||||||||||| |||||||| ||||||||| ||  || | |||||||| ||||||    
T  5383055 cgttagtttttaaccttaaatgtctaaggtgaatcaactttataggtggtccaccata 5383112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 8187179 - 8187255
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgt 319  Q
    ||||||||| |||||||||||||||||||| || |||||| |||||||||||||||||| ||| ||||  ||||||||    
T  8187179 gtcccttaatttattttattttctcagtttaat-ccttaactattaaatgtgtcaatttagtctcataattcttctgt 8187255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 283 - 439
Target Start/End: Complemental strand, 2167576 - 2167421
Alignment:
Q  283 tattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatatta 382  Q
    |||||| ||| ||||||||||||||||  ||||||| |||||| | |||| ||  |||| ||||||||||||| |||||||| ||||||||||||  ||     
T  2167576 tattaagtgtttcaatttggtcccataaatcttctgccgtttattattttggtc-tctctgttagtttttaaccttaaatgtctaaggtgaaccaacttt 2167478  T
Q  383 aaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttttt 439  Q
    | || ||||| ||||||  ||||| ||||  ||||  | |||||| |||||||||||    
T  2167477 atagatggtccaccatagaccttattaaatcttttattattaaccgtttgatttttt 2167421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 24070409 - 24070481
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  ||||||||| |||||||| ||||||||| ||||||||||| ||||||| || ||||||||||||    
T  24070409 catcccccggtcccttaatttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttggtcc 24070481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 332
Target Start/End: Original strand, 18677989 - 18678079
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgtttt 332  Q
    |||||||||||||||||   || ||| ||||||||| ||| ||| || ||| ||||||||||||||||  ||||||||||||||| |||||    
T  18677989 gtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtttaccgtttt 18678079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 24071545 - 24071483
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||| ||| |||||||  | ||||||||||||||||| ||||||||||||    
T  24071545 tcccttaacttattttaatttttcagtttagttccttaattattaaatgtttcaatttggtcc 24071483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 39134671 - 39134741
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggt 303  Q
    |||||||  ||||||||||||||||||  ||||||||||| |||||||| ||||||| || ||||||||||    
T  39134671 catcccccggtcccttaacttattttaaattctcagtttggtcccttaactattaaacgtttcaatttggt 39134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 12861553 - 12861626
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtccc 306  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||||| ||  ||| || |||| ||||||||    
T  12861553 catcctctcgtcccttaacttattttattttctcagtttggtcccttaactaagaaacgtctcaaattggtccc 12861626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 8284347 - 8284284
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||||| |||||||||||  || ||||| |||||||||| | ||||||||||    
T  8284347 gtcccttaacttattttaatttctcagtttagtctcttaactattaaatgttttaatttggtcc 8284284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 19525391 - 19525256
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| || |||||||| |||| |||||||| |||||||  |||| ||  ||||    
T  19525391 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtttaccattttggtcctctc 19525292  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||| ||||||||| |||||| | || |||||||||    
T  19525291 cgtttgtttttaaccttaaatttctatggtgaacca 19525256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 21006153 - 21006216
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||| | |||||| |||  |||||||| | |||||||||||||||||||||    
T  21006153 gtcccttaacttattttttcttctcactttagtcccttaacttttaaatgtgtcaatttggtcc 21006216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 298 - 377
Target Start/End: Complemental strand, 22819564 - 22819485
Alignment:
Q  298 tttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||||||||||  ||||||| |||||||| |||| || |||||||||||||||||||  || || | ||||||||||||    
T  22819564 tttggtcccataactcttctgccgtttactattttggtcatctccgttagtttttaaccctatatatctaaggtgaacca 22819485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 224693 - 224583
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||||| || ||| |||| |||| ||| ||| || ||| ||||||||||| |||| ||||||   || |||||  | |||| |||||    
T  224693 gtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtcttcctccgattactaatgtagtcatctc 224594  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  224593 cgttagttttt 224583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 12829574 - 12829647
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtccc 306  Q
    ||||| || |||||||||||||||||||||| |||||||| |||||||| ||  ||| || |||| ||||||||    
T  12829574 catcctctcgtcccttaacttattttattttttcagtttggtcccttaactaagaaacgtctcaaattggtccc 12829647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 316
Target Start/End: Original strand, 30253600 - 30253673
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttc 316  Q
    |||| |||||| ||||||||| ||||| || ||||| || |||||| ||||||||||||||| |||| ||||||    
T  30253600 tcccctaacttgttttattttttcagtgtggtccctcaactattaagtgtgtcaatttggtctcataagtcttc 30253673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 21011911 - 21011848
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||| | |||||| ||   |||||||| |||||||||| ||||||||||||    
T  21011911 gtcccttaacttattttttcttctcacttcagtcccttaactattaaatgtttcaatttggtcc 21011848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 12933762 - 12933848
Alignment:
Q  240 tagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttac 326  Q
    |||||||||||||||||||   || ||| ||||||||| ||| ||| || ||| |||||||| || |||| |||||||| |||||||    
T  12933762 tagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgtttac 12933848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 12947923 - 12948009
Alignment:
Q  240 tagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttac 326  Q
    |||||||||||||||||||   || ||| ||||||||| ||| ||| || ||| |||||||| || |||| ||||| ||||||||||    
T  12947923 tagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgtttac 12948009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 22812490 - 22812380
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| |||  |||||||| ||| |||||| ||| |||| |||||||  |||||||  ||||||| |||| ||   |||    
T  22812490 gtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttactattttggtcccctc 22812391  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  22812390 cgttagttttt 22812380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 4566991 - 4567072
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttt 350  Q
    ||||||||| ||| ||| || ||| ||||||||||||| || |||||||||||||  || |||| || ||||| ||||||||    
T  4566991 tttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcatctctgttagttt 4567072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 276
Target Start/End: Complemental strand, 7428026 - 7427993
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcc 276  Q
    ||||||||||||||||||||| ||||||||||||    
T  7428026 tcccttaacttattttattttttcagtttgatcc 7427993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 346
Target Start/End: Complemental strand, 8762503 - 8762399
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| | | ||| |||||| ||||||||||| ||||  | || ||||||||||| |||||||  ||||    
T  8762503 gtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgtttactattttagtcctctc 8762404  T
Q  342 cgtta 346  Q
    |||||    
T  8762403 cgtta 8762399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 11906371 - 11906415
Alignment:
Q  245 ccttaacttattttattttctcagtttgatcccttaattattaaa 289  Q
    ||||||||||| ||| |||||||||||| |||||||| |||||||    
T  11906371 ccttaacttatgttaatttctcagtttggtcccttaactattaaa 11906415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 38473604 - 38473548
Alignment:
Q  296 aatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttttt 352  Q
    ||||||||||||||  |||||||||||||||| |||| || || ||||||| |||||    
T  38473604 aatttggtcccataaatcttctgtcgtttactattttggtcatttccgttaattttt 38473548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 338 - 500
Target Start/End: Complemental strand, 207805 - 207643
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||||||||||||||||||| |||||| | ||||||||||| || |||||||||| ||||||||||||||||||  |||| || ||||||||||||||||    
T  207805 tctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaaattttttaattttaaccatttgatttt 207706  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaaca 500  Q
    |||||||||| |   |  || ||||| || | |||||||| ||||||||||||||||||||||    
T  207705 ttctttaaaacaagaccattgaatcaagttgagtctattgtactttactgtgaaccactaaca 207643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 241 - 399
Target Start/End: Complemental strand, 14328878 - 14328720
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatct 340  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||||| ||||  |||| ||||||||||| |||| ||  |||    
T  14328878 agtcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctct 14328779  T
Q  341 ccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    |||||| |||||||| |||||||| ||||||||||||  || | |||||||| ||||||    
T  14328778 ccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 14328720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 241 - 399
Target Start/End: Complemental strand, 14421888 - 14421730
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatct 340  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||||| ||||  |||| ||||||||||| |||| ||  |||    
T  14421888 agtcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctct 14421789  T
Q  341 ccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccata 399  Q
    |||||| |||||||| |||||||| ||||||||||||  || | |||||||| ||||||    
T  14421788 ccgttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 14421730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 242 - 505
Target Start/End: Complemental strand, 18139590 - 18139326
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| ||||||||  ||| ||| || ||| |||| |||||||| ||  ||||||| |||||| |||||| ||  ||||    
T  18139590 gtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgtttattgttttggtcctctc 18139491  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaacc-atttgattttttc 440  Q
    | |||||||||||||| |||||| ||||||||||||| || |||| || || ||||||  | ||| ||||  |||  || ||||||  ||||||||||||    
T  18139490 cattagtttttaacatcaaatgtctaaggtgaaccatgtttaaagatgatccaccatagacattattaaatttttaaattttaacctttttgattttttc 18139391  T
Q  441 tttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacacttaa 505  Q
    ||||||| |    ||||  |||||||||||||||||| | |||||||||||||| | ||||||||    
T  18139390 tttaaaagaggattgttggatcatgtagggtctattgtattttactgtgaaccattgacacttaa 18139326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 14326167 - 14326251
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttact 327  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||||||||||  |||||| |||||||||    
T  14326167 tcccttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattcttctatcgtttact 14326251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 14419177 - 14419261
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttact 327  Q
    |||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||||||||||  |||||| |||||||||    
T  14419177 tcccttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattcttctatcgtttact 14419261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 13800044 - 13800111
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  13800044 gtcccttaacttattttattttctcagtttggtcccttaactattaattgtgtcaatttggtcccata 13800111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 294 - 447
Target Start/End: Complemental strand, 13507222 - 13507070
Alignment:
Q  294 tcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtca 393  Q
    |||||||| |||  || |||||||||||||  || || |||| ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||     
T  13507222 tcaatttgatccattatgtcttctgtcgttatctcttctagtcatctctgttagtttttaacatcaaatgtttaaggtgaaccatatttaaaggtggtcc 13507123  T
Q  394 accatatgccttactaaaaatttttatcttaaccatttgattttttctttaaaa 447  Q
    | |||  || ||| |||||  | | || |||||| |||||||||||||||||||    
T  13507122 a-catgggctttaataaaacctctaattttaaccctttgattttttctttaaaa 13507070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 242 - 377
Target Start/End: Original strand, 31738376 - 31738511
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| |||||||||||||||| ||||||||  ||||||  |||| ||  ||||    
T  31738376 gtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcctctc 31738475  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||||||||| |||||||| ||| ||||||||    
T  31738476 cgttagtttttaaccttaaatgtctaatgtgaacca 31738511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 269 - 399
Target Start/End: Complemental strand, 293716 - 293586
Alignment:
Q  269 tttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagtttttaacattaaatgtttaa 368  Q
    ||||||| | ||||||| || ||| ||||||||||| |||| ||||||||||||||||  |||| ||  ||||||||  |||||||| |||||||| |||    
T  293716 tttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgtcgtttaccattttggtcctctccgtttatttttaaccttaaatgtctaa 293617  T
Q  369 ggtgaaccatattaaaaggtggtcaaccata 399  Q
    |||||||||  || | |||||||| ||||||    
T  293616 ggtgaaccaactttataggtggtccaccata 293586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 242 - 374
Target Start/End: Complemental strand, 27440278 - 27440146
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| ||||||||||||| | | || ||| ||||||||||||||||  ||||||  |||||||| |||| ||  ||||    
T  27440278 gtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctc 27440179  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaa 374  Q
    ||||| |||||||| |||||||| |||||||||    
T  27440178 cgttaatttttaactttaaatgtctaaggtgaa 27440146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 1757597 - 1757534
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||| || ||||||||||||    
T  1757597 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcc 1757534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 377
Target Start/End: Original strand, 9927619 - 9927753
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || | |||||| |||| ||| ||| || ||| ||||||||||||||||   ||||  ||||||||| |||| || |||||    
T  9927619 gtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccata-aacttcaatcgtttactattttggtcatctc 9927717  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||| |||||||| |||||||| |||| |||||||    
T  9927718 cgttaatttttaaccttaaatgtctaagatgaacca 9927753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 34084154 - 34084078
Alignment:
Q  425 accatttgattttttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    ||||||||||||||||||||||  |   | ||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  34084154 accatttgattttttctttaaatgaggaccgttgaattatgtagggtctattgtactttactgtgaaccactaacac 34084078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 305
Target Start/End: Original strand, 27107195 - 27107257
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||| |||||||||||||||  |||| |||||||| | ||||||||||||    
T  27107195 tcccttaacttattttaatttctcagtttgatcaattaactattaaatatttcaatttggtcc 27107257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 305
Target Start/End: Original strand, 27149001 - 27149063
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||| |||||||||||||||  |||| |||||||| | ||||||||||||    
T  27149001 tcccttaacttattttaatttctcagtttgatcaattaactattaaatatttcaatttggtcc 27149063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 243 - 352
Target Start/End: Complemental strand, 22300005 - 22299896
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctcc 342  Q
    ||||||||||||||||   || ||| |||| |||| ||| ||| || ||| ||||||||||||||||  ||||||| |||||||| |||| || ||||||    
T  22300005 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctcc 22299906  T
Q  343 gttagttttt 352  Q
    |||| |||||    
T  22299905 gttatttttt 22299896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 411
Target Start/End: Complemental strand, 33802120 - 33801951
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| | |||||| |||||||  |||||||| |||||| || || ||  ||||    
T  33802120 gtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagtttaccgtattggtcctctc 33802021  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaa 411  Q
    |||||||||||||||| |||| | ||||||  |||||  |  ||||||||| ||||||| ||||| ||||    
T  33802020 cgttagtttttaacatcaaatatctaaggtagaccatgattcaaggtggtccaccatataccttattaaa 33801951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 5693689 - 5693641
Alignment:
Q  243 tcccttaacttattttattttctcagtttgatcccttaattattaaatg 291  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  5693689 tcccttaacttattttattttctcaatttgatcccttaactataaaatg 5693641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 16269867 - 16269819
Alignment:
Q  246 cttaacttattttattttctcagtttgatcccttaattattaaatgtgt 294  Q
    |||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  16269867 cttaacttattttattttctcagtttgatctcttaactattaagtgtgt 16269819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 27108277 - 27108217
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttgg 302  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||| || | |||||||    
T  27108277 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttgg 27108217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 27150074 - 27150014
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttgg 302  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||| || | |||||||    
T  27150074 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttgg 27150014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 16251680 - 16251633
Alignment:
Q  241 agtcccttaacttattttattttctcagtttgatcccttaattattaa 288  Q
    |||| ||||| |||||||||||| |||||||| |||||||||||||||    
T  16251680 agtctcttaaattattttattttttcagtttggtcccttaattattaa 16251633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 26452336 - 26452273
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    ||||||||||||||||| | |||||| ||   |||||||| | |||||||||||||||||||||    
T  26452336 gtcccttaacttattttttcttctcacttcagtcccttaacttttaaatgtgtcaatttggtcc 26452273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 8412419 - 8412313
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| |||  |||| ||| ||| || ||| ||||||||||||||||  |||| || |||||||| |||| ||  ||||    
T  8412419 gtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtcctctc 8412320  T
Q  342 cgttagt 348  Q
    |||||||    
T  8412319 cgttagt 8412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 326
Target Start/End: Complemental strand, 31740375 - 31740291
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttac 326  Q
    |||| |||||||||||| | || ||| |||| |||||||| ||| || ||| ||||||||||||||||  |||| || |||||||    
T  31740375 gtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttac 31740291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 242 - 501
Target Start/End: Complemental strand, 731 - 472
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| |||| |||| ||| ||| || ||| ||||||| ||||||||  ||||||| |||||||  |||| || |||||    
T  731 gtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctc 632  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||||||||||||| |||  | |||||||||||||||| |||| ||||  ||| ||   |||| ||||  || | || ||||||||||||||||||||    
T  631 cgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttct 532  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    |||||  | | | ||| ||| |||| |||||||||  ||||||||||||| || ||||||    
T  531 ttaaatgagaaccgttgaattatgtcgggtctattatactttactgtgaatcattaacac 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 242 - 501
Target Start/End: Original strand, 543 - 802
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| |||| |||| ||| ||| || ||| ||||||| ||||||||  ||||||| |||||||  |||| || |||||    
T  543 gtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctc 642  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||||||||||||| |||  | |||||||||||||||| |||| ||||  ||| ||   |||| ||||  || | || ||||||||||||||||||||    
T  643 cgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttct 742  T
Q  442 ttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaacac 501  Q
    |||||  | | | ||| ||| |||| |||||||||  ||||||||||||| || ||||||    
T  743 ttaaatgagaaccgttgaattatgtcgggtctattatactttactgtgaatcattaacac 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 338 - 500
Target Start/End: Complemental strand, 39908 - 39746
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgatttt 437  Q
    |||| ||||||||||||||| ||| || ||||||||| |||||| |||||||||  |||||   || || ||||  |||| || ||||||||||||||||    
T  39908 tctctgttagtttttaacatcaaaagtctaaggtgaatcatatttaaaggtggttcaccatggaccgtattaaattttttaattttaaccatttgatttt 39809  T
Q  438 ttctttaaaaaatagctgttaaatcatgtagggtctattgcactttactgtgaaccactaaca 500  Q
    |||||||||| ||  |  || ||| ||||||||||||||| ||||||||||||||||||||||    
T  39808 ttctttaaaagatgaccattgaattatgtagggtctattgtactttactgtgaaccactaaca 39746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 22185 - 22250
Alignment:
Q  287 aaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctccgttagttttt 352  Q
    |||||| |||||||| || ||||  |||||||||||||||| |||| || |||||||||| |||||    
T  22185 aaatgtctcaatttgttcacataaatcttctgtcgtttactattttggtcatctccgttaattttt 22250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 444
Target Start/End: Complemental strand, 9581 - 9379
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| | || ||| |||| |||| ||| ||| || ||| ||||||| ||||||||  ||||||| |||||||  |||| || |||||    
T  9581 gtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctc 9482  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttgattttttct 441  Q
    |||||||||||||||| |||  | |||||||||||||||| |||| ||||  ||| ||   |||| ||||  || | || ||||||||||||||||||||    
T  9481 cgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggttcaccgtagatcttattaaattttctaattttaaccatttgattttttct 9382  T
Q  442 tta 444  Q
    |||    
T  9381 tta 9379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 352
Target Start/End: Original strand, 8392 - 8502
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||| ||| || ||| |||| |||||||||||  ||||| ||| |||||| |||  || |||||    
T  8392 gtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttcagtcatttactatttcggtcatctc 8491  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  8492 cgttagttttt 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 205655 - 205592
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| || ||||||||||||    
T  205655 gtcccttaacttattttaatttctcagtttggtcccttaattattaaacgtttcaatttggtcc 205592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 204549 - 204613
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatccctta---attattaaatgtgtcaatttggtc 304  Q
    |||||||||||||||||| |||||||| ||| |||||||   |||||||||||| |||||||||||    
T  204549 gtcccttaacttattttaatttctcag-ttggtcccttaactattattaaatgtttcaatttggtc 204613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 4326 - 4237
Alignment:
Q  237 ccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttac 326  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||| |||||||| || ||||  || |||| |||||||    
T  4326 ccctagtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaatttgatctcataactcgtctgccgtttac 4237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 242 - 374
Target Start/End: Original strand, 47083 - 47215
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| ||||||||||||| | | || ||| ||||||||||||||||  ||||||  |||||||| |||| ||  ||||    
T  47083 gtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctc 47182  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaa 374  Q
    ||||| |||||||| |||||||| |||||||||    
T  47183 cgttaatttttaactttaaatgtctaaggtgaa 47215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 242 - 335
Target Start/End: Complemental strand, 17263 - 17170
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagt 335  Q
    |||| ||||||||||||||||| |||||||| |||||||| |||||| ||| |||||||  ||| |||  ||||||||| |||||| |||||||    
T  17263 gtcctttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttaatccaataactcttctgtcatttactattttagt 17170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 377
Target Start/End: Original strand, 15963 - 16093
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||||||| ||| |||| |||||||  ||| || | | |||||     ||||||   ||| || |||||||| |||||||  ||||    
T  15963 gtcccttaacttattttattttttcactttggtcccttagctataaagtatttcaat-----cccataaaccttatgccgtttactattttagtcctctc 16057  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    |||||||||||||| |||||||| |||| |||||||    
T  16058 cgttagtttttaaccttaaatgtctaagatgaacca 16093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 240 - 398
Target Start/End: Complemental strand, 77286 - 77126
Alignment:
Q  240 tagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatc 339  Q
    ||||| ||||||||||||| | || ||| |||| || | ||| ||| ||  || ||||||||||||||||  | ||||  ||||||||||||| ||  ||    
T  77286 tagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttggtcttc 77187  T
Q  340 tccgttagtttttaacattaaatgttt--aaggtgaaccatattaaaaggtggtcaaccat 398  Q
    ||||||| | ||| |||| |||||| |  ||||||||||||||| |||||||||| |||||    
T  77186 tccgttaatgtttgacatcaaatgtgtctaaggtgaaccatatttaaaggtggtccaccat 77126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 85188 - 85116
Alignment:
Q  233 catcccctagtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcc 305  Q
    |||||||  |||||||||||||||||| ||||||||| || |||||||| ||||||  || ||||||||||||    
T  85188 catcccccggtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcc 85116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 447
Target Start/End: Complemental strand, 56803 - 56597
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||||||||||| |  | ||| |||| |||| ||||||| || ||| |||||||||||| |||  ||||||| ||||||||||||   |  ||||    
T  56803 gtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttactgtttagatcctctc 56704  T
Q  342 cgttagtttttaacattaaatgtttaaggtgaaccatattaaaaggtggtcaaccatatgccttactaaaaatttttatcttaaccatttga-ttttttc 440  Q
      |||||||||||||| |||| | |||||  ||| || || |||| ||||| |||| |  ||||| ||||  |||  || |||||| ||||| |||||||    
T  56703 tattagtttttaacatcaaatatctaagggaaactatgtttaaagatggtccaccaaagaccttattaaatttttaaattttaaccttttgatttttttc 56604  T
Q  441 tttaaaa 447  Q
    |||||||    
T  56603 tttaaaa 56597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 1768 - 1876
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||    | ||| |||| |||| ||||||| || ||| ||||||||||||| || |||||||||||||  || |||| ||  ||||    
T  1768 gtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctc 1867  T
Q  342 cgttagttt 350  Q
    |||||||||    
T  1868 cgttagttt 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 338 - 377
Target Start/End: Original strand, 1320 - 1359
Alignment:
Q  338 tctccgttagtttttaacattaaatgtttaaggtgaacca 377  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  1320 tctccgttattttttaaccttaaatgtttaaggtgaacca 1359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 2368 - 2258
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    |||||||||||||||||   || ||| |||| |||| ||||||| || ||| ||||||||||||||||  ||||||   ||||||| |||| ||  | ||    
T  2368 gtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactgtttactattttggtcctttc 2269  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  2268 cgttagttttt 2258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 23419 - 23486
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccata 309  Q
    |||||||||||||||||   || |||||||| |||| ||| ||| |||||| ||||||||||||||||    
T  23419 gtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccata 23486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 24918 - 24808
Alignment:
Q  242 gtcccttaacttattttattttctcagtttgatcccttaattattaaatgtgtcaatttggtcccataggtcttctgtcgtttactgttttagttatctc 341  Q
    ||||||||| |||||||   || |||||||| |||| ||||||| || ||| ||||||||||||| || ||||||   ||||  || |||| || |||||    
T  24918 gtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtcccttatgtcttcctccgttacctattttggtcatctc 24819  T
Q  342 cgttagttttt 352  Q
    |||||||||||    
T  24818 cgttagttttt 24808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University