View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13692_high_14 (Length: 314)

Name: NF13692_high_14
Description: NF13692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13692_high_14
NF13692_high_14
[»] chr7 (52 HSPs)
chr7 (1-314)||(28297719-28298034)
chr7 (1-150)||(44332754-44332904)
chr7 (1-188)||(6356793-6356980)
chr7 (1-150)||(8542564-8542714)
chr7 (21-188)||(10526339-10526506)
chr7 (1-150)||(8937084-8937234)
chr7 (1-118)||(31638178-31638296)
chr7 (1-150)||(33716653-33716803)
chr7 (7-150)||(19681736-19681880)
chr7 (23-118)||(28286374-28286470)
chr7 (17-122)||(41191936-41192042)
chr7 (1-150)||(48626298-48626448)
chr7 (1-147)||(21391425-21391572)
chr7 (1-118)||(7579107-7579225)
chr7 (1-150)||(17359246-17359396)
chr7 (7-118)||(40673248-40673358)
chr7 (21-150)||(1114119-1114249)
chr7 (17-118)||(34037162-34037264)
chr7 (1-118)||(41453240-41453358)
chr7 (1-118)||(41751747-41751865)
chr7 (1-188)||(43247443-43247630)
chr7 (1-150)||(6356351-6356500)
chr7 (1-95)||(36423489-36423584)
chr7 (41-150)||(7909351-7909461)
chr7 (53-188)||(36423657-36423791)
chr7 (53-146)||(41191751-41191844)
chr7 (53-150)||(35146764-35146861)
chr7 (53-150)||(28298107-28298204)
chr7 (1-118)||(35146933-35147042)
chr7 (36-150)||(27738935-27739049)
chr7 (56-150)||(48626128-48626222)
chr7 (53-150)||(6356573-6356670)
chr7 (53-150)||(7578937-7579034)
chr7 (53-188)||(17749963-17750097)
chr7 (53-118)||(28286214-28286279)
chr7 (59-150)||(17363532-17363621)
chr7 (55-150)||(6357055-6357150)
chr7 (55-150)||(21391255-21391350)
chr7 (53-150)||(8936914-8937011)
chr7 (53-150)||(10526598-10526695)
chr7 (57-150)||(31075485-31075578)
chr7 (59-118)||(17359479-17359538)
chr7 (53-150)||(1114333-1114430)
chr7 (57-118)||(4931565-4931626)
chr7 (53-118)||(19681592-19681657)
chr7 (53-150)||(41453070-41453167)
chr7 (55-118)||(31638040-31638103)
chr7 (53-188)||(33716872-33717005)
chr7 (59-118)||(7909460-7909519)
chr7 (53-147)||(40673076-40673169)
chr7 (82-150)||(16867772-16867840)
chr7 (59-150)||(8542793-8542883)
[»] chr2 (43 HSPs)
chr2 (1-198)||(26181935-26182132)
chr2 (1-188)||(13193016-13193203)
chr2 (1-150)||(34735578-34735728)
chr2 (1-188)||(2148121-2148308)
chr2 (5-150)||(7496218-7496364)
chr2 (1-188)||(10991879-10992066)
chr2 (1-150)||(15744522-15744672)
chr2 (1-122)||(24138741-24138864)
chr2 (1-150)||(12860602-12860752)
chr2 (1-150)||(16305090-16305240)
chr2 (5-118)||(19847557-19847671)
chr2 (1-150)||(38332769-38332919)
chr2 (1-147)||(41474150-41474297)
chr2 (1-150)||(7469231-7469381)
chr2 (1-114)||(29472343-29472457)
chr2 (1-150)||(15405991-15406141)
chr2 (1-117)||(19815939-19816056)
chr2 (1-119)||(36713684-36713801)
chr2 (1-188)||(8174120-8174307)
chr2 (53-188)||(13193276-13193410)
chr2 (38-150)||(33470195-33470308)
chr2 (7-150)||(24372208-24372352)
chr2 (56-150)||(41474373-41474467)
chr2 (53-150)||(10992139-10992236)
chr2 (53-150)||(34735408-34735505)
chr2 (53-188)||(2147913-2148048)
chr2 (53-150)||(7496045-7496142)
chr2 (53-188)||(8173913-8174047)
chr2 (21-95)||(17052177-17052253)
chr2 (59-188)||(38332974-38333102)
chr2 (55-150)||(42834487-42834582)
chr2 (53-118)||(15405853-15405918)
chr2 (56-188)||(24138096-24138227)
chr2 (53-150)||(12860445-12860542)
chr2 (53-150)||(24372032-24372129)
chr2 (56-150)||(19815769-19815863)
chr2 (56-118)||(29472533-29472595)
chr2 (53-117)||(17052342-17052406)
chr2 (53-150)||(16305313-16305410)
chr2 (53-118)||(30898589-30898654)
chr2 (53-118)||(36713873-36713938)
chr2 (56-150)||(26181765-26181859)
chr2 (57-109)||(7469458-7469510)
[»] chr4 (76 HSPs)
chr4 (1-150)||(12817871-12818021)
chr4 (8-122)||(1433513-1433628)
chr4 (1-188)||(6711991-6712178)
chr4 (1-184)||(19508648-19508831)
chr4 (1-150)||(30683763-30683913)
chr4 (1-150)||(46849904-46850054)
chr4 (1-188)||(53259373-53259560)
chr4 (11-150)||(44957454-44957594)
chr4 (1-188)||(39448723-39448910)
chr4 (1-188)||(44991513-44991700)
chr4 (1-150)||(50768886-50769036)
chr4 (7-188)||(24898217-24898398)
chr4 (1-150)||(623914-624064)
chr4 (1-150)||(8592034-8592184)
chr4 (1-118)||(15477880-15477998)
chr4 (1-188)||(19088576-19088763)
chr4 (1-188)||(25182047-25182234)
chr4 (1-150)||(33091688-33091838)
chr4 (1-122)||(36122668-36122790)
chr4 (1-188)||(37206662-37206849)
chr4 (1-114)||(38339593-38339707)
chr4 (1-188)||(43734521-43734708)
chr4 (1-118)||(52557322-52557440)
chr4 (1-188)||(53751137-53751324)
chr4 (7-150)||(14985396-14985540)
chr4 (24-150)||(21763439-21763566)
chr4 (1-150)||(16038029-16038179)
chr4 (1-150)||(42855574-42855724)
chr4 (1-122)||(41752051-41752173)
chr4 (1-150)||(43566613-43566763)
chr4 (1-150)||(50508692-50508842)
chr4 (1-150)||(53995169-53995320)
chr4 (1-118)||(23756035-23756153)
chr4 (53-188)||(36122461-36122595)
chr4 (53-150)||(53994999-53995096)
chr4 (55-150)||(37206492-37206587)
chr4 (17-122)||(41878110-41878215)
chr4 (49-150)||(12818090-12818191)
chr4 (53-188)||(43734314-43734448)
chr4 (53-188)||(6505565-6505698)
chr4 (53-122)||(14985619-14985688)
chr4 (53-150)||(16037859-16037956)
chr4 (53-150)||(39448553-39448650)
chr4 (53-150)||(52557152-52557249)
chr4 (57-150)||(53750967-53751060)
chr4 (55-188)||(38339782-38339914)
chr4 (55-188)||(43566406-43566538)
chr4 (53-122)||(6712251-6712320)
chr4 (53-118)||(19088438-19088503)
chr4 (53-118)||(24898477-24898542)
chr4 (53-150)||(42855404-42855501)
chr4 (53-122)||(46849762-46849831)
chr4 (57-150)||(50508522-50508615)
chr4 (53-122)||(53259231-53259300)
chr4 (55-118)||(23755515-23755578)
chr4 (53-119)||(8398127-8398193)
chr4 (72-188)||(25269307-25269422)
chr4 (57-122)||(41877952-41878017)
chr4 (53-150)||(44991344-44991441)
chr4 (56-188)||(30683554-30683686)
chr4 (55-188)||(20888171-20888303)
chr4 (53-198)||(41751835-41751978)
chr4 (56-150)||(1433336-1433430)
chr4 (56-188)||(50769112-50769243)
chr4 (53-150)||(8592257-8592354)
chr4 (53-118)||(15477742-15477807)
chr4 (53-128)||(21763267-21763343)
chr4 (53-122)||(19508505-19508575)
chr4 (53-118)||(623776-623841)
chr4 (7-52)||(23755659-23755704)
chr4 (53-122)||(25181905-25181974)
chr4 (69-188)||(55022312-55022429)
chr4 (1-53)||(6505771-6505823)
chr4 (53-117)||(33091551-33091615)
chr4 (76-117)||(44957668-44957709)
chr4 (71-150)||(44125776-44125855)
[»] chr3 (75 HSPs)
chr3 (1-150)||(10506183-10506333)
chr3 (1-150)||(32633300-32633450)
chr3 (1-150)||(44893805-44893955)
chr3 (1-122)||(42591877-42591999)
chr3 (1-147)||(47669327-47669474)
chr3 (1-150)||(18464521-18464671)
chr3 (1-188)||(21568774-21568960)
chr3 (1-118)||(39951454-39951572)
chr3 (1-188)||(22201644-22201831)
chr3 (5-150)||(1994407-1994553)
chr3 (1-150)||(5900658-5900808)
chr3 (1-118)||(8474081-8474199)
chr3 (1-150)||(16931671-16931821)
chr3 (1-150)||(39241423-39241573)
chr3 (1-188)||(39664419-39664606)
chr3 (1-150)||(54108137-54108287)
chr3 (1-188)||(53716322-53716508)
chr3 (7-150)||(41835167-41835311)
chr3 (1-188)||(12203786-12203973)
chr3 (1-118)||(11256200-11256318)
chr3 (1-118)||(21969726-21969844)
chr3 (1-118)||(21992162-21992280)
chr3 (1-150)||(22151910-22152060)
chr3 (1-118)||(26318417-26318535)
chr3 (1-122)||(51509354-51509476)
chr3 (16-122)||(29818270-29818377)
chr3 (5-150)||(4757732-4757878)
chr3 (21-150)||(15986300-15986430)
chr3 (7-150)||(27801554-27801698)
chr3 (16-150)||(28986392-28986526)
chr3 (1-115)||(46152715-46152828)
chr3 (1-188)||(4773271-4773457)
chr3 (1-150)||(47303254-47303401)
chr3 (1-122)||(24428660-24428782)
chr3 (1-118)||(54752260-54752378)
chr3 (53-188)||(22152133-22152267)
chr3 (53-188)||(29818465-29818599)
chr3 (53-149)||(27801777-27801873)
chr3 (53-148)||(39241646-39241741)
chr3 (53-147)||(21969917-21970011)
chr3 (53-147)||(21992353-21992447)
chr3 (53-188)||(24428855-24428989)
chr3 (53-150)||(54107967-54108064)
chr3 (53-118)||(54752451-54752516)
chr3 (53-188)||(4773530-4773664)
chr3 (53-150)||(18464744-18464841)
chr3 (53-149)||(39664250-39664346)
chr3 (55-118)||(44894030-44894093)
chr3 (53-150)||(5900488-5900585)
chr3 (54-188)||(11256392-11256525)
chr3 (53-122)||(12203644-12203713)
chr3 (57-150)||(15986526-15986619)
chr3 (54-147)||(47669548-47669641)
chr3 (53-114)||(51509220-51509281)
chr3 (53-150)||(53716581-53716678)
chr3 (1-96)||(19883358-19883454)
chr3 (53-149)||(19883528-19883624)
chr3 (55-118)||(42592074-42592137)
chr3 (56-150)||(8473911-8474005)
chr3 (53-147)||(47303087-47303181)
chr3 (53-150)||(10506013-10506110)
chr3 (53-118)||(21569033-21569098)
chr3 (53-188)||(22201904-22202038)
chr3 (53-114)||(28986261-28986322)
chr3 (53-150)||(41834991-41835088)
chr3 (53-117)||(4757592-4757656)
chr3 (62-118)||(12791473-12791529)
chr3 (62-150)||(16931903-16931991)
chr3 (56-150)||(26318247-26318341)
chr3 (64-188)||(45306991-45307114)
chr3 (53-150)||(1994234-1994331)
chr3 (53-150)||(1999393-1999490)
chr3 (53-118)||(32633162-32633227)
chr3 (56-116)||(46152904-46152964)
chr3 (71-150)||(45306897-45306976)
[»] scaffold0134 (2 HSPs)
scaffold0134 (1-188)||(14370-14557)
scaffold0134 (53-188)||(14163-14297)
[»] chr8 (46 HSPs)
chr8 (1-150)||(7949477-7949627)
chr8 (1-150)||(45077438-45077588)
chr8 (1-150)||(5435135-5435285)
chr8 (1-150)||(38588652-38588802)
chr8 (1-150)||(15871856-15872006)
chr8 (1-150)||(27473306-27473456)
chr8 (7-147)||(45276837-45276978)
chr8 (7-188)||(1432159-1432340)
chr8 (7-188)||(1869961-1870142)
chr8 (7-122)||(27669509-27669625)
chr8 (1-147)||(33295919-33296066)
chr8 (1-150)||(1646742-1646891)
chr8 (1-150)||(5152769-5152919)
chr8 (17-118)||(15048496-15048598)
chr8 (1-150)||(1651807-1651956)
chr8 (1-150)||(1740183-1740332)
chr8 (1-121)||(40048153-40048270)
chr8 (7-118)||(7535074-7535186)
chr8 (1-119)||(37569550-37569669)
chr8 (1-150)||(11173869-11174019)
chr8 (25-117)||(18298488-18298581)
chr8 (1-118)||(44594836-44594954)
chr8 (53-150)||(33819850-33819947)
chr8 (55-150)||(40660048-40660143)
chr8 (53-188)||(5434928-5435062)
chr8 (53-122)||(15871714-15871783)
chr8 (53-119)||(5152630-5152696)
chr8 (53-118)||(45276694-45276759)
chr8 (53-150)||(27669709-27669805)
chr8 (53-150)||(34470832-34470929)
chr8 (53-150)||(38588875-38588972)
chr8 (54-118)||(1870224-1870288)
chr8 (53-122)||(11707843-11707912)
chr8 (53-188)||(37569342-37569476)
chr8 (53-118)||(40048342-40048407)
chr8 (53-110)||(45077307-45077364)
chr8 (58-150)||(40660179-40660271)
chr8 (56-150)||(15048690-15048784)
chr8 (53-150)||(1646566-1646663)
chr8 (53-150)||(1740013-1740110)
chr8 (53-108)||(7534940-7534995)
chr8 (1-82)||(11707985-11708067)
chr8 (53-188)||(27473100-27473233)
chr8 (53-118)||(44594698-44594763)
chr8 (1-46)||(34470714-34470759)
chr8 (1-49)||(24659431-24659479)
[»] chr1 (58 HSPs)
chr1 (1-188)||(45052924-45053111)
chr1 (1-188)||(2064446-2064633)
chr1 (1-150)||(37304093-37304243)
chr1 (1-150)||(49140378-49140528)
chr1 (1-118)||(6798042-6798160)
chr1 (1-150)||(12481294-12481444)
chr1 (1-150)||(35612317-35612467)
chr1 (1-129)||(37585928-37586057)
chr1 (7-118)||(1762915-1763027)
chr1 (7-117)||(9006432-9006543)
chr1 (1-150)||(4330072-4330222)
chr1 (1-150)||(20306067-20306217)
chr1 (6-150)||(25995849-25995994)
chr1 (1-118)||(12127288-12127406)
chr1 (9-150)||(16023962-16024104)
chr1 (1-150)||(31703679-31703829)
chr1 (1-150)||(38127774-38127924)
chr1 (1-117)||(37284963-37285079)
chr1 (1-117)||(49643906-49644022)
chr1 (7-118)||(27400665-27400777)
chr1 (1-118)||(37576278-37576396)
chr1 (7-150)||(3089407-3089551)
chr1 (7-188)||(27547910-27548091)
chr1 (1-150)||(23476576-23476726)
chr1 (1-116)||(8762634-8762750)
chr1 (15-150)||(39486442-39486577)
chr1 (16-118)||(45843367-45843470)
chr1 (53-185)||(20306290-20306421)
chr1 (53-150)||(37304316-37304413)
chr1 (59-150)||(38000554-38000645)
chr1 (53-150)||(4696947-4697044)
chr1 (53-150)||(37576469-37576566)
chr1 (53-150)||(49140208-49140305)
chr1 (53-150)||(49643736-49643833)
chr1 (56-198)||(35612100-35612241)
chr1 (53-188)||(6797835-6797969)
chr1 (53-188)||(16024185-16024319)
chr1 (53-150)||(8760337-8760434)
chr1 (53-118)||(9006288-9006353)
chr1 (53-150)||(12481124-12481221)
chr1 (53-118)||(23476438-23476503)
chr1 (53-118)||(26707293-26707358)
chr1 (53-150)||(44322948-44323045)
chr1 (1-60)||(26707431-26707491)
chr1 (55-188)||(45052718-45052849)
chr1 (53-150)||(1762739-1762836)
chr1 (53-150)||(27547734-27547831)
chr1 (1-52)||(44322824-44322875)
chr1 (56-150)||(12127122-12127216)
chr1 (53-111)||(25996072-25996130)
chr1 (56-188)||(26723092-26723223)
chr1 (53-122)||(31703901-31703970)
chr1 (57-110)||(37585798-37585851)
chr1 (53-150)||(39486267-39486364)
chr1 (57-150)||(37284793-37284886)
chr1 (1-52)||(4697117-4697168)
chr1 (99-150)||(10831196-10831247)
chr1 (158-188)||(46592840-46592870)
[»] scaffold0220 (2 HSPs)
scaffold0220 (5-150)||(20816-20962)
scaffold0220 (53-103)||(21038-21088)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-186)||(50711-50896)
scaffold0019 (53-150)||(50541-50638)
[»] chr6 (53 HSPs)
chr6 (1-197)||(18052975-18053171)
chr6 (7-122)||(34890737-34890853)
chr6 (1-188)||(9046114-9046301)
chr6 (1-118)||(3423405-3423523)
chr6 (1-122)||(5310919-5311041)
chr6 (1-118)||(7270726-7270844)
chr6 (6-150)||(32993255-32993400)
chr6 (1-147)||(26600425-26600572)
chr6 (1-118)||(5639408-5639526)
chr6 (1-150)||(5938048-5938198)
chr6 (1-150)||(6137613-6137762)
chr6 (1-118)||(25176892-25177010)
chr6 (1-122)||(34994615-34994737)
chr6 (7-150)||(7270016-7270162)
chr6 (1-118)||(21540212-21540330)
chr6 (1-118)||(26957059-26957177)
chr6 (1-150)||(2517067-2517217)
chr6 (1-118)||(24744425-24744543)
chr6 (1-118)||(31247213-31247331)
chr6 (1-118)||(6236156-6236274)
chr6 (1-150)||(21856790-21856940)
chr6 (1-118)||(31237843-31237961)
chr6 (53-188)||(32753461-32753595)
chr6 (31-150)||(6532257-6532377)
chr6 (1-110)||(35167727-35167837)
chr6 (53-150)||(3423235-3423332)
chr6 (53-118)||(5311114-5311179)
chr6 (53-188)||(5937841-5937975)
chr6 (53-188)||(18053241-18053375)
chr6 (53-150)||(24744609-24744706)
chr6 (53-150)||(31238034-31238132)
chr6 (53-150)||(26600635-26600732)
chr6 (1-188)||(32753205-32753388)
chr6 (53-188)||(34890932-34891066)
chr6 (62-150)||(26957258-26957346)
chr6 (53-150)||(978480-978577)
chr6 (53-150)||(6235986-6236083)
chr6 (53-150)||(21856620-21856717)
chr6 (53-150)||(34994445-34994542)
chr6 (53-150)||(35167555-35167652)
chr6 (53-150)||(15932844-15932941)
chr6 (53-116)||(9046374-9046437)
chr6 (59-118)||(25176760-25176819)
chr6 (53-147)||(31247404-31247498)
chr6 (55-149)||(6137444-6137538)
chr6 (56-150)||(7270920-7271014)
chr6 (53-118)||(7270241-7270306)
chr6 (60-150)||(10412796-10412886)
chr6 (57-119)||(32993111-32993173)
chr6 (53-94)||(5639294-5639335)
chr6 (56-150)||(2517293-2517387)
chr6 (80-118)||(14276496-14276534)
chr6 (69-150)||(3035945-3036027)
[»] scaffold0037 (3 HSPs)
scaffold0037 (1-150)||(45821-45971)
scaffold0037 (53-150)||(56424-56521)
scaffold0037 (53-150)||(63549-63646)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-118)||(82093-82211)
scaffold0032 (53-150)||(81923-82020)
[»] chr5 (30 HSPs)
chr5 (1-150)||(24040320-24040472)
chr5 (7-118)||(2183040-2183152)
chr5 (7-188)||(32288318-32288498)
chr5 (1-150)||(9989388-9989538)
chr5 (7-150)||(25567229-25567373)
chr5 (1-119)||(34264583-34264702)
chr5 (1-150)||(37424497-37424650)
chr5 (1-150)||(36440435-36440585)
chr5 (1-150)||(35570015-35570165)
chr5 (16-117)||(11316056-11316158)
chr5 (1-150)||(38958959-38959108)
chr5 (53-150)||(9989611-9989708)
chr5 (53-188)||(27186161-27186295)
chr5 (53-198)||(24040103-24040247)
chr5 (1-122)||(27185967-27186088)
chr5 (53-188)||(36440228-36440362)
chr5 (56-150)||(16860368-16860462)
chr5 (53-122)||(37424355-37424424)
chr5 (55-150)||(11316244-11316339)
chr5 (53-150)||(2183231-2183328)
chr5 (54-150)||(39325477-39325573)
chr5 (55-122)||(32288171-32288237)
chr5 (56-150)||(35569840-35569934)
chr5 (55-150)||(39325645-39325740)
chr5 (53-119)||(25182941-25183007)
chr5 (53-150)||(38958789-38958886)
chr5 (58-150)||(29199017-29199109)
chr5 (7-51)||(16860661-16860705)
chr5 (1-51)||(16860538-16860588)
chr5 (53-86)||(34264477-34264510)
[»] scaffold0340 (2 HSPs)
scaffold0340 (1-116)||(18372-18488)
scaffold0340 (53-198)||(18561-18705)
[»] scaffold0029 (2 HSPs)
scaffold0029 (5-150)||(72827-72973)
scaffold0029 (53-150)||(73049-73146)
[»] scaffold0182 (2 HSPs)
scaffold0182 (6-118)||(19805-19918)
scaffold0182 (53-118)||(19996-20061)
[»] scaffold0003 (4 HSPs)
scaffold0003 (1-113)||(349175-349288)
scaffold0003 (53-122)||(113654-113723)
scaffold0003 (53-122)||(349361-349430)
scaffold0003 (1-52)||(113530-113581)
[»] scaffold0221 (2 HSPs)
scaffold0221 (1-150)||(8493-8643)
scaffold0221 (53-150)||(8716-8813)
[»] scaffold0115 (2 HSPs)
scaffold0115 (21-150)||(21577-21706)
scaffold0115 (74-150)||(22462-22538)
[»] scaffold0186 (2 HSPs)
scaffold0186 (1-118)||(24259-24377)
scaffold0186 (59-150)||(24456-24547)
[»] scaffold0072 (2 HSPs)
scaffold0072 (1-122)||(15546-15663)
scaffold0072 (53-115)||(15736-15798)
[»] scaffold0246 (2 HSPs)
scaffold0246 (1-119)||(6094-6210)
scaffold0246 (53-118)||(6283-6348)
[»] scaffold0260 (1 HSPs)
scaffold0260 (56-150)||(14256-14350)


Alignment Details
Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 28298034 - 28297719
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  28298034 aataccttaactagtcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 28297935  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaatacataaaggacn 199  Q
    || |||||||| ||||||| |||  ||||| | ||||||||||||||||||       ||||||||| |||||| ||| ||||||||||  || || |      
T  28297934 aatgactaaatatagtaacggtgagaaacttagagaactgaaataaatcaa-tttttagttagaggaccaatctaataccaattaaatagttagagaa-- 28297838  T
Q  200 nnnnnnnnttagccttaaatttattgttaaagggcaatgtgttgtcgcttcaccaaccgctcattcctatggc----acaataacaaaaacacatattta 295  Q
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    |||||||||||||||||||||||    
T  28297837 aaaaaaaattagccttaaatttattgttaaagggcaatgtgttgtcgcttcaccaacctctcattcctatggcacaaacaataacaaaaacacatattta 28297738  T
Q  296 agttgatatatgtgactct 314  Q
    ||||||||| |||||||||    
T  28297737 agttgatatgtgtgactct 28297719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 44332754 - 44332904
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | |    
T  44332754 aataccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacagaaactctaacgtttatttgaataaaactaacaga 44332853  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  44332854 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 44332904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 6356980 - 6356793
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| | |    
T  6356980 aataccttaacaaggaatagaaccaaaatgatactaataaataaagttagaggacccacataacacaaacactaacatttatttgaataaaactaacaga 6356881  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||||||||||| ||| |||||| | || || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  6356880 aaggactaaatgtagtaacggtgaaaaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 6356793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8542714 - 8542564
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| | |    
T  8542714 aataccttaacaaggaatatgaccaaaatgatgctaataaataaagttagaagacccacacaacacaaactctgacgtttatttgaataaaactaacaga 8542615  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || |||||||||||||||    
T  8542614 aaggactaaatgtagtaacggtgagaaacttagaggactgaaataaatcaa 8542564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 10526506 - 10526339
Alignment:
Q  21 gaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaaca 119  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||     
T  10526506 gaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacg 10526407  T
Q  120 gtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    |||  ||||| | || || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  10526406 gtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 10526339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 8937084 - 8937234
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagaga-cccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| | |    
T  8937084 aataccttaacaaggaatatgaccaacatgatattaataaataaagttagagaacccacataacacaaaccataacgtttatttgaataaaactaacaga 8937183  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  8937184 aaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 8937234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31638178 - 31638296
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||  |||||||||||||||||||||||||| |    
T  31638178 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggatccacatgacacaaaccataacgtttatttgaataaaactaataga 31638277  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  31638278 aaggactaaatgtagtaac 31638296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 33716803 - 33716653
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| | |    
T  33716803 aataccttaacaagacataggaccaaaatgatactaataaataaagttagaggacccacataatacaaactctaacgtttatttgaataaaactaacaga 33716704  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  33716703 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 33716653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 19681736 - 19681880
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| | ||| |||    
T  19681736 ttaacaagaaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacatttatttgaataaaactaagagaaatgac 19681835  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||| ||| |||||| | || || ||||||||||||    
T  19681836 taaatgtagtaacggtgaaaaacttagaggaccgaaataaatcaa 19681880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 28286374 - 28286470
Alignment:
Q  23 ccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28286374 ccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaatataaagaactaaatgtagtaac 28286470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 41191936 - 41192042
Alignment:
Q  17 atatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagt 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||    
T  41191936 atatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaaagactaaatgtagt 41192035  T
Q  116 aacagtg 122  Q
    |||||||    
T  41192036 aacagtg 41192042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 48626298 - 48626448
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||| | |    
T  48626298 aataccttaacaaggaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaatcctaacgtttatttgaataaaactaacaga 48626397  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||| ||| ||   ||||| |||| ||  |||||||||||    
T  48626398 aaggactaaatgtagcaacggtcagaaacttaaaggaccaaaataaatcaa 48626448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21391425 - 21391572
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||| | |    
T  21391425 aataccttaacaaggcataagatcaaaatgatactaataaataaagttagatgatccacataacacaaacactaacatttatttgaataaaactaacaga 21391524  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    |||||||||||||||||| ||||  ||||| | || || |||||||||    
T  21391525 aaggactaaatgtagtaagagtgagaaacttagaggaccgaaataaat 21391572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7579107 - 7579225
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||||||||| |||||| |||    
T  7579107 aataccttaacaaggaataagaccaaaatgatactaataaataaagttagaggacccacataacaaaaaccataacgtttatttgaatataactaaaata 7579206  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  7579207 aaggactaaatgtagtaac 7579225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17359396 - 17359246
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||  ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| | |    
T  17359396 aataccttaacaagaaataggaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaatgtttatttgaataaaactaacaga 17359297  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  17359296 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 17359246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 40673248 - 40673358
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  40673248 ttaacaaggcatatgactaaaat--tactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacataaatgac 40673345  T
Q  106 taaatgtagtaac 118  Q
    ||||| |||||||    
T  40673346 taaatatagtaac 40673358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 1114249 - 1114119
Alignment:
Q  21 gaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaaca 119  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||     
T  1114249 gaccacaatgatgctaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatttagtaact 1114150  T
Q  120 gtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||  ||||| | || || ||||||||||||    
T  1114149 gtgtgaaacttagaggaccgaaataaatcaa 1114119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 34037162 - 34037264
Alignment:
Q  17 atatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagt 115  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||| |||    
T  34037162 atatgaccaaaatgatattaataaataaagttagaggacccacataacataaactctaacgtttatttgaataaaactaacaaaaaggactaaatgcagt 34037261  T
Q  116 aac 118  Q
    |||    
T  34037262 aac 34037264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 41453240 - 41453358
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| | |    
T  41453240 aataccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacatttatttgaataaaactaacaga 41453339  T
Q  100 aaggactaaatgtagtaac 118  Q
    || ||||||||||||||||    
T  41453340 aatgactaaatgtagtaac 41453358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41751865 - 41751747
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||| ||||||||| ||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| | |    
T  41751865 aataacttaacaagacataggaccaaaataatactaataaataaagttagaagatccacataacacaaaccctaacgtttatttgaataaaactaacaaa 41751766  T
Q  100 aaggactaaatgtagtaac 118  Q
    ||||| |||||||||||||    
T  41751765 aaggattaaatgtagtaac 41751747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 43247630 - 43247443
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||||||||||||| |    
T  43247630 aataccttaacaatgcataagaccaaaatgatactaataaataaagttagaggacccacataacataaac-ctaatgtttatttgaataaaactaataga 43247532  T
Q  100 aa-ggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || ||| ||||||||||||| |||  ||||| | || |  ||||||||||||       ||||||||| ||||| |||||||||||||||    
T  43247531 aagggagtaaatgtagtaacggtgagaaacttagaggatcgaaataaatcaa-tttttagttagaggaccaatccgatatcaattaaata 43247443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 6356500 - 6356351
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||| ||  ||| ||||||||||||||||||||||||||||||| |||||| |||||||||| |||||| ||||||||||||||||||| | |    
T  6356500 aatatcttaacgagatataggaccaaaatgatactaataaataaagttagaggacccatataacacaaaatctaac-tttatttgaataaaactaacaaa 6356402  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| ||  |||||| | || || ||||||||||||    
T  6356401 aatgactaaatgtagtaacggtaaaaaacttagaggaccgaaataaatcaa 6356351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36423584 - 36423489
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaa 95  Q
    |||| |||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  36423584 aataccttaaccaggtataggaccaaaatgatactaataaataaagttagaggacccacataacacaaatcctaacgtttatttgaataaaactaa 36423489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 7909461 - 7909351
Alignment:
Q  41 ataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactg 139  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||| ||| |||||| | || || |    
T  7909461 ataaagttagaggatccacataacacaaactataacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgaaaaacttagaggaccg 7909362  T
Q  140 aaataaatcaa 150  Q
    |||||||||||    
T  7909361 aaataaatcaa 7909351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 36423657 - 36423791
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||  ||||| | || || ||||||||||||      
T  36423657 acccacataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtaataacggtgagaaacttagaggaccgaaataaatcaa-t 36423755  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  36423756 ttttagttagaggaccaatctgataccaattaaata 36423791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 41191844 - 41191751
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaa 146  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | ||||||||||||||    
T  41191844 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagagaactgaaataaa 41191751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 35146861 - 35146764
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||||  ||||| | || || ||||||||||||    
T  35146861 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 35146764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 28298107 - 28298204
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | ||| |||||||||||||||| |||  ||||| | ||||  ||||||||||||    
T  28298107 acccacataacacaaactctaacgtttatttgaataaaattaacagaaatgactaaatgtagtaacggtgagaaacttagagaatcgaaataaatcaa 28298204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35146933 - 35147042
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagagacccacataacacaaactctaacgtttatttgaataaaactaatataa 100  Q
    |||| |||||||||| ||||||||||||||||| | |||||||||||||||||        ||||||||  |||| ||||||||||||||||||| | ||    
T  35146933 aataccttaacaaggaatatgaccaaaatgatattgataaataaagttagaga--------acacaaaccataacatttatttgaataaaactaacagaa 35147024  T
Q  101 aggactaaatgtagtaac 118  Q
    ||||||||||||||||||    
T  35147025 aggactaaatgtagtaac 35147042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 27738935 - 27739049
Alignment:
Q  36 aataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaag 134  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| | ||| || ||||| ||||||| |||  ||||| ||||    
T  27738935 aataaataaagttagaggacccacataacacaaaccttaacgtttatttgaataaaactaacagaaa-gattaaatatagtaacggtgagaaactaaaag 27739033  T
Q  135 aactgaaataaatcaa 150  Q
     || ||||||||||||    
T  27739034 gaccgaaataaatcaa 27739049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 48626222 - 48626128
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||   |||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  48626222 cacataacacaaatcataacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 48626128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 6356573 - 6356670
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||| |||||||  | |||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  6356573 acccacatagcacaaaccttgacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 6356670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 7579034 - 7578937
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||| ||||||| ||  ||||| | || || ||||||||||||    
T  7579034 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgaagtaacattgagaaacttagaggaccgaaataaatcaa 7578937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 17750097 - 17749963
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||| |||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||||| |||  ||||| | || || ||||||||| ||      
T  17750097 acccatataacacaaaccataacgtttatttgaataaaactaacataaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaattaa-t 17749999  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||| | |||||||||||||||||||||    
T  17749998 ttttagttagagaaccaatctgatatcaattaaata 17749963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 28286279 - 28286214
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  28286279 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 28286214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 17363532 - 17363621
Alignment:
Q  59 ataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||| ||  ||||| |||| || ||||||||||||    
T  17363532 ataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacattg--aaacttaaaggaccgaaataaatcaa 17363621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 6357055 - 6357150
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||| ||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  6357055 ccacatagcacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaactgtgagaaacttagaggaccgaaataaatcaa 6357150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 21391350 - 21391255
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||| |||||||||||||| | |||  ||||| | || || ||||||||||||    
T  21391350 ccacataacacaaactctaacgtttatttgaataaaattaacagaaaagactaaatgtagtagcggtgagaaacttagaggaccgaaataaatcaa 21391255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 8937011 - 8936914
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||| ||||||||||||||| ||||  ||||| | || ||  |||||||||||    
T  8937011 acccacataacacaaaccctaacatttatttgaataaaactaacagaaatgactaaatgtagtaaaagtgagaaacttagaggaccaaaataaatcaa 8936914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 10526598 - 10526695
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||   |||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  10526598 acccacataacacaaaacttaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 10526695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 31075485 - 31075578
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||  |||||||||||||||||||||| || | |||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  31075485 acataacacaaatcctaacgtttatttgaataaaacaaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 31075578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 17359479 - 17359538
Alignment:
Q  59 ataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  17359479 ataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 17359538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 1114333 - 1114430
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| | ||| || ||||||||||||| |||  ||||| | || ||  |||||||||||    
T  1114333 acccatataacacaaaccctaacgtttatttgaataaaactaacagaaaagagtaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 1114430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 4931565 - 4931626
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||| ||| |||||||    
T  4931565 acataacacaaattctaacgtttatttgaataaaactaacagaaaggactgaatatagtaac 4931626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 19681657 - 19681592
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||| |||||||||||| || ||||||||| | |||||| |||||||||||||    
T  19681657 acccacataacacaaaccctaacgtttattcgactaaaactaacagaaaggaataaatgtagtaac 19681592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 41453167 - 41453070
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||  ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  41453167 acccatataacacaaatcctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 41453070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 31638103 - 31638040
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||| |||||||||| ||||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  31638103 ccacgtaacacaaaccctaacgtttatatgaataaaactaacagaaatgactaaatgtagtaac 31638040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 33716872 - 33717005
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||| ||| |||||||||||||||| |||| ||| ||||| |||| |||||||||||| ||  ||||| |||  || ||||||||| ||      
T  33716872 acccacataacaccaaccctaacgtttatttgaacaaaattaacataaatgact-aatgtagtaacaatgagaaacttaaatgaccgaaataaattaa-t 33716969  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         |||||| |||||||| |||||||||||||||    
T  33716970 ttttagttagatgatcaatccgatatcaattaaata 33717005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 7909460 - 7909519
Alignment:
Q  59 ataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||  ||||||||||||||||||||||||| | ||| ||||||||||| ||||    
T  7909460 ataacacaaatcctaacgtttatttgaataaaactaacagaaatgactaaatgtactaac 7909519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 40673169 - 40673076
Alignment:
Q  53 acccacataacacaaactctaacgt--ttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    ||||||||||||||||  |||||||  |||||||||   |||||| | ||||||||||||||||||||| || |||||| | |||||| ||||||||    
T  40673169 acccacataacacaaatcctaacgtgtttatttgaa---aactaacagaaaggactaaatgtagtaacaatgaaaaacttacagaactcaaataaat 40673076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 16867840 - 16867772
Alignment:
Q  82 ttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||| | ||| |||||||||||||||||||   ||||| | || |||||||||||||||    
T  16867840 ttgaataaaactaacagaaatgactaaatgtagtaacagtaagaaacttagaggactgaaataaatcaa 16867772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 8542793 - 8542883
Alignment:
Q  59 ataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| ||||| ||||||||||||||||||  | |||||| |||||||||| ||||||  ||||| | || ||  |||||||||||    
T  8542793 ataacacaaaccctaacatttatttgaataaaactac-agaaaggattaaatgtagtcacagtgagaaacttagaggaccaaaataaatcaa 8542883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 8e-55; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 26181935 - 26182132
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  26181935 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacaga 26182034  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaatacataaaggac 198  Q
    |||||||||||||||||||||||  ||||| | ||  | ||||||||||||       ||||||||| ||||| |||||||||||||||  ||||||||    
T  26182035 aaggactaaatgtagtaacagtgagaaacttagagggccgaaataaatcaa-tttttagttagaggaccaatccgatatcaattaaataattaaaggac 26182132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 13193203 - 13193016
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| | |    
T  13193203 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggaccaacataacacaaactctaacgtttatttgaataaaactaacaga 13193104  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || ||||||||||||||||||||  ||||| | || || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  13193103 aaagactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 13193016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 34735578 - 34735728
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  34735578 aataccttaacaaggaataggaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacaga 34735677  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| |||||||||||  ||||| |||| || ||||||||||||    
T  34735678 aaggactaaatatagtaacagtgagaaacttaaaggaccgaaataaatcaa 34735728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 2148121 - 2148308
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | |    
T  2148121 aataccttaacaagacatatgaccaaaatgatactaataaataaagttagaggacccacataacagaaactctaacgtttatttgaataaaactaacaga 2148220  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || ||||||||||||||||  ||  ||||| |||| ||  |||||||||||       ||||||||||||||| |||| ||||||||||    
T  2148221 aatgactaaatgtagtaacgatgagaaacttaaaggaccaaaataaatcaa-tttttagttagaggatcaatccgataccaattaaata 2148308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 7496218 - 7496364
Alignment:
Q  5 tcttaacaaggcatatgaccaaaatgatactaataaataaagttagaga-cccacataacacaaactctaacgtttatttgaataaaactaatataaagg 103  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | |||||    
T  7496218 tcttaacaaggaataggaccaaaatgatgctaataaataaagttagagaacccacataacacaaaccctaacgtttatttgaataaaactaacagaaagg 7496317  T
Q  104 actaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||| |||  ||||| |||| || ||||||||||||    
T  7496318 actaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa 7496364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 10992066 - 10991879
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||| |||| |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | |    
T  10992066 aatatcttagcaagacataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaactgtaacgtttatttgaataaaactaacaga 10991967  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || |||||||||||||||| ||| |||| | | || || ||||||||||||       |||||||||||||||||||| ||||||||||    
T  10991966 aatgactaaatgtagtaacggtgaaaaatttagaggaccgaaataaatcaa-tttttagttagaggatcaatctgataccaattaaata 10991879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15744672 - 15744522
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  15744672 aataccttaacaaggaatatgaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 15744573  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||   ||||| | || || ||||||||||||    
T  15744572 aaggactaaatgtagtaacagttagaaacttagaggaccgaaataaatcaa 15744522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 24138741 - 24138864
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaata-t 98  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |      
T  24138741 aatatcttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 24138840  T
Q  99 aaaggactaaatgtagtaacagtg 122  Q
    ||| ||||||||||||||||||||    
T  24138841 aaaagactaaatgtagtaacagtg 24138864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 12860602 - 12860752
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| | |    
T  12860602 aataccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccgtaacgtttatttgaataaaactaacaga 12860701  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| ||| |||||| | || || ||||||||||||    
T  12860702 aaggactaaatgtagtaacggtgaaaaacttagaggaccgaaataaatcaa 12860752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 16305240 - 16305090
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  16305240 aatatcttaacaagacataagaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 16305141  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||| ||||||||||||||  |||  ||||| | || || ||||||||||||    
T  16305140 aagaactaaatgtagtaattgtgagaaacttagaggaccgaaataaatcaa 16305090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 19847557 - 19847671
Alignment:
Q  5 tcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaagg 103  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||||    
T  19847557 tcttaacaaggaatatgaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaagg 19847656  T
Q  104 actaaatgtagtaac 118  Q
    |||||||||||||||    
T  19847657 actaaatgtagtaac 19847671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 38332919 - 38332769
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||| | |    
T  38332919 aatatcttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataaaacaaaccctaacatttatttgaataaaactaacaga 38332820  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| ||||||| |||  ||||| | || || ||||||||||||    
T  38332819 aaggactaaatatagtaacggtgagaaacttagaggaccgaaataaatcaa 38332769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 41474297 - 41474150
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||    
T  41474297 aataccttaacaaggcataggatcaaaatgatactaataaataaagttagatgacccacataacacaaacactaacgtttatttaaataaaactaacata 41474198  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    || ||||||||||| ||||||||  ||||| | || || |||||||||    
T  41474197 aaagactaaatgtaataacagtgagaaacttagaggaccgaaataaat 41474150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7469381 - 7469231
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  7469381 aataccttaacaaggaataggaccaaaatgatactagtaaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 7469282  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  7469281 aaagactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 7469231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29472457 - 29472343
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| | |    
T  29472457 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggactcacataacacaaaccttaacgtttatttgaataaaactaacaga 29472358  T
Q  100 aaggactaaatgtag 114  Q
    |||||||||||||||    
T  29472357 aaggactaaatgtag 29472343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 15405991 - 15406141
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||||||||||||| |||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||| | |    
T  15405991 aataccttaacaagacatatgaccaaaataatactaataaataaagttagaggactcacataacacaaaccctaacgtttatttgaataaaactaacaga 15406090  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || || ||||||||||||||||   ||||| | || || ||||||||||||    
T  15406091 aaagattaaatgtagtaacagtaagaaacttagaggaccgaaataaatcaa 15406141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19815939 - 19816056
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||  | |    
T  19815939 aataccttaacaaggaatatgagcaaaatgatactaataaataaagtcagaggacccacataacacagactctaacgtttatttgaataaaactagcaga 19816038  T
Q  100 aaggactaaatgtagtaa 117  Q
    ||||||||||||||||||    
T  19816039 aaggactaaatgtagtaa 19816056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 36713801 - 36713684
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||||||  ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  36713801 aataccttaacaaggcatagaaccaaaatga--ctaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacaga 36713704  T
Q  100 aaggactaaatgtagtaaca 119  Q
    || |||||||||||||||||    
T  36713703 aaagactaaatgtagtaaca 36713684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 8174120 - 8174307
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||  | ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  8174120 aataccttaacaaggaataaaaacaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 8174219  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || |||||||||||| ||| |||  ||| | |||| || ||||||||| ||       ||||||||| |||||||||| ||||||||||    
T  8174220 aatgactaaatgtagaaacggtgagaaatttaaaggaccgaaataaattaa-tttttagttagaggaccaatctgataccaattaaata 8174307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 13193276 - 13193410
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||  ||||| | || || ||||||||||||      
T  13193276 acccacataacacaaactctaacgtttatttgaataaaactaatagaaaagactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-t 13193374  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         |||||||||||||||||||| ||||||||||    
T  13193375 ttttagttagaggatcaatctgataccaattaaata 13193410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 33470195 - 33470308
Alignment:
Q  38 taaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaa 136  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || |    
T  33470195 taaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagagga 33470294  T
Q  137 ctgaaataaatcaa 150  Q
    | ||||||||||||    
T  33470295 ccgaaataaatcaa 33470308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 24372208 - 24372352
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||||| | ||| |||    
T  24372208 ttaaaaaggaataggaccaaaatgatactaataaataaagttagaggacccacataacacaaatcctaatgtttatttgaataaaactaacagaaatgac 24372307  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||| |||  ||||| | || ||  |||||||||||    
T  24372308 taaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 24372352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 41474373 - 41474467
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||||| || || ||||||||||||    
T  41474373 cacataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaactcagaggaccgaaataaatcaa 41474467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 10992139 - 10992236
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  10992139 acccacataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 10992236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 34735505 - 34735408
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  34735505 acccacataacacaaaccctaacgtttatttgaataaaactaatagaaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 34735408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 2148048 - 2147913
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | ||  | |||||||||||       
T  2148048 acccacataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaggcccgaaataaatcattt 2147949  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| ||||||||||  |||||||||    
T  2147948 ttttagttagaggaccaatctgatactaattaaata 2147913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 7496142 - 7496045
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||  ||||| | || || ||||||||||||    
T  7496142 acccatataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatatagtaacagtgagaaacttagaggaccgaaataaatcaa 7496045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 8174047 - 8173913
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||| |||||||| |||||||||||| ||| | |||||||||||||||||||| |||  ||||| | || || ||||||||||||      
T  8174047 acccacataacacaaaccctaacgttcatttgaataaaattaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-t 8173949  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||||||||||||||    
T  8173948 ttttagttagaggaccaatctgatatcaattaaata 8173913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 17052253 - 17052177
Alignment:
Q  21 gaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacg-tttatttgaataaaactaa 95  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  17052253 gaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgttttatttgaataaaactaa 17052177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 38332974 - 38333102
Alignment:
Q  59 ataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnng 158  Q
    ||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||  ||||| | || || ||||||||||||       |    
T  38332974 ataacacaaatcctaacgtttatttgaataaaactaatagaaatgactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa-tttttag 38333072  T
Q  159 ttagaggatcaatctgatatcaattaaata 188  Q
    |||||||||||||| |||| ||||||||||    
T  38333073 ttagaggatcaatccgataccaattaaata 38333102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 42834582 - 42834487
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||| ||||  ||||| | ||||| ||||||||||||    
T  42834582 ccacataacacaaaccctaacgtttatttgaataaaactaacagaaaagactaaatgtagtaatagtgagaaacttagagaaccgaaataaatcaa 42834487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 15405918 - 15405853
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  15405918 acccacataacacaaactctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 15405853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 24138227 - 24138096
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnn 155  Q
    |||||||||||||| ||||| ||||||||||||||||||| | |||||||||||||||||||| |||  ||||| |  | || ||||||||||||         
T  24138227 cacataacacaaaccctaacatttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagtggaccgaaataaatcaa-tttt 24138129  T
Q  156 nngttagaggatcaatctgatatcaattaaata 188  Q
      ||||||||| |||||||||| ||||||||||    
T  24138128 tagttagaggaccaatctgataccaattaaata 24138096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 12860542 - 12860445
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  12860542 acccatataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 12860445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 24372129 - 24372032
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||| |||||| ||||||||||||||||||||||||| | |||| ||||||||||||||| |||  ||||| | || || ||||||||||||    
T  24372129 acccacataatacaaaccctaacgtttatttgaataaaactaacagaaagaactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 24372032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 19815863 - 19815769
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||   |||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  19815863 cacataacacaaatcataacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 19815769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 29472533 - 29472595
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  29472533 cacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 29472595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 17052342 - 17052406
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaa 117  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| | ||| |||||||||||||||    
T  17052342 acccacataacacaaacactaacgtttatttgaatgaaactaacagaaatgactaaatgtagtaa 17052406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 16305313 - 16305410
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||  ||||  |||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || | |||||||||||||    
T  16305313 acccacataacacaaaccataactcttatttgaataaaactaacaaaaaagactaaatgtagtaacggtgagaaacttagaggattgaaataaatcaa 16305410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 30898589 - 30898654
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||| ||||||||||| | ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  30898589 acccatataacacaaacccgaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 30898654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 36713873 - 36713938
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||| |||||| ||| |||||    
T  36713873 acccacataacacaaactctaacgtttatttgaataaaacaaacagaaatgactaagtgtggtaac 36713938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 26181859 - 26181765
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||  ||| |||||||||||||||||||| | |||||| || |||||||||| |||  ||||| | || || ||||||||||||    
T  26181859 cacataacacaaaccttaaggtttatttgaataaaactaacagaaaggaatatatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 26181765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 7469458 - 7469510
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaa 109  Q
    |||||||||||||  |||||||||||||||||||||||| ||||| |||||||    
T  7469458 acataacacaaaccataacgtttatttgaataaaactaacataaatgactaaa 7469510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 12818021 - 12817871
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |    
T  12818021 aataccttaacaaggcatatgaccaaaatgatactgataaataaagttacaggacccacataacacaaactctaacgtttatttgaataaaactaataga 12817922  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||| ||||||||||||||||||  ||||| |||| || ||||||||||||    
T  12817921 aagggctaaatgtagtaacagtgataaacttaaaggaccgaaataaatcaa 12817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 1433513 - 1433628
Alignment:
Q  8 taacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggact 106  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  1433513 taacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaatagaaaagact 1433612  T
Q  107 aaatgtagtaacagtg 122  Q
    ||||||||||||||||    
T  1433613 aaatgtagtaacagtg 1433628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 6712178 - 6711991
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||||||||| |||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| |||    
T  6712178 aatatcttaataaggcacaggaccaaaatgatactaataaataaagttagaggacccacataacagaaaccctaacgtttatttgaataaaactaacata 6712079  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  6712078 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 6711991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 19508648 - 19508831
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  19508648 aataccttaacaaggcatatgaccaaaatcatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacaga 19508747  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaatta 184  Q
    ||||||||||||||||||  |||  |||||   || || ||||||||||||       ||||||||| |||||||||||||||||    
T  19508748 aaggactaaatgtagtaagggtgagaaacttggaggaccgaaataaatcaa-tttttagttagaggaccaatctgatatcaatta 19508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 30683763 - 30683913
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  30683763 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 30683862  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||| |||| |||  ||||| | || || ||||||||||||    
T  30683863 aaggactaaatgtaataacggtgcgaaacttagaggaccgaaataaatcaa 30683913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 46849904 - 46850054
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  46849904 aatatcttaacaaggaataagaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 46850003  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  46850004 aaggactaaatgtagtaacggtgataaacttagaggaccgaaataaatcaa 46850054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 53259373 - 53259560
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| | |    
T  53259373 aataccttaacaaggcataagaccaaaatgatactaataaataaagttagaggactcacataacacaaactctaacgtgtatttgaataaaactaacaga 53259472  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||       |||||||||||||||||||| ||||||||||    
T  53259473 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggatcaatctgataccaattaaata 53259560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 44957594 - 44957454
Alignment:
Q  11 caaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  44957594 caaggcatatgaccaaaatgatactaataaataaagttagaggatccacataacacaaaccctaacgtttatttgaataaaactaacataaaggactaaa 44957495  T
Q  110 tgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || ||||||||||  ||||| | || || ||||||||||||    
T  44957494 tgcagtaacagtgagaaacttagaggaccgaaataaatcaa 44957454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 39448723 - 39448910
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| | |    
T  39448723 aataccttaacaaggcataagaccaaaatgatgctaataaataaagttagaggacccagataacacaaactctaacgtttatttgaataaaactaacaaa 39448822  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||       ||||||||||||||| |||| ||||||||||    
T  39448823 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggatcaatccgataccaattaaata 39448910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 44991513 - 44991700
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| | |    
T  44991513 aataccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaacaaaactaacaaa 44991612  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || ||||||||||| ||||||||  ||||| | || || ||||||||||||       ||||||||||||||| |||| ||||||||||    
T  44991613 aaagactaaatgtaataacagtgagaaacttagaggaccgaaataaatcaa-ttttcagttagaggatcaatccgataccaattaaata 44991700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 50769036 - 50768886
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| |    
T  50769036 aataccttaacaaggcataagaccaaaatgatactaataaataaagttagaggatccacataacacaaaccctaacgtttatttgaataaaactaataga 50768937  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||| ||||||||||||||| |||  ||||| | || || ||||||||||||    
T  50768936 aagtactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 50768886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 24898398 - 24898217
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | |||||||    
T  24898398 ttaacaagacatgtgaccaaaatgatactaataaataaagttagaggacgcacataacacaaactctaacgtttatttgaataaaactaacagaaaggac 24898299  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||||| |||  ||||| | || || ||||||||||||        |||||||||||||| |||| ||||||||||    
T  24898298 taaatgtagtaacggtgagaaacttagaggaccgaaataaatcaatttttaa-ttagaggatcaatccgataccaattaaata 24898217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 623914 - 624064
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||| | |    
T  623914 aatatcttaacaaggaataagaccaaaatgatgctaataaataaagttagaggatccacataacacaaactctaacatttatttgaataaaactaacaga 624013  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||| ||  ||||| | || || ||||||||||||    
T  624014 aaggactaaatgtagtaacaatgagaaacttagaggaccgaaataaatcaa 624064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8592184 - 8592034
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  8592184 aataccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 8592085  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  8592084 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 8592034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15477880 - 15477998
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||| | |    
T  15477880 aataccttaacaaggcatatgaccaaaatgatactaataaacaaagttagaggacccacgtaacacaaactctaacgtttatttgaataaaactaacaga 15477979  T
Q  100 aaggactaaatgtagtaac 118  Q
    || ||||||||||||||||    
T  15477980 aaagactaaatgtagtaac 15477998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 19088576 - 19088763
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  19088576 aataccttaacaaggaataagatcaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 19088675  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || |||||||| |||||||||||  ||||| | || || ||||||||||||       |||||||||| ||||||||| ||||||||||    
T  19088676 aatgactaaatatagtaacagtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggattaatctgataccaattaaata 19088763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 25182047 - 25182234
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||| ||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| | |    
T  25182047 aatatcttaacaaggaataggaccaaaatgatgttaataaataaagttagaggacccacataacacaaactcaaacgtttatttgaataaaactaacaga 25182146  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||       |||||||||||||||||||| ||| ||||||    
T  25182147 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggatcaatctgataccaactaaata 25182234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 33091688 - 33091838
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  33091688 aataccttaacaaagcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 33091787  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | |  |||||||||||||||    
T  33091788 aatgactaaatgtagtaacggtgagaaacttagatgactgaaataaatcaa 33091838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 36122668 - 36122790
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||||||||||||||| |    
T  36122668 aataccttaacaaggcatatgaccaaaatgatactaataaatatagttagaggacctatataacacaaactctaacgtttatttgaataaaactaataga 36122767  T
Q  100 aaggactaaatgtagtaacagtg 122  Q
    || ||||||||||| ||||||||    
T  36122768 aatgactaaatgtaataacagtg 36122790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 37206662 - 37206849
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||| | |    
T  37206662 aataccttaacaaagaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaatcctaacgtttatttgaataaaactaacaga 37206761  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || || |||||||||||||  || |||||| | ||||| ||||||||||||       |||||||||  ||||||||||||||||||||    
T  37206762 aaagattaaatgtagtaacgatgaaaaacttagagaaccgaaataaatcaa-tttttagttagaggactaatctgatatcaattaaata 37206849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38339707 - 38339593
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||   |    
T  38339707 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaaccga 38339608  T
Q  100 aaggactaaatgtag 114  Q
    |||||||||||||||    
T  38339607 aaggactaaatgtag 38339593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 43734521 - 43734708
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||   |||||||||||||||||||||||| | |    
T  43734521 aatattttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaatcttaacgtttatttgaataaaactaacaga 43734620  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    |||||||||||||| |||| |||  ||||| | || || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  43734621 aaggactaaatgtaataacggtgagaaacttataggaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 43734708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 52557322 - 52557440
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||| | |    
T  52557322 aataccttaacaagacatatgaccaaaatgatactaataaataaagttagaggatccacataatacaaactctaacgtttatttgaataaaactaacaga 52557421  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  52557422 aaggactaaatgtagtaac 52557440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 53751137 - 53751324
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||   |||||||||||||||||||||||| | |    
T  53751137 aataccttaacaaggcataagaccaaaattatactaataaataaagttagaggacccacataacacaaatcataacgtttatttgaataaaactaacaga 53751236  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || ||||||||||||||||||||  ||||| | || || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  53751237 aatgactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 53751324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 14985540 - 14985396
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| | |||||||    
T  14985540 ttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacgaaccctaacgtttatttgaataaaactaacagaaaggac 14985441  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||  |||  ||||| | || || ||||||||||||    
T  14985440 taaatgtagtaatggtgagaaacttagaggaccgaaataaatcaa 14985396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 21763439 - 21763566
Alignment:
Q  24 caaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  21763439 caaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacagaaaggattaaatgtagtaacagtg 21763538  T
Q  123 gaaaactcaaagaactgaaataaatcaa 150  Q
      ||||| | || || ||||||||||||    
T  21763539 agaaacttagaggaccgaaataaatcaa 21763566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16038029 - 16038179
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  16038029 aataccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 16038128  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  16038129 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 16038179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 42855574 - 42855724
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  42855574 aataccttaacgaggaataggaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 42855673  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  42855674 aaagactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 42855724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 41752051 - 41752173
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||| |||||||||||| |||||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  41752051 aataccttagcaaggcatatgatcaaaatgatattaataaataaaattagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 41752150  T
Q  100 aaggactaaatgtagtaacagtg 122  Q
    |||||||| ||||||||||||||    
T  41752151 aaggactacatgtagtaacagtg 41752173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 43566613 - 43566763
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||| ||||||||||| | |    
T  43566613 aataccttaacaagacataggaccaaaatgatactaataaataaagtttgaggacccacataacacaaatcctaacgtttatttaaataaaactaacaga 43566712  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| |||  |||||||||||||||    
T  43566713 aatgactaaatgtagtaacggtgagaaacttaaaagactgaaataaatcaa 43566763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 50508692 - 50508842
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||| | |    
T  50508692 aataccttaacaaggcatatgaccaaaataatactaataaataaagttagaggacccacataacataaaccataacgtttatttgaataaaactaacaga 50508791  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || ||||||||| |||||| ||| |||||| | || ||  |||||||||||    
T  50508792 aaagactaaatgcagtaacggtgaaaaacttagaggaccaaaataaatcaa 50508842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 53995169 - 53995320
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaacta--ata 97  Q
    |||| |||||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||  |||    
T  53995169 aataccttaacaaggaataggaccaaaatgatattaataaataaagttagaggacccacataacacaaaccctaacg-ttatttgaataaaactaacata 53995267  T
Q  98 taaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
     |||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  53995268 aaaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 53995320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23756035 - 23756153
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||||||| || ||||||||| ||||| ||||| ||||||||||||||||||| | |    
T  23756035 aataccttaacaaaacatatgaccaaaatgatactaataaataaagttagaggatccacataacgcaaaccctaacatttatttgaataaaactaacaga 23756134  T
Q  100 aaggactaaatgtagtaac 118  Q
    || |||||||| |||||||    
T  23756135 aatgactaaatatagtaac 23756153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 36122595 - 36122461
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| | |  ||  |||||||||||      
T  36122595 acccacataacacaaactctaacgtttatttgaataaaactaacataaaggattaaatgtagtaacagtgaaaaacttagatgacaaaaataaatcaa-t 36122497  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  36122496 ttttagttagaggaccaatctgataccaattaaata 36122461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 53995096 - 53994999
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||  ||||| |||| || ||||||||||||    
T  53995096 acccacataacacaaactctaacgtttatttgaataaaactaatagaaaagactaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa 53994999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 37206587 - 37206492
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| | || || ||||||||||||    
T  37206587 ccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgaaaaacttagaggaccgaaataaatcaa 37206492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 41878110 - 41878215
Alignment:
Q  17 atatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagt 115  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||| |||| ||||| ||||||||||||||||||  | |||||||| ||||||||    
T  41878110 atatgaccaaaatgatactaataaataaagttggaggacccacataacataaaccctaacatttatttgaataaaactagcagaaaggact-aatgtagt 41878208  T
Q  116 aacagtg 122  Q
    |||||||    
T  41878209 aacagtg 41878215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 12818090 - 12818191
Alignment:
Q  49 agagacccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatc 148  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| ||  ||||| | || || ||||||||||    
T  12818090 agagacccacataacacaaaccctaacgtttatttgaataaaactaacaaaaaggactaaatgtagtaacaatgagaaacttagaggaccgaaataaatc 12818189  T
Q  149 aa 150  Q
    ||    
T  12818190 aa 12818191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 43734448 - 43734314
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | || || |||||||||| |      
T  43734448 acccacataacacaaatcctaacgtttatttgaataaaactaacataaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcta-t 43734350  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  43734349 ttttagttagaggaccaatctgataccaattaaata 43734314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 6505698 - 6505565
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||||      
T  6505698 acccacataacacaaaccctaac-tttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa-t 6505601  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| ||||| |||||||||||||||    
T  6505600 ttttagttagaggaccaatccgatatcaattaaata 6505565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 14985619 - 14985688
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  14985619 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtg 14985688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 16037956 - 16037859
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || ||  |||||||||||    
T  16037956 acccatataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccaaaataaatcaa 16037859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 39448650 - 39448553
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||| |||||| ||||||||||| | |||||||||||||||||||| |||  ||||| |||| || ||||||||||||    
T  39448650 acccacataacacaaactctaacgcttatttaaataaaactaacaaaaaggactaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa 39448553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 52557249 - 52557152
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||   ||||| | || || ||||||||||||    
T  52557249 acccacataacacaaactctaacgtttatttgaataaaactaacagaaaagactaaatgtagtaacagtaagaaacttataggaccgaaataaatcaa 52557152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 53751060 - 53750967
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  53751060 acataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 53750967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 188
Target Start/End: Original strand, 38339782 - 38339914
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnn 154  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||  ||||| | || |  ||||||||||||        
T  38339782 ccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggattaaatgtagtaacagtgtgaaacttagaggatcgaaataaatcaa-ttt 38339880  T
Q  155 nnngttagaggatcaatctgatatcaattaaata 188  Q
       ||||||||||||||| |||| ||||||||||    
T  38339881 ttagttagaggatcaatccgataccaattaaata 38339914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 188
Target Start/End: Complemental strand, 43566538 - 43566406
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnn 154  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||| |||  ||||| | || || ||||||||||||        
T  43566538 ccacataacacaaaccctaacgtttatttgaataaaactaatagaaatgactaattgtagtaacggtgagaaacttagaggaccgaaataaatcaa-ttt 43566440  T
Q  155 nnngttagaggatcaatctgatatcaattaaata 188  Q
       ||||||||| |||||||||| ||||||||||    
T  43566439 ttagttagaggaccaatctgataccaattaaata 43566406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 6712251 - 6712320
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  6712251 acccacataacacaaatcctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtg 6712320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 19088503 - 19088438
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  19088503 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaac 19088438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 24898477 - 24898542
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  24898477 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaac 24898542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 42855501 - 42855404
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  42855501 acccacataacacaaaccctaacctttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 42855404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 46849831 - 46849762
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  46849831 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatatagtaacagtg 46849762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 50508615 - 50508522
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| |||| || ||||||||||||    
T  50508615 acataacacaaaccctaacgtttatttgaataaaactaacaaaaatgactaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa 50508522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 53259300 - 53259231
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  53259300 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacagtg 53259231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 23755578 - 23755515
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  23755578 ccacgtaacacaaactttaacgtttatttgaataaaactaacataaaggactaaatgtagtaac 23755515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 8398193 - 8398127
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaaca 119  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  8398193 acccacataacacaaaccctaacatttatttgaataaaactaatagaaatgactaaatgtagtaaca 8398127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 25269307 - 25269422
Alignment:
Q  72 taacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaat 171  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||||       ||||||||||||||    
T  25269307 taacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggatcaat 25269405  T
Q  172 ctgatatcaattaaata 188  Q
    | |||| ||||||||||    
T  25269406 ccgataccaattaaata 25269422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 41878017 - 41877952
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  41878017 acataacacaaaccctaacatttatttgaataaaactaacagaaaggactaaatgtagtaacagtg 41877952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 44991441 - 44991344
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  44991441 acccacataacacaaaccctaacatttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 44991344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 30683686 - 30683554
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaat-aaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnn 154  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||        
T  30683686 cacataacacaaactctaacgtttatttgaataaaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaatttt 30683587  T
Q  155 nnngttagaggatcaatctgatatcaattaaata 188  Q
        || |||||||||||||||| ||||||||||    
T  30683586 taa-ttggaggatcaatctgataccaattaaata 30683554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 188
Target Start/End: Complemental strand, 20888303 - 20888171
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnn 154  Q
    ||||||||||||||| ||||| || |||||||||||||||| | ||| ||||||||| ||||||||||  ||||| | || || ||||||||||||        
T  20888303 ccacataacacaaaccctaacattcatttgaataaaactaacagaaatgactaaatgcagtaacagtgagaaacttagaggaccgaaataaatcaa-ttt 20888205  T
Q  155 nnngttagaggatcaatctgatatcaattaaata 188  Q
       ||||||||||||||| |||| ||||||||||    
T  20888204 ttagttagaggatcaatccgataccaattaaata 20888171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 41751978 - 41751835
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| |  || ||||||||||||||||||||  ||||| |||| ||  |||||||||||      
T  41751978 acccacataacacaaaccctaacatttatttgaataaaactaacagtaaagactaaatgtagtaacagtgagaaacttaaag-accaaaataaatcaa-t 41751881  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaatacataaaggac 198  Q
         ||||||||| ||||| |||| ||||||||||  ||||||||    
T  41751880 ttttagttagaggaccaatccgataccaattaaatagttaaaggac 41751835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 1433430 - 1433336
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| ||||  ||  ||||| | |||||  |||||||||||    
T  1433430 cacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtaataacgatgagaaacttagagaaccaaaataaatcaa 1433336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 50769112 - 50769243
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnn 155  Q
    ||||||||| |||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || |  ||||||||||||         
T  50769112 cacataacaaaaaccctaacgtttatttgaataaaactaaaagaaatgactaaatgtagtaacggtgagaaacttagaggatcgaaataaatcaa-tttt 50769210  T
Q  156 nngttagaggatcaatctgatatcaattaaata 188  Q
      ||||||||||||||| |||| ||||||||||    
T  50769211 tagttagaggatcaatccgataccaattaaata 50769243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 8592257 - 8592354
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  8592257 acccatataacacaaaccctaacgtttatttgaataaaacaaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 8592354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 15477807 - 15477742
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| | || |||||||||||||||||    
T  15477807 acccacataacacaaacactaacgtttattttaataaaactaacagaatggactaaatgtagtaac 15477742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 21763343 - 21763267
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaat-aaaactaatataaaggactaaatgtagtaacagtggaaaac 128  Q
    ||||||||||||||||||||||||||||||||||| ||||| || | ||| |||||||||||||||| ||| |||||    
T  21763343 acccacataacacaaactctaacgtttatttgaataaaaacaaacagaaatgactaaatgtagtaacggtgaaaaac 21763267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 19508575 - 19508505
Alignment:
Q  53 acccacataacacaaactc-taacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||| | |||||||||||||||||||||||| | ||| ||||||||||||| ||||||    
T  19508575 acccacataacacaaacccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtcacagtg 19508505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 623841 - 623776
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||| |||||| ||||  |||||||||||||||||||||||| | ||||||||||||||||||||    
T  623841 acccatataacataaaccttaacgtttatttgaataaaactaacagaaaggactaaatgtagtaac 623776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 23755659 - 23755704
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag 52  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  23755659 ttaacaaagcatatgaccaaaatgatactaataaataaagttagag 23755704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 25181974 - 25181905
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||| | ||| ||||||||||| ||||||||    
T  25181974 acccatataacacaaaccctaacatttatttgaataaaactaacagaaatgactaaatgtaataacagtg 25181905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 55022429 - 55022312
Alignment:
Q  69 ctctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatc 168  Q
    ||||||||||||||| ||||||||||| | |||||| |||||||||||||||||  ||||| | || |  ||||||||||||       |||||||||||    
T  55022429 ctctaacgtttattttaataaaactaacagaaagga-taaatgtagtaacagtgagaaacttagaggatcgaaataaatcaa-tttttagttagaggatc 55022332  T
Q  169 aatctgatatcaattaaata 188  Q
    ||||||||| ||||||||||    
T  55022331 aatctgataccaattaaata 55022312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6505771 - 6505823
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagaga 53  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  6505771 aataccttaacaaggcataggaccaaaatgatactaataaataaaattagaga 6505823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 33091615 - 33091551
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaa 117  Q
    ||||||||||||||||| |||| |||||||||||||||||||| | ||| ||||||||| |||||    
T  33091615 acccacataacacaaaccctaatgtttatttgaataaaactaacagaaaagactaaatgcagtaa 33091551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 44957668 - 44957709
Alignment:
Q  76 gtttatttgaataaaactaatataaaggactaaatgtagtaa 117  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  44957668 gtttatttgaataaaactaatagaaaggactaaatgtagtaa 44957709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 44125776 - 44125855
Alignment:
Q  71 ctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||| | ||| ||||||||||| ||||||||  ||||| | || ||  |||||||||||    
T  44125776 ctaacgtttatttgaataaaactaacagaaatgactaaatgtaataacagtgagaaacttagaggaccaaaataaatcaa 44125855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 10506183 - 10506333
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  10506183 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 10506282  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  10506283 aaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 10506333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 32633300 - 32633450
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  32633300 aatatcttaacaagaaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacata 32633399  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  32633400 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 32633450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 44893955 - 44893805
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  44893955 aatatcttaacaagacatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacaga 44893856  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  44893855 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 44893805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 42591999 - 42591877
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  42591999 aataccttaacaaggaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 42591900  T
Q  100 aaggactaaatgtagtaacagtg 122  Q
    |||||||||||||||||||||||    
T  42591899 aaggactaaatgtagtaacagtg 42591877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 47669474 - 47669327
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| | |    
T  47669474 aatatcttaacaaggaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccttaacgtttatttgaataaaactaacaga 47669375  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    ||||||||||||||||||| |||  ||||| | || || |||||||||    
T  47669374 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaat 47669327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 18464671 - 18464521
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| || || ||| ||||||||||||| ||||||||||||||||||||||||| |||    
T  18464671 aataccttaacaatgcatatgaccaaaatgatactaataaataaagctataggacctacataacacaaaccctaacgtttatttgaataaaactaacata 18464572  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  18464571 aaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 18464521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 21568960 - 21568774
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagagacccacataacacaaactctaacgtttatttgaataaaactaatataa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||| ||||| ||||||||||||||||||| | ||    
T  21568960 aatatcttaacaaggcatatgaccaaaatgatactaataaataaggttagaggaccacataacacaaaccctaacatttatttgaataaaactaacagaa 21568861  T
Q  101 aggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    | |||||||||||||||| |||  ||||| | || || ||||||||||||        |||||||||||||| |||| ||||||||||    
T  21568860 atgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaatttttaa-ttagaggatcaatccgataccaattaaata 21568774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39951572 - 39951454
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  39951572 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaaaggacccacataacacaaactctaacatttatttgaataaaactaacata 39951473  T
Q  100 aaggactaaatgtagtaac 118  Q
    ||| ||||||| |||||||    
T  39951472 aagaactaaatatagtaac 39951454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 22201831 - 22201644
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||| |||| | |    
T  22201831 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggactcacataacacaaaccttaacgtttatttgaataaacctaacaga 22201732  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||        |||||||||||||| |||| ||||||||||    
T  22201731 aaggactaaatgtagtaacggtgagaaacttagaggacagaaataaatcaatttttat-ttagaggatcaatccgataccaattaaata 22201644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 1994407 - 1994553
Alignment:
Q  5 tcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaagg 103  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||| | |||||    
T  1994407 tcttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaaataacagaaagg 1994506  T
Q  104 actaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||  ||||| | || || ||||||||||||    
T  1994507 actaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 1994553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5900658 - 5900808
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  5900658 aataccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 5900757  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  5900758 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 5900808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 8474081 - 8474199
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  8474081 aataccttaacaaagaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaacactaacgtttatttgaataaaactaacaga 8474180  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  8474181 aaggactaaatgtagtaac 8474199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 16931821 - 16931671
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||||| | |    
T  16931821 aataccttaacaagacatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtatatttgtataaaactaacaga 16931722  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  16931721 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 16931671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 39241573 - 39241423
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| | |    
T  39241573 aataccttaacaagacataagaccaaaatgatactaataaataaagttagaggacccacataacacaaacattaacgtttatttgaataaaactaacaga 39241474  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || ||||||||||||||||||||  ||||| | || || ||||||||||||    
T  39241473 aatgactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 39241423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 39664419 - 39664606
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| | |    
T  39664419 aataccttaacaaggcatagaaccaaaatgatactaataaataaagttagaggacccacataacagaaactctaacatttatttgaataaaactaacaga 39664518  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||| ||       |||||||||||||||||||| ||||||||||    
T  39664519 aaagactaaatgtagtaacggtgagaaacttagaggaccgaaataaattaa-tttttagttagaggatcaatctgataccaattaaata 39664606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 54108137 - 54108287
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  54108137 aataccttaacaagacatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 54108236  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || ||||||||||| ||||| ||  ||||| | || || ||||||||||||    
T  54108237 aatgactaaatgtaataacactgagaaacttagaggaccgaaataaatcaa 54108287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 53716508 - 53716322
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagagacccacataacacaaactctaacgtttatttgaataaaactaatataa 100  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| | ||    
T  53716508 aataccttaacaagacataggaccaaaatgatactaataaataaagttagaggcccacgtaacacaaaccctaacgtttatttgaataaaactaacagaa 53716409  T
Q  101 aggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||| |||| ||||||| |||  ||||| | || || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  53716408 aggaccaaatatagtaacggtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 53716322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 41835167 - 41835311
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||||||||| ||||||||||||| |||||||    
T  41835167 ttaacaaggaatatgaccaaaatgatactaataaataaagttagatgacccatgtaacacaaacactaacgtttatttaaataaaactaatagaaaggac 41835266  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||| |||  ||||| | || || ||||||||||||    
T  41835267 taaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 41835311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 12203786 - 12203973
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagaga-cccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||  ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |    
T  12203786 aataccttaacaaaacatattaccaaaatgatactaataaataaagttagaggtcccacataacacaaactctaacgtttatttgaataaaactatcaga 12203885  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||        |||||||||||||| |||| ||||||||||    
T  12203886 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaatttttaa-ttagaggatcaatccgataccaattaaata 12203973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 11256318 - 11256200
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||  | |    
T  11256318 aataccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacacacataacagaaactctaacgtttatttgaataaaactatcaaa 11256219  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  11256218 aaggactaaatgtagtaac 11256200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21969844 - 21969726
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| | |    
T  21969844 aataccttaacaaggaataagaccaaaacgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaagtaacaaa 21969745  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  21969744 aaggactaaatgtagtaac 21969726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21992280 - 21992162
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| | |    
T  21992280 aataccttaacaaggaataagaccaaaacgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaagtaacaaa 21992181  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  21992180 aaggactaaatgtagtaac 21992162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 22152060 - 22151910
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| | ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| | |    
T  22152060 aataccttaacaatgaataggaccaaaatgatactaataaataaagttagaggacccacataacacaaactctatcgtttatttgaataaaattaacaaa 22151961  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | | ||| ||||||||||||    
T  22151960 aaggactaaatgtagtaacggtgagaaacttagaaaaccgaaataaatcaa 22151910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26318417 - 26318535
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  26318417 aataccttaacaaagaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaacactaacgtttatttgaataaaactaacaga 26318516  T
Q  100 aaggactaaatgtagtaac 118  Q
    || ||||||||||||||||    
T  26318517 aaagactaaatgtagtaac 26318535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 51509354 - 51509476
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||||||||||||||| | |    
T  51509354 aataccttaacaaggaatatgaccaaaatgatactaataaataaagttagaggacccacataatacaaaccctaacatttatttgaataaaactaacaga 51509453  T
Q  100 aaggactaaatgtagtaacagtg 122  Q
    || ||||||||||||||||||||    
T  51509454 aaagactaaatgtagtaacagtg 51509476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 29818377 - 29818270
Alignment:
Q  16 catatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtag 114  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  29818377 catatgaccaaaatgatactaataaataaagttagaggatccatataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtag 29818278  T
Q  115 taacagtg 122  Q
    ||||||||    
T  29818277 taacagtg 29818270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 4757732 - 4757878
Alignment:
Q  5 tcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaagg 103  Q
    ||||| ||||| |||  ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||||    
T  4757732 tcttatcaaggaatagaaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaagg 4757831  T
Q  104 actaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||| |||  ||||| | || || ||||||||||||    
T  4757832 actaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 4757878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 15986430 - 15986300
Alignment:
Q  21 gaccaaaatgatactaataaataaagttagaga-cccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaaca 119  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||||||     
T  15986430 gaccaaaatgatactaataaataaagttagagaacccacataacacaaactctaacatttatttgaataaaactaacagaaaggactaaatgcagtaacg 15986331  T
Q  120 gtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||  ||||| | || || ||||||||||||    
T  15986330 gtgagaaacttagaggaccgaaataaatcaa 15986300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 27801698 - 27801554
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    |||||||||||||  |||||||||||| |||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| | ||||||     
T  27801698 ttaacaaggcatagaaccaaaatgatattaataaataaagttagaggatccacataacagaaactctaacgtttatttgaataaaactaacagaaaggaa 27801599  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| |||||||||||  ||||| | || || ||||||||||||    
T  27801598 taaatctagtaacagtgagaaacttagaggaccgaaataaatcaa 27801554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 28986392 - 28986526
Alignment:
Q  16 catatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtag 114  Q
    ||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||    
T  28986392 catatgaccaaaatgatactaataaataaagttagaggactcatataacacaaaccctaacgtttatttgaataaaactaatagaaatgactaaat-tag 28986490  T
Q  115 taacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||  ||||| | || || ||||||||||||    
T  28986491 taacagtgagaaacttagaggaccgaaataaatcaa 28986526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 46152828 - 46152715
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagagacccacataacacaaactctaacgtttatttgaataaaactaatataa 100  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||  || | ||||||||||| ||||||||||||||||||||||||| | ||    
T  46152828 aataccttaacaaggaatatgaccaaaatgatactaataaataaagttagatgcc-agataacacaaaccctaacgtttatttgaataaaactaacagaa 46152730  T
Q  101 aggactaaatgtagt 115  Q
    |||||||||||||||    
T  46152729 aggactaaatgtagt 46152715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 4773457 - 4773271
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||| ||  ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||  ||||| ||||||||||||||||||| | |    
T  4773457 aatatcttaacgagatataggaccaaaatgatactaataaataaagttagaggacccacataacaaaaaacctaac-tttatttgaataaaactaacaaa 4773359  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||| ||||||| |||  ||||| | || || ||||||||||||        ||||||||||||||||||| ||||||||||    
T  4773358 aaggactaaatatagtaacggtgagaaacttagaggaccgaaataaatcaatttttaa-ttagaggatcaatctgataccaattaaata 4773271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 47303254 - 47303401
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||| | |    
T  47303254 aataccttaataaggcatatgatcaaaatgata-taataaataaagttagaggacccacataaca--aactctaacgtttatttgaataaaactaacaga 47303350  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| |||| ||  |||||||||||    
T  47303351 aatgactaaatgtagtaacggtgagaaacttaaaggaccaaaataaatcaa 47303401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 24428782 - 24428660
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||| |||||||| || ||||||||||||||||||| ||||||||| | ||||||||||||||  | ||||||||||||||||||||||||| |    
T  24428782 aataccttaagaaggcataggagcaaaatgatactaataaattaagttagaggatccacataacacaaatcccaacgtttatttgaataaaactaataga 24428683  T
Q  100 aaggactaaatgtagtaacagtg 122  Q
    || ||||||||||||||||||||    
T  24428682 aatgactaaatgtagtaacagtg 24428660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 54752378 - 54752260
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||| |||||||||||||||||||| | |    
T  54752378 aataccttaacaaagaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccataatgtttatttgaataaaactaacaga 54752279  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||  ||||||||||||    
T  54752278 aaggatcaaatgtagtaac 54752260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 22152133 - 22152267
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||||  ||||||| || |||||||||||||||      
T  22152133 acccatataacacaaaccctaacgtttatttgaataaaactaacagaaacgactaaatgtagtaacagtgagaaactcagaggactgaaataaatcaa-t 22152231  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         |||||||||||||||||||| ||| ||||||    
T  22152232 ttttagttagaggatcaatctgataccaactaaata 22152267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 29818465 - 29818599
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| |||| || ||||||||||||      
T  29818465 acccacataacacaatccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa-t 29818563  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  29818564 ttttagttagaggaccaatctgataccaattaaata 29818599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 27801777 - 27801873
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatca 149  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || |||||||||||    
T  27801777 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatca 27801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 39241646 - 39241741
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatc 148  Q
    |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||    
T  39241646 acccacataacacaaattctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatc 39241741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 21969917 - 21970011
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| | ||| ||||||||||||||||||||  ||||||| || ||||||||||||    
T  21969917 acccacataacacaaaccctaacgtttatttaaataaaactaacagaaatgactaaatgtagtaacagtgagaaactcagaggactgaaataaat 21970011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 21992353 - 21992447
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| | ||| ||||||||||||||||||||  ||||||| || ||||||||||||    
T  21992353 acccacataacacaaaccctaacgtttatttaaataaaactaacagaaatgactaaatgtagtaacagtgagaaactcagaggactgaaataaat 21992447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 24428855 - 24428989
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |||  ||||| | |  || ||||||||||||      
T  24428855 acccacataacacaaaccctaacgtttatttgaataaaactaacataaaagactaaatgtagtaacggtgagaaacttagaagaccgaaataaatcaa-t 24428953  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  24428954 ttttagttagaggaccaatctgataccaattaaata 24428989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 54108064 - 54107967
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  54108064 acccacataacacaaactctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 54107967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 54752451 - 54752516
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  54752451 acccacataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaac 54752516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 4773530 - 4773664
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||| |||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | |  ||  |||||||||||      
T  4773530 acccacatagcacaaaccttgacgtttatttgaataaaactaacataaaggactaaatgtagtaacagtgagaaacttagaagaccaaaataaatcaa-t 4773628  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         |||||||||||||||||||| ||||||||||    
T  4773629 ttttagttagaggatcaatctgataccaattaaata 4773664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 18464744 - 18464841
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  18464744 acccacataacacaaaccctaatgtttatttgaataaaactaatagaaatgactaaatgtagtaacggtgataaacttagaggaccgaaataaatcaa 18464841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 39664346 - 39664250
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatca 149  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || |||||||||||    
T  39664346 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatca 39664250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 44894030 - 44894093
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  44894030 ccacataacacaaactctaatgtttatttgaataaaactaacataaaagactaaatgtagtaac 44894093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 5900585 - 5900488
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  5900585 acccatataacacaaaccctaacgtttatttgaataaaactaatagaaatgactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 5900488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 188
Target Start/End: Original strand, 11256392 - 11256525
Alignment:
Q  54 cccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannn 153  Q
    |||||||| || |||| ||||||||||||||||||||||||| | |||||||||||| ||||||| |||  ||||| |||| || |||||||||| |       
T  11256392 cccacatagcataaaccctaacgtttatttgaataaaactaacaaaaaggactaaatttagtaacggtgagaaacttaaaggaccgaaataaatc-attt 11256490  T
Q  154 nnnngttagaggatcaatctgatatcaattaaata 188  Q
        ||||||||| |||||||||| ||||||||||    
T  11256491 tttagttagaggaccaatctgataccaattaaata 11256525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 12203713 - 12203644
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| | ||| ||||||||||||||||||||    
T  12203713 acccacataacacaaaccctaacgtttatttgaataaaattaacagaaaagactaaatgtagtaacagtg 12203644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 15986526 - 15986619
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  15986526 acataacacaaaccctaacgtttatttgaataaaacttattgaaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 15986619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 47669548 - 47669641
Alignment:
Q  54 cccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    |||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||| |||  ||||| | || || |||||||||    
T  47669548 cccacataacacaaaccctaacgtttatttgaataaaactaacagtaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaat 47669641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 51509281 - 51509220
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtag 114  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  51509281 acccacataacacaaatcctaacgtttatttgaataaaactaacataaaggactaaatgtag 51509220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 53716581 - 53716678
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||   ||  ||||| |||| || ||||||||||||    
T  53716581 acccacataacacaaaccctaacgttaatttgaataaaactaacataaatgactaaatgtagtaatgatgataaacttaaaggaccgaaataaatcaa 53716678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19883454 - 19883358
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaat 96  Q
    |||| ||||||||| | ||  ||||||||||||||||||||||||||||  | || |||||||||||||| ||||||||||||| ||||||||||||    
T  19883454 aataccttaacaagacttagaaccaaaatgatactaataaataaagttaaggtactcacataacacaaaccctaacgtttatttaaataaaactaat 19883358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 19883528 - 19883624
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatca 149  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||| || ||||||||||||| |||  ||||| | || || |||||||||||    
T  19883528 acccacataacacaaaccctaacgtttatttgaataaaattaataaaaacgattaaatgtagtaactgtgagaaacttagaggaccgaaataaatca 19883624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 42592074 - 42592137
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||| |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  42592074 ccacataaaacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaac 42592137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 8474005 - 8473911
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||   |||||||||||||||||||||||| | ||| ||||||||||||||||||||  ||||| | || || ||||||||||||    
T  8474005 cacataacacaaatcataacgtttatttgaataaaactaacagaaatgactaaatgtagtaacagtgagaaacttagagtaccgaaataaatcaa 8473911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 47303181 - 47303087
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || |||||||||    
T  47303181 acccacataacacaaaccctaacatttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaat 47303087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 10506110 - 10506013
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| || |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||  |||  ||||| | || || ||||||||||||    
T  10506110 acccatatgacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaatggtgagaaacttagaggaccgaaataaatcaa 10506013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 21569033 - 21569098
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||| ||||||||||||||||    
T  21569033 acccacataacacaaaccctaacatttatttgaataaaactaacagaaaagactaaatgtagtaac 21569098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 22201904 - 22202038
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||| || |||| ||||||||||||||||||||||||| | ||| || ||||||||||||| |||  ||||| | || || ||||||||||||      
T  22201904 acccacatagcataaaccctaacgtttatttgaataaaactaacagaaatgattaaatgtagtaaccgtgagaaacttagaggaccgaaataaatcaa-t 22202002  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  22202003 ttttagttagaggaccaatctgataccaattaaata 22202038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 28986322 - 28986261
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtag 114  Q
    |||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  28986322 acccacataatacaaactctaacgtttatttgaataaaactaacagaaatgactaaatgtag 28986261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 41835088 - 41834991
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||| |||| |||||| | |||||| ||||||||||||| |||  ||||| | || || ||||||||||||    
T  41835088 acccacataacacaaaccctaacgtttatttaaatacaactaacagaaaggattaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 41834991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 4757656 - 4757592
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaa 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| || ||||||||||||    
T  4757656 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaagaataaatgtagtaa 4757592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 12791473 - 12791529
Alignment:
Q  62 acacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  12791473 acacaaactctaacgtttatttgaataaaactaacagaaaagactaaatgtagtaac 12791529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 16931903 - 16931991
Alignment:
Q  62 acacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  16931903 acacaaactctaacgtttatttgaataagactaacagaaaagactaaatgtagtaacggtgagaaacttagaggacagaaataaatcaa 16931991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 26318341 - 26318247
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||   |||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  26318341 cacataacacaaatcataacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 26318247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 45306991 - 45307114
Alignment:
Q  64 acaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttaga 163  Q
    |||||| ||||| ||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||       ||||||    
T  45306991 acaaaccctaacatttatttgaataaaactaacaaaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-tttttagttaga 45307089  T
Q  164 ggatcaatctgatatcaattaaata 188  Q
    |||||||||||||| ||| ||||||    
T  45307090 ggatcaatctgataccaactaaata 45307114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 1994331 - 1994234
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||| | ||||||||||||||||||||||| | |||||||||||||||| ||| |||  ||||| | || ||  |||||||||||    
T  1994331 acccatataacacaaacccgaacgtttatttgaataaaactaacagaaaggactaaatgtagcaacggtgagaaacttagaggaccaaaataaatcaa 1994234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 1999490 - 1999393
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||| | ||||||||||||||||||||||| | |||||||||||||||| ||| |||  ||||| | || ||  |||||||||||    
T  1999490 acccatataacacaaacccgaacgtttatttgaataaaactaacagaaaggactaaatgtagcaacggtgagaaacttagaggaccaaaataaatcaa 1999393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 32633227 - 32633162
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||| || |||| ||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  32633227 acccacatatcataaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 32633162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 46152904 - 46152964
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagta 116  Q
    ||||||||||||||   ||||||||||||||||||||||| ||||| ||||||||||||||    
T  46152904 cacataacacaaacctcaacgtttatttgaataaaactaacataaatgactaaatgtagta 46152964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 45306976 - 45306897
Alignment:
Q  71 ctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||||||||  ||||| | || || ||||||||||||    
T  45306976 ctaacatttatttgaataaaactaacagaaaggactaaatatagtaacagtgagaaacttagaggaccgaaataaatcaa 45306897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 14370 - 14557
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| | |    
T  14370 aataccttaacaaggcatatgaccaaaatgatgctaataaataaagttagaggacccagataacacaaactctaacgtttatttgaataaaactaacaga 14469  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||||||||||| |||  ||||  | || || ||||||||||||       ||||||||||||||| |||||||||||||||    
T  14470 aaggactaaatgtagtaacggtgagaaacatagaggaccgaaataaatcaa-tttttagttagaggatcaatccgatatcaattaaata 14557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 14297 - 14163
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| |||| || ||||||||||||      
T  14297 acccacataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa-t 14199  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  14198 ttttagttagaggaccaatctgataccaattaaata 14163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 7e-49; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7949627 - 7949477
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  7949627 aataccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacaga 7949528  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  7949527 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 7949477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 45077438 - 45077588
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  45077438 aataccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaataga 45077537  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || ||||||||||||||||||||  ||||| | || ||  |||||||||||    
T  45077538 aatgactaaatgtagtaacagtgagaaacttagaggaccaaaataaatcaa 45077588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5435135 - 5435285
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |    
T  5435135 aataccttaactaggcatatgaccaaaatgatactaataaataaagttagatgacccacataacacaaactctaacgtttatttgaataaaactaacaaa 5435234  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |  |||||||||||||||| |||  ||||| |||| || ||||||||||||    
T  5435235 agtgactaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa 5435285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 38588802 - 38588652
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  38588802 aataccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacaga 38588703  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  38588702 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 38588652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 15871856 - 15872006
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | |    
T  15871856 aataccttaacaagacataggaccaaaatgatactaataaataaagttagaggacccacataacacaagctctaacgtttatttgaataaaactaacaaa 15871955  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || ||||||||||||||||||||  ||||| | || || ||||||||||||    
T  15871956 aaagactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 15872006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 27473306 - 27473456
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| | |    
T  27473306 aataccttaacaaggaataagaccaaaatgatactaataaataaagttagaggacctacataacacaaaccctaacgtttatttgaataaaactaacaga 27473405  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  27473406 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 27473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 45276837 - 45276978
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| | ||| |||    
T  45276837 ttaacaaggaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaatccctaacgtttatttgaataaaactaacagaaaagac 45276936  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    ||||||||||||| |||  ||||| | || || |||||||||    
T  45276937 taaatgtagtaacggtgagaaacttagaggaccgaaataaat 45276978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 1432340 - 1432159
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| | ||| ||     
T  1432340 ttaacaaggcatatgatcaaaatgatattaataaataaagttagaggacccaaataacacaaaccctaacgtttatttgaataaaactaacagaaatgat 1432241  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||||| |||  ||||| | || || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  1432240 taaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 1432159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 1870142 - 1869961
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    |||| |||||||| |||||||||||||||||||||||||||||| | |||||||   ||||||| ||||||||||||||||||||||||| | |||||||    
T  1870142 ttaataaggcataagaccaaaatgatactaataaataaagttaggggacccacaattcacaaaccctaacgtttatttgaataaaactaacagaaaggac 1870043  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||||| |||  ||||| | ||||| ||||||||| ||       |||||||||||||||||||| ||||||||||    
T  1870042 taaatgtagtaacggtgagaaacttagagaaccgaaataaattaa-tttttagttagaggatcaatctgataccaattaaata 1869961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 27669625 - 27669509
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||| ||||||||||| | |||||||    
T  27669625 ttaacaaggtatatgaccaaaatgatactaataaataaagttagaggacccacataacataaaccctaacgtttatttcaataaaactaacagaaaggac 27669526  T
Q  106 taaatgtagtaacagtg 122  Q
    |||||||| ||||||||    
T  27669525 taaatgtactaacagtg 27669509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 33295919 - 33296066
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||| | |    
T  33295919 aataccttaacaaggaatatgatcaaaatgatactaataaataaagttagaggactcacataacacaaaccctaacgtttatttgaataaaactaacaga 33296018  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    || |||||||||||||||| |||  ||||| | || || |||||||||    
T  33296019 aaagactaaatgtagtaacggtgagaaacttagaggaccgaaataaat 33296066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 1646742 - 1646891
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||| ||||||||||||||||||| | |    
T  1646742 aatatcttaacgagatatatgaccaaaatgatactaataaataaagttagaggacccacataacataaaacctaac-tttatttgaataaaactaacaaa 1646840  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  1646841 aaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 1646891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5152769 - 5152919
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| | |    
T  5152769 aataccttaagaaggcatatgaccaaaatgatactagtaaataaagttagaggacccatataacacaaactctaacgtttatttgaataaaactaacaga 5152868  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||  |||||||||| |||| |||  ||||| | || || ||||||||||||    
T  5152869 aaaaactaaatgtaataacggtgagaaacttagaggaccgaaataaatcaa 5152919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 15048598 - 15048496
Alignment:
Q  17 atatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagt 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  15048598 atatgaccaaaatgatactaataaataaagttagaggacccacataacaaaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagt 15048499  T
Q  116 aac 118  Q
    |||    
T  15048498 aac 15048496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 1651807 - 1651956
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||| ||  ||||||||||||||||||||| |||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||| | |    
T  1651807 aatatcttaacgagatatatgaccaaaatgatactaacaaataaagttagaggacccacataacacaaaacctaac-tttatttgaataaaactaacaaa 1651905  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  1651906 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 1651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 1740183 - 1740332
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||| ||  ||||||||||||||||||||| |||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||| | |    
T  1740183 aatatcttaacgagatatatgaccaaaatgatactaacaaataaagttagaggacccacataacacaaaacctaac-tttatttgaataaaactaacaaa 1740281  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  1740282 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 1740332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 40048270 - 40048153
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagagacccacataacacaaactctaacgtttatttgaataaaactaatataa 100  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||||||    |||||||||||||| |||||||||||||||||||||||| | ||    
T  40048270 aataccttaacaatgaatatgaccaaaatgatactaataaataaagttagagg---acataacacaaactttaacgtttatttgaataaaactaacagaa 40048174  T
Q  101 aggactaaatgtagtaacagt 121  Q
    | |||||||||||||||||||    
T  40048173 atgactaaatgtagtaacagt 40048153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 7535074 - 7535186
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||| ||| ||| |||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||||||||||||| ||||||||     
T  7535074 ttaacgaggaataagaccaaaatgatactaataaataaagctagaggactcacataacacaaactataacgtttatttgaataaaactaacataaaggat 7535173  T
Q  106 taaatgtagtaac 118  Q
    |||||||||||||    
T  7535174 taaatgtagtaac 7535186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 37569550 - 37569669
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || || ||||||||||||||||||||||||||||||   |    
T  37569550 aataccttaacaagacatatgaccaaaatgatactaataaataaagttagagaacccacgtagcataaactctaacgtttatttgaataaaactaactga 37569649  T
Q  100 aaggactaaatgtagtaaca 119  Q
    || |||||||| ||||||||    
T  37569650 aaagactaaatatagtaaca 37569669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11173869 - 11174019
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| |||||  ||| ||||||||||||||||||||||||||| ||||||||||   |||||||||| ||||||||||||||||||| |||    
T  11173869 aataccttaacaaagcatagaacccaaatgatactaataaataaagttagaggacccacataatctaaactctaacatttatttgaataaaactaacata 11173968  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  11173969 aaagactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 11174019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 18298488 - 18298581
Alignment:
Q  25 aaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaa 117  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  18298488 aaaatgatactaataaataaagttagaggactcacataacacaaactctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaa 18298581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 44594836 - 44594954
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| ||||  |||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||   |    
T  44594836 aataccttaacaagacatagaaccaaaataatactaataaataaagttagaggatccacataacacaaaccctaacgtttatttgaataaaactaaccga 44594935  T
Q  100 aaggactaaatgtagtaac 118  Q
    || ||||||||||||||||    
T  44594936 aatgactaaatgtagtaac 44594954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 33819947 - 33819850
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  33819947 acccacataacacaaactctaacgtttatttgaataaaactaatagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 33819850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 40660143 - 40660048
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||||||||  ||||| | || |||||||||||||||    
T  40660143 ccacataacacaaaccctaacgtttatttgaataaaactattagaaaagactaaatgtagtaacagtgagaaacttagaggactgaaataaatcaa 40660048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 5435062 - 5434928
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | | ||| ||||||||||||      
T  5435062 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaaaaccgaaataaatcaaat 5434963  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         | ||||||||||||| |||| ||||||||||    
T  5434962 tttagg-tagaggatcaatccgataccaattaaata 5434928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 15871783 - 15871714
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  15871783 acccacataacacaaaccctaacgtttatttgaataaaactaacataaatgactaaatgtagtaacagtg 15871714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 5152696 - 5152630
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaaca 119  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  5152696 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaaca 5152630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 45276759 - 45276694
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  45276759 acccacataacacaaaccctaacatttatttgaataaaactaatataaatgactaaatgtagtaac 45276694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 27669709 - 27669805
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| |||| | |||||||||||||||||| | ||| ||||||||||||||||||||  ||||| ||||| | ||||||||||||    
T  27669709 acccacataacacaaaccctaatgattatttgaataaaactaacagaaatgactaaatgtagtaacagtgtgaaacttaaagatc-gaaataaatcaa 27669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 34470832 - 34470929
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||  |||||||||||||||||||||||| | |||||||||||||||| ||| ||| |||||| | || ||  |||||||||||    
T  34470832 acccacataacacaaaccttaacgtttatttgaataaaactaacagaaaggactaaatgtagcaacggtgaaaaacttagaggaccaaaataaatcaa 34470929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 38588875 - 38588972
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||| |||||| ||||||||||||||||||||| ||| |||||||||||||| ||||||| |||  ||||| | || || ||||||||||||    
T  38588875 acccacataatacaaaccctaacgtttatttgaataaaattaacataaaggactaaatctagtaacggtgagaaacttagaggaccgaaataaatcaa 38588972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 1870224 - 1870288
Alignment:
Q  54 cccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  1870224 cccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 1870288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 11707912 - 11707843
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||| ||||||||||| ||||||||    
T  11707912 acccacataacacaaaccctaacatttatttgaataaaactaagagaaatgactaaatgtattaacagtg 11707843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 37569476 - 37569342
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    |||||||||||| ||||  ||||||||||| |||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||      
T  37569476 acccacataacaaaaaccataacgtttattcgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-t 37569378  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  37569377 ttttagttagaggaccaatctgataccaattaaata 37569342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 40048342 - 40048407
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||||||||  |||||||||||||||||||||||| | ||| ||||||||||||||||    
T  40048342 acccacataacacaaaccttaacgtttatttgaataaaactaacagaaaagactaaatgtagtaac 40048407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 45077364 - 45077307
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaat 110  Q
    |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  45077364 acccacataacacaaaccataacgtttatttgaataaaactaacataaaggactaaat 45077307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 40660179 - 40660271
Alignment:
Q  58 cataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| |||||||||||||||||||||||||||||||| | ||| |||||||| ||||||| |||  ||||| | || || ||||||||||||    
T  40660179 cataatacaaactctaacgtttatttgaataaaactaacagaaaagactaaatatagtaacggtgagaaacttagaggaccgaaataaatcaa 40660271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 15048690 - 15048784
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||   |||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  15048690 cacataacacaaatcataacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 15048784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 1646663 - 1646566
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||| |||||||  | |||||||||||||||||||||| | ||| |||||||| |||||||||||  ||||| | || || ||||||||||||    
T  1646663 acccacatagcacaaaccttgacgtttatttgaataaaactaacagaaatgactaaatatagtaacagtgagaaacttagaggaccgaaataaatcaa 1646566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 1740110 - 1740013
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||| ||||||   | |||||||||||||||||||||| | ||||||||||||||| ||||||||  ||||| | || || ||||||||||||    
T  1740110 acccacatagcacaaatcttgacgtttatttgaataaaactaacagaaaggactaaatgtaataacagtgagaaacttagaggaccgaaataaatcaa 1740013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 7534995 - 7534940
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaa 108  Q
    ||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||    
T  7534995 acccacataacacaaatcctaacgtttatttgaataaaactaacagaaaggactaa 7534940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11707985 - 11708067
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatt 82  Q
    |||| ||||||||  |||| || |||||||||||||||||||||||||||| ||||||||||| | || | ||||||||||||    
T  11707985 aataccttaacaaaacataagatcaaaatgatactaataaataaagttagatgacccacataatataagccctaacgtttatt 11708067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 27473233 - 27473100
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||   ||| |||||||||||||||||||| | ||| || ||||||||||||| |||  ||||| | || || ||||||||||||      
T  27473233 acccacataacacaaatcataatgtttatttgaataaaactaacagaaatgattaaatgtagtaac-gtgagaaacttagaggaccgaaataaatcaa-t 27473136  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||||||| ||||||    
T  27473135 ttttagttagaggaccaatctgatatcaactaaata 27473100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 44594763 - 44594698
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||| |||||||||||| |||||| ||||||||||||| | |||  |||||||||||||||    
T  44594763 acccacatagcacaaactctaatgtttatatgaataaaactaacagaaataactaaatgtagtaac 44594698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34470759 - 34470714
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaag 46  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||    
T  34470759 aataccttaacaaggaatatgatcaaaatgatactaataaataaag 34470714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24659431 - 24659479
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagtta 49  Q
    |||| ||||| |||||| | |||||||||||||||||||||||||||||    
T  24659431 aataccttaataaggcagaggaccaaaatgatactaataaataaagtta 24659479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 7e-49; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 45052924 - 45053111
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  45052924 aataccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacaga 45053023  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    |||||||||||||||||||| ||  ||||| | |  || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  45053024 aaggactaaatgtagtaacactgagaaacttagatgaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 45053111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 2064446 - 2064633
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | |    
T  2064446 aataccttaacaagacataagaccaaaatgatactaataaataaagttagaggacccacataacacaaactctaacatttatttgaataaaactaacaga 2064545  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || || |||||||||||||||||  ||||| | ||||| ||||||||||||       ||||||||||||||| |||| ||||||||||    
T  2064546 aatgattaaatgtagtaacagtgagaaacttagagaaccgaaataaatcaa-tttttagttagaggatcaatccgataccaattaaata 2064633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 37304243 - 37304093
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||| | |    
T  37304243 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggaccctcataacacaaaccctaacgtttatttgaataaaactaacaga 37304144  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| ||||||| |||  ||||| | || |||||||||||||||    
T  37304143 aaggactaaatatagtaacggtgagaaacttagaggactgaaataaatcaa 37304093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 49140378 - 49140528
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  49140378 aataccttaacaaggaatataaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 49140477  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  49140478 aaggactaaatgtagtaacagtgagaaacttataggaccgaaataaatcaa 49140528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 6798042 - 6798160
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||| |||    
T  6798042 aataccttaacaaggcatatgaccaaaatgatactaataaataaaattagaggaccctcataacacaaaccctaacgtttatttgaataaaactaacata 6798141  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  6798142 aaggactaaatgtagtaac 6798160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 12481294 - 12481444
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  12481294 aataccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 12481393  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  12481394 aaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 12481444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 35612317 - 35612467
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||||||| | |    
T  35612317 aataccttaacaagacatatgaccaaaatgatactaataaataaagttagaggaccaacataacacagaccctaacgtttatttgaataaaactaacaga 35612416  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| |||||||||||||||||  ||||| | || |||||||||||||||    
T  35612417 aaggaataaatgtagtaacagtgataaacttagaggactgaaataaatcaa 35612467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 37585928 - 37586057
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||| |||    
T  37585928 aatatcttaacaagacatatgaccaaaataatactaataaataaagttagaggacccacataatataaactctaacgtttatttgaataaaactaacata 37586027  T
Q  100 aaggactaaatgtagtaacagtggaaaact 129  Q
    || |||||||||||||||| ||| ||||||    
T  37586028 aatgactaaatgtagtaacggtgaaaaact 37586057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 1762915 - 1763027
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||| |||    
T  1762915 ttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgac 1763014  T
Q  106 taaatgtagtaac 118  Q
    |||||||||||||    
T  1763015 taaatgtagtaac 1763027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 9006432 - 9006543
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  9006432 ttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataatacaaactctaacgtttatttgaataaaactaacagaaaggac 9006531  T
Q  106 taaatgtagtaa 117  Q
    ||||||||||||    
T  9006532 taaatgtagtaa 9006543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 4330072 - 4330222
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| | |    
T  4330072 aataccttaacaaggaatatgattaaaatgatactaataaataaagttagaagacccacataacacaaaccctaacgtttatttgaataaaactaagaga 4330171  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||   ||||| | || || ||||||||||||    
T  4330172 aaggactaaatgtagtaacagtaagaaacttagaggaccgaaataaatcaa 4330222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 20306217 - 20306067
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||||||||| || | |    
T  20306217 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggactcacataacacaaatcctaacgtttatttgaataaaaccaacaga 20306118  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || ||||||||||| |||| |||| ||||| | ||||| ||||||||||||    
T  20306117 aatgactaaatgtaataacggtgggaaacttagagaaccgaaataaatcaa 20306067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 25995994 - 25995849
Alignment:
Q  6 cttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactct-aacgtttatttgaataaaactaatataaagg 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||||||||| | |||||    
T  25995994 cttaacaaggcataggaccaaaatgatactaataaataaagttagaggatccacataacacaaa-tctcaacgtttatttgaataaaactaacagaaagg 25995896  T
Q  104 actaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||  ||||| |||| || ||||||||||||    
T  25995895 actaaatgtagtaacagtgagaaacttaaaggaccgaaataaatcaa 25995849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12127288 - 12127406
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| | |    
T  12127288 aataccttaacaaggaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaacaaaactaacaga 12127387  T
Q  100 aaggactaaatgtagtaac 118  Q
    || ||||||||||||||||    
T  12127388 aatgactaaatgtagtaac 12127406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 16024104 - 16023962
Alignment:
Q  9 aacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggacta 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| ||||| | ||| |||||    
T  16024104 aacaaggcatatgaccaaaatgatactaataaataaagttagaggaccctcataacacaaaccctaacgtttatttgaataagactaacagaaaagacta 16024005  T
Q  108 aatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| |||  ||||| | || || ||||||||||||    
T  16024004 aatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 16023962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 31703829 - 31703679
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||  ||||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| | |    
T  31703829 aataccttaacaaggaatagaaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccccaacgtttatttgaataaaactaacaga 31703730  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| |||| || ||||||||||||    
T  31703729 aaggactaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa 31703679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 38127924 - 38127774
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||| |      
T  38127924 aataccttaataaggcataagaccaaaatgatactaataaataaagttagaggacccacataaaacaaaccataacgtttatttgaataaaactaacagc 38127825  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| ||||||||||| |||||| | || || ||||||||||||    
T  38127824 aaggactaaatatagtaacagtgaaaaacttagaggaccgaaataaatcaa 38127774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37284963 - 37285079
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||| ||     
T  37284963 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacatttatttaaataaaactaacat- 37285061  T
Q  100 aaggactaaatgtagtaa 117  Q
    ||||||||||||||||||    
T  37285062 aaggactaaatgtagtaa 37285079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 49643906 - 49644022
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  49643906 aataccttaacaaggcataggatcaaaatgatactaataaataaagttagagaacccacataacacaaac-ctaacgtttatttgaataaaactaacaga 49644004  T
Q  100 aaggactaaatgtagtaa 117  Q
    ||||||||||||||||||    
T  49644005 aaggactaaatgtagtaa 49644022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 27400665 - 27400777
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||| |||    
T  27400665 ttaacaaggcataagactaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaaagac 27400764  T
Q  106 taaatgtagtaac 118  Q
    |||||||||||||    
T  27400765 taaatgtagtaac 27400777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 37576396 - 37576278
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  37576396 aataccttaacaaggaataggaccaaaatgatacttataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 37576297  T
Q  100 aaggactaaatgtagtaac 118  Q
    ||||||||||| |||||||    
T  37576296 aaggactaaatttagtaac 37576278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 3089551 - 3089407
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    |||||||| |||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||||||||||||| ||||||| | |||||||    
T  3089551 ttaacaagacatatgaccaaaatgatactaataaataaagttataggatccacataacacaaaccctaacgtttatttgaattaaactaacagaaaggac 3089452  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||| |||| |||  ||||| | || || ||||||||||||    
T  3089451 taaatgtaataacggtgagaaacttagaggaccgaaataaatcaa 3089407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 188
Target Start/End: Original strand, 27547910 - 27548091
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||||||||| | ||||||     
T  27547910 ttaacaaagcatagtaccaaaatgatactaataaataaagttagaggacccacataccataaaccctaacgtttatttgaataaaactaacagaaaggat 27548009  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    ||||||||||||| |||  ||||| | || || ||||||||||||       ||||||||| |||||||||| ||||||||||    
T  27548010 taaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatctgataccaattaaata 27548091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 23476576 - 23476726
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||||||||||||||||| | |    
T  23476576 aataccttaacaagacataggaccaaaatgatactaataaataaagttagaggactcacataacacaaacattaacgtttatttgaataaaactaacaga 23476675  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || ||||||||| ||||||| ||  ||||| | || || ||||||||||||    
T  23476676 aaagactaaatgaagtaacaatgagaaacttagaggaccgaaataaatcaa 23476726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8762634 - 8762750
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactc-taacgtttatttgaataaaactaatat 98  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||| |     
T  8762634 aataccttaacaagacatatgaccaaaatgatactaataaataaagttagaggacccacataacac-aactcttaacgtttatttgaataaagctaacag 8762732  T
Q  99 aaaggactaaatgtagta 116  Q
    ||||||||||||||||||    
T  8762733 aaaggactaaatgtagta 8762750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 39486442 - 39486577
Alignment:
Q  15 gcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgta 113  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||   |||||||||||||||    
T  39486442 gcataggaccaaaatgatactaataaataaagttagaggacccatataacacaaaccctaacgttt-tttgaataaaactaactgaaaggactaaatgta 39486540  T
Q  114 gtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||  |||||| | | ||| ||||||||||||    
T  39486541 gtaacggtaaaaaacttagaaaacggaaataaatcaa 39486577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 45843367 - 45843470
Alignment:
Q  16 catatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtag 114  Q
    |||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||    
T  45843367 cataggaccaaaatgatactaataaaaaaagctagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtag 45843466  T
Q  115 taac 118  Q
    ||||    
T  45843467 taac 45843470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 20306290 - 20306421
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||| ||  |||||||||||      
T  20306290 acccacataacacaaaccctaacgtttatttgaataaaactaatagaaaggactaaatgtagtaacagtgagaaacttaaaggaccaaaataaatcaa-t 20306388  T
Q  153 nnnnngttagaggatcaatctgatatcaattaa 185  Q
         ||| |||||||||||||||| |||||||    
T  20306389 ctttagttggaggatcaatctgataccaattaa 20306421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 37304316 - 37304413
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  37304316 acccacataacacaaaccctaacgtttatttgaataaaactaacataaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 37304413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 38000645 - 38000554
Alignment:
Q  59 ataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||| | || || ||||||||||||    
T  38000645 ataacacaaactctaacgtttatttgaataaaactaatagaaaggactaaatgtagtaacaatgagaaacttagaggaccgaaataaatcaa 38000554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 4697044 - 4696947
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||  ||||| | || ||  |||||||||||    
T  4697044 acccacataacacaaactctaacgtttatttgaattaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccaaaataaatcaa 4696947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 37576469 - 37576566
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| |||| |||||||||||||||||||| | ||| ||||||||||||||||||||  ||||| | ||||| ||||||||||||    
T  37576469 acccacataacacaaaccctaatgtttatttgaataaaactaacagaaaagactaaatgtagtaacagtgagaaacttagagaaccgaaataaatcaa 37576566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 49140305 - 49140208
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  49140305 acccacataacacaaactctaacgtttatttgaataaaactaagagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 49140208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 49643833 - 49643736
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  49643833 acccacataacacaaaccctaatgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 49643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 56 - 198
Target Start/End: Complemental strand, 35612241 - 35612100
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnn 155  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || |   |||||||||||         
T  35612241 cacataacacaaaccctaacgtttatttgaataaaactaaaagaaaggactaaatgtagtaacagtgagaaacttagaggaacaaaataaatcaa-tttt 35612143  T
Q  156 nngttagaggatcaatctgatatcaattaaatacataaaggac 198  Q
      ||||||||||||||| |||| ||||||||||| || |||||    
T  35612142 tagttagaggatcaatccgataccaattaaatacttagaggac 35612100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 6797969 - 6797835
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||| ||||||||| |||||| |||  ||||| | || || ||||||||||||      
T  6797969 acccacataacacaaactctaacgtttatttgaacaaaactaacagaaatgactaaatggagtaacggtgagaaacttagaggaccgaaataaatcaatt 6797870  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
          ||||| ||||||||||||||||||||||||    
T  6797869 tttaa-ttagaagatcaatctgatatcaattaaata 6797835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 16024185 - 16024319
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    |||||||||||| |||| ||||||||||||||||||||||||  | |||||||||||||||||||| |||  ||||| | || || ||||||||||||      
T  16024185 acccacataacataaaccctaacgtttatttgaataaaactaccagaaaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa-t 16024283  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||||||||| |||| ||||||||||    
T  16024284 ttttagttagaggatcaatccgataccaattaaata 16024319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 8760434 - 8760337
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| |||| ||||||||||||||| |||| ||||| ||||||||||||||||| || |||||| | || |  ||||||||||||    
T  8760434 acccacataacacaaaccctaatgtttatttgaataaagctaacataaatgactaaatgtagtaacactgaaaaacttagaggatcgaaataaatcaa 8760337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 9006353 - 9006288
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  9006353 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtactaac 9006288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 12481221 - 12481124
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  12481221 acccatataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 12481124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 23476503 - 23476438
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  23476503 acccacataacacagattctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaac 23476438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 26707358 - 26707293
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||    
T  26707358 acccacataacacaaactccaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 26707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 44322948 - 44323045
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  44322948 acccacataacacaaaccctaacatttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 44323045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26707431 - 26707491
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacat 60  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26707431 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacat 26707491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 188
Target Start/End: Complemental strand, 45052849 - 45052718
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnn 154  Q
    |||||||||| || || |||||||||||||||||||||||| | ||| || |||||||||||||||||  ||||| | || || ||||||||||||        
T  45052849 ccacataacaaaacct-taacgtttatttgaataaaactaacagaaatgattaaatgtagtaacagtgagaaacttataggaccgaaataaatcaa-ttt 45052752  T
Q  155 nnngttagaggatcaatctgatatcaattaaata 188  Q
       |||||||||||||||||||| ||||||||||    
T  45052751 ttagttagaggatcaatctgataccaattaaata 45052718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 1762836 - 1762739
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||| |||||| |||| |||||||||||||||||||| ||||| || ||||||| |||||||||  ||||| | || || ||||||||||||    
T  1762836 acccacataatacaaaccctaatgtttatttgaataaaactaacataaatgattaaatgttgtaacagtgagaaacttagaggaccgaaataaatcaa 1762739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 27547831 - 27547734
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||| |||||||| |||||||||||||||||||||| || | ||||||||||||||| |||| |||  ||||| | || || ||||||||||||    
T  27547831 acccacatgacacaaaccctaacgtttatttgaataaaaccaacagaaaggactaaatgtattaacggtgagaaacttagaggaccgaaataaatcaa 27547734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44322875 - 44322824
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag 52  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  44322875 aataccttaacaaggcataggaccaaaatgatactaataaataaagttagag 44322824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 12127216 - 12127122
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||   |||||||||||||||||||||||| | |||||||||||||||| ||| |||  ||||| | || || ||||||||||||    
T  12127216 cacataacacaaatcataacgtttatttgaataaaactaacagaaaggactaaatgtagaaacggtgagaaacttagaggaccgaaataaatcaa 12127122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 25996072 - 25996130
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatg 111  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||    
T  25996072 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggattaaatg 25996130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 26723092 - 26723223
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnn 155  Q
    |||||||||| ||| ||||||||||||||||||||||||| | |||||| |||||||| |||| |||  ||||| | || ||  |||||||||||         
T  26723092 cacataacacgaaccctaacgtttatttgaataaaactaacagaaaggattaaatgtaataacggtgagaaacttagaggaccaaaataaatcaa-tttt 26723190  T
Q  156 nngttagaggatcaatctgatatcaattaaata 188  Q
      |||||| ||||||||||||| ||||||||||    
T  26723191 tagttagatgatcaatctgataccaattaaata 26723223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 31703901 - 31703970
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||| |||||| |||  ||||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  31703901 acccatataacataaagcctaacgtttatttgaataaaattaacagaaaggactaaatgtagtaacagtg 31703970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 37585851 - 37585798
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||    
T  37585851 acataacacaaactctaacgtttatttgaataaaactaacagaaatgactaaat 37585798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 39486364 - 39486267
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||||||||||||||| |||||| | ||| ||| ||||| |||||  |||  ||||| |||  || ||||||||||||    
T  39486364 acccacataacacaaactctaacgtttatttgaatagaactaacagaaaagaccaaatgcagtaaatgtgagaaacttaaacgaccgaaataaatcaa 39486267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 37284886 - 37284793
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||  ||||  |||||||||||||||||| | ||| |||||||||||||||| |||  ||||| |||  || ||||||||||||    
T  37284886 acataacacaaaccataactcttatttgaataaaactaacaaaaaagactaaatgtagtaacggtgagaaacttaaatgaccgaaataaatcaa 37284793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4697117 - 4697168
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag 52  Q
    |||| ||||||||| |||| || |||||||||||||||||||||||||||||    
T  4697117 aataccttaacaagacataggatcaaaatgatactaataaataaagttagag 4697168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 10831247 - 10831196
Alignment:
Q  99 aaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||| ||| |||||| || |||| ||||||||||||    
T  10831247 aaaggactaaatgtagtaacggtgaaaaacttaaggaaccgaaataaatcaa 10831196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 188
Target Start/End: Complemental strand, 46592870 - 46592840
Alignment:
Q  158 gttagaggatcaatctgatatcaattaaata 188  Q
    |||||||||||||||||||||||||||||||    
T  46592870 gttagaggatcaatctgatatcaattaaata 46592840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 20962 - 20816
Alignment:
Q  5 tcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaagg 103  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  20962 tcttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacagaaagg 20863  T
Q  104 actaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||  ||||| | || || ||||||||||||    
T  20862 actaaatgtagtaacagtgtgaaacttagaggaccgaaataaatcaa 20816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 21038 - 21088
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaagg 103  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||| |||||    
T  21038 acccatataacacaaacccgaacgtttatttgaataaaactaatagaaagg 21088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 50711 - 50896
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  50711 aataccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 50810  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaa 186  Q
    || |||||||||||||||| |||  ||||| | |  || ||||||||||||       |||||||||||||||||||| ||||||||    
T  50811 aatgactaaatgtagtaacggtgagaaacttagaagaccgaaataaatcaa-tttttagttagaggatcaatctgataccaattaaa 50896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 50638 - 50541
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||| |||  ||||| |||| || ||||||||||||    
T  50638 acccacataacacaaaccctaacgtttatttgaataaaaataacagaaaggactaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa 50541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 18053171 - 18052975
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||    
T  18053171 aataccttaacaaagcatagaaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacata 18053072  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaatacataaagga 197  Q
    || ||||||||||||||||||||  ||||| | || || ||||||||||||       ||||||||| ||||| |||| ||||||||||  |||||||    
T  18053071 aatgactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatccgataccaattaaatagttaaagga 18052975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 34890853 - 34890737
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | ||| |||    
T  34890853 ttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaaagac 34890754  T
Q  106 taaatgtagtaacagtg 122  Q
    |||||||| ||||||||    
T  34890753 taaatgtaataacagtg 34890737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 9046301 - 9046114
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| | |    
T  9046301 aatagcttaacaaggcataagaccaaaatgatactaataaataaatttagaggacccacataacacaaactctaacatttatttgaataaaactaacaga 9046202  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||        |||||||| |||||||||| ||||||||||    
T  9046201 aaagactaaatgtagtaacggtgacaaacttagaggaccgaaataaatcaatttttac-ttagaggaccaatctgataccaattaaata 9046114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3423405 - 3423523
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| | |    
T  3423405 aataccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacatatcacaaactctaacgtttatttgaataaaactaacaga 3423504  T
Q  100 aaggactaaatgtagtaac 118  Q
    || ||||||||||||||||    
T  3423505 aaagactaaatgtagtaac 3423523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 5311041 - 5310919
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| | |    
T  5311041 aataccttaacaatgaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacatttatttgaataaaactaacaga 5310942  T
Q  100 aaggactaaatgtagtaacagtg 122  Q
    |||||||||||||||||||||||    
T  5310941 aaggactaaatgtagtaacagtg 5310919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7270844 - 7270726
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| | |    
T  7270844 aataccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaaa 7270745  T
Q  100 aaggactaaatgtagtaac 118  Q
    || |||||||| |||||||    
T  7270744 aaagactaaatatagtaac 7270726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 32993255 - 32993400
Alignment:
Q  6 cttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaagga 104  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| | ||||||    
T  32993255 cttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataatacaaaccctaacgtttatttgaataaaactaacagaaagga 32993354  T
Q  105 ctaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||| ||| |||  ||||| | || || ||||||||||||    
T  32993355 ctaaatgtagaaacggtgagaaacttataggaccgaaataaatcaa 32993400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 26600572 - 26600425
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  26600572 aataccttaataaggaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 26600473  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaat 147  Q
    || |||||||||||||||| |||  ||||| | || || |||||||||    
T  26600472 aatgactaaatgtagtaacggtgataaacttagaggaccgaaataaat 26600425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5639408 - 5639526
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagaga-cccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||||||||||||| | |    
T  5639408 aataccttaacaaggaatatgaccaaaatgatactaataaataaagttagagaacccacataacacaaaccataatgtttatttgaataaaactaacaaa 5639507  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  5639508 aaggactaaatgtagtaac 5639526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5938048 - 5938198
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| | |    
T  5938048 aataccttaacaaggcatagaaccaaaatgatactaataaataaagttagaggacccacataacacaaaccttaacgtttatttgaataaaactaacaga 5938147  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||  |||  ||||| | || || ||||||||||||    
T  5938148 aaggactaaatgtagtaattgtgagaaacttagaggaccgaaataaatcaa 5938198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 6137613 - 6137762
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| | |    
T  6137613 aatatcttaacgagatatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaatctaac-tttatttgaataaaactaacaaa 6137711  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  6137712 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 6137762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 25176892 - 25177010
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagagaccc-acataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| | |    
T  25176892 aatatcttaacaaggaataggaccaaaatgatgctaataaataaagttagaggccccacataacacaaaccctaacgtttatttgaataaaactaacaga 25176991  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  25176992 aaggactaaatgtagtaac 25177010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 34994615 - 34994737
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||||||||||| |||    
T  34994615 aataccttaacaaggcataagaccaaaatgatactaataaatcaagttagaggacccgcataacacaaaccctaacgtttatttgaataaaactaacata 34994714  T
Q  100 aaggactaaatgtagtaacagtg 122  Q
    || ||||||||| ||||||||||    
T  34994715 aaagactaaatgcagtaacagtg 34994737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 150
Target Start/End: Complemental strand, 7270162 - 7270016
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaat--aaaactaatataaagg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| |||  |||||||| | ||| |    
T  7270162 ttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacatttatttaaataaaaaactaacagaaatg 7270063  T
Q  104 actaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||| |||  ||||| | ||||| ||||||||||||    
T  7270062 actaaatgtagtaacggtgagaaacttagagaaccgaaataaatcaa 7270016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21540212 - 21540330
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||| | |    
T  21540212 aatatcttaacaaggcataggatcaaaatgatactaataaataaagttagaggacccacataacgcaaaccctaacgtttatttgaataaaactaacaga 21540311  T
Q  100 aaggactaaatgtagtaac 118  Q
    || || |||||||||||||    
T  21540312 aatgattaaatgtagtaac 21540330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26957177 - 26957059
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||| ||||| |||| ||||||| ||||| |||||||||||||||||||||||| |||    
T  26957177 aataccttaacaagacataggaccaaaatgatactaataaataaagctagaggacccccataacataaactttaacgtttatttgaataaaactaacata 26957078  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  26957077 aaggactaaatgtagtaac 26957059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 2517217 - 2517067
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| | |||||||||||||||| || |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  2517217 aataccttaacaaagaatatgaccaaaatgattcttataaataaagttggaggacccacataacacaaacactaacgtttatttgaataaaactaacaga 2517118  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||||||   ||||| | || || ||||||||||||    
T  2517117 aaagactaaatgtagtaacagtcagaaacttagaggaccgaaataaatcaa 2517067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24744543 - 24744425
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||  ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  24744543 aataccttaacaagaaataggaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 24744444  T
Q  100 aaggactaaatgtagtaac 118  Q
    || ||||||||| ||||||    
T  24744443 aatgactaaatgcagtaac 24744425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31247331 - 31247213
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||| | |    
T  31247331 aataccttaacaaggaatatgatcaaaatgatactaataaataaagttagaggactcacataaaacaaactctaacgtttatttgaataaaactaacaga 31247232  T
Q  100 aaggactaaatgtagtaac 118  Q
    || || |||||||||||||    
T  31247231 aaagattaaatgtagtaac 31247213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 6236156 - 6236274
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||||| |  |||||||||||||| ||||||||||||||||||||||||| | |    
T  6236156 aatatcttaacaaggcataggaccaagatgatactaataaatgaagttagaggattcacataacacaaaccctaacgtttatttgaataaaactaacaga 6236255  T
Q  100 aaggactaaatgtagtaac 118  Q
    ||||| ||||| |||||||    
T  6236256 aaggattaaatttagtaac 6236274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 21856790 - 21856940
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||||||||||| ||||||||||||||||||| ||||| |||||| ||||  |||||||||||||||||||||||| | |    
T  21856790 aataccttaacaaggaataagaccaaaatgatgctaataaataaagttagaggacccatataacaaaaaccataacgtttatttgaataaaactaacaga 21856889  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  21856890 aaggactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 21856940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31237961 - 31237843
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| | |||| |||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| | |    
T  31237961 aataccttaacaaggaacatgatcaaaataatactaataaataaagttagaggacccacataaaacaaactctaacatttatttgaataaaactaacaga 31237862  T
Q  100 aaggactaaatgtagtaac 118  Q
    || ||||||||||||||||    
T  31237861 aatgactaaatgtagtaac 31237843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 32753461 - 32753595
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    |||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||||      
T  32753461 acccacataacacaaactctgacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa-t 32753559  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||||||||| |||| ||||||||||    
T  32753560 ttttagttagaggatcaatccgataccaattaaata 32753595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 6532377 - 6532257
Alignment:
Q  31 atactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaact 129  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||  ||||||||||||||| |||  ||| |    
T  6532377 atactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaatcactaaatgtagtaacggtgagaaatt 6532278  T
Q  130 caaagaactgaaataaatcaa 150  Q
     | ||||| ||||||||||||    
T  6532277 tagagaaccgaaataaatcaa 6532257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35167727 - 35167837
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||| | |    
T  35167727 aataccttaacaaggattaggactaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttacttgaataaaactaacaga 35167826  T
Q  100 aaggactaaat 110  Q
    ||||| |||||    
T  35167827 aaggattaaat 35167837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 3423332 - 3423235
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||  ||||| | || || ||||||||||||    
T  3423332 acccacataacacaaaccctaacgtttatttgaataaaactaatagaaaagactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 3423235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 5311114 - 5311179
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5311114 acccacataacacaaactctaacgtttatttgaataaaactaacataaaggactaaatgtagtaac 5311179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 5937975 - 5937841
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||||  ||||| | || || ||||||||||||      
T  5937975 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa-t 5937877  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||| |||||||||||| ||||||||||    
T  5937876 ttttagttagagaatcaatctgataccaattaaata 5937841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 18053241 - 18053375
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||| | || || ||||||||||||      
T  18053241 acccatataaaacaaactctaacgtttatttgaataaaactaatagaaaggactaaatgtagtaacggtgagaaacttagagtaccgaaataaatcaa-t 18053339  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  18053340 ttttagttagaggaccaatctgataccaattaaata 18053375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 24744609 - 24744706
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||  ||||| ||||||  ||||||||||||    
T  24744609 acccacataacacaaaccctaacgtttatttgaataaaactaatagaaaagactaaatgtaataacagtgagaaacttaaagaatggaaataaatcaa 24744706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 31238034 - 31238132
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaa-agaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| ||| |||||| || || || ||||||||||||    
T  31238034 acccacataacacaaactctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgaaaaacttaagaggaccgaaataaatcaa 31238132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 26600635 - 26600732
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||||  ||||| | || || ||||||||||||    
T  26600635 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 26600732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 32753388 - 32753205
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| ||||    | ||||||||||||| |||||||| |||||||||||||||||  |||| ||||||||||||||||||| | |    
T  32753388 aataccttaacaaggcataggacc----ttatactaataaatacagttagaggacccacataacacaaaccttaacatttatttgaataaaactaacaga 32753293  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    || ||||||||||| |||| |||  ||||| | || || ||||||||||||       ||||||||||||||||||||  |||||||||    
T  32753292 aatgactaaatgtaataacggtgagaaacttagaggaccgaaataaatcaa-tttttagttagaggatcaatctgatactaattaaata 32753205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 34890932 - 34891066
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||  ||||||||||||||||||||||||| | ||| ||||||||||||||||||||  ||||| | || || ||||||||||||      
T  34890932 acccacataacacaaatcctaacgtttatttgaataaaactaacagaaaagactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa-t 34891030  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  34891031 ttttagttagaggaccaatctgataccaattaaata 34891066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 26957258 - 26957346
Alignment:
Q  62 acacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||| |||||| |||| || ||||||||||||    
T  26957258 acacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgaaaaacttaaaggaccgaaataaatcaa 26957346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 978577 - 978480
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  978577 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 978480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 6236083 - 6235986
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||| |||  ||||| | || || ||||||||||||    
T  6236083 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgcagtaacggtgagaaacttagaggaccgaaataaatcaa 6235986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 21856717 - 21856620
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  21856717 acccatataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 21856620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 34994542 - 34994445
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||| |||  ||||| | || || ||||||||||||    
T  34994542 acccacataacacaaattctaacgtttatttgaataaaactaacagaaaggactaaatatagtaacggtgagaaacttagaggaccgaaataaatcaa 34994445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 35167652 - 35167555
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  35167652 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 35167555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 15932844 - 15932941
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  15932844 acccatataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 15932941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 9046374 - 9046437
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagta 116  Q
    ||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||    
T  9046374 acccacataacacaaaccctaacgtttatttgaatagaactaacagaaaggactaaatgtagta 9046437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 25176819 - 25176760
Alignment:
Q  59 ataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  25176819 ataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaac 25176760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 31247404 - 31247498
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaa-agaactgaaataaat 147  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||| |||| ||||||||||| ||| |||||| || || ||||||||||||    
T  31247404 acccacataacacaaactttaacgtttatttgaataaaactaacagaaatgact-aatgtagtaacggtgaaaaacttaagaggactgaaataaat 31247498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 6137538 - 6137444
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatca 149  Q
    |||||||||||||||  | |||||||||||||||||||||| | ||| ||||||||||||||||||||  ||||| | || || |||||||||||    
T  6137538 ccacataacacaaaccttgacgtttatttgaataaaactaacagaaaagactaaatgtagtaacagtgagaaacttagaggaccgaaataaatca 6137444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 7270920 - 7271014
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||| | ||||||||||| ||||||||||||| |||||||||||| |||||||  ||  ||||| | || |||||||||||||||    
T  7270920 cacataacacaaaccccaacgtttatttaaataaaactaatagaaaggactaaatatagtaacgatgagaaacttagaggactgaaataaatcaa 7271014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 7270241 - 7270306
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| | ||| ||||||||||||||||    
T  7270241 acccacataccacaaactctaacgtttatttgaataaaattaacagaaaagactaaatgtagtaac 7270306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 10412796 - 10412886
Alignment:
Q  60 taacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| |||||||| ||||||| |||  ||||| | || || ||||||||||||    
T  10412796 taacacaaaccctaacgtttatttgaataaaattaatagaaatgactaaatatagtaacggtgagaaacttagaggaccgaaataaatcaa 10412886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 32993173 - 32993111
Alignment:
Q  57 acataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaaca 119  Q
    ||||||||||||  ||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  32993173 acataacacaaatcctaacgtttatttgaataaaactaacagaaaggaccaaatgtagtaaca 32993111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 5639335 - 5639294
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaacta 94  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  5639335 acccacataacacaaactctaacatttatttgaataaaacta 5639294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 2517293 - 2517387
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| |   |||||||||||| ||||||||||| | |||||| ||||||||||||| |||  ||||| | || || ||||||||||||    
T  2517293 cacataacacagatcataacgtttatttaaataaaactaacagaaaggattaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 2517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 14276534 - 14276496
Alignment:
Q  80 atttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  14276534 atttgaataaaactaatacaaaggactaaatgtagtaac 14276496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 3036027 - 3035945
Alignment:
Q  69 ctctaacgtttatttgaataaaactaata-taaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||| ||| |  ||| ||||||||||||||| ||||  ||||| | || || ||||||||||||    
T  3036027 ctctaacgtttatttgaataaaattaacagaaaatgactaaatgtagtaagagtgagaaacttagaggaccgaaataaatcaa 3035945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 45971 - 45821
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  45971 aataccttaacaaggaatatgaccaaaatgaaactaataagtaaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 45872  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  45871 aaggactaaatgtagtaaccgtgagaaacttagaggaccgaaataaatcaa 45821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 56424 - 56521
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||| |||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  56424 acccacataaaacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 56521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 63549 - 63646
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||| |||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  63549 acccacataaaacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 63646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 82093 - 82211
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||  ||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |    
T  82093 aatatcttaacaagaaataggaccaaaatgatattaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaactaacaga 82192  T
Q  100 aaggactaaatgtagtaac 118  Q
    |||||||||||||||||||    
T  82193 aaggactaaatgtagtaac 82211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 82020 - 81923
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| || |||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  82020 acccaaattacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 81923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 24040320 - 24040472
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaat--gatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaata 97  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |    
T  24040320 aataccttaacaaggcatatgaccaaaatatgatactaataaataaagttagaagacccacataacacaaaccctaacgtttatttgaataaaactaaca 24040419  T
Q  98 taaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
     ||| |||||||||||| ||| |||  ||||| |||| |||||||||| ||||    
T  24040420 gaaatgactaaatgtaggaacggtgagaaacttaaaggactgaaataagtcaa 24040472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 2183152 - 2183040
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  2183152 ttaacaagatatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaagctaacataaaggac 2183053  T
Q  106 taaatgtagtaac 118  Q
    |||||||||||||    
T  2183052 taaatgtagtaac 2183040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 188
Target Start/End: Original strand, 32288318 - 32288498
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| | ||| |||    
T  32288318 ttaacaaggcatatgaccaaaataatactaataaataaagttagaggacccacataacacaaactctaac-attatttgaataaaactaacagaaatgac 32288416  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaannnnnnngttagaggatcaatctgatatcaattaaata 188  Q
    |||||||| ||||||||  ||||| | || || ||||||||||||       ||||||||| |||||| ||||||||||||||    
T  32288417 taaatgtattaacagtgataaacttagaggaccgaaataaatcaa-tttttagttagaggaccaatctaatatcaattaaata 32288498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 9989538 - 9989388
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||| ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  9989538 aataccttaataagacataggaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 9989439  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    || |||||||||||||||| |||  ||||| | || || ||||||||||||    
T  9989438 aatgactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 9989388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 25567229 - 25567373
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggac 105  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| | ||| |||    
T  25567229 ttaacaaggcatatgactaaaataatactaataaataaagttagaggactcacataacaaaaactctaacgtttatttgaataaaactaacagaaaagac 25567328  T
Q  106 taaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||| ||| |||||| |||| |   |||||||||||    
T  25567329 taaatgtagtaacggtgaaaaacttaaaggatcaaaataaatcaa 25567373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 34264583 - 34264702
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || | |    
T  34264583 aatatcttaacaaggcatagaaccaaaatgatattaataaataaagttagaggacccacataacacaaactctaacgtttatttgaataaaaccaacaga 34264682  T
Q  100 aaggactaaatgtagtaaca 119  Q
    || ||||||||||| |||||    
T  34264683 aatgactaaatgtaataaca 34264702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 37424497 - 37424650
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag----acccacataacacaaactctaacgtttatttgaataaaactaat 96  Q
    |||||||||||||   ||| ||||||||||||| ||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||     
T  37424497 aatatcttaacaaaaaataggaccaaaatgatattaataaataaagttagaggaggacccacataacacaaactctaacgtttatttgaataaaactaac 37424596  T
Q  97 ataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    | |||||||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  37424597 agaaaggactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 37424650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 36440435 - 36440585
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||| | |    
T  36440435 aataccttaacaatgaatatgaccaaaatgatactaataaataaagttagaggacccatataacacaaaccccaacgtttatttgaataaaactaacaga 36440534  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| |||| | ||||  ||||| | || || ||||||||||||    
T  36440535 aaggactaaatatagttatagtgagaaacttagaggaccgaaataaatcaa 36440585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 35570015 - 35570165
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| ||| |||| ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||| | |    
T  35570015 aataacttaacaaggaataagaccgaaatgatactaataaataaagttagaggactcacataacacaaaccctaacgtttatttgaataaaactaacaga 35570114  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |  |||||||||||||||| |||  ||||| | |  ||| |||||||||||    
T  35570115 agtgactaaatgtagtaacggtgagaaacttagaagactaaaataaatcaa 35570165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 11316158 - 11316056
Alignment:
Q  16 catatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtag 114  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||| | ||| ||||||||||||    
T  11316158 cataggaccaaaatgatactaataaataaagttagaggacctacataacacaaaccctaacgtttattggaataaaactaacagaaatgactaaatgtag 11316059  T
Q  115 taa 117  Q
    |||    
T  11316058 taa 11316056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 38958959 - 38959108
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||| ||  ||| ||||||||||||||| |||||||||||||||| || ||||||||||||| |||||| ||||||||||||||| ||| | |    
T  38958959 aatatcttaacgagatataagaccaaaatgatacttataaataaagttagaggactcacataacacaaaatctaac-tttatttgaataaaattaacaaa 38959057  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||| |||  ||||| | || || ||||||||||||    
T  38959058 aaggactaaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 38959108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 9989611 - 9989708
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  9989611 acccacataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 9989708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 27186161 - 27186295
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||| | || |||||||||||||||      
T  27186161 acccatataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtgagaaacttagaggactgaaataaatcaa-t 27186259  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         ||||||||| |||||||||| ||||||||||    
T  27186260 ttttagttagaggaccaatctgataccaattaaata 27186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 24040247 - 24040103
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||| |  | || ||||||||||||      
T  24040247 acccacataacacaaactctaacgtttatttgaataaaactaatagaaaggactaaatgtagtaacggtgagaaacttagtggaccgaaataaatcaa-t 24040149  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaatacataaaggac 198  Q
         ||||||||| ||||| |||| ||||||||||  ||||||||    
T  24040148 ttttagttagaggaccaatccgataccaattaaatagttaaaggac 24040103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 27186088 - 27185967
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||| |||||| ||||| ||||||||||||||||| | |      
T  27186088 aataccttaacaaggcataagaccaaaatgatactaattaataaaattagaggacccacataaaacaaaccctaacatttatttgaataaaact-acagg 27185990  T
Q  100 aaggactaaatgtagtaacagtg 122  Q
    |||||||||||||||||| ||||    
T  27185989 aaggactaaatgtagtaaaagtg 27185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 36440362 - 36440228
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||  ||||| | || || ||||||||||||      
T  36440362 acccacataacacaaactctaacgtttatttgaataaaactaacagaaatgactaaatgtaataacagtgagaaacttagaggaccgaaataaatcaa-t 36440264  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaata 188  Q
         |||||||||||||||||||| ||| ||||||    
T  36440263 ttttagttagaggatcaatctgataccaactaaata 36440228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 16860462 - 16860368
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| |||| || ||||||||||||    
T  16860462 cacataacacaaactctaacgtttatttgaataaaactaacagaaaagactaaatgtagtaacggtgagaaacttaaaggaccgaaataaatcaa 16860368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 37424424 - 37424355
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  37424424 acccaaataacacaaactctaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacagtg 37424355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 11316244 - 11316339
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||||||||||||||  ||||| | || || ||||||||||||    
T  11316244 ccacataacacaaaccctaacgtttattcgaataaaattaatagaaaggactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 11316339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 2183231 - 2183328
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||| ||||||  ||| |||||||||||||||||||||| |||||||||||||||||||| |||  ||||| | ||||| ||||||||||||    
T  2183231 acccacataagacaaaccttaatgtttatttgaataaaactaatagaaaggactaaatgtagtaacggtgagaaacttacagaaccgaaataaatcaa 2183328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 39325573 - 39325477
Alignment:
Q  54 cccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| |||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||  ||||| | || || ||||||||||||    
T  39325573 cccacataacagaaaccctaacgtttatttgaataaaactaacagaaaggattaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 39325477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 32288237 - 32288171
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  32288237 ccacataacacaaac-ctaacgtttatttgaataaaactaatagaaatgactaaatgtagtaacagtg 32288171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 35569934 - 35569840
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||| || |||||||||||||||||  ||||| | || || ||||||||||||    
T  35569934 cacataacacaaaccctaacgtttatttgaataaaactaacagaaaagattaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 35569840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 39325645 - 39325740
Alignment:
Q  55 ccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||| ||||| ||  ||||| | || || ||||||||||||    
T  39325645 ccacataacacaaaccctaacgtttatttgaataaaactaacagaaagtactaaatgtaataacaatgagaaacttagaggaccgaaataaatcaa 39325740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 25182941 - 25183007
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaaca 119  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| ||| ||||    
T  25182941 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaggactaaatatagcaaca 25183007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 38958886 - 38958789
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||| |||||||  | |||||||||||||||||||||| | ||| ||||||||||||||||||||  ||||| | || || ||||||||||||    
T  38958886 acccacatagcacaaaccttgacgtttatttgaataaaactaacagaaatgactaaatgtagtaacagtgagaaacttagaggaccgaaataaatcaa 38958789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 29199109 - 29199017
Alignment:
Q  58 cataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||| ||||  ||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| ||||||  ||||||||||||    
T  29199109 cataacacaaaccctaaactttatttgaataaaactaacagaaatgactaaatgtagtaacggtgagaaacttaaagaatcgaaataaatcaa 29199017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 16860661 - 16860705
Alignment:
Q  7 ttaacaaggcatatgaccaaaatgatactaataaataaagttaga 51  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  16860661 ttaacaagacataagaccaaaatgatactaataaataaagttaga 16860705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16860538 - 16860588
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga 51  Q
    |||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  16860538 aatatcttaacaagacatggaaccaaaatgatactaataaataaagttaga 16860588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 34264510 - 34264477
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaa 86  Q
    ||||||||||||||||| ||||||||||||||||    
T  34264510 acccacataacacaaaccctaacgtttatttgaa 34264477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18488 - 18372
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| | |    
T  18488 aataccttaacaagacatatgaccaaaatgatactaataaataaaattagaggacccacataacacaaaccctaacgtttatttgaataaaactaacaga 18389  T
Q  100 aaggactaaatgtagta 116  Q
    |||||||||||||||||    
T  18388 aaggactaaatgtagta 18372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 18561 - 18705
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaann 152  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||| | || ||  |||||||||||      
T  18561 acccacataacacaaaccctaacgtttatttgaataaaactaacagaaaagactaaatgtagtaacagtgaaaaacttagaggaccaaaataaatcaa-t 18659  T
Q  153 nnnnngttagaggatcaatctgatatcaattaaatacataaaggac 198  Q
         ||||||||| ||||| |||| ||||||||||  ||||||||    
T  18660 ttttagttagaggaccaatccgataccaattaaataattaaaggac 18705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 72973 - 72827
Alignment:
Q  5 tcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaagg 103  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||||    
T  72973 tcttaacaaggaataagaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaataaaactaacagaaagg 72874  T
Q  104 actaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    | ||||||||||||| |||  ||||| | || || ||||||||||||    
T  72873 aataaatgtagtaacggtgagaaacttagaggaccgaaataaatcaa 72827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 73049 - 73146
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||| ||||||||||| | ||||||||||||||||||||||| | |||||||||||||||||||| |||  ||||| | || ||  |||||||||||    
T  73049 acccatataacacaaacccgaacgtttatttgaataaaactaacagaaaggactaaatgtagtaacggtgagaaacttagaggaccaaaataaatcaa 73146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 19918 - 19805
Alignment:
Q  6 cttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaagga 104  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| | ||| ||    
T  19918 cttaacaaggaatatgaccaaaatgatgctaataaataaagttagaggacccacataatacaaactctaacgtttatttgaataaaactaacagaaatga 19819  T
Q  105 ctaaatgtagtaac 118  Q
    ||||||||||||||    
T  19818 ctaaatgtagtaac 19805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 19996 - 20061
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  19996 acccatataacacaaaccctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 20061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 349288 - 349175
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | |    
T  349288 aataccttaacaaggaatatgaccaaaatgatactaataaataaagttagaggacccacataacgcaaactctaacgtttatttgaataaaactaacaga 349189  T
Q  100 aaggactaaatgta 113  Q
    || |||||||||||    
T  349188 aatgactaaatgta 349175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 113654 - 113723
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||| |||  |||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  113654 acccacataacactaaccttaacgtttatttgaataaaactaacagaaatgactaaatgtagtaacagtg 113723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 349361 - 349430
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtg 122  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  349361 acccacataacacaaaccctaacatttatttgaataaaattaacagaaaggactaaatgtagtaaaagtg 349430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 113581 - 113530
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag 52  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  113581 aataccttaacaaggcatagaaccaaaatgatactaataaataaagttagag 113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8643 - 8493
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||| | |    
T  8643 aataccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaacctcaacgtttatttgaataaaactaacaga 8544  T
Q  100 aaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||  ||||||| | |||||||||  ||||| |||| |  ||||||||||||    
T  8543 aaatactaaatattgtaacagtgagaaacttaaaggatcgaaataaatcaa 8493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 8716 - 8813
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||| |||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||  ||||| | |||||  |||||||||||    
T  8716 acccgcataacacaaaccctaacgtttatttgaataaaactaacagaaaagactaaatgtagtaacggtgagaaacttagagaacataaataaatcaa 8813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 21706 - 21577
Alignment:
Q  21 gaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaaca 119  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||| | ||||||||||||||||||||     
T  21706 gaccaaaatgatactaataaataaagttagaggacccacataacacaaaacctaac-tttatttgaataaaactaacaaaaaggactaaatgtagtaacg 21608  T
Q  120 gtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||  ||||| | || || ||||||||||||    
T  21607 gtgagaaacttagaggaccgaaataaatcaa 21577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 22462 - 22538
Alignment:
Q  74 acgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||  ||||| | || || ||||||||||||    
T  22462 acgtttatttgaataaaactaacagaaaggactaaatgtagtaatagtgagaaacttagaggaccgaaataaatcaa 22538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24377 - 24259
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| | |    
T  24377 aatatcttaacaaggaacaggaccaaaatgatgttaataaataaagttagaggacccacataacacaaaccctaacgtttatttgaaaaaaactaacaga 24278  T
Q  100 aaggactaaatgtagtaac 118  Q
    || ||||||||||| ||||    
T  24277 aatgactaaatgtaataac 24259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 150
Target Start/End: Original strand, 24456 - 24547
Alignment:
Q  59 ataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    ||||||||||| ||||||||||||||||||||| ||| | ||| ||||||||||||||||||||  ||||| | || ||  |||||||||||    
T  24456 ataacacaaaccctaacgtttatttgaataaaattaacagaaatgactaaatgtagtaacagtgagaaacttagaggaccaaaataaatcaa 24547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15663 - 15546
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaga-gacccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||     ||| | |    
T  15663 aatatcttaacaaggcataggacaaaaatgatactaataaataaagttagaggacccacataacacaaactcaaacatttatttgaat-----taacaga 15569  T
Q  100 aaggactaaatgtagtaacagtg 122  Q
    || ||||||||||||||||||||    
T  15568 aatgactaaatgtagtaacagtg 15546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 15736 - 15798
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||| | || ||| ||||||||||    
T  15736 acccacataacacaaaccctaacgtttatttgaataaaactaacagaagggattaaatgtagt 15798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6210 - 6094
Alignment:
Q  1 aatatcttaacaaggcatatgaccaaaatgatactaataaataaagttagag-acccacataacacaaactctaacgtttatttgaataaaactaatata 99  Q
    |||| ||||||||| ||||||| ||||||||||   |||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||| | |    
T  6210 aataccttaacaagacatatgatcaaaatgata---ataaataaagttagaggatccacataacacaaactctaatgtttatttgaataaaactaacaga 6114  T
Q  100 aaggactaaatgtagtaaca 119  Q
    || |||||||| ||||||||    
T  6113 aatgactaaatatagtaaca 6094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 6283 - 6348
Alignment:
Q  53 acccacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  6283 acccacataacacaaactctaacgtttatttgaataaaactaacagaaatgactaaatgtagtaac 6348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 14350 - 14256
Alignment:
Q  56 cacataacacaaactctaacgtttatttgaataaaactaatataaaggactaaatgtagtaacagtggaaaactcaaagaactgaaataaatcaa 150  Q
    |||||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||| ||| |||  ||||| | || || ||||||||||||    
T  14350 cacataacacaaactctaacgtttatttgaataaaactaacagaaatgactaaatatagcaacggtgagaaacttagaggaccgaaataaatcaa 14256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University