View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13692_high_3 (Length: 612)

Name: NF13692_high_3
Description: NF13692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13692_high_3
NF13692_high_3
[»] chr5 (53 HSPs)
chr5 (1-594)||(38341128-38341721)
chr5 (361-554)||(12576919-12577116)
chr5 (352-466)||(9235166-9235279)
chr5 (352-513)||(7359311-7359472)
chr5 (352-508)||(14749382-14749539)
chr5 (352-443)||(14667911-14668003)
chr5 (349-443)||(6889133-6889228)
chr5 (357-450)||(30588580-30588674)
chr5 (352-514)||(32516625-32516787)
chr5 (359-448)||(23980079-23980169)
chr5 (352-501)||(38684562-38684712)
chr5 (348-455)||(15252790-15252894)
chr5 (299-407)||(43557835-43557938)
chr5 (391-497)||(2713030-2713137)
chr5 (349-437)||(11675675-11675765)
chr5 (352-443)||(29922424-29922516)
chr5 (352-450)||(28015-28114)
chr5 (352-415)||(418084-418147)
chr5 (362-455)||(17340496-17340590)
chr5 (299-432)||(43475390-43475519)
chr5 (352-464)||(6859500-6859613)
chr5 (390-514)||(9917538-9917663)
chr5 (352-409)||(20367068-20367125)
chr5 (391-503)||(31636009-31636122)
chr5 (363-466)||(5305756-5305857)
chr5 (360-466)||(7678595-7678701)
chr5 (344-415)||(36200898-36200969)
chr5 (414-508)||(15489605-15489699)
chr5 (352-455)||(1275392-1275496)
chr5 (299-383)||(5860035-5860114)
chr5 (399-501)||(21952439-21952540)
chr5 (352-384)||(42504297-42504329)
chr5 (361-467)||(2066113-2066220)
chr5 (357-455)||(27998569-27998668)
chr5 (349-383)||(1104754-1104788)
chr5 (357-411)||(18350957-18351011)
chr5 (352-406)||(21193702-21193756)
chr5 (359-409)||(35615458-35615508)
chr5 (361-470)||(36123241-36123351)
chr5 (217-263)||(38341767-38341813)
chr5 (368-453)||(38501484-38501570)
chr5 (414-467)||(3775180-3775233)
chr5 (299-352)||(14665939-14665992)
chr5 (517-554)||(27249234-27249271)
chr5 (510-576)||(28676591-28676653)
chr5 (391-467)||(33667551-33667628)
chr5 (352-460)||(38685090-38685199)
chr5 (414-454)||(1001295-1001335)
chr5 (515-576)||(14667759-14667816)
chr5 (368-443)||(15168911-15168987)
chr5 (518-554)||(32516570-32516606)
chr5 (510-554)||(42199300-42199344)
chr5 (391-514)||(42199355-42199479)
[»] chr8 (60 HSPs)
chr8 (352-514)||(30559762-30559925)
chr8 (299-508)||(29520725-29520929)
chr8 (299-448)||(30198268-30198413)
chr8 (366-463)||(35643670-35643768)
chr8 (352-436)||(16035777-16035862)
chr8 (362-466)||(2216405-2216508)
chr8 (365-508)||(10079970-10080114)
chr8 (364-503)||(16917263-16917403)
chr8 (352-503)||(43904715-43904867)
chr8 (360-446)||(24399847-24399934)
chr8 (393-504)||(16351457-16351569)
chr8 (356-450)||(17491708-17491803)
chr8 (352-450)||(35914651-35914750)
chr8 (417-508)||(38178376-38178467)
chr8 (352-508)||(32931036-32931192)
chr8 (299-415)||(490504-490615)
chr8 (391-514)||(7531733-7531857)
chr8 (361-460)||(9904941-9905041)
chr8 (356-443)||(39967553-39967641)
chr8 (352-415)||(21425215-21425278)
chr8 (360-466)||(30783100-30783207)
chr8 (356-450)||(33827811-33827906)
chr8 (352-460)||(13589602-13589711)
chr8 (352-460)||(28169515-28169624)
chr8 (352-409)||(31715995-31716052)
chr8 (352-508)||(35362700-35362857)
chr8 (353-508)||(5908721-5908877)
chr8 (352-437)||(41444389-41444476)
chr8 (365-467)||(79143-79246)
chr8 (352-434)||(2518448-2518531)
chr8 (360-470)||(16994502-16994613)
chr8 (357-455)||(23023353-23023452)
chr8 (352-434)||(36069751-36069834)
chr8 (348-415)||(41971836-41971903)
chr8 (352-395)||(42584548-42584591)
chr8 (366-467)||(45512558-45512661)
chr8 (390-467)||(4011199-4011277)
chr8 (352-426)||(33076282-33076356)
chr8 (352-444)||(7615641-7615734)
chr8 (353-432)||(16705898-16705979)
chr8 (352-508)||(29700351-29700508)
chr8 (352-435)||(14459043-14459127)
chr8 (391-446)||(16971843-16971899)
chr8 (361-480)||(23492138-23492257)
chr8 (352-455)||(24558611-24558715)
chr8 (510-554)||(35643825-35643869)
chr8 (390-452)||(24739936-24739999)
chr8 (413-500)||(25985601-25985688)
chr8 (389-452)||(28269766-28269829)
chr8 (486-537)||(38668075-38668126)
chr8 (413-508)||(39953376-39953471)
chr8 (352-430)||(45041366-45041444)
chr8 (512-554)||(13171875-13171917)
chr8 (413-503)||(32043670-32043760)
chr8 (414-508)||(45331681-45331775)
chr8 (361-449)||(10108947-10109036)
chr8 (299-352)||(35324000-35324053)
chr8 (369-500)||(37826374-37826502)
chr8 (510-554)||(6483271-6483315)
chr8 (510-554)||(9695645-9695689)
[»] chr6 (26 HSPs)
chr6 (352-538)||(8364602-8364788)
chr6 (352-466)||(34555-34670)
chr6 (352-512)||(31818602-31818763)
chr6 (352-503)||(24665891-24666043)
chr6 (299-460)||(5095957-5096114)
chr6 (361-503)||(9593767-9593908)
chr6 (391-481)||(10617323-10617414)
chr6 (299-460)||(12890698-12890855)
chr6 (352-508)||(33997594-33997749)
chr6 (361-490)||(35199682-35199811)
chr6 (352-391)||(7513040-7513079)
chr6 (357-437)||(1748000-1748081)
chr6 (352-428)||(14389211-14389288)
chr6 (364-443)||(31831920-31832001)
chr6 (352-455)||(6055821-6055925)
chr6 (510-554)||(9593930-9593974)
chr6 (362-409)||(33080321-33080368)
chr6 (299-508)||(579493-579698)
chr6 (414-508)||(4948417-4948511)
chr6 (414-508)||(4955388-4955482)
chr6 (352-432)||(43102-43183)
chr6 (352-409)||(3210558-3210615)
chr6 (390-514)||(6906916-6907040)
chr6 (352-409)||(9568874-9568931)
chr6 (363-466)||(547111-547215)
chr6 (359-450)||(25493907-25493999)
[»] chr7 (61 HSPs)
chr7 (352-508)||(28627983-28628140)
chr7 (368-484)||(24549754-24549871)
chr7 (352-508)||(38135263-38135419)
chr7 (352-443)||(1569156-1569248)
chr7 (352-451)||(21517430-21517530)
chr7 (352-462)||(45601597-45601708)
chr7 (299-460)||(40979930-40980087)
chr7 (299-415)||(36101779-36101890)
chr7 (352-538)||(47796202-47796388)
chr7 (361-450)||(37976368-37976458)
chr7 (361-503)||(47848754-47848896)
chr7 (352-443)||(36239846-36239938)
chr7 (352-466)||(44401177-44401290)
chr7 (360-449)||(28858179-28858269)
chr7 (299-403)||(5418247-5418354)
chr7 (352-450)||(9210754-9210853)
chr7 (361-455)||(12966144-12966239)
chr7 (365-426)||(28542007-28542069)
chr7 (352-406)||(30814175-30814229)
chr7 (352-429)||(35922407-35922485)
chr7 (362-455)||(36136892-36136986)
chr7 (352-433)||(40391873-40391955)
chr7 (352-409)||(34341445-34341502)
chr7 (352-404)||(2882786-2882838)
chr7 (361-409)||(5577546-5577594)
chr7 (299-426)||(27893565-27893688)
chr7 (510-554)||(40169663-40169707)
chr7 (510-554)||(47848688-47848732)
chr7 (412-467)||(14593876-14593931)
chr7 (361-466)||(22174117-22174223)
chr7 (352-466)||(26741944-26742061)
chr7 (510-552)||(42187486-42187528)
chr7 (352-436)||(14057625-14057710)
chr7 (352-436)||(14367653-14367738)
chr7 (362-500)||(28359340-28359476)
chr7 (299-434)||(42187590-42187721)
chr7 (352-432)||(43281982-43282062)
chr7 (367-443)||(43282549-43282626)
chr7 (372-435)||(32368407-32368471)
chr7 (352-387)||(1758441-1758476)
chr7 (412-467)||(16013399-16013454)
chr7 (354-436)||(30664715-30664798)
chr7 (510-541)||(35713722-35713753)
chr7 (393-467)||(40830318-40830393)
chr7 (357-467)||(42177073-42177184)
chr7 (299-460)||(1011170-1011326)
chr7 (349-395)||(30997630-30997676)
chr7 (361-415)||(33732003-33732057)
chr7 (352-450)||(35713831-35713927)
chr7 (510-581)||(38920785-38920852)
chr7 (299-460)||(43491431-43491588)
chr7 (352-389)||(26332923-26332960)
chr7 (402-466)||(30814771-30814836)
chr7 (352-397)||(34926572-34926617)
chr7 (352-432)||(40138998-40139079)
chr7 (510-554)||(7189450-7189494)
chr7 (362-460)||(28562425-28562525)
chr7 (510-554)||(28628157-28628201)
chr7 (510-550)||(38135436-38135476)
chr7 (299-379)||(44951360-44951435)
chr7 (352-384)||(48515371-48515403)
[»] chr2 (61 HSPs)
chr2 (364-513)||(26784402-26784552)
chr2 (364-508)||(19235046-19235191)
chr2 (359-455)||(33287549-33287646)
chr2 (352-501)||(38435034-38435184)
chr2 (352-490)||(33504316-33504456)
chr2 (361-508)||(37470192-37470340)
chr2 (352-428)||(19336943-19337020)
chr2 (352-435)||(9496014-9496098)
chr2 (352-434)||(42149710-42149793)
chr2 (399-508)||(23714361-23714468)
chr2 (399-508)||(24102033-24102140)
chr2 (390-514)||(43832167-43832292)
chr2 (297-463)||(26670888-26671050)
chr2 (374-508)||(38860253-38860388)
chr2 (352-457)||(13149458-13149564)
chr2 (352-437)||(23915743-23915829)
chr2 (361-501)||(12141626-12141767)
chr2 (363-450)||(9556430-9556518)
chr2 (352-503)||(18958991-18959143)
chr2 (360-450)||(37452284-37452375)
chr2 (361-503)||(37481676-37481819)
chr2 (299-460)||(45543075-45543231)
chr2 (352-428)||(33625248-33625325)
chr2 (352-508)||(43751997-43752154)
chr2 (352-507)||(26850311-26850466)
chr2 (299-443)||(35755247-35755391)
chr2 (352-415)||(6219134-6219197)
chr2 (299-437)||(12734846-12734980)
chr2 (352-437)||(7134853-7134939)
chr2 (391-508)||(42543310-42543428)
chr2 (299-508)||(44437723-44437928)
chr2 (299-431)||(8197543-8197671)
chr2 (299-431)||(8202303-8202431)
chr2 (359-443)||(21834694-21834779)
chr2 (352-460)||(31959644-31959753)
chr2 (510-554)||(6218981-6219025)
chr2 (352-435)||(12882095-12882179)
chr2 (362-432)||(2377204-2377275)
chr2 (299-410)||(13474216-13474322)
chr2 (516-576)||(18958903-18958959)
chr2 (352-415)||(36650611-36650674)
chr2 (390-508)||(42092592-42092711)
chr2 (513-576)||(12141540-12141599)
chr2 (510-552)||(13240969-13241011)
chr2 (390-443)||(19024318-19024372)
chr2 (361-426)||(31254445-31254511)
chr2 (361-415)||(32402669-32402723)
chr2 (512-554)||(38860187-38860229)
chr2 (352-426)||(45077884-45077961)
chr2 (364-436)||(1626342-1626415)
chr2 (352-397)||(3720465-3720510)
chr2 (391-495)||(5759084-5759189)
chr2 (380-432)||(12443135-12443188)
chr2 (364-448)||(18188887-18188972)
chr2 (352-460)||(18424427-18424536)
chr2 (356-440)||(9578768-9578852)
chr2 (512-585)||(11412708-11412777)
chr2 (381-508)||(12026084-12026212)
chr2 (299-339)||(28960213-28960253)
chr2 (352-404)||(36366816-36366868)
chr2 (347-442)||(41545546-41545642)
[»] chr1 (78 HSPs)
chr1 (361-501)||(3818915-3819056)
chr1 (361-502)||(50806750-50806890)
chr1 (361-508)||(40416446-40416594)
chr1 (299-455)||(41560357-41560509)
chr1 (299-466)||(8796326-8796489)
chr1 (363-508)||(42501183-42501329)
chr1 (352-498)||(6025690-6025837)
chr1 (357-467)||(8342936-8343047)
chr1 (391-508)||(50771645-50771763)
chr1 (299-460)||(52561591-52561748)
chr1 (341-460)||(478801-478920)
chr1 (351-466)||(29577192-29577307)
chr1 (361-496)||(38868969-38869105)
chr1 (356-450)||(11941634-11941729)
chr1 (361-443)||(29128923-29129006)
chr1 (352-437)||(27520257-27520343)
chr1 (352-501)||(32404576-32404726)
chr1 (352-425)||(43375648-43375722)
chr1 (352-433)||(52532666-52532748)
chr1 (347-443)||(7762482-7762579)
chr1 (349-433)||(51812659-51812744)
chr1 (362-437)||(990518-990594)
chr1 (352-501)||(2544681-2544825)
chr1 (377-508)||(43423794-43423926)
chr1 (299-410)||(34444530-34444636)
chr1 (362-508)||(10569131-10569274)
chr1 (352-437)||(16142030-16142116)
chr1 (359-508)||(33560915-33561065)
chr1 (294-576)||(37462873-37463159)
chr1 (352-409)||(6084150-6084207)
chr1 (352-460)||(9599444-9599553)
chr1 (362-466)||(15577535-15577640)
chr1 (352-460)||(39318252-39318361)
chr1 (357-409)||(13827635-13827687)
chr1 (412-508)||(43898304-43898400)
chr1 (510-554)||(48431630-48431674)
chr1 (352-415)||(5338882-5338945)
chr1 (361-455)||(8203193-8203288)
chr1 (352-466)||(36339854-36339968)
chr1 (352-407)||(39776945-39777000)
chr1 (391-508)||(12261802-12261920)
chr1 (510-552)||(14226053-14226095)
chr1 (391-508)||(28528430-28528548)
chr1 (361-446)||(39515927-39516013)
chr1 (299-408)||(25715328-25715432)
chr1 (390-498)||(30834065-30834174)
chr1 (370-481)||(7921940-7922050)
chr1 (353-460)||(9509441-9509549)
chr1 (352-443)||(11331254-11331346)
chr1 (352-443)||(11489275-11489367)
chr1 (391-450)||(19969301-19969361)
chr1 (391-499)||(37263415-37263523)
chr1 (415-467)||(51584860-51584912)
chr1 (390-508)||(853873-853992)
chr1 (355-441)||(1661561-1661648)
chr1 (352-434)||(12930361-12930444)
chr1 (352-460)||(18469132-18469241)
chr1 (352-415)||(27072537-27072600)
chr1 (299-394)||(28090696-28090786)
chr1 (352-407)||(28511851-28511906)
chr1 (299-437)||(38807673-38807807)
chr1 (299-409)||(4707223-4707327)
chr1 (390-467)||(12231481-12231559)
chr1 (352-429)||(39140669-39140747)
chr1 (361-415)||(40920588-40920642)
chr1 (421-503)||(52160356-52160438)
chr1 (352-414)||(52900692-52900754)
chr1 (379-435)||(8676942-8676999)
chr1 (352-436)||(10200356-10200441)
chr1 (413-502)||(10272339-10272428)
chr1 (359-443)||(16272878-16272963)
chr1 (352-409)||(19908085-19908142)
chr1 (413-490)||(52442640-52442717)
chr1 (365-460)||(8628153-8628249)
chr1 (368-416)||(15438859-15438907)
chr1 (352-384)||(19822088-19822120)
chr1 (348-384)||(39896763-39896799)
chr1 (510-554)||(44905556-44905600)
[»] chr3 (58 HSPs)
chr3 (353-450)||(40116519-40116617)
chr3 (352-460)||(39600731-39600840)
chr3 (362-437)||(45289151-45289227)
chr3 (363-503)||(38430928-38431069)
chr3 (352-426)||(36304123-36304198)
chr3 (352-414)||(40116388-40116450)
chr3 (352-433)||(49841766-49841848)
chr3 (352-508)||(42026586-42026743)
chr3 (352-466)||(29475805-29475918)
chr3 (299-403)||(40106622-40106721)
chr3 (352-554)||(42510066-42510282)
chr3 (352-506)||(23534620-23534775)
chr3 (352-437)||(49042082-49042169)
chr3 (299-460)||(54128501-54128659)
chr3 (352-450)||(54365025-54365124)
chr3 (299-409)||(30797824-30797929)
chr3 (299-460)||(48508358-48508515)
chr3 (352-508)||(37598220-37598376)
chr3 (365-449)||(43308696-43308781)
chr3 (352-423)||(29601052-29601124)
chr3 (361-460)||(30294180-30294280)
chr3 (513-576)||(45289318-45289379)
chr3 (362-455)||(11284121-11284210)
chr3 (366-460)||(19162652-19162746)
chr3 (349-455)||(48953466-48953575)
chr3 (352-402)||(39208790-39208840)
chr3 (414-507)||(11581520-11581613)
chr3 (352-409)||(32170580-32170637)
chr3 (510-576)||(50960857-50960919)
chr3 (361-409)||(19758062-19758110)
chr3 (392-443)||(36820067-36820119)
chr3 (399-502)||(37351488-37351592)
chr3 (510-554)||(49503778-49503822)
chr3 (352-384)||(51027758-51027790)
chr3 (510-554)||(54128392-54128436)
chr3 (361-409)||(55244453-55244501)
chr3 (352-450)||(19676131-19676230)
chr3 (414-513)||(31261055-31261153)
chr3 (510-553)||(46431897-46431940)
chr3 (352-450)||(50960687-50960786)
chr3 (510-572)||(33272246-33272308)
chr3 (352-496)||(33755394-33755537)
chr3 (510-552)||(39235154-39235196)
chr3 (352-406)||(40991609-40991663)
chr3 (390-443)||(46431767-46431821)
chr3 (399-467)||(2340814-2340883)
chr3 (361-437)||(39235284-39235361)
chr3 (352-432)||(41842573-41842654)
chr3 (368-409)||(44571602-44571643)
chr3 (299-352)||(49503570-49503623)
chr3 (352-384)||(2195273-2195305)
chr3 (361-409)||(19737159-19737207)
chr3 (510-554)||(21200562-21200606)
chr3 (510-554)||(26490329-26490373)
chr3 (510-554)||(37534430-37534474)
chr3 (390-449)||(41452828-41452888)
chr3 (510-538)||(48734359-48734387)
chr3 (347-403)||(55384063-55384119)
[»] chr4 (83 HSPs)
chr4 (361-508)||(47147448-47147594)
chr4 (352-460)||(51421853-51421962)
chr4 (299-450)||(45204842-45204988)
chr4 (299-461)||(2557673-2557832)
chr4 (365-533)||(21945701-21945872)
chr4 (299-415)||(55007915-55008026)
chr4 (299-425)||(25574982-25575104)
chr4 (349-443)||(56439618-56439713)
chr4 (352-437)||(26024900-26024986)
chr4 (352-448)||(37488226-37488323)
chr4 (392-503)||(26356699-26356811)
chr4 (361-508)||(42639079-42639227)
chr4 (361-466)||(13805324-13805430)
chr4 (361-450)||(21107125-21107215)
chr4 (361-430)||(30621260-30621330)
chr4 (352-434)||(40420264-40420345)
chr4 (352-465)||(49987526-49987640)
chr4 (352-460)||(35690394-35690503)
chr4 (352-435)||(44384979-44385062)
chr4 (299-433)||(26037507-26037637)
chr4 (361-503)||(28351639-28351782)
chr4 (364-514)||(34233086-34233237)
chr4 (354-448)||(50680875-50680970)
chr4 (352-466)||(53540407-53540522)
chr4 (354-443)||(50662528-50662618)
chr4 (352-443)||(33225885-33225975)
chr4 (352-409)||(34208319-34208376)
chr4 (352-460)||(39708556-39708665)
chr4 (352-460)||(53518373-53518482)
chr4 (366-437)||(31043218-31043290)
chr4 (357-409)||(31339699-31339751)
chr4 (363-490)||(40018250-40018378)
chr4 (362-500)||(7681970-7682109)
chr4 (361-435)||(37042723-37042798)
chr4 (391-448)||(10209171-10209229)
chr4 (400-501)||(25967359-25967461)
chr4 (352-425)||(27049227-27049301)
chr4 (352-409)||(5306471-5306528)
chr4 (349-437)||(16003072-16003161)
chr4 (414-467)||(18966721-18966774)
chr4 (361-437)||(31403093-31403170)
chr4 (355-408)||(34379579-34379632)
chr4 (361-437)||(47372797-47372874)
chr4 (299-423)||(55388213-55388333)
chr4 (361-464)||(934490-934593)
chr4 (361-508)||(2589147-2589295)
chr4 (361-436)||(6843762-6843838)
chr4 (390-437)||(20047581-20047629)
chr4 (357-444)||(21214641-21214729)
chr4 (510-554)||(31459044-31459088)
chr4 (510-554)||(38570971-38571015)
chr4 (353-467)||(45184184-45184297)
chr4 (510-554)||(47611741-47611785)
chr4 (510-554)||(49987442-49987486)
chr4 (371-429)||(26024988-26025047)
chr4 (363-437)||(42293326-42293401)
chr4 (373-507)||(54470283-54470418)
chr4 (349-466)||(55768546-55768665)
chr4 (349-466)||(55832802-55832921)
chr4 (299-460)||(8286562-8286719)
chr4 (391-508)||(31897517-31897635)
chr4 (391-508)||(31961355-31961473)
chr4 (361-415)||(41192230-41192284)
chr4 (299-396)||(1095633-1095725)
chr4 (352-397)||(20601702-20601747)
chr4 (361-414)||(26510558-26510611)
chr4 (352-397)||(29398991-29399036)
chr4 (390-470)||(45569097-45569178)
chr4 (364-448)||(47612528-47612613)
chr4 (414-467)||(48033201-48033254)
chr4 (352-437)||(50967078-50967163)
chr4 (352-380)||(3979124-3979152)
chr4 (381-432)||(7544602-7544654)
chr4 (414-450)||(8599054-8599090)
chr4 (349-456)||(12494790-12494898)
chr4 (349-397)||(22873646-22873694)
chr4 (510-554)||(28236197-28236241)
chr4 (510-554)||(28497504-28497547)
chr4 (510-538)||(35690322-35690350)
chr4 (510-554)||(37773675-37773719)
chr4 (414-454)||(38903831-38903870)
chr4 (391-466)||(46372141-46372217)
chr4 (510-554)||(51252685-51252729)
[»] scaffold0018 (2 HSPs)
scaffold0018 (391-449)||(178509-178568)
scaffold0018 (510-576)||(44092-44154)
[»] scaffold0010 (1 HSPs)
scaffold0010 (352-442)||(160374-160465)
[»] scaffold0373 (1 HSPs)
scaffold0373 (361-436)||(2360-2436)
[»] scaffold0015 (1 HSPs)
scaffold0015 (352-450)||(66670-66770)
[»] scaffold0325 (1 HSPs)
scaffold0325 (399-467)||(11913-11982)
[»] scaffold0025 (1 HSPs)
scaffold0025 (349-402)||(39501-39554)
[»] scaffold0157 (1 HSPs)
scaffold0157 (349-456)||(25579-25687)
[»] scaffold0050 (1 HSPs)
scaffold0050 (352-384)||(58276-58308)


Alignment Details
Target: chr5 (Bit Score: 507; Significance: 0; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 1 - 594
Target Start/End: Original strand, 38341128 - 38341721
Alignment:
Q  1 atgaagaaacagaagttggcaacgatgagagatggattgcagggttcccaaccatcttcaaaccaacctccttgctcaaaactcagaagttctatctatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38341128 atgaagaaacagaagttggcaacgatgagagatggattgcagggttgccaaccatcttcaaaccaacctccttgctcaaaactcagaagttctatctatc 38341227  T
Q  101 aaggnnnnnnngttttgatctgcagtaactgcacaattgaactagaaatcaaaatcatataaatcttaaccaggaatgaattcataaaaattgaaaaggt 200  Q
    ||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38341228 aaggaaaaaaagttttgatctgcagtaactgcacaattgaactagaaatcaaaatcatataaatcttaaccaggaatgaattcataaaaattgaaaaggg 38341327  T
Q  201 ggacaaaaaggtaaacccaaaataacattaatcaattatttaattccaaataatctaataacaaaagtaatttaacacaaaaaagaattcaagaaacaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38341328 ggacaaaaaggtaaacccaaaataacattaatcaattatttaattccaaataatctaataacaaaagtaatttaacacaaaaaagaattcaagaaacaaa 38341427  T
Q  301 caacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgat 400  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  38341428 caacaaccaacccttatcccactaaatagcgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaa---at 38341524  T
Q  401 taatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttact 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38341525 taatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttact 38341624  T
Q  501 acataa-------tcaacatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaacttcctctctagtctctaa 593  Q
    ||||||       ||||||| ||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  38341625 acataatcaacattcaacatacccaaaccacctaagcctattttccactgtcttttcta----ctatagctgctaccccaacttcctctctagtctctaa 38341720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 361 - 554
Target Start/End: Original strand, 12576919 - 12577116
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||| ||||||||| |||||| ||| || ||||| ||||||||||| ||||| ||||||||||| |||| ||||| ||||| |||||| |||  |||    
T  12576919 cataatggtctatcatataccatatttctattcaactcattaatctctagatctttcttaatagtttatcttgtagtttttctaggtcttcctctgcctc 12577018  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttactacat-aatcaacatg--cccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||  || | ||||||||||| ||||| ||||||||||| |  ||| |||||  |||||||||| |||| ||| |||||||  |||||||||||    
T  12577019 tagtgataggactaccctccatctgatctactctccttactacttctatctacatgcccccaaaccacataagtctagtttccaccatcttttctact 12577116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 466
Target Start/End: Complemental strand, 9235279 - 9235166
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| | |||||||||||||||||||||||| ||||||||| || ||||||||||||||| |||||||||||||||||  ||||| ||||| ||||||    
T  9235279 aaattatgccataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagtttctct--tagtttttctaggtcttc 9235182  T
Q  451 atctaactctagtgat 466  Q
     |||  ||||||||||    
T  9235181 ctctgcctctagtgat 9235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 352 - 513
Target Start/End: Original strand, 7359311 - 7359472
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||| ||||||||||| | | |||| ||||||||||||||| ||| ||||| |  |||    
T  7359311 aaattacgtcataatgtt-tatcgtaaaccatatttcgatccaacttattaatctctagatttttctaaatagtttctcttatggtttttctaggctttc 7359409  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacat 513  Q
     |||  ||||||||||  || |  |||||||||| ||||| |||||||||||| |||| ||||    
T  7359410 ctctgcctctagtgatatgactatcctccatctgatctactctccttactacagaatctacat 7359472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 352 - 508
Target Start/End: Complemental strand, 14749539 - 14749382
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||| |||| |||||||||| |||||||| ||| ||||||||  |||||||||| ||| ||||| |||||||||||||||||| ||||| ||||||    
T  14749539 aaatgacgccatagtgttctatcaaaaaccatatttctatccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtcttc 14749440  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     |||  || |||||||| || | ||||||||||| || || |||||||| ||| ||||    
T  14749439 ctctgcctttagtgatttgactcccctccatctgatcgactctccttacaacagaatc 14749382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 443
Target Start/End: Complemental strand, 14668003 - 14667911
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 443  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||| ||| ||||||||||||| |||||    
T  14668003 aaattacaccataatgttctatcataaaccatacttggatccaactcattaatctctagatctttcttagtagcttctcttatagtttttcta 14667911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 349 - 443
Target Start/End: Complemental strand, 6889228 - 6889133
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 443  Q
    ||||||||||| |||||||||||||||||||||||| || |  |||||| ||||||||||| ||| ||| |||||||||||||||||||| |||||    
T  6889228 attaaattacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaatctttcctaatagtttctcttatagtttttcta 6889133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 357 - 450
Target Start/End: Complemental strand, 30588674 - 30588580
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||| ||||||| ||| ||||||| | |||||||||||||| ||||| ||||||    
T  30588674 acgtcataatgttctattataaaccatatttcgatccaactcattcatctctagatctttcttaacaatttctcttatagtttttctaggtcttc 30588580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 514
Target Start/End: Complemental strand, 32516787 - 32516625
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||||||||||| ||||||||||||||||| ||  ||||||||  |||||||||| |||| || |||||||||||||||||||| || || ||||||    
T  32516787 aaattacgtcataatattctatcataaaccatatttgaatccaacttgttaatctctaaatctgctctaatagtttctcttatagtt-ttttaggtcttc 32516689  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacatg 514  Q
     |||| |||| || ||  ||||  ||| |||| | ||||| |||| ||||||| |||| |||||    
T  32516688 ctctacctcttgtaatctgattatccttcatccgatctactctccatactacagaatctacatg 32516625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 448
Target Start/End: Complemental strand, 23980169 - 23980079
Alignment:
Q  359 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtct 448  Q
    |||||| ||||||||||||||||||| || ||||||||| |||||||| || ||| |||| ||||||||||||||| ||||||||| ||||    
T  23980169 gtcatattgttctatcataaaccatatttagatccaactcattaatctataaatcattctcaatagtttctcttattgttcttctaggtct 23980079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 352 - 501
Target Start/End: Complemental strand, 38684712 - 38684562
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||| |||||||||||||||   |||||| ||| |||||||| ||||||||||| ||| ||||||| |||||||||| ||||| ||||| ||||||    
T  38684712 aaataacgccataatgttctatcaagtaccatatttctatccaactaattaatctctagatctttcttaaaagtttctcttgtagtttttctaggtcttc 38684613  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttacta 501  Q
     | ||  |||||||||| || | ||||||||||  | ||| ||||||||||    
T  38684612 ctttacatctagtgattggaatcccctccatctaatatactctccttacta 38684562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 348 - 455
Target Start/End: Original strand, 15252790 - 15252894
Alignment:
Q  348 aattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtc 447  Q
    ||||||| ||| |||||||||||||||||||||| || ||||||||||||  ||||||| |||   |||| | |||||||| |||||||||||| |||||    
T  15252790 aattaaactacatcataatgttctatcataaaccctatttcgatccaactcgttaatctatat---ttctcattagtttcttttatagttcttcgaagtc 15252886  T
Q  448 ttcatcta 455  Q
    ||| ||||    
T  15252887 ttcctcta 15252894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 407
Target Start/End: Original strand, 43557835 - 43557938
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||  |||||||||||||| | | |||| |||| |||||||| ||||     |||||||||||||||||||||||||| ||||||||||||     
T  43557835 aacaacaaccaggccttatcccactaagtggggtcggctacatagatcaacttaa-----gtcataatgttctatcataaaccatatttcgatccaactc 43557929  T
Q  399 attaatctc 407  Q
    | |||||||    
T  43557930 aataatctc 43557938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 391 - 497
Target Start/End: Complemental strand, 2713137 - 2713030
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| ||| ||||||| ||| |||||||||||||||||||||||| ||||| ||||||  || |||||||||||| || |  |||||||||| ||||    
T  2713137 tccaactcattcatctctagatccttcttaatagtttctcttatagtttttctaggtcttcccctgactctagtgatttgactctcctccatctgatcta 2713038  T
Q  490 ccctcctt 497  Q
    | ||||||    
T  2713037 ctctcctt 2713030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 349 - 437
Target Start/End: Complemental strand, 11675765 - 11675675
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatactt-cgatccaactgattaatctctatatct-tcttaatagtttctcttatagtt 437  Q
    |||||| |||| |||||||||||||||||||||||| ||   |||||||| ||||||||||| |||| || ||||||||||||||||||||    
T  11675765 attaaactacgccataatgttctatcataaaccatatttaaaatccaactcattaatctctaaatctgtcctaatagtttctcttatagtt 11675675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 443
Target Start/End: Complemental strand, 29922516 - 29922424
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 443  Q
    |||||||| |||||||||||||| |||||||   |||  |||||||  |||||||||| ||||| |||||||||||||||||||||| |||||    
T  29922516 aaattacgccataatgttctatcgtaaaccaggtttcagtccaacttgttaatctctaaatctttcttaatagtttctcttatagtttttcta 29922424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 450
Target Start/End: Complemental strand, 28114 - 28015
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| | |||| |||||||||| ||| |||| || ||||||||| ||||| ||||| ||||| | |||||||||||||||||||| ||||| ||||||    
T  28114 aaattatgccatagtgttctatcagaaatcatatttggatccaacttattaacctctaaatctttcctaatagtttctcttatagtttttctaggtcttc 28015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 415
Target Start/End: Original strand, 418084 - 418147
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    |||||||| |||||||||||||||||||||| | || ||||||||| ||||||||||| |||||    
T  418084 aaattacgccataatgttctatcataaaccacatttggatccaactcattaatctctaaatctt 418147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 362 - 455
Target Start/End: Original strand, 17340496 - 17340590
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    |||||||| |||||||||||||| || |||| |||| ||||| ||||| ||| |||||||||||| |  ||||| || |||||||||||||||||    
T  17340496 ataatgttatatcataaaccatatttggatcaaactcattaacctctaaatctttcttaatagttacaattataatttttctaagtcttcatcta 17340590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 299 - 432
Target Start/End: Complemental strand, 43475519 - 43475390
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||| ||| | | || | |||||| |||||||||| |      ||||| |||||| |||||| |||| ||||||||||||     
T  43475519 aacaacaaccaagccttatcccattaagtggagttggctacgtggatcaaattacac-----cataacgttctaccataaatcatatttcgatccaactc 43475425  T
Q  399 attaatctctatatc-ttcttaatagtttctctta 432  Q
    ||||||||||  ||| |||||||||||||||||||    
T  43475424 attaatctctggatctttcttaatagtttctctta 43475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 6859613 - 6859500
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| | |||||||||||||||||||||||| || |  |||| | | |||||| || ||||| | |||||||||||||||||||| ||||| ||||||    
T  6859613 aaattatgccataatgttctatcataaaccatattttggcccaagtaactaatctgtaaatctttcctaatagtttctcttatagtttttctaggtcttc 6859514  T
Q  451 atctaactctagtg 464  Q
     |||  ||||||||    
T  6859513 ctcttcctctagtg 6859500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 390 - 514
Target Start/End: Original strand, 9917538 - 9917663
Alignment:
Q  390 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 488  Q
    |||||||| ||| ||||||||||||| || |||||||||||| |||||| ||||| ||| || |||  |||| |||||| || |  |||||||||| ||     
T  9917538 atccaactcattgatctctatatctttctaaatagtttctctaatagtttttctaggtcatcctctgtctcttgtgatttgactatcctccatctgatcg 9917637  T
Q  489 accctccttactacataatcaacatg 514  Q
    || ||| |||||||| ||||||||||    
T  9917638 actctctttactacaaaatcaacatg 9917663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 20367125 - 20367068
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||||||||||||| | |||||||||||| || ||||||||| |||||||||||    
T  20367125 aaattacgtcataatgttatgtcataaaccatatttggatccaactcattaatctcta 20367068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 503
Target Start/End: Original strand, 31636009 - 31636122
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| ||| ||||||||||| ||||| ||||||||||| |||||| |||||  |||||  ||| ||||||||||| || | ||| ||||||  ||||    
T  31636009 tccaactcattgatctctatatccttcttgatagtttctctaatagtttttctagatcttcccctatctctagtgatttgactccccaccatctaatcta 31636108  T
Q  490 ccctccttactaca 503  Q
    | ||||||||||||    
T  31636109 ctctccttactaca 31636122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 466
Target Start/End: Complemental strand, 5305857 - 5305756
Alignment:
Q  363 taatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctag 462  Q
    ||||||||||||||||||| || || ||||||||| ||||||| |  ||| ||| | |||||||||| ||||||| ||||| |||||| |||  ||||||    
T  5305857 taatgttctatcataaaccttatttggatccaactcattaatcac--tattttcatgatagtttctcatatagtttttctaggtcttcctctgcctctag 5305760  T
Q  463 tgat 466  Q
    ||||    
T  5305759 tgat 5305756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 466
Target Start/End: Complemental strand, 7678701 - 7678595
Alignment:
Q  360 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaact 458  Q
    |||||||||| ||| ||||||| || |||||||||||| ||||||||||| ||| |||| ||||||||||||||| ||| | |||  ||||| |||  ||    
T  7678701 tcataatgtt-tattataaaccgtatttcgatccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcct 7678603  T
Q  459 ctagtgat 466  Q
    ||||||||    
T  7678602 ctagtgat 7678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 344 - 415
Target Start/End: Complemental strand, 36200969 - 36200898
Alignment:
Q  344 atcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    ||||||| |||||||||||||| |||  ||||| ||||||| || ||||||||| ||||| |||||||||||    
T  36200969 atcaaatgaaattacgtcataaagtttgatcatgaaccatatttggatccaactcattaacctctatatctt 36200898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 508
Target Start/End: Original strand, 15489605 - 15489699
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||||||||||||||||||| ||| ||||| |||||| |||  |||||||||||| | |  |||||||||  ||||| ||||||| |||| ||||    
T  15489605 ttcttaatagtttctcttattgtttttctaggtcttcctctgcctctagtgattcaactatcctccatctaatctactctccttaatacaaaatc 15489699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 455
Target Start/End: Complemental strand, 1275496 - 1275392
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||||||||||||||||||| | |||| | || ||| ||||||||||| ||||| || |||  |||| |||||||| |||||| ||||| ||||||    
T  1275496 aaatgacgtcataatgttctatcaaacaccaaatttggattcaactgattaacctctaaatcctttataatggtttctctaatagtttttctaggtcttc 1275397  T
Q  451 atcta 455  Q
     ||||    
T  1275396 ctcta 1275392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 383
Target Start/End: Complemental strand, 5860114 - 5860035
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccat 383  Q
    |||||||| ||| |||||||||||||| ||| |||| |||| ||||||||||||     || ||||||| |||||||||||||||    
T  5860114 aacaacaatcaagccttatcccactaagtagggtcggctacatagatcaaatta-----cgccataatggtctatcataaaccat 5860035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 501
Target Start/End: Complemental strand, 21952540 - 21952439
Alignment:
Q  399 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 497  Q
    ||||||||||| ||| |||| |||||||||||  |||||| ||||| ||||||  ||| ||||||||||| || | ||||||||||| ||||  ||||||    
T  21952540 attaatctctagatccttctcaatagtttctc--atagtttttctaggtcttcccctacctctagtgatttgactcccctccatctgatctattctcctt 21952443  T
Q  498 acta 501  Q
    ||||    
T  21952442 acta 21952439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 384
Target Start/End: Original strand, 42504297 - 42504329
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccata 384  Q
    |||||||||||||||||||||||||||||||||    
T  42504297 aaattacgtcataatgttctatcataaaccata 42504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 467
Target Start/End: Complemental strand, 2066220 - 2066113
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||||| ||||||| ||||| ||| ||  |||||||| ||||||||||| ||| || ||| |||||||| ||||| || ||||| ||||||||  | |||    
T  2066220 cataattttctatcgtaaactataattttatccaactcattaatctctagatcttttttagtagtttcttttataatttttctaggtcttcatgcatctc 2066121  T
Q  460 tagtgatt 467  Q
    ||||||||    
T  2066120 tagtgatt 2066113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 455
Target Start/End: Complemental strand, 27998668 - 27998569
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    |||||||||| |||||||||| | |||  | | ||| |||| |||||||| || ||||| |||| ||||||||||||||||| ||||| |||||| ||||    
T  27998668 acgtcataatattctatcatatatcatgttcctatctaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctcta 27998569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 383
Target Start/End: Original strand, 1104754 - 1104788
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccat 383  Q
    ||||||||||| |||||||||||||||||||||||    
T  1104754 attaaattacgccataatgttctatcataaaccat 1104788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 411
Target Start/End: Original strand, 18350957 - 18351011
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata 411  Q
    |||||||||||||||| || | |||||| ||| |||||||| |||||||||||||    
T  18350957 acgtcataatgttctaacaaataccatatttctatccaactcattaatctctata 18351011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 21193702 - 21193756
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatct 406  Q
    |||||| ||||||||| |||||||||||||||| ||| ||||||||  |||||||    
T  21193702 aaattatgtcataatgatctatcataaaccatatttctatccaactctttaatct 21193756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 409
Target Start/End: Complemental strand, 35615508 - 35615458
Alignment:
Q  359 gtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||||||||||||||||| ||| ||  |||||||| |||||||||||    
T  35615508 gtcataatgttctatcataaactatatttttatccaactcattaatctcta 35615458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 36123241 - 36123351
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||||||||||||| | |||||  | |   |||| ||||||||||| ||| ||||| || ||||| ||||||| | |||||||||||| | || |||    
T  36123241 cataatgttctatcatatatcatacccctacataactcattaatctctagatccttcttgatggtttcccttatagcttttctaagtcttcctttacctc 36123340  T
Q  460 tagtgattcga 470  Q
    |||||||||||    
T  36123341 tagtgattcga 36123351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 38341767 - 38341813
Alignment:
Q  217 ccaaaataacattaatcaattatttaattccaaataatctaataaca 263  Q
    |||||||||||| |||||| |||||||||||||| | ||||||||||    
T  38341767 ccaaaataacatgaatcaactatttaattccaaagattctaataaca 38341813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 453
Target Start/End: Original strand, 38501484 - 38501570
Alignment:
Q  368 ttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatc 453  Q
    |||||||||||| |||| || ||||||||| ||| | ||||| || |||  ||||||||||| |||||||||| ||| |||||||||    
T  38501484 ttctatcataaatcatatttggatccaacttattgacctctaaatactttctaatagtttcttttatagttctcctaggtcttcatc 38501570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 467
Target Start/End: Original strand, 3775180 - 3775233
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    ||||||||||||| |||||||||| ||||| |||||| |||  |||||||||||    
T  3775180 ttcttaatagtttatcttatagtttttctaggtcttcttctgcctctagtgatt 3775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 14665992 - 14665939
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaatta 352  Q
    |||||||||||| |||||||||||||| | | |||| |||| ||||||||||||    
T  14665992 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatta 14665939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 554
Target Start/End: Complemental strand, 27249271 - 27249234
Alignment:
Q  517 caaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  27249271 caaaccacctaagcctaatttccactttcttttctact 27249234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 576
Target Start/End: Complemental strand, 28676653 - 28676591
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 576  Q
    ||||||| |||||||||||| |||||||||||  |||||||||    ||||||||||||||| ||||    
T  28676653 acatgccgaaaccacctaagactattttccaccatcttttcta----ctatagctgctacccgaact 28676591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 467
Target Start/End: Complemental strand, 33667628 - 33667551
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    ||||||| ||||||||||| ||| |||||||||  ||||||||||||| ||||| ||||||  |||  ||||||||||    
T  33667628 tccaactcattaatctctagatccttcttaataacttctcttatagtttttctaggtcttcccctacatctagtgatt 33667551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 38685199 - 38685090
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||| |||| ||||||||||||||||||| || ||||||||| ||| | ||||| || |||  |||| |||||||| |||||| | ||| ||||||    
T  38685199 aaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttc 38685100  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  38685099 ctctacctct 38685090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 454
Target Start/End: Original strand, 1001295 - 1001335
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatct 454  Q
    |||||||||||||| ||||||||| ||||| ||||||||||    
T  1001295 ttcttaatagtttcacttatagtttttctaggtcttcatct 1001335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 576
Target Start/End: Complemental strand, 14667816 - 14667759
Alignment:
Q  515 cccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 576  Q
    ||||||||||||||| |||||||||||  |||||||||    |||||| |||||||||||||    
T  14667816 cccaaaccacctaagtctattttccaccatcttttcta----ctataggtgctaccccaact 14667759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 15168987 - 15168911
Alignment:
Q  368 ttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttcta 443  Q
    |||||||||||||||||  | ||||||||| ||||| ||||| | | ||| ||| |||||||||||||||| |||||    
T  15168987 ttctatcataaaccatatctggatccaacttattaacctctaaatttttcctaacagtttctcttatagtttttcta 15168911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 518 - 554
Target Start/End: Complemental strand, 32516606 - 32516570
Alignment:
Q  518 aaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||||||  |||||||||||    
T  32516606 aaaccacctaagcctattttccaccatcttttctact 32516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 42199344 - 42199300
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||||||||||||||| ||| |||||||  |||||||||||    
T  42199344 acatgcccaaaccacctaagtctagtttccaccatcttttctact 42199300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 391 - 514
Target Start/End: Complemental strand, 42199479 - 42199355
Alignment:
Q  391 tccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| |||||| |||| ||||| || |||||||| ||| |||||| ||||| |||||  |||  | ||||||||| || | | |||||| || ||||    
T  42199479 tccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgatcta 42199380  T
Q  490 ccctccttactacataatcaacatg 514  Q
    | |||||||||||| |||| |||||    
T  42199379 ctctccttactacagaatctacatg 42199355  T

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Target: chr8 (Bit Score: 76; Significance: 8e-35; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 352 - 514
Target Start/End: Complemental strand, 30559925 - 30559762
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||||||||||||||||||||||||||||  | ||||||||| ||||||||||| ||| ||| | |||||||||||||||||| || |||||||||    
T  30559925 aaattacgtcataatgttctatcataaaccatatatggatccaactcattaatctctaaatctttcctgatagtttctcttatagtttttttaagtcttc 30559826  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacatg 514  Q
    ||||| |||||||||| ||| |  |||||||||| || ||  ||||||||||| |||| |||||    
T  30559825 atctatctctagtgatccgactatcctccatctgatccactgtccttactacaaaatctacatg 30559762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 299 - 508
Target Start/End: Complemental strand, 29520929 - 29520725
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| | |||||||||||||| | || | |||| | ||||||||||     || |||||||||||||||||||||||| || |||||||||     
T  29520929 aacaacaaccaagcattatcccactaaatggggtgggctacatggatcaaatta-----cgccataatgttctatcataaaccatatttggatccaactc 29520835  T
Q  399 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 497  Q
    ||||||||||| ||| ||| ||| |||||||||||||||| |||| || |||| |||| |||| |||||| || |  |||||||||| ||||| ||||||    
T  29520834 attaatctctaaatcgttcctaacagtttctcttatagtttttct-aggcttcctctacctcttgtgatttgactatcctccatctgatctactctcctt 29520736  T
Q  498 actacataatc 508  Q
    |||||| ||||    
T  29520735 actacaaaatc 29520725  T

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Target: chr8; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 299 - 448
Target Start/End: Original strand, 30198268 - 30198413
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| | || ||||||||| || |      |||||| ||||||||||||||||| | ||||||||||     
T  30198268 aacaacaaccaagccttatcccactaagtggggtcggcaacatagatcaaactacac-----cataatattctatcataaaccatattccgatccaactc 30198362  T
Q  399 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtct 448  Q
    ||||||||| ||||| ||||||||| |||||||||||||| ||||||||||    
T  30198363 attaatctcaatatctttcttaataatttctcttatagtttttctaagtct 30198413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 366 - 463
Target Start/End: Original strand, 35643670 - 35643768
Alignment:
Q  366 tgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagt 463  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||| |||||||||||||| ||||| |||||| |||  |||||||    
T  35643670 tgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctctgcctctagt 35643768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 16035777 - 16035862
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagt 436  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||| ||  ||||||| |||||||||||||||    
T  16035777 aaattacgtcataatgttctaccataaaccatatttcgatccaactaagtaatctctagatatttcttaacagtttctcttatagt 16035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 2216508 - 2216405
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactcta 461  Q
    ||||||||||||||||||| ||| |  ||||||||| ||| ||||||| |||||||||||||||||||||||  || ||||| |||||| |||| |||||    
T  2216508 ataatgttctatcataaac-atattaggatccaactcattgatctctaaatcttcttaatagtttctcttatgttttttctaggtcttcctctacctcta 2216410  T
Q  462 gtgat 466  Q
    |||||    
T  2216409 gtgat 2216405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 365 - 508
Target Start/End: Original strand, 10079970 - 10080114
Alignment:
Q  365 atgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagt 463  Q
    ||||||||||| | | |||| ||| |||||||| ||||||||||| ||||| ||||| ||||| ||||||||||  |||| |||||| |||| |||||||    
T  10079970 atgttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtcttcctctacctctagt 10080069  T
Q  464 gattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||| || | |||| ||| || ||||| |||||||||||| ||||    
T  10080070 gatttgactccccttcatttgatctactctccttactacaaaatc 10080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 364 - 503
Target Start/End: Complemental strand, 16917403 - 16917263
Alignment:
Q  364 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctag 462  Q
    |||||||||||||| |||||| ||| |||||||| ||||||||||| ||||| ||| |||||||| | ||||| | ||||| |||||| |||| || |||    
T  16917403 aatgttctatcatataccatatttctatccaactcattaatctctaaatcttccttgatagtttcacctatagcttttctaggtcttcttctacctgtag 16917304  T
Q  463 tgattcgattgccctccatctggtctaccctccttactaca 503  Q
    ||||| || |  |||| ||||| ||||| ||||||||||||    
T  16917303 tgatttgactatcctcaatctgatctactctccttactaca 16917263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 503
Target Start/End: Original strand, 43904715 - 43904867
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||| |||| || |||  ||||||||||||||  ||||| ||||||    
T  43904715 aaattacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaatctctcataaccgtttctcttatagtatttctaggtcttc 43904814  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactaca 503  Q
     | || |||| || ||| || |  |||||||||| ||||  || |||||||||    
T  43904815 ctgtacctcttgtaatttgactatcctccatctgatctattcttcttactaca 43904867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 360 - 446
Target Start/End: Original strand, 24399847 - 24399934
Alignment:
Q  360 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagt 446  Q
    ||||||| ||||||||||||||||| ||| |||||||| ||||||||| | || |||||||||||||||||||||| || ||||||||    
T  24399847 tcataatattctatcataaaccatatttcaatccaactcattaatctcgagatccttcttaatagtttctcttataatttttctaagt 24399934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 393 - 504
Target Start/End: Complemental strand, 16351569 - 16351457
Alignment:
Q  393 caactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctacc 491  Q
    ||||| ||||||||||| ||| ||||||||||||||||| |||||| ||||| ||||||  ||| ||| ||||| | || | ||||||||||| |||||     
T  16351569 caactcattaatctctagatccttcttaatagtttctctaatagtttttctaggtcttctcctatctcaagtgacttgactcccctccatctgatctact 16351470  T
Q  492 ctccttactacat 504  Q
    |||||||||||||    
T  16351469 ctccttactacat 16351457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 356 - 450
Target Start/End: Original strand, 17491708 - 17491803
Alignment:
Q  356 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| |||||||||||||||||||||||| || | ||||||| ||||||||| |  || ||||||||||||||||||| |||| ||||| ||||||    
T  17491708 tacgccataatgttctatcataaaccatattttggtccaactcattaatctccaagtctttcttaatagtttctcttacagtttttctaggtcttc 17491803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 35914651 - 35914750
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||||||||||||||||||||| || | ||||||| ||||||||  |  || ||| |||||||||||||||||||| ||||| ||||||    
T  35914651 aaattacgccataatgttctatcataaaccatattttggtccaactcattaatcttcaagtctttcctaatagtttctcttatagtttttctatgtcttc 35914750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 38178376 - 38178467
Alignment:
Q  417 ttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    ||||||||||||||||||||| ||||| |||||| |||| |||||| |||| || |  |||||||||| ||||| |||||||||||| ||||    
T  38178376 ttaatagtttctcttatagtttttctaggtcttcctctacctctagcgatttgactatcctccatctgatctactctccttactacaaaatc 38178467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 508
Target Start/End: Complemental strand, 32931192 - 32931036
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| | ||||||||||||||||| |||||| |||| ||||||| |||||| || | ||| ||| ||||||||||||| |||||| || || ||||||    
T  32931192 aaattatgccataatgttctatcatacaccatatttcg-tccaactcattaatttcaaaatctttcctaatagtttctctgatagtttttttaggtcttc 32931094  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     |||  ||||||||||  || |  |||||||||| ||||  |||||||||||| ||||    
T  32931093 ctctgcctctagtgatatgactatcctccatctgatctagtctccttactacagaatc 32931036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 415
Target Start/End: Complemental strand, 490615 - 490504
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||| ||| |||||||||||||| | | |||| |||| | ||||||||||     || |||||||||||||||||||||||| || |||||||||     
T  490615 aacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccataatgttctatcataaaccatatttggatccaactc 490521  T
Q  399 attaatctctatatctt 415  Q
    || |||||||| |||||    
T  490520 atcaatctctaaatctt 490504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 7531733 - 7531857
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| ||| ||||||| ||| ||| |||||||||||| ||||||| ||||| |||| |   || ||||||||||  || | ||||||||||| ||||    
T  7531733 tccaactcatttatctctagatccttcctaatagtttctcgtatagtttttctaggtctacccttacctctagtgatctgactcccctccatctgatcta 7531832  T
Q  490 ccctccttactacataatcaacatg 514  Q
    | ||||||||||||||||| |||||    
T  7531833 ctctccttactacataatccacatg 7531857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 361 - 460
Target Start/End: Original strand, 9904941 - 9905041
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||||| ||||||||||| || || ||||||| | |||||| |||| |||||  ||||||||||||||| ||||| ||||| ||||||||||| |||    
T  9904941 cataatgttttatcataaaccttattttgatccaaatcattaatttctaaatctttattaatagtttctcttgtagtttttctaggtcttcatctacctc 9905040  T
Q  460 t 460  Q
    |    
T  9905041 t 9905041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 356 - 443
Target Start/End: Original strand, 39967553 - 39967641
Alignment:
Q  356 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 443  Q
    |||| |||||||||||| ||||||| |||  || |||||||| ||||||| ||| ||||| |||||||||||||||||||||| |||||    
T  39967553 tacgccataatgttctaacataaactatatctcaatccaactcattaatcgctagatctttcttaatagtttctcttatagtttttcta 39967641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 415
Target Start/End: Complemental strand, 21425278 - 21425215
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    |||||| | ||||||| ||||||||||| |||| |||||||||||| |||||||||||||||||    
T  21425278 aaattatgccataatggtctatcataaatcatatttcgatccaactcattaatctctatatctt 21425215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 466
Target Start/End: Original strand, 30783100 - 30783207
Alignment:
Q  360 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaact 458  Q
    |||||||||| ||| ||||||| || |||||||||||| ||||||||||| ||| |||| ||||||||||||||| ||| | |||  ||||| |||  ||    
T  30783100 tcataatgttttattataaaccgtatttcgatccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcct 30783199  T
Q  459 ctagtgat 466  Q
    ||||||||    
T  30783200 ctagtgat 30783207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 450
Target Start/End: Original strand, 33827811 - 33827906
Alignment:
Q  356 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||||| ||||||||||||||||||| || ||||||| | |||||||| || ||  || ||||||||||||||||||||| || || ||||||    
T  33827811 tacgtcatattgttctatcataaaccatatttagatccaattcattaatctataaatattttttaatagtttctcttatagtttttatacgtcttc 33827906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 13589711 - 13589602
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttctaagtcttc 450  Q
    ||||| || |||| ||||||||   ||| |||| || ||| ||||| |||||||| || ||||| | |||||||||||||||||||| ||||||||||||    
T  13589711 aaattgcgccatattgttctatttaaaatcatattttgattcaactcattaatctttaaatcttttctaatagtttctcttatagtttttctaagtcttc 13589612  T
Q  451 atctaactct 460  Q
    ||||| ||||    
T  13589611 atctacctct 13589602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 28169624 - 28169515
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||  |||||| || |||||||||||||| ||  |||||||| ||||||||| | ||| ||| |||||||||||||||||||| || || ||||||    
T  28169624 aaattacaccataatattttatcataaaccatatttgaatccaactcattaatctcaaaatctttcctaatagtttctcttatagtttttttaggtcttc 28169525  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  28169524 ctctacctct 28169515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 31716052 - 31715995
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||| |||||||||||||| ||||||||| || ||||||||| |||||||||||    
T  31716052 aaattacgccataatgttctatcttaaaccatatttggatccaactaattaatctcta 31715995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 508
Target Start/End: Original strand, 35362700 - 35362857
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| ||||||||||||||||| |||||| |||  ||||||| |||||| || | ||| ||| ||||||||||||  |||||| ||||| ||||||    
T  35362700 aaattacgccataatgttctatcatacaccatatttcagtccaactcattaatttccaaatctttcctaatagtttctccgatagtttttctaggtcttc 35362799  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     |||  || ||| |||| || |  ||||||| || ||||| |||||| ||||| ||||    
T  35362800 ctctgcctatagggatttgactatcctccatttgatctactctccttgctacaaaatc 35362857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 508
Target Start/End: Complemental strand, 5908877 - 5908721
Alignment:
Q  353 aattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttca 451  Q
    |||||||  |||| ||||||||||||| |||| || ||||||||| |||||||  |  ||| || ||||||||||||||||||||| ||||| ||||||     
T  5908877 aattacgcaataaggttctatcataaatcatattttgatccaactcattaatccttggatcttttttaatagtttctcttatagtttttctaggtcttcc 5908778  T
Q  452 tctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    | |  ||||||||||  ||    |||||| ||| ||||| |||||||||||| ||||    
T  5908777 tatgtctctagtgatctgaccatcctccacctgatctactctccttactacaaaatc 5908721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 41444389 - 41444476
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata--tcttcttaatagtttctcttatagtt 437  Q
    |||||||||  ||||||| |||||||||||||| || |||| |||  ||||||||||| |  | ||||||||||||||||||||||||    
T  41444389 aaattacgttgtaatgttatatcataaaccatattttgatcaaacccattaatctctaaaccttttcttaatagtttctcttatagtt 41444476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 365 - 467
Target Start/End: Complemental strand, 79246 - 79143
Alignment:
Q  365 atgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagt 463  Q
    ||||||||||| |  ||||| ||| ||||| || ||||||||||| ||||| |||||||||||||||||||||  ||||||| |||| |||   ||||||    
T  79246 atgttctatcacaggccatatttctatccagctcattaatctctagatctttcttaatagtttctcttatagtgtttctaagccttcctctgcttctagt 79147  T
Q  464 gatt 467  Q
    ||||    
T  79146 gatt 79143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 2518448 - 2518531
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttata 434  Q
    |||||| | ||||||||||||||| ||| |||| ||||||| ||||||||||||| || ||||| || |||||||| |||||||    
T  2518448 aaattatgccataatgttctatcagaaatcatatttcgatcaaactgattaatctgtagatcttgctcaatagtttgtcttata 2518531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 470
Target Start/End: Original strand, 16994502 - 16994613
Alignment:
Q  360 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaact 458  Q
    |||||| ||||||| ||| | ||||  || |||||||| | ||||||||| ||| |||||||||||||||| ||||||| ||||| |||||| |||  ||    
T  16994502 tcataacgttctattatacatcatatctcaatccaactcaataatctctaaatcattcttaatagtttctcatatagtttttctaggtcttcctcttcct 16994601  T
Q  459 ctagtgattcga 470  Q
    | ||||||||||    
T  16994602 ccagtgattcga 16994613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 455
Target Start/End: Complemental strand, 23023452 - 23023353
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    |||||||||| |||||||||| | |||  | | |||||||| |||||||| || ||||| |||| ||||||||||||||||| ||||| |||||| ||||    
T  23023452 acgtcataatattctatcatatatcatgttcctatccaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctcta 23023353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 36069834 - 36069751
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttata 434  Q
    |||||||| | |||||||||||||||||||||| ||| | |||||| ||||||||||| ||  || ||||||||||| ||||||    
T  36069834 aaattacgccgtaatgttctatcataaaccatatttctacccaactcattaatctctaaatatttgttaatagtttcccttata 36069751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 348 - 415
Target Start/End: Original strand, 41971836 - 41971903
Alignment:
Q  348 aattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    ||||| |||| |||||||||||||||||||||| ||| |||  ||||||| ||||||||||| |||||    
T  41971836 aattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctt 41971903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 395
Target Start/End: Complemental strand, 42584591 - 42584548
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaa 395  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  42584591 aaattacgtcataatgttctatcataaaccatatttggatccaa 42584548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 45512558 - 45512661
Alignment:
Q  366 tgttctatcataaaccatacttcg-atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagt 463  Q
    ||||||||||||||||||| || | ||| |||| ||||||||| |  |||| | |||||||||||||||||||| ||||| |||||| |||  |||||||    
T  45512558 tgttctatcataaaccatattttggatcgaactcattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctctgcctctagt 45512657  T
Q  464 gatt 467  Q
    ||||    
T  45512658 gatt 45512661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 467
Target Start/End: Complemental strand, 4011277 - 4011199
Alignment:
Q  390 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    |||||||| |||||||| || ||||| |||||||||||||||||||||| ||||| |||||| |||  |||||| ||||    
T  4011277 atccaactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtcttcctctgtctctagcgatt 4011199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 426
Target Start/End: Complemental strand, 33076356 - 33076282
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagttt 426  Q
    ||||||| ||||||| |||||| |||||||||| || | | ||||| ||||||||||| ||||| ||||||||||    
T  33076356 aaattacatcataatattctattataaaccatattttggtacaactcattaatctctaaatctttttaatagttt 33076282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 444
Target Start/End: Original strand, 7615641 - 7615734
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaa 444  Q
    ||||||| ||||||| || |||||||||| ||| |||||||||||| |||||| | || | | ||||||||| ||||||||||| || ||||||    
T  7615641 aaattacatcataatattttatcataaactatatttcgatccaactcattaatttttaaatttttcttaatattttctcttataatttttctaa 7615734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 353 - 432
Target Start/End: Complemental strand, 16705979 - 16705898
Alignment:
Q  353 aattacgtcataatgttctatc-ataaaccatacttcgatccaactgattaatctcta-tatcttcttaatagtttctctta 432  Q
    ||||||| |||||||||| ||| ||| |||||| |||||||||||| |||||||||||   | |||||||||||||||||||    
T  16705979 aattacgccataatgttccatccatataccatatttcgatccaactcattaatctctagctttttcttaatagtttctctta 16705898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 508
Target Start/End: Complemental strand, 29700508 - 29700351
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||  |||||||||||||||||||| | | || | ||| ||| ||| ||||| |  |||| | || ||||||||||| ||||| ||||| ||||||    
T  29700508 aaattacaccataatgttctatcataaacaaaattttggtccgactcatttatctccaagtctttcctattagtttctcttttagtttttctaggtcttc 29700409  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     |||| ||||||||||  || |  |||||||||  ||||| |||||||||||| ||||    
T  29700408 ctctacctctagtgatatgactatcctccatctaatctactctccttactacagaatc 29700351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 435
Target Start/End: Complemental strand, 14459127 - 14459043
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 435  Q
    |||||||  |||||||||| ||||||||||||| || | || |||| ||||||||| | ||| ||| ||||||||||||||||||    
T  14459127 aaattacaccataatgttccatcataaaccatattttggtctaactcattaatctccaaatctttcctaatagtttctcttatag 14459043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 446
Target Start/End: Original strand, 16971843 - 16971899
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagt 446  Q
    ||||||| |||||||| |||||| |||||||| ||||||||||||||| ||||||||    
T  16971843 tccaactcattaatctttatatccttcttaatcgtttctcttatagtttttctaagt 16971899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 480
Target Start/End: Complemental strand, 23492257 - 23492138
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||| |||||||||||| | |||| ||| |||||||| ||||||| ||| ||| |||| | |||||||||| |||||| ||||| |||||| ||||  ||    
T  23492257 catagtgttctatcatatatcatatttctatccaactcattaatcgctacatctttctgagtagtttctctaatagtt-ttctaggtcttcctctatatc 23492159  T
Q  460 tagtgattcgattgccctcca 480  Q
    |||||||| || | |||||||    
T  23492158 tagtgatttgactaccctcca 23492138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 455
Target Start/End: Complemental strand, 24558715 - 24558611
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||||||||||||||||||| | ||||||   ||  |||| || ||||||||||| ||| ||||||||| |||||||||| ||| ||||  ||||||    
T  24558715 aaattacgtcataatgttctatcgttaaccatgactcagtccagctcattaatctctaaatctttcttaataatttctcttattgtttttctcggtcttc 24558616  T
Q  451 atcta 455  Q
     ||||    
T  24558615 ctcta 24558611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 35643825 - 35643869
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||    
T  35643825 acatgcccaaaccacctaagcatattttccaccatcttttctact 35643869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 452
Target Start/End: Original strand, 24739936 - 24739999
Alignment:
Q  390 atccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcat 452  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| || ||||| ||| ||||    
T  24739936 atccaactgattaatctctacatctttctcaatagtttctcttataatttttctaggtcgtcat 24739999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 25985688 - 25985601
Alignment:
Q  413 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttact 500  Q
    ||||||||||||||| | | ||||| ||||| |||||| |||| ||||||||||| || | |||| |||||| ||||  |||||||||    
T  25985688 cttcttaatagtttcccatttagtttttctaggtcttcctctacctctagtgatttgactcccctacatctgatctagtctccttact 25985601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 28269766 - 28269829
Alignment:
Q  389 gatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcat 452  Q
    ||||||||| ||||| ||||| |||||  ||||||||||||||||| || ||||| ||||||||    
T  28269766 gatccaactcattaacctctaaatcttgctaatagtttctcttataatttttctaggtcttcat 28269829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 537
Target Start/End: Complemental strand, 38668126 - 38668075
Alignment:
Q  486 tctaccctccttactacataatcaacatgcccaaaccacctaagcctatttt 537  Q
    ||||| || |||||||||||||| ||||||||| ||||||||| ||||||||    
T  38668126 tctactcttcttactacataatctacatgcccagaccacctaaacctatttt 38668075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 508
Target Start/End: Original strand, 39953376 - 39953471
Alignment:
Q  413 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||| |||||||||||||| ||||| | ||| |||| |  ||| ||||||||||  ||||  ||| |||||| ||||| |||||||||||||||||    
T  39953376 cttcctaatagtttctcttttagttttcctaggtctacccctacctctagtgatctgattcgccttcatctgatctactctccttactacataatc 39953471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 430
Target Start/End: Original strand, 45041366 - 45041444
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctct 430  Q
    |||||||| |||||||  ||||||||||||||| || ||||||||| ||||| ||||| ||| ||| |||||||||||||    
T  45041366 aaattacgccataatgcgctatcataaaccata-ttggatccaactcattaacctctaaatctttcctaatagtttctct 45041444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 512 - 554
Target Start/End: Original strand, 13171875 - 13171917
Alignment:
Q  512 atgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||| ||||||||||  |||||||||||    
T  13171875 atgcccaaaccacctaagcatattttccaccatcttttctact 13171917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 503
Target Start/End: Complemental strand, 32043760 - 32043670
Alignment:
Q  413 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactaca 503  Q
    |||||| ||||||||||| |||||| || || ||||||  ||| ||||||||||| ||   ||||||||||| ||||  ||||||||||||    
T  32043760 cttcttgatagtttctctaatagtttttttaggtcttcccctacctctagtgatttgacacccctccatctgatctattctccttactaca 32043670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 508
Target Start/End: Original strand, 45331681 - 45331775
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||||||||| ||| || |||||| ||||| || ||| |||  ||| | ||||| |||  ||||||||||| ||||| |||||||||||||||||    
T  45331681 ttcttaataggttccctaatagtttttctaggttttcctctgcctcgattgatttgatgaccctccatctgatctactctccttactacataatc 45331775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 449
Target Start/End: Complemental strand, 10109036 - 10108947
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 449  Q
    ||||||||||||||||| | ||||  || ||| ||||  |||||||||| ||||| |||| ||||||||||||| ||| ||||| |||||    
T  10109036 cataatgttctatcatataacatatctctatcaaactcgttaatctctagatctttcttattagtttctcttatggtttttctaggtctt 10108947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 35324053 - 35324000
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaatta 352  Q
    |||||||||||| |||||||||||||| | | |||| |||||| ||||||||||    
T  35324053 aacaacaaccaagccttatcccactaagtggggtcggctacgtggatcaaatta 35324000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 500
Target Start/End: Complemental strand, 37826502 - 37826374
Alignment:
Q  369 tctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattc 468  Q
    ||||||||| |||||| ||| ||||||||   ||||||||| |||||   |||||||||||||||||||  |||| |||| | |||  |||||||||||     
T  37826502 tctatcatataccatatttctatccaactcgctaatctctagatctt---aatagtttctcttatagtttatctaggtctccctctgcctctagtgattt 37826406  T
Q  469 gattgccctccatctggtctaccctccttact 500  Q
    || | | || |||||| |||||  ||||||||    
T  37826405 gactactcttcatctgatctactttccttact 37826374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 6483315 - 6483271
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||||||||||||||||| | |||||||  |||||||||||    
T  6483315 acatgcccaaaccacctaagccaagtttccaccctcttttctact 6483271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 9695689 - 9695645
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||||||||||||||||| | |||||||  |||||||||||    
T  9695689 acatgcccaaaccacctaagccgagtttccaccatcttttctact 9695645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 352 - 538
Target Start/End: Complemental strand, 8364788 - 8364602
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||||||||||||||||||||  |||  ||||||| |||||| |||| ||||| |||||||||||||||||||||| || || ||||||    
T  8364788 aaattacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaatagtttctcttatagtttttttaggtcttc 8364689  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacatgcccaaaccacctaagcctattttc 538  Q
    ||||  ||||||||||  ||    |||||||||| ||||| |||||  ||||||  || |||||||||||||||||||||||||||||    
T  8364688 atcttcctctagtgatctgacaatcctccatctgatctactctcctagctacat-ctctacatgcccaaaccacctaagcctattttc 8364602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 352 - 466
Target Start/End: Original strand, 34555 - 34670
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||||||||||||||||||||| ||| |||||||| |||||||| || ||| |||||||| ||||||||||||||| ||||| ||||||    
T  34555 aaattacgccataatgttctatcataaaccatatttcaatccaactcattaatctttagatctttcttaatggtttctcttatagtttttctaggtcttc 34654  T
Q  451 atctaactctagtgat 466  Q
     |||  ||||||||||    
T  34655 ctctgcctctagtgat 34670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 352 - 512
Target Start/End: Complemental strand, 31818763 - 31818602
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| | | | ||| |||||||||||||||||||| ||||| ||||||    
T  31818763 aaattacgacataatgttctatcataaaccatactttgatccaactcattaatctccaaacctttcctaatagtttctcttatagtttttctaggtcttc 31818664  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaaca 512  Q
      ||| || |||||||   | | |||||||| || |||||  |||||||| || ||||||||    
T  31818663 tcctacctttagtgatctcactaccctccatatgatctactttccttactgcagaatcaaca 31818602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 503
Target Start/End: Complemental strand, 24666043 - 24665891
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||| | ||||| ||  |||||||||||||||||| ||||| ||||| | ||||    
T  24666043 aaattaagtcataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagtttctcttgtagttattctatgacttc 24665944  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactaca 503  Q
     |||  |||| ||||| ||| |   || |||||| ||||| ||||||||||||    
T  24665943 ctctgcctctggtgatccgactatgcttcatctgatctactctccttactaca 24665891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 299 - 460
Target Start/End: Complemental strand, 5096114 - 5095957
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | |  ||| |||| ||||||||||||     || |||||||||||||||||||||||| || |||||||||     
T  5096114 aacaacaaccaaaccttatcccactaagtgggatcggctacatagatcaaatta-----cgccataatgttctatcataaaccatattttgatccaactc 5096020  T
Q  399 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||||| | ||| ||| ||| ||| |||||||||| ||||| ||||| |||||| |||| ||||    
T  5096019 attaaccactaaatctttcctaagagtttctcttctagtttttctaggtcttcctctacctct 5095957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 503
Target Start/End: Original strand, 9593767 - 9593908
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||||||||||||||||||||||| |  ||||||||| |||||||||||  || ||| ||||||||||||||||| || ||||| |||||| |||| |||    
T  9593767 cataatgttctatcataaaccatattgggatccaactcattaatctctaagtctttcctaatagtttctcttataatttttctaggtcttcctctacctc 9593866  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttactaca 503  Q
    |  ||||| || |  |||||||||| ||||| || |||||||||    
T  9593867 t--tgatttgactctcctccatctgatctactcttcttactaca 9593908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 481
Target Start/End: Original strand, 10617323 - 10617414
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccat 481  Q
    ||||||| ||||||||||| ||| |||||||| ||||||||||||||| ||||| || ||| |||| ||||||||||| || | ||||||||    
T  10617323 tccaactcattaatctctagatccttcttaatggtttctcttatagtttttctaggttttcttctacctctagtgatttgactcccctccat 10617414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 299 - 460
Target Start/End: Complemental strand, 12890855 - 12890698
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||| ||||||||||||||||||| || |||| ||||     
T  12890855 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccatagtgttctatcataaaccatatttggatctaactc 12890761  T
Q  399 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||| |  |||| || |||  |||| ||||||||||||||| | ||| ||||||||||| ||||    
T  12890760 attgacgtctaaatcctttctaatggtttctcttatagttttcctaggtcttcatctacctct 12890698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 508
Target Start/End: Original strand, 33997594 - 33997749
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta-tatcttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||| |||||||||| |||||  |||||| ||| |||||||| |||||||||||   | |||||||||||||||||||||||| | | | ||||||    
T  33997594 aaatgacgccataatgttcaatcatgtaccatatttctatccaactcattaatctctaggcttttcttaatagtttctcttatagttttccaaggtcttc 33997693  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     |||  |||||||| || || | |||||||||| | |||  |||||||||||| ||||    
T  33997694 ctctgcctctagtgttttgactaccctccatctagccta--ctccttactacaaaatc 33997749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 361 - 490
Target Start/End: Original strand, 35199682 - 35199811
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||||||||||||| || ||| ||| ||| |||| ||||||||||| ||||| | ||||||||||| ||||| || |||||| ||||  |||| |||    
T  35199682 cataatgttctatcatatac-atatttctatctaactcattaatctctagatctttcctaatagtttcttttataatttttctaattcttactctagctc 35199780  T
Q  460 tagtgattcgattgccctccatctggtctac 490  Q
    |||||||  || | ||||||||||| |||||    
T  35199781 tagtgatatgactaccctccatctgatctac 35199811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 7513040 - 7513079
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgat 391  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  7513040 aaattacgtcataatgttctatcataaaccatatttcgat 7513079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 1748000 - 1748081
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagtt 437  Q
    ||||| ||||||||||||||| || ||| ||| |||||||| ||||||||||| | | |||||| |||||||||| ||||||    
T  1748000 acgtcgtaatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagtttctctaatagtt 1748081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 14389211 - 14389288
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttct 428  Q
    |||||||| | ||||||| |||||||||||||| || |||| |||| ||||||||||| ||| ||||||| |||||||    
T  14389211 aaattacgccctaatgttatatcataaaccatatttggatctaacttattaatctctaaatctttcttaagagtttct 14389288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 443
Target Start/End: Original strand, 31831920 - 31832001
Alignment:
Q  364 aatgttctatcataaa-ccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 443  Q
    |||||||||||||||| ||||  || ||||||||| | ||||||||| ||||| ||||||||||||||| |||||| |||||    
T  31831920 aatgttctatcataaaaccatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 31832001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 455
Target Start/End: Original strand, 6055821 - 6055925
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||||| ||||||||||| ||| || ||| || |||| |||| ||||| ||||| ||| ||| ||||||||||||||| |||| || || ||||||    
T  6055821 aaattacgtcgtaatgttctattatacactatatttggatctaactcattaacctctaaatctttcataatagtttctcttaaagtttttataggtcttc 6055920  T
Q  451 atcta 455  Q
     ||||    
T  6055921 ctcta 6055925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 9593930 - 9593974
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||    
T  9593930 acatgcccaaaccacctaagcctattttctaccatcttttctact 9593974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 409
Target Start/End: Complemental strand, 33080368 - 33080321
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||| |||||||||||||| |||||| ||||| |||||||||||    
T  33080368 ataatgttatatcataaaccatatttcgatacaactcattaatctcta 33080321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 508
Target Start/End: Complemental strand, 579698 - 579493
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| | |||||||||||| | |  ||| |||| ||||||||||||     || |||||| |||  ||| |||||||| || ||| ||| |     
T  579698 aacaacaaccaagctttatcccactaagtgggatcggctacatagatcaaatta-----cgccataattttccttcagaaaccatattttgattcaagtc 579604  T
Q  399 attaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 497  Q
    | |||| |||||||||| ||||||||||||||||| |||| ||  | |||||  |||  ||||||||||  || |  |||||||||| || || ||||||    
T  579603 actaatttctatatctttcttaatagtttctcttacagttttttgaggtctttctctgcctctagtgatcagactatcctccatctgatcaactctcctt 579504  T
Q  498 actacataatc 508  Q
    |||| ||||||    
T  579503 actatataatc 579493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 508
Target Start/End: Original strand, 4948417 - 4948511
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||| |||||||| |||| ||||| || || |||||| |||| |||||||| || || |  | |||||||| ||||| |||||||||||||||||    
T  4948417 ttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttactacataatc 4948511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 508
Target Start/End: Original strand, 4955388 - 4955482
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||| |||||||| |||| ||||| || || |||||| |||| |||||||| || || |  | |||||||| ||||| |||||||||||||||||    
T  4955388 ttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttactacataatc 4955482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 43102 - 43183
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctctta 432  Q
    |||||||  ||||||  |||||||||||| ||| || ||||||||| |||| |||||| ||| || ||||||||||||||||    
T  43102 aaattacaccataatactctatcataaactatattttgatccaactcattactctctagatctttattaatagtttctctta 43183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 3210558 - 3210615
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||  ||||||||||||||||||  |||| ||| |||||||| |||||||||||    
T  3210558 aaattacaccataatgttctatcataactcatatttccatccaactcattaatctcta 3210615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 514
Target Start/End: Original strand, 6906916 - 6907040
Alignment:
Q  390 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 488  Q
    ||||||||  ||||| |||| ||||| ||||||||| ||| |||||| | ||| |  |||||||||| |||| |||||| || | |||| |||||| |||    
T  6906916 atccaactcgttaatatctagatctttcttaatagtctct-ttatagcttttcaagatcttcatctacctctcgtgatttgactaccctgcatctgatct 6907014  T
Q  489 accctccttactacataatcaacatg 514  Q
    || |||||||||||| |||| |||||    
T  6907015 actctccttactacaaaatctacatg 6907040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 9568931 - 9568874
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||| ||||| | |||||||||||||||| || ||||||||| | |||||||||    
T  9568931 aaattacgccataacggtctatcataaaccatatttggatccaactcaataatctcta 9568874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 466
Target Start/End: Complemental strand, 547215 - 547111
Alignment:
Q  363 taatgttctatcataaaccatacttcgatccaactgattaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatctaactcta 461  Q
    ||||||||||||||| |||||| ||   ||||||| |||||| | || || || || |||||||||||| |||||| |||| ||||||  ||| ||||||    
T  547215 taatgttctatcatacaccataatttagtccaactcattaatttttaaattttgtttaatagtttctctaatagtttttcttagtctttctctgactcta 547116  T
Q  462 gtgat 466  Q
    |||||    
T  547115 gtgat 547111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 359 - 450
Target Start/End: Original strand, 25493907 - 25493999
Alignment:
Q  359 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| |||| |||| ||||||||| ||  || ||||| |||||||| || | | ||| | |||||||||||||||||||||||| ||||||    
T  25493907 gtcatattgttttatcgtaaaccatatttaaattcaactcattaatctataaacttttcctgatagtttctcttatagttcttctaggtcttc 25493999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 352 - 508
Target Start/End: Original strand, 28627983 - 28628140
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||||||||||||||||||| | ||  |||||||| ||||||||||| ||||| | |||||||||||||||||||| ||||| ||||||    
T  28627983 aaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaatctttcctaatagtttctcttatagtttttctaggtcttc 28628082  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     |||| |||| |||||| || |  |||||||| | ||||| |||||||||||||||||    
T  28628083 ctctacctcttgtgatttgactatcctccatcggatctactctccttactacataatc 28628140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 368 - 484
Target Start/End: Original strand, 24549754 - 24549871
Alignment:
Q  368 ttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgat 466  Q
    |||||||| | |||||| ||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||  | |||||| |||| ||||||||||    
T  24549754 ttctatcaaataccatatttcaatccaactcattaatctctagatctttcttaatagtttctcttatagttctttcaggtcttcttctacctctagtgat 24549853  T
Q  467 tcgattgccctccatctg 484  Q
    | || | |||||||||||    
T  24549854 ttgaatcccctccatctg 24549871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 352 - 508
Target Start/End: Original strand, 38135263 - 38135419
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||| ||||||||||| ||||| |||| ||||||| ||||||||||| ||| || |||||||||||||||||| || ||||| ||||||    
T  38135263 aaattacgccataatattctatcataacccatatttcggtccaactcattaatctctaaatcttttttaatagtttctcttatactttttctaggtcttc 38135362  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    ||||  ||||| ||||  || |  |||||||||| ||||  |||||||||||| ||||    
T  38135363 atctgcctctaatgatctgactatcctccatctgatcta-tctccttactacaaaatc 38135419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 443
Target Start/End: Complemental strand, 1569248 - 1569156
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 443  Q
    |||||||| | |||||||||||||||||||||| || ||||||||| ||||||||||| ||| |||||||||||| ||||||||||| |||||    
T  1569248 aaattacgccgtaatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttactcttatagtttttcta 1569156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 451
Target Start/End: Original strand, 21517430 - 21517530
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||||||||||||| ||||||||| |||| || ||||||||| ||||||||||| ||  || ||||||||||||||||||||| ||||| ||||||    
T  21517430 aaattacgtcataatgttatatcataaatcatatttggatccaacttattaatctctaaatattttttaatagtttctcttatagtttttctaggtcttc 21517529  T
Q  451 a 451  Q
    |    
T  21517530 a 21517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 462
Target Start/End: Complemental strand, 45601708 - 45601597
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||  |||| |||||||||||||| |||| || ||||||||| ||||||||||| ||| |||||||| ||||||||||||||| ||||| ||||||    
T  45601708 aaattacaccatagtgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatggtttctcttatagtttttctaggtcttc 45601609  T
Q  451 atctaactctag 462  Q
     |||| ||||||    
T  45601608 ctctacctctag 45601597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 299 - 460
Target Start/End: Original strand, 40979930 - 40980087
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||| ||||||||||||||||||| || |||||||||     
T  40979930 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccatagtgttctatcataaaccatatttggatccaactc 40980024  T
Q  399 attaatctctatatcttct-taatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||| | ||||| ||||| | |||||||||||||||||||| | ||| |||||| |||| ||||    
T  40980025 attgacctctaaatcttttctaatagtttctcttatagttttcctaggtcttcctctacctct 40980087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 415
Target Start/End: Original strand, 36101779 - 36101890
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | ||| ||||| | ||||     ||||||||||||||||||||||||||||||||| || |||||||||     
T  36101779 aacaacaaccaagccttatcccactaagtggggtcaactacatggatc-----aaattacgtcataatgttctatcataaaccatattttgatccaactc 36101873  T
Q  399 attaatctctatatctt 415  Q
    |||||||| || |||||    
T  36101874 attaatctataaatctt 36101890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 538
Target Start/End: Original strand, 47796202 - 47796388
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||| ||||||||||||||||| |||  ||||||| |||||| |||| ||| ||| |||||| |||||||||| || ||||  ||||||    
T  47796202 aaattacgccataatattctatcataaaccatatttcagtccaacttattaatttctaaatctttcctaataggttctcttataatttttctcggtcttc 47796301  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacatgcccaaaccacctaagcctattttc 538  Q
    ||||  | ||||||||  ||    |||||||||| ||||| |||||  ||||||  |  |||||||||||||||||| ||||||||||    
T  47796302 atctgcccctagtgatctgacaatcctccatctgatctactctcctagctacat-ctatacatgcccaaaccacctacgcctattttc 47796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 37976458 - 37976368
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||| ||| ||| || ||||||| ||||||||| ||||| ||||||    
T  37976458 cataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcatattagtttcacttatagtttttctaggtcttc 37976368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 503
Target Start/End: Complemental strand, 47848896 - 47848754
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    |||||||||||||||||||||||| || |||||| || ||||||| | | |||||   ||||||||||||||||||| |||||  ||||| |||  ||||    
T  47848896 cataatgttctatcataaaccatatttggatccagctcattaatccccaaatctttccaatagtttctcttatagtttttctagttcttcctctgcctct 47848797  T
Q  461 agtgattcgattgccctccatctggtctaccctccttactaca 503  Q
    ||||||  || |  |||||||||| ||||| ||||||| ||||    
T  47848796 agtgatcagactatcctccatctgatctactctccttagtaca 47848754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 443
Target Start/End: Original strand, 36239846 - 36239938
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttcta 443  Q
    |||||||| ||||||||||||||||||| |||| || |||||||||  |||||||||| | | ||| |||||||||||||||||||| |||||    
T  36239846 aaattacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagtttctcttatagtttttcta 36239938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 466
Target Start/End: Original strand, 44401177 - 44401290
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||||||||||||||||||||||| |||| || |||  ||||  |||||||||| ||| ||||||||||||||||||||| || ||||| ||| ||    
T  44401177 aaattacgtcataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctcttataatttttctaggtcatc 44401274  T
Q  451 atctaactctagtgat 466  Q
     || | ||||||||||    
T  44401275 ctccacctctagtgat 44401290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 449
Target Start/End: Complemental strand, 28858269 - 28858179
Alignment:
Q  360 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 449  Q
    |||||| ||||||||||| |  ||| ||| |||||||| ||||||||||| ||||| ||||||||||| |||||||||| |||||||||||    
T  28858269 tcataacgttctatcatataaaatatttctatccaacttattaatctctagatctttcttaatagtttgtcttatagtttttctaagtctt 28858179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 403
Target Start/End: Complemental strand, 5418354 - 5418247
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaatta---aattacgtcataatgttctatcataaaccatacttcgatccaa 395  Q
    |||||||||||| |||||||||||||||| | ||||||||| | ||||||||||    || |   |||||||||||||||||||||||| |||| |||||    
T  5418354 aacaacaaccaagccttatcccactaaatggggtcgactacatggatcaaattacgccataaatccataatgttctatcataaaccatatttcggtccaa 5418255  T
Q  396 ctgattaa 403  Q
    || |||||    
T  5418254 ctcattaa 5418247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 9210754 - 9210853
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| ||||||||| |||||||||||||| || ||||||||| ||||| ||||| | | ||| ||| |||||||||||||||| | ||| ||||||    
T  9210754 aaattacgccataatgttgtatcataaaccatatttggatccaactcattaacctctaaatttttcctaaaagtttctcttatagttttcctaggtcttc 9210853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 455
Target Start/End: Complemental strand, 12966239 - 12966144
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    ||||||| | ||||||| |||||| ||| |||||| | ||||||||||| || || |||||||||||||||||||||| ||||| |||||| ||||    
T  12966239 cataatgatttatcatataccatatttctatccaaatcattaatctctaaatatttcttaatagtttctcttatagtttttctaggtcttcctcta 12966144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 28542007 - 28542069
Alignment:
Q  365 atgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagttt 426  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||| ||| |||||||||||||    
T  28542007 atgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagttt 28542069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 30814175 - 30814229
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatct 406  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||    
T  30814175 aaattacgtgataatgttctatcataaaacatatttcgatccaactaattaatct 30814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 35922485 - 35922407
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctc 429  Q
    |||||| ||||||||||||||||||||| |||| || ||| ||||| ||||| ||||| ||| ||||||||||||||||    
T  35922485 aaattaggtcataatgttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagtttctc 35922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 362 - 455
Target Start/End: Complemental strand, 36136986 - 36136892
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    ||||||||||||||||||||||| || ||||||| | |||||  |||| ||| |||  ||||||||||||||||||| ||||| |||||| ||||    
T  36136986 ataatgttctatcataaaccatatttggatccaattcattaacatctaaatctttccaaatagtttctcttatagtttttctaggtcttcctcta 36136892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 433
Target Start/End: Original strand, 40391873 - 40391955
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttat 433  Q
    |||||||| |||||||||||||||||| ||||| |||| ||||||| |||||| |||| ||| ||| || |||||||||||||    
T  40391873 aaattacgccataatgttctatcataagccatatttcggtccaacttattaatttctaaatcattcctactagtttctcttat 40391955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 34341445 - 34341502
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||| |||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  34341445 aaattacgccataatgttctatcataaaccatatttcaatccaactcattcatctcta 34341502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 2882786 - 2882838
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaat 404  Q
    |||||||| |||||||||||||||||||||||  |||||||||||| ||||||    
T  2882786 aaattacgccataatgttctatcataaaccatgtttcgatccaactcattaat 2882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 5577546 - 5577594
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  5577546 cataatgttctatcataaaccatacttggatccaactcattagtctcta 5577594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 426
Target Start/End: Original strand, 27893565 - 27893688
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| ||||||| |||||| ||| |||| |||| |  |||||||||      | ||||||||||||||||||| |||| |||| |||| ||     
T  27893565 aacaacaaccaagccttatcgcactaagtagggtcggctacatgaatcaaattat-----gccataatgttctatcataaaacatatttcggtccagctc 27893659  T
Q  399 attaatctctatatc-ttcttaatagttt 426  Q
    ||||||||||| ||| |||||||||||||    
T  27893660 attaatctctaaatctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 40169707 - 40169663
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  40169707 acatgcccaaaccacctaagcctattttccaccatcttttctact 40169663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 47848732 - 47848688
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  47848732 acatgcccaaaccacctaagcctattttccaccatcttttctact 47848688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 14593931 - 14593876
Alignment:
Q  412 tcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    |||||||||||||||||||||||||| ||||| ||||||  ||| |||||||||||    
T  14593931 tcttcttaatagtttctcttatagtttttctaggtcttcccctacctctagtgatt 14593876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 466
Target Start/End: Complemental strand, 22174223 - 22174117
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||||||||||| | |||||| ||| ||| || | ||||||||||| |||||  || |||||||||||||||||| ||||| || ||| |||  |||    
T  22174223 cataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatagtttctcttatagtttttctacgttttcctctgcctc 22174124  T
Q  460 tagtgat 466  Q
    |||||||    
T  22174123 tagtgat 22174117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 466
Target Start/End: Original strand, 26741944 - 26742061
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctctt--atagttcttctaagtct 448  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||| ||| || || | ||  ||| ||||||||| ||||  |||||| ||||| ||||    
T  26741944 aaattacgccataatgttctatcataaaccatatttcggtccaactcatttatttccaaatatttcctaatagtttatctttgatagtttttctacgtct 26742043  T
Q  449 tcatctaactctagtgat 466  Q
    || |||  ||||||||||    
T  26742044 tcctctgcctctagtgat 26742061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 552
Target Start/End: Complemental strand, 42187528 - 42187486
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttcta 552  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  42187528 acatgcccaaaccacctaagcctattttccaccatcttttcta 42187486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 14057710 - 14057625
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 436  Q
    |||||||  |||||||||||||||||||||||| ||  ||| |||  ||||| ||||| ||| ||| |||||||||||||||||||    
T  14057710 aaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctcttatagt 14057625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 14367738 - 14367653
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 436  Q
    |||||||  |||||||||||||||||||||||| ||  ||| |||  ||||| ||||| ||| ||| |||||||||||||||||||    
T  14367738 aaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctcttatagt 14367653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 362 - 500
Target Start/End: Complemental strand, 28359476 - 28359340
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactct- 460  Q
    |||||||||||||||| |||||  ||| |||||| | ||||||||||| |   |||||||| ||||||||||| || ||||| | |||  |||| ||||     
T  28359476 ataatgttctatcatataccatttttctatccaattaattaatctctaga---tcttaatattttctcttataatttttctaggactttctctacctcta 28359380  T
Q  461 agtgattcgattgccctccatctggtctaccctccttact 500  Q
    ||||||| || | ||||||||||| | ||| |||||||||    
T  28359379 agtgatttgactaccctccatctgatatactctccttact 28359340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 434
Target Start/End: Complemental strand, 42187721 - 42187590
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataa-tgttctatcataaaccatacttcgatccaact 397  Q
    ||||||||| || |||||||||||||| | | |||| |||| | ||||||||||     || ||||| ||||||||||||||||| | || |||||||||    
T  42187721 aacaacaacaaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccataaatgttctatcataaacca-atttggatccaact 42187628  T
Q  398 gattaatctctatat-cttcttaatagtttctcttata 434  Q
     ||||||||||| ||  ||| |||||||||||||||||    
T  42187627 aattaatctctaaatatttcctaatagtttctcttata 42187590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 432
Target Start/End: Complemental strand, 43282062 - 43281982
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctctta 432  Q
    |||||||| |||| |||| | |||||||||||| || ||||||||| ||||||||||| ||||| |||||| ||||||||||    
T  43282062 aaattacgccata-tgttttgtcataaaccatattttgatccaactcattaatctctagatcttacttaattgtttctctta 43281982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 443
Target Start/End: Complemental strand, 43282626 - 43282549
Alignment:
Q  367 gttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 443  Q
    ||||||| |||||||||| |||||||||||| | ||| ||| | | ||| |||||||||||||||||||||| |||||    
T  43282626 gttctataataaaccatatttcgatccaactcaataacctcaagaacttacttaatagtttctcttatagtttttcta 43282549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 435
Target Start/End: Original strand, 32368407 - 32368471
Alignment:
Q  372 atcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatag 435  Q
    |||||| |||||| |||||||||||| | ||||||||| ||||| |||||||| |||||||||||    
T  32368407 atcatataccatatttcgatccaactcactaatctctaaatcttccttaatagcttctcttatag 32368471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 387
Target Start/End: Complemental strand, 1758476 - 1758441
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatactt 387  Q
    ||||||||| ||||||||||||||||||||||||||    
T  1758476 aaattacgtaataatgttctatcataaaccatactt 1758441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Complemental strand, 16013454 - 16013399
Alignment:
Q  412 tcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    |||||||||||||||||||||||||| ||||| ||||||  ||| |||| ||||||    
T  16013454 tcttcttaatagtttctcttatagtttttctaggtcttcccctacctctggtgatt 16013399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 436
Target Start/End: Complemental strand, 30664798 - 30664715
Alignment:
Q  354 attacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 436  Q
    ||||||||| | | || |||||||||||||  |  ||||||||| ||||||||||| ||| ||||||||||||||| |||||||    
T  30664798 attacgtcaaagtattgtatcataaaccatgttatgatccaactcattaatctctagatctttcttaatagtttcttttatagt 30664715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 541
Target Start/End: Complemental strand, 35713753 - 35713722
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccac 541  Q
    ||||||||||||||||||||||||||||||||    
T  35713753 acatgcccaaaccacctaagcctattttccac 35713722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 40830393 - 40830318
Alignment:
Q  393 caactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    ||||| |||||| |||| ||| |||||||||||||||||||||| | ||||| |||||| |||  |||||||||||    
T  40830393 caactcattaatttctagatccttcttaatagtttctcttatagattttctaggtcttcctctgtctctagtgatt 40830318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 467
Target Start/End: Original strand, 42177073 - 42177184
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    |||||||||||||| |||||| |||||| ||  ||  |||| ||| ||||||| ||||| |||||||| ||||||||||| | ||||| |||||| || |    
T  42177073 acgtcataatgttcaatcatataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctacgtcttcctcca 42177172  T
Q  456 actctagtgatt 467  Q
     ||||| |||||    
T  42177173 cctctaatgatt 42177184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 460
Target Start/End: Complemental strand, 1011326 - 1011170
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| |||||||||||| |      |||||||||||||| ||||||||| || ||||||| |     
T  1011326 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacac-----cataatgttctatcctaaaccata-ttggatccaaatc 1011233  T
Q  399 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||||| || || ||  ||| ||||| ||||||| ||| || ||||| |||||| |||| ||||    
T  1011232 attaacctttaaatatttcctaataatttctctcataatttttctaggtcttcctctacctct 1011170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 395
Target Start/End: Original strand, 30997630 - 30997676
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaa 395  Q
    ||||||||| |||||||||||| ||| ||||||||| ||||||||||    
T  30997630 attaaattaggtcataatgttcaatcgtaaaccatatttcgatccaa 30997676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 415
Target Start/End: Complemental strand, 33732057 - 33732003
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    |||||||||||||||||||||||| |||||||  ||| |||||||| || |||||    
T  33732057 cataatgttctatcataaaccatatttcgatctcactcattaatctttagatctt 33732003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 450
Target Start/End: Complemental strand, 35713927 - 35713831
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||||||||||||||||| ||| |||||| ||||| | | ||||  || | ||||||||| ||||| |||||||| ||||| ||||||    
T  35713927 aaattacgccataatgttctatcataaacaatatttcgattcaactcaat-atctagat-tattcttaataatttctgttatagtttttctaggtcttc 35713831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 581
Target Start/End: Complemental strand, 38920852 - 38920785
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaacttcctc 581  Q
    ||||||||||||||| |||||||| |||||||  |||||||||    |||||| ||||||||||||| ||||    
T  38920852 acatgcccaaaccacttaagcctagtttccaccatcttttcta----ctataggtgctaccccaactccctc 38920785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 460
Target Start/End: Complemental strand, 43491588 - 43491431
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||| |||||| ||     |||| |||||||||||||| |||| || |||||||||     
T  43491588 aacaacaaccaagccttatcccactaagtggggtcggctacatggatgaaattacat-----catagtgttctatcataaatcatatttggatccaactt 43491494  T
Q  399 attaatctctata-tcttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||| | ||||| | ||||  |||| |||||||||||| || | ||| |||||| |||| ||||    
T  43491493 attgacctctaaattctttctaatggtttctcttataattttcctaggtcttcctctacctct 43491431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 389
Target Start/End: Original strand, 26332923 - 26332960
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcg 389  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  26332923 aaattacgtcataatattctatcataaaccatatttcg 26332960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 30814771 - 30814836
Alignment:
Q  402 aatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgat 466  Q
    |||||||| ||||| |||||||||||||||||||||  ||||| |||||| |||  ||||||||||    
T  30814771 aatctctagatctttcttaatagtttctcttatagtgtttctaggtcttcctctgcctctagtgat 30814836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 34926572 - 34926617
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaact 397  Q
    |||||||| ||| | |||||||||||||||||| ||||||||||||    
T  34926572 aaattacgccattaagttctatcataaaccatatttcgatccaact 34926617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 40138998 - 40139079
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctctta 432  Q
    |||| |||||||||| ||||||||||   |||| ||| ||| |||  ||||||||||| ||| |||||||||||||||||||    
T  40138998 aaatgacgtcataatattctatcatatgtcatatttctatcaaacgcattaatctctagatctttcttaatagtttctctta 40139079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 7189450 - 7189494
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||| ||||||| ||  |||||||||||    
T  7189450 acatgcccaaaccacctaagcttattttctaccatcttttctact 7189494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 362 - 460
Target Start/End: Original strand, 28562425 - 28562525
Alignment:
Q  362 ataatgttctatcataaa-ccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||||||| ||||||||| ||||| |  |||||||||  |||||||||| ||||| | ||||||||||||||||| || ||||| ||| || |||| |||    
T  28562425 ataatgttatatcataaaaccatattaggatccaactcgttaatctctaaatctttcataatagtttctcttatattttttctaggtcatcctctacctc 28562524  T
Q  460 t 460  Q
    |    
T  28562525 t 28562525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 28628157 - 28628201
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||||||||||||||||| |||||||||  || ||||||||    
T  28628157 acatgcccaaaccacctaagccaattttccaccatcatttctact 28628201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 550
Target Start/End: Original strand, 38135436 - 38135476
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttc 550  Q
    ||||| ||||||||||||||||||||||||||  |||||||    
T  38135436 acatgtccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 379
Target Start/End: Complemental strand, 44951435 - 44951360
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaa 379  Q
    |||||||||||| |||||| ||||||| || ||||| |||| | ||||     ||||||||||||| ||||||||||||||    
T  44951435 aacaacaaccaaaccttataccactaagtattgtcggctacatggatc-----aaattacgtcatagtgttctatcataaa 44951360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 384
Target Start/End: Complemental strand, 48515403 - 48515371
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccata 384  Q
    |||||||| ||||||||||||||||||||||||    
T  48515403 aaattacgccataatgttctatcataaaccata 48515371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 364 - 513
Target Start/End: Original strand, 26784402 - 26784552
Alignment:
Q  364 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctag 462  Q
    |||||| ||||||| |||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||||||| ||||| |||||  |||  ||||||    
T  26784402 aatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctttctctgcctctag 26784501  T
Q  463 tgattcgattgccctccatctggtctaccctccttactacataatcaacat 513  Q
    ||||| || | ||||||||||  |||||||||||||||||| |||| ||||    
T  26784502 tgatttgactaccctccatcttatctaccctccttactacaaaatccacat 26784552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 364 - 508
Target Start/End: Original strand, 19235046 - 19235191
Alignment:
Q  364 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctag 462  Q
    |||||||||||| | |||||| ||| |||||| | ||||||||||| ||||| || ||||||||||||||||||| ||||| |||||| |||| ||||||    
T  19235046 aatgttctatcaaataccatatttctatccaaatcattaatctctagatctttctcaatagtttctcttatagtttttctaggtcttcctctatctctag 19235145  T
Q  463 tgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    ||||| || | ||||||||||| ||||| ||| |||||||| ||||    
T  19235146 tgatttgactcccctccatctgatctactctctttactacagaatc 19235191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 455
Target Start/End: Complemental strand, 33287646 - 33287549
Alignment:
Q  359 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||| |||| ||| |||||||||||||||||||||||| ||||| |||||| ||||    
T  33287646 gtcataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaatagtttctcttatagtttttctaggtcttcctcta 33287549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 352 - 501
Target Start/End: Complemental strand, 38435184 - 38435034
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||||||| ||||||||||| | |||||||||||  ||||||||||| ||| |||||||||||||||||| ||||| ||||| |||| |    
T  38435184 aaattacgccataatgttcaatcataaaccaaatttcgatccaacacattaatctctagatctttcttaatagtttctcttgtagtttttctaggtctac 38435085  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttacta 501  Q
     |||  ||||||||||  || |  ||||||| || ||||| ||||||||||    
T  38435084 ctctgcctctagtgatctgactatcctccatatgatctactctccttacta 38435034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 490
Target Start/End: Complemental strand, 33504456 - 33504316
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgatt-aatctctatatc-ttcttaatagtttctcttatagttcttctaagtctt 449  Q
    |||||||| ||||||||||||||||| |||||| ||| |||||||| ||| |||||||| ||| |||||||||||||||||||||||| ||||| || ||    
T  33504456 aaattacgccataatgttctatcatataccatatttcaatccaacttattaaatctctagatctttcttaatagtttctcttatagtttttctaggtttt 33504357  T
Q  450 catctaactctagtgattcgattgccctccatctggtctac 490  Q
      |||  ||||||||||  || | ||||||||||| |||||    
T  33504356 tctctgcctctagtgatctgactaccctccatctgatctac 33504316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 508
Target Start/End: Original strand, 37470192 - 37470340
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||||||||||||||||  ||||| |||||||||||| ||||||||||| |||| || |||||||||||||||||||| ||  | |||||| |||| | |    
T  37470192 cataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaatagtttctcttatagttttttcaggtcttcctctaccac 37470291  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||||||  || | || |||||||  ||||| ||||||| |||||||||    
T  37470292 tagtgatctgactaccttccatctaatctactctccttaatacataatc 37470340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 19336943 - 19337020
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttct 428  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||| |||||||||    
T  19336943 aaattacgccataatgttctatcataaaccatatttcgatccaactcattaatctctaaatctttctttatagtttct 19337020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 352 - 435
Target Start/End: Complemental strand, 9496098 - 9496014
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 435  Q
    |||||||| |||||||||||||||||||||||| || ||||||||| ||||| ||||| ||| |||| |||||||||||||||||    
T  9496098 aaattacgccataatgttctatcataaaccatatttggatccaactcattaacctctaaatctttctgaatagtttctcttatag 9496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 42149710 - 42149793
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttata 434  Q
    |||||||| |||||||||||||||||||||||| ||| ||||| || | ||||||||| ||| |||||||||||||||||||||    
T  42149710 aaattacgccataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagtttctcttata 42149793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 399 - 508
Target Start/End: Original strand, 23714361 - 23714468
Alignment:
Q  399 attaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctta 498  Q
    ||||||||||| |||||  | ||| |||||||||||||| |||||||||||||||||  |||||||||| || | ||| |||| || ||||| |||||||    
T  23714361 attaatctctagatctt--tgataatttctcttatagtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctcctta 23714458  T
Q  499 ctacataatc 508  Q
    ||||||||||    
T  23714459 ctacataatc 23714468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 399 - 508
Target Start/End: Original strand, 24102033 - 24102140
Alignment:
Q  399 attaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctta 498  Q
    ||||||||||| |||||  | ||| |||||||||||||| |||||||||||||||||  |||||||||| || | ||| |||| || ||||| |||||||    
T  24102033 attaatctctagatctt--tgataatttctcttatagtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctcctta 24102130  T
Q  499 ctacataatc 508  Q
    ||||||||||    
T  24102131 ctacataatc 24102140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 390 - 514
Target Start/End: Complemental strand, 43832292 - 43832167
Alignment:
Q  390 atccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 488  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||||||  | || |||||| |||   |||| ||||| |||| | ||||||||| |||    
T  43832292 atccaactcattaatctctagatccttcttaatagtttctcttatagtttgtttaggtcttcctctgcgtctactgatttgattactctccatctgatct 43832193  T
Q  489 accctccttactacataatcaacatg 514  Q
    || ||||| ||||||||||| |||||    
T  43832192 actctcctaactacataatccacatg 43832167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 463
Target Start/End: Complemental strand, 26671050 - 26670888
Alignment:
Q  297 caaacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaac 396  Q
    ||||||| ||||||  |||||||||||||  ||||||| |||| | |||||||||| |      ||| || |||||||||||| |||| || | ||||||    
T  26671050 caaacaataaccaagtcttatcccactaagcagtgtcggctacatggatcaaattacac-----cattatattctatcataaatcatattttggtccaac 26670956  T
Q  397 tgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagt 463  Q
    | ||||||||||| ||||| ||||||||||||| |||||||| || || |||||| |||| |||||||    
T  26670955 tcattaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttcctctacctctagt 26670888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 374 - 508
Target Start/End: Complemental strand, 38860388 - 38860253
Alignment:
Q  374 cataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgatt 472  Q
    ||||||||||| | |||| ||||| || |||||||| ||||| ||||||||||||||||||  || ||| |||||||| |||  ||||||| ||| || |    
T  38860388 cataaaccatattgcgatacaactcatgaatctctagatctttcttaatagtttctcttatcatttttccaagtcttcgtctgcctctagtaatttgact 38860289  T
Q  473 gccctccatctggtctaccctccttactacataatc 508  Q
     ||||||||||  ||||| |||||| ||||||||||    
T  38860288 accctccatctcatctactctccttcctacataatc 38860253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 457
Target Start/End: Complemental strand, 13149564 - 13149458
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| |||||||||||||||||| ||| ||| || ||| | ||| ||||| ||||| ||||| | |||||||||||||||||||| | ||||||||||    
T  13149564 aaattatgtcataatgttctatcatcaacgatatttggattctactcattaacctctaaatctttcataatagtttctcttatagttttcctaagtcttc 13149465  T
Q  451 atctaac 457  Q
     ||||||    
T  13149464 ctctaac 13149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 23915743 - 23915829
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagtt 437  Q
    |||||||| |||| ||||||||||||||||||| |||  |||| || ||||||||||| | | ||||||||||||||||||||||||    
T  23915743 aaattacgccatagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagtttctcttatagtt 23915829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 501
Target Start/End: Complemental strand, 12141767 - 12141626
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||||||||||||| |||||| || ||||||| | |||||||||||  || ||| |||||||||||| ||||| | ||||| |||||| |||| |||    
T  12141767 cataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagtttctcctatagcttttctaggtcttcctctacctc 12141668  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttacta 501  Q
    | || ||| || |  |||| ||||| ||||| ||||||||||    
T  12141667 ttgtaatttgactatcctcaatctgatctactctccttacta 12141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 363 - 450
Target Start/End: Original strand, 9556430 - 9556518
Alignment:
Q  363 taatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||||||||||||||||||  | ||||||||| ||||||| ||| ||| ||||||||||||| |||||||||| ||| | ||||||    
T  9556430 taatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatagtttatcttatagtttttcaaggtcttc 9556518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 503
Target Start/End: Complemental strand, 18959143 - 18958991
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| | ||||||||||||||||| |||||| || ||||||||| ||||||||| |  || ||| | |||||||||||| ||||| ||||| ||||||    
T  18959143 aaattatgccataatgttctatcatagaccatattttgatccaactcattaatctccaagtctttccttatagtttctcttgtagtttttctaggtcttc 18959044  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactaca 503  Q
     |||  ||||  ||||  || |  |||||||||| ||||| ||||||||||||    
T  18959043 ctctgcctctgatgatctgactatcctccatctgatctactctccttactaca 18958991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 450
Target Start/End: Original strand, 37452284 - 37452375
Alignment:
Q  360 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||||||||||||||||||||| |||  ||||||| |||||||||||  || |||||||||| | |||||||| || ||||| ||||||    
T  37452284 tcataatgttctatcataaaccatatttctgtccaactcattaatctctaattctttcttaatagctcctcttataatttttctaggtcttc 37452375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 503
Target Start/End: Original strand, 37481676 - 37481819
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||||| |||||||| | |||||| ||  |||||||| ||| ||| ||| ||||| ||||||||||||||| |||||| ||||  ||||||||||| |||    
T  37481676 cataattttctatcaaataccatatttttatccaactcatttatcgctagatctttcttaatagtttctctaatagtttttcttggtcttcatctacctc 37481775  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttactaca 503  Q
     ||||||   | | ||||||||||| ||||| ||||| ||||||    
T  37481776 cagtgatctaactcccctccatctgatctactctcctaactaca 37481819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 299 - 460
Target Start/End: Original strand, 45543075 - 45543231
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||| ||| | |||||||||||| | | |||| |||| ||||||||| ||     || |||||||||||||||||||||||| || |||| ||||     
T  45543075 aacaacaagcaagcattatcccactaagtggggtcggctacatagatcaaagta-----cgccataatgttctatcataaaccatatttggatcgaactc 45543169  T
Q  399 attaatctctatatcttct-taatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||| | ||||| ||||| | |||||||||||||||||||| ||| | |||||| |||| ||||    
T  45543170 att-acctctaaatcttttctaatagtttctcttatagtttttccaggtcttcctctacctct 45543231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 33625248 - 33625325
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttct 428  Q
    ||||||| ||||||||||||||||||||||||| | |  ||||||| ||||||||||| ||  |||||||||||||||    
T  33625248 aaattacttcataatgttctatcataaaccatattactttccaactcattaatctctagatatttcttaatagtttct 33625325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 508
Target Start/End: Original strand, 43751997 - 43752154
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||  |||| |||||||||||| |||||  |||| ||||||| |||||| || | ||| ||| ||||||||||||| |||||| ||||| ||||||    
T  43751997 aaattacaacatagtgttctatcatacaccatctttcggtccaactcattaatttccaaatctttcctaatagtttctctgatagtttttctaggtcttc 43752096  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     | |  ||| ||||||  || |  |||||||||| ||||| |||| ||||||||||||    
T  43752097 ctatgcctccagtgatctgagtatcctccatctgatctactctccctactacataatc 43752154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 507
Target Start/End: Complemental strand, 26850466 - 26850311
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| ||||||||| |||||||||||||| |||| ||||||| || ||| |||| || | ||||||||  ||||||||||| | ||||| || ||     
T  26850466 aaattacgccataatgttttatcataaaccatatttcg-tccaactcataaatttctaaatatatcttaataacttctcttatagattttctaggttttt 26850368  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataat 507  Q
     |||  || |||||||| || |  |||||||||| ||||  ||||||||||||||||    
T  26850367 ctctgcctttagtgatttgactatcctccatctgatctagtctccttactacataat 26850311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 443
Target Start/End: Original strand, 35755247 - 35755391
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaac-- 396  Q
    |||||||||||| |||||||||||||| ||| |||| || | | ||||||||||     || || ||||||||||||||||||||| || ||||||||      
T  35755247 aacaacaaccaagccttatcccactaagtagggtcggctgcatggatcaaatta-----cggcacaatgttctatcataaaccatatttggatccaaccc 35755341  T
Q  397 --tgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 443  Q
      | ||||| ||||| ||| ||| ||||||||||| |||||||| |||||    
T  35755342 attaattaacctctaaatctttcctaatagtttctgttatagtttttcta 35755391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 415
Target Start/End: Complemental strand, 6219197 - 6219134
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    |||||||  |||||||||||||||||||||||| |||| ||||||| | ||||||||| |||||    
T  6219197 aaattacaccataatgttctatcataaaccatatttcggtccaactcactaatctctaaatctt 6219134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 437
Target Start/End: Complemental strand, 12734980 - 12734846
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | ||||||||| | ||||     |||||||  |||| ||||||||||||||||||| || |||||||||     
T  12734980 aacaacaaccaagccttatcccactaagtggggtcgactacatggatc-----aaattacaccatagtgttctatcataaaccatatttggatccaactc 12734886  T
Q  399 attaatctctatat-cttcttaatagtttctcttatagtt 437  Q
    ||| | ||||| || |||  |||| |||||||| ||||||    
T  12734885 attgacctctaaatcctttctaatggtttctctaatagtt 12734846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 7134853 - 7134939
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 437  Q
    ||||||||| |||||| |||||||||||  |||||||||||||||  |||||| | || ||| |||||| || ||||||||||||||    
T  7134853 aaattacgttataatggtctatcataaattatacttcgatccaacccattaatttttagatctttcttagtactttctcttatagtt 7134939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 508
Target Start/End: Complemental strand, 42543428 - 42543310
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| ||| ||||||| ||| ||| |||||||||||||||||||| ||||| |||| |  ||| ||||||||||  || | |||||||| || ||||    
T  42543428 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatttgatcta 42543329  T
Q  490 ccctccttactacataatc 508  Q
    | ||||| |||||| ||||    
T  42543328 ctctcctaactacagaatc 42543310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 508
Target Start/End: Original strand, 44437723 - 44437928
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| |      |||||||  ||| |||| |||||||||| |||||||  ||   |||||||     
T  44437723 aacaacaaccaagccttatcccactaagtggggtcggctacatg-----aattaaacaacgccatagtgttctatcaaaaaccatgtttttctccaactc 44437817  T
Q  399 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 497  Q
    ||| ||||||| ||| |||||||||||||||| ||||||| ||||| |||| |  ||| ||||||||||  || | ||||||||||  ||||  ||||||    
T  44437818 atttatctctagatccttcttaatagtttctcatatagtttttctaggtctacccctacctctagtgatctgactcccctccatctcatctatactcctt 44437917  T
Q  498 actacataatc 508  Q
    | |||| ||||    
T  44437918 attacagaatc 44437928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 431
Target Start/End: Original strand, 8197543 - 8197671
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| | |||||||||||| ||| |||| |||| | |||||||  |     || |||||| |||||||||| | |||| ||| ||||||||     
T  8197543 aacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacga-----cgccataatattctatcatatatcatatttctatccaactc 8197637  T
Q  399 attaatctctatatctt-cttaatagtttctctt 431  Q
    |||||||| || ||||| ||||||||||||||||    
T  8197638 attaatctttagatctttcttaatagtttctctt 8197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 431
Target Start/End: Original strand, 8202303 - 8202431
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| | |||||||||||| ||| |||| |||| | |||||||  |     || |||||| |||||||||| | |||| ||| ||||||||     
T  8202303 aacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacga-----cgccataatattctatcatatatcatatttctatccaactc 8202397  T
Q  399 attaatctctatatctt-cttaatagtttctctt 431  Q
    |||||||| || ||||| ||||||||||||||||    
T  8202398 attaatctttagatctttcttaatagtttctctt 8202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 443
Target Start/End: Complemental strand, 21834779 - 21834694
Alignment:
Q  359 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttcta 443  Q
    |||||| ||||||||||||||||| | || ||||||||| |||||||| || ||  ||| ||||||||| |||||||||| |||||    
T  21834779 gtcatattgttctatcataaaccaaatttagatccaactcattaatctataaatatttcctaatagtttatcttatagtttttcta 21834694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 31959753 - 31959644
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| | |||| ||||||||||||||||||| || ||||||||| ||| | ||||| || |||  |||| ||||||||||||||| | ||| ||||||    
T  31959753 aaattatgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttc 31959654  T
Q  451 atctaactct 460  Q
      ||||||||    
T  31959653 gcctaactct 31959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 6219025 - 6218981
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||    
T  6219025 acatgtccaaaccacctaagcctattatccactatcttttctact 6218981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 435
Target Start/End: Original strand, 12882095 - 12882179
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatag 435  Q
    |||||||| || |||||||||||| |||||||| || ||||||||| ||||| ||||| ||  ||| || |||||||||||||||    
T  12882095 aaattacgccaaaatgttctatcacaaaccatatttggatccaactcattaacctctaaatatttcctagtagtttctcttatag 12882179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 2377275 - 2377204
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctctta 432  Q
    |||||||||||||||| |||||| || ||||||||| |||| |||||| ||| || |||||||||| |||||    
T  2377275 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 2377204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 410
Target Start/End: Original strand, 13474216 - 13474322
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    ||||||||||||  ||||||||||||| | | |||||||   ||||||||||||      | ||||||||  |||||||||||||| | ||||||||||     
T  13474216 aacaacaaccaagtcttatcccactaagtggagtcgactcaatagatcaaattat-----gccataatgtattatcataaaccatattccgatccaactc 13474310  T
Q  399 attaatctctat 410  Q
    ||||||||||||    
T  13474311 attaatctctat 13474322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 576
Target Start/End: Complemental strand, 18958959 - 18958903
Alignment:
Q  516 ccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 576  Q
    ||||||||||||||||||||||||||  |||||||||    |||||| |||||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttcta----ctataggtgctaccccaact 18958903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 415
Target Start/End: Complemental strand, 36650674 - 36650611
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    ||||||||| ||| ||||||||||||||| ||| || |||| |||| ||||||||||| |||||    
T  36650674 aaattacgttatagtgttctatcataaactatattttgatctaactcattaatctctagatctt 36650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 508
Target Start/End: Complemental strand, 42092711 - 42092592
Alignment:
Q  390 atccaactgattaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 488  Q
    |||||||| ||||||||||| ||||| || ||||||||||| ||||||| ||||| |||| | | |  || |||||| | || | ||||||||||  |||    
T  42092711 atccaactaattaatctctacatcttttttaatagtttctcctatagtttttctaggtctacctgtctctatagtgaattgactaccctccatctaatct 42092612  T
Q  489 accctccttactacataatc 508  Q
    || |||||||||||| ||||    
T  42092611 actctccttactacaaaatc 42092592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 576
Target Start/End: Complemental strand, 12141599 - 12141540
Alignment:
Q  513 tgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 576  Q
    |||||||||||||||||||| ||||||||  |||||||||    |||||| |||||||||||||    
T  12141599 tgcccaaaccacctaagcctcttttccaccatcttttcta----ctataggtgctaccccaact 12141540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 552
Target Start/End: Original strand, 13240969 - 13241011
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttcta 552  Q
    |||||||||||||||||||||||| |||||||  |||||||||    
T  13240969 acatgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 19024372 - 19024318
Alignment:
Q  390 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 443  Q
    |||||||| |||||||| || ||||| |||||||||||||||||| |||||||||    
T  19024372 atccaactcattaatctttagatctttcttaatagtttctcttatggttcttcta 19024318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 426
Target Start/End: Complemental strand, 31254511 - 31254445
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagttt 426  Q
    ||||||||||| ||||||| |||| ||| || ||||| ||||||||||| ||| |||||||||||||    
T  31254511 cataatgttctgtcataaatcatatttctattcaactcattaatctctagatctttcttaatagttt 31254445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 415
Target Start/End: Complemental strand, 32402723 - 32402669
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    ||||||||||||||||| ||| || ||| |||||||| ||||||||||| |||||    
T  32402723 cataatgttctatcatataccttatttctatccaactcattaatctctagatctt 32402669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 512 - 554
Target Start/End: Complemental strand, 38860229 - 38860187
Alignment:
Q  512 atgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||| ||||||||||||||||||||||||  |||||||||||    
T  38860229 atgcctaaaccacctaagcctattttccacaatcttttctact 38860187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 426
Target Start/End: Complemental strand, 45077961 - 45077884
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaa--ctgattaatctctatatc-ttcttaatagttt 426  Q
    |||||| | ||| |||||||||||||||| ||| ||||||||||  || ||||||||||| ||| |||||||||||||    
T  45077961 aaattatgccattatgttctatcataaactatatttcgatccaactctcattaatctctaaatctttcttaatagttt 45077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 436
Target Start/End: Complemental strand, 1626415 - 1626342
Alignment:
Q  364 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagt 436  Q
    |||||||||| ||| | |||| ||  || ||||| ||||||||||| ||||| |||||||||||||||||||||    
T  1626415 aatgttctattatatatcatatttttatacaactcattaatctctagatctttcttaatagtttctcttatagt 1626342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 3720465 - 3720510
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaact 397  Q
    |||||||  |||||||||||||||||||||||  ||||||||||||    
T  3720465 aaattacaccataatgttctatcataaaccatttttcgatccaact 3720510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 495
Target Start/End: Original strand, 5759084 - 5759189
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| ||| ||||||| ||| |||||  |||||||||| |||||| ||||| || ||   ||| ||||||||||| |||| ||||||||||| ||||    
T  5759084 tccaactcattgatctctagatccttcttggtagtttctctaatagtttttctaggtatttccctacctctagtgatttgattcccctccatctgatcta 5759183  T
Q  490 ccctcc 495  Q
    | ||||    
T  5759184 ctctcc 5759189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 432
Target Start/End: Complemental strand, 12443188 - 12443135
Alignment:
Q  380 ccatacttcgatccaactgattaatctctatatct-tcttaatagtttctctta 432  Q
    ||||| |||||||||||| ||||||||||| || | ||||||||||||||||||    
T  12443188 ccatatttcgatccaactcattaatctctaaatatatcttaatagtttctctta 12443135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 18188972 - 18188887
Alignment:
Q  364 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtct 448  Q
    |||||||||| ||  | |||| ||| ||||| || ||||||||||| ||||| || |||||||||||||||| || ||||||||||    
T  18188972 aatgttctattatgtatcatatttctatccagctcattaatctctagatctttctgaatagtttctcttataatttttctaagtct 18188887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 18424427 - 18424536
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| |||||||| ||||||||||||||||||| |  |||| |||| ||| ||||||| || |||  |||| |||||||| |||||| | ||| ||||||    
T  18424427 aaatgacgtcatagtgttctatcataaaccatattcggatcaaacttattgatctctaaatcctttataatggtttctctaatagttttcctatgtcttc 18424526  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  18424527 ctctacctct 18424536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 440
Target Start/End: Original strand, 9578768 - 9578852
Alignment:
Q  356 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttctt 440  Q
    |||| |||||| |||||| |||||||||| |  ||||||||| |||||| | || || ||  |||||||||||||||||| ||||    
T  9578768 tacgccataatattctataataaaccatattaggatccaactcattaatttgtaaatttttctaatagtttctcttataggtctt 9578852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 585
Target Start/End: Complemental strand, 11412777 - 11412708
Alignment:
Q  512 atgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaacttcctctcta 585  Q
    |||||||||| |||||||||||||||||||  | |||||||    |||||| |||||||||||||  |||||||    
T  11412777 atgcccaaacaacctaagcctattttccaccatattttcta----ctataggtgctaccccaactctctctcta 11412708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 508
Target Start/End: Original strand, 12026084 - 12026212
Alignment:
Q  381 catacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctcc 479  Q
    |||| ||| ||| |||| ||||||||||| ||||| |||||||||||||| |||||||  |||| ||||| |||   ||| ||||||  || | ||| ||    
T  12026084 catatttctatcaaactcattaatctctagatctttcttaatagtttctcctatagtttctctaggtcttaatccgcctccagtgatgtgactacccacc 12026183  T
Q  480 atctggtctaccctccttactacataatc 508  Q
    ||||| ||||| ||||||| |||| ||||    
T  12026184 atctgatctactctccttagtacaaaatc 12026212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 28960213 - 28960253
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactac 339  Q
    |||||||||||| |||||||||||||||| | |||||||||    
T  28960213 aacaacaaccaagccttatcccactaaatggagtcgactac 28960253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 36366868 - 36366816
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaat 404  Q
    |||||||  ||||||||||||| |||||||||| |||| ||||||| ||||||    
T  36366868 aaattacaccataatgttctattataaaccatatttcggtccaactcattaat 36366816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 41545642 - 41545546
Alignment:
Q  347 aaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttct 442  Q
    |||| |||||| |||||| ||||||||||||||||||| ||  || ||||| ||  | ||||| ||||| | |||| ||||||||||||||| ||||    
T  41545642 aaatcaaattaagtcatagtgttctatcataaaccatatttgaattcaactcatggacctctacatcttttataatggtttctcttatagtttttct 41545546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 501
Target Start/End: Original strand, 3818915 - 3819056
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||||||||| ||||||||||||| ||| || ||||| ||||||||||| ||||| |||||||||||||||||||||| ||| | |||||| |||  |||    
T  3818915 cataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaatagtttctcttatagtttttcaaggtcttcctctttctc 3819014  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttacta 501  Q
    ||||| || |||| ||||||||||| ||||| ||| ||||||    
T  3819015 tagtggtttgattaccctccatctgatctactctctttacta 3819056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 361 - 502
Target Start/End: Complemental strand, 50806890 - 50806750
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    |||| |||| |||||||||||||| ||  |||||||  ||||||||||||  |||||| |||||||||||||| ||| ||||| |||||||||||  |||    
T  50806890 catagtgttttatcataaaccatatttttatccaacgcattaatctctatc-cttcttgatagtttctcttattgtttttctaggtcttcatctacttct 50806792  T
Q  461 agtgattcgattgccctccatctggtctaccctccttactac 502  Q
    ||||||| || | |||||||| || |||||||||||||||||    
T  50806791 agtgatttgactcccctccatttgatctaccctccttactac 50806750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 508
Target Start/End: Complemental strand, 40416594 - 40416446
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| || ||| ||||||||||||| |||||||||| ||||| |||||| |||  ||     
T  40416594 cataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatagtttgtcttatagtttttctaggtcttcttctgtctt 40416495  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    | |||||  || |  ||| |||||| ||||| |||||||||||| ||||    
T  40416494 tggtgatctgactatcctgcatctgatctactctccttactacaaaatc 40416446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 299 - 455
Target Start/End: Complemental strand, 41560509 - 41560357
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||||||||||||||||| ||||| || |||||||||     
T  41560509 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccataatgttctatcataacccatatttggatccaactc 41560415  T
Q  399 attaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    ||||||||||| || | || |||||||||||||||||| | ||||| |||||| ||||    
T  41560414 attaatctctaaatgtatcctaatagtttctcttatagcttttctaggtcttcttcta 41560357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 299 - 466
Target Start/End: Complemental strand, 8796489 - 8796326
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | |||     ||||||||| |||||||||||||||||||||||| ||| |||||| |     
T  8796489 aacaacaaccaagccttatcccactaagtggggtcggctacatggat-----taaattacgccataatgttctatcataaaccatatttcaatccaagtc 8796395  T
Q  399 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgat 466  Q
    |||||| |||| ||| ||||||||||||||||||| |||| || |  |||||| |||  ||||||||||    
T  8796394 attaatatctagatctttcttaatagtttctcttaaagtttttattggtcttcctctgcctctagtgat 8796326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 363 - 508
Target Start/End: Complemental strand, 42501329 - 42501183
Alignment:
Q  363 taatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactcta 461  Q
    |||||||||||||||  ||||| ||| |||||||| |||||||| || ||||| ||||||| |||||||||||||| ||||| || ||| |||| |||||    
T  42501329 taatgttctatcatattccatatttctatccaactcattaatctatagatctttcttaataatttctcttatagtttttctaggttttcctctacctcta 42501230  T
Q  462 gtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     ||||| || | |||||||||||  |||| |||||| ||||| ||||    
T  42501229 atgatttgactaccctccatctgaactactctcctttctacagaatc 42501183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 352 - 498
Target Start/End: Complemental strand, 6025837 - 6025690
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaa-tagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||| ||| ||||||||||| | |||||| ||| |||||||| ||||||||||| ||||| || | |||| |||||||||||| ||||| ||||||    
T  6025837 aaatgacgccatcatgttctatcagataccatatttctatccaactcattaatctctagatcttttttactagtatctcttatagtttttctaggtcttc 6025738  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctcctta 498  Q
     |||  ||||||||||| || | |||| |||||| ||||| |||||||    
T  6025737 ctctgcctctagtgatttgactaccctacatctgatctactctcctta 6025690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 467
Target Start/End: Original strand, 8342936 - 8343047
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    |||||||||||||| |||| | || ||| ||| |||||||| ||||||||||| |||||  ||||| ||||||||||||||| ||||| |||||| ||||    
T  8342936 acgtcataatgttccatcaaatactatatttctatccaactcattaatctctagatctttattaattgtttctcttatagtttttctaggtcttcctcta 8343035  T
Q  456 actctagtgatt 467  Q
     |||||||||||    
T  8343036 tctctagtgatt 8343047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 508
Target Start/End: Original strand, 50771645 - 50771763
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| |||||||||||  || |||||||||||||| ||||||||| ||||| ||||||  ||| ||||||| ||| || | ||||||||||| ||||    
T  50771645 tccaacttattaatctctaggtccttcttaatagtttcgcttatagtttttctaggtcttcccctacctctagtcatttgactcccctccatctgatcta 50771744  T
Q  490 ccctccttactacataatc 508  Q
    | |||||||||||| ||||    
T  50771745 ctctccttactacaaaatc 50771763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 299 - 460
Target Start/End: Original strand, 52561591 - 52561748
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | |||||||||      || |||||||||||| |  |||||||| || |||||||||     
T  52561591 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattt-----cgccataatgttctacccgaaaccatatttggatccaactc 52561685  T
Q  399 attaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||||| ||||| ||||| | ||| |||||||||||||||| |||||||||||| |||| ||||    
T  52561686 attaacctctaaatctttcctaacagtttctcttatagtttttctaagtcttcctctacctct 52561748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 460
Target Start/End: Complemental strand, 478920 - 478801
Alignment:
Q  341 tagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttct 439  Q
    |||||||||| |||||| |||||| | ||||||||||| ||||||||| |||||||| ||||| ||||| | ||| | |||||||||||||||||| | |    
T  478920 tagatcaaatcaaattatgtcatagtattctatcataa-ccatacttccatccaactcattaacctctaaaactttcctaatagtttctcttatagattt 478822  T
Q  440 tctaagtcttcatctaactct 460  Q
    | || |||||| |||||||||    
T  478821 tgtaggtcttcctctaactct 478801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 466
Target Start/End: Original strand, 29577192 - 29577307
Alignment:
Q  351 taaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 449  Q
    ||||||| | |||||||||||||||||| ||||| || |||||| || ||||||||||| ||||| ||||||||||| | || ||||| ||||| |||||    
T  29577192 taaattatgccataatgttctatcataa-ccatattttgatccagctcattaatctctagatctttcttaatagtttatgttgtagtttttctaggtctt 29577290  T
Q  450 catctaactctagtgat 466  Q
    | |||| ||||||||||    
T  29577291 cctctacctctagtgat 29577307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 496
Target Start/End: Complemental strand, 38869105 - 38868969
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||||||||||||| ||||||  || |||||||  ||||||| ||| ||||| ||||||| |||||||||||||| ||||| |||||| |||  |||    
T  38869105 cataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaataatttctcttatagtttttctaggtcttcttctgcctc 38869006  T
Q  460 tagtgattcgattgccctccatctggtctaccctcct 496  Q
    || ||||| || | ||||||||||  ||||| |||||    
T  38869005 taatgatttgactaccctccatctaatctactctcct 38868969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 356 - 450
Target Start/End: Original strand, 11941634 - 11941729
Alignment:
Q  356 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||||||||| |||||||||||||||| |||||||||| | ||||||||| ||||| | |||||| ||||||||| ||| ||||| ||||||    
T  11941634 tacgccataatgttttatcataaaccatactccgatccaactcaataatctctaaatcttttctaatagcttctcttattgtttttctaggtcttc 11941729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 443
Target Start/End: Complemental strand, 29129006 - 29128923
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 443  Q
    |||||||||||||||||||||||| || |||||||||  |||| ||||| ||| ||| |||||||||||||||||||| |||||    
T  29129006 cataatgttctatcataaaccatatttggatccaacttgttaacctctaaatctttcctaatagtttctcttatagtttttcta 29128923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 27520257 - 27520343
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagtt 437  Q
    ||||||| |||||||||||||||||||| |||| || |||||| || ||||||||||| || || | ||||||||||||||||||||    
T  27520257 aaattacatcataatgttctatcataaatcatatttggatccagctcattaatctctaaattttttctaatagtttctcttatagtt 27520343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 501
Target Start/End: Original strand, 32404576 - 32404726
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| ||| ||||| |||||||||||||  || |||  |||| ||||||||||| ||||| | |||||||||||||||||||| || || ||||||    
T  32404576 aaattacgccattatgttatatcataaaccatgtttggatttaactcattaatctctaaatctttcctaatagtttctcttatagtttttgtaggtcttc 32404675  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttacta 501  Q
     |||| |||| |||||  || |  |||||||||  ||||| ||||||||||    
T  32404676 ctctacctcttgtgatatgactatcctccatcttctctactctccttacta 32404726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 43375648 - 43375722
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtt 425  Q
    |||||| |||||||||||||||||| ||||||| |||| ||||||| ||||||||||| ||| ||||||||||||    
T  43375648 aaattatgtcataatgttctatcatgaaccatatttcggtccaactcattaatctctaaatctttcttaatagtt 43375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 433
Target Start/End: Original strand, 52532666 - 52532748
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttat 433  Q
    |||||||| |||||||||||||||||||||||| || | ||||||| |||||| |||| ||| ||| ||||||||||||||||    
T  52532666 aaattacgccataatgttctatcataaaccatattttgttccaactcattaatttctaaatctttcctaatagtttctcttat 52532748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 443
Target Start/End: Original strand, 7762482 - 7762579
Alignment:
Q  347 aaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttcta 443  Q
    |||| |||||||  ||||||||||||| |||||||||| || ||||||||| |||||  |||| ||||| | |||||||||||||||||||| |||||    
T  7762482 aaatcaaattacaccataatgttctattataaaccatatttagatccaactcattaacatctaaatcttttctaatagtttctcttatagtttttcta 7762579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 433
Target Start/End: Complemental strand, 51812744 - 51812659
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttat 433  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||| |||| |||||  |||| ||| ||||||| ||||||||||||    
T  51812744 attaaattacggcataatattctatcataaaccatatttcgatctaactcattaacatctagatctttcttaaaagtttctcttat 51812659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 990518 - 990594
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagtt 437  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||||| |||| ||| |||||||||||| ||||||    
T  990518 ataatgttctatcataaaccatatgttgatccaactcattaatctctagatctatctcaatagtttctctaatagtt 990594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 501
Target Start/End: Complemental strand, 2544825 - 2544681
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttca 451  Q
    |||||| | ||||||||||||| |||||||||| |||| ||||||| ||| || || | |||||    ||||||||||| |||||| ||||| ||||||     
T  2544825 aaattatgccataatgttctattataaaccatatttcgctccaactcattgatttccaaatctt----atagtttctctgatagtttttctaggtcttcc 2544730  T
Q  452 tctaactctagtgattcgattgccctccatctggtctaccctccttacta 501  Q
    |||| |||||||| || || |  |||||||||| ||||| ||||||||||    
T  2544729 tctacctctagtg-tttgactatcctccatctgatctactctccttacta 2544681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 508
Target Start/End: Complemental strand, 43423926 - 43423794
Alignment:
Q  377 aaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgcc 475  Q
    |||||||| ||| |||||||| | ||||||||| ||||| |||||| || |||||| || || ||||| |||||| |||| ||||||||||| || | |     
T  43423926 aaaccatatttctatccaactcactaatctctagatctttcttaatggtctctcttgtaatttttctaggtcttcctctacctctagtgatttgactact 43423827  T
Q  476 ctccatctggtctaccctccttactacataatc 508  Q
     ||||||| |||||| || ||||||||||||||    
T  43423826 atccatctagtctactctacttactacataatc 43423794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 410
Target Start/End: Complemental strand, 34444636 - 34444530
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| |||||||||||| |      ||||||||| ||| |||||||||| || |||||||||     
T  34444636 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacac-----cataatgttttattataaaccatatttggatccaactc 34444542  T
Q  399 attaatctctat 410  Q
    ||||||||||||    
T  34444541 attaatctctat 34444530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 362 - 508
Target Start/End: Original strand, 10569131 - 10569274
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    |||||||||||||||| || ||| ||| ||||| || ||||||||||| ||| ||||||||||||||| ||||  || ||    || ||| |||  ||||    
T  10569131 ataatgttctatcatatacgatatttctatccagcttattaatctctagatctttcttaatagtttcttttatttttttt----gtgttcctctgcctct 10569226  T
Q  461 agtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    ||||||| |||| ||||||||||  |||||||||| ||||||| ||||    
T  10569227 agtgatttgattaccctccatctaatctaccctccgtactacagaatc 10569274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 16142030 - 16142116
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagtt 437  Q
    ||||||||||||| ||||| ||||||||||||| || |||| |||| ||||| ||||| ||||| | |||| |||||||||||||||    
T  16142030 aaattacgtcatattgttcgatcataaaccataattggatctaacttattaaactctaaatcttttctaatggtttctcttatagtt 16142116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 359 - 508
Target Start/End: Original strand, 33560915 - 33561065
Alignment:
Q  359 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaac 457  Q
    ||||||||||||| | ||| |||||| ||  ||||||||   ||||||||| ||||| |||||||||||| |||| |||| ||||| | |||| |||  |    
T  33560915 gtcataatgttctctgatataccatatttatatccaactcgctaatctctagatcttacttaatagtttcccttacagtttttctaggacttcctctgcc 33561014  T
Q  458 tctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||||||||| || | |||||||||   ||||| |||||||||||| ||||    
T  33561015 tctagtgatttgactaccctccatcatatctactctccttactacagaatc 33561065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 294 - 576
Target Start/End: Original strand, 37462873 - 37463159
Alignment:
Q  294 aaacaaacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatcc 393  Q
    ||||||||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || ||||||||||||| |||||||||| || ||||     
T  37462873 aaacaaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccataatgttctatgataaaccatattt-gatca 37462966  T
Q  394 aactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagt-gattcgattgccctccatctggtctacc 491  Q
    |||| ||||| ||||| ||| ||| | || ||||||||||||||| ||||| ||  || |||| ||||  | ||| ||| |  |||||||||| |||||     
T  37462967 aactcattaacctctaaatcattcctgatcgtttctcttatagtttttctaggtaatcctctacctctttttgatccgactctcctccatctgatctact 37463066  T
Q  492 ctccttactacataatcaacatg------------cccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 576  Q
    || | ||||||   ||| |||||            |||||||||||||||||||||||| |||||||||||||    |||||| |||||||||||||    
T  37463067 cttcgtactacggcatctacatgtctactctatagcccaaaccacctaagcctattttctactgtcttttcta----ctataggtgctaccccaact 37463159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 6084207 - 6084150
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||| |||| ||||||||||||||||||| || ||||||||| |||||||||||    
T  6084207 aaattacgccatattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 9599444 - 9599553
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| ||||| ||||||||||||||||||  | |||| |||| ||||| ||||| ||  ||| |||||||||||||| ||||| ||||| ||||||    
T  9599444 aaattacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagtttctcttgtagtttttctaggtcttc 9599543  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  9599544 ctctacctct 9599553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 15577640 - 15577535
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    |||||||||||||| | | ||||  || |||||||| |||||||||||||| |||||||||||||||||||||  || || ||  ||||| |||| ||||    
T  15577640 ataatgttctatcaaatatcatatctctatccaactcattaatctctatatccttcttaatagtttctcttattatttttttagatcttcctctacctct 15577541  T
Q  461 agtgat 466  Q
    ||||||    
T  15577540 agtgat 15577535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 39318361 - 39318252
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||| ||||||||||||||||||| || ||||||||| ||| | ||||| || |||  |||| ||||||||||||||| | ||| ||||||    
T  39318361 aaattacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttc 39318262  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  39318261 ctctacctct 39318252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 13827635 - 13827687
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    ||||||||||||||||||||| |||||| ||| |||||||| |||||||||||    
T  13827635 acgtcataatgttctatcatataccatatttctatccaactcattaatctcta 13827687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 508
Target Start/End: Complemental strand, 43898400 - 43898304
Alignment:
Q  412 tcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||||| ||||||||||||||||||| ||| | |||||   ||| || | |||||| || | ||||||||||| ||||| |||||||||||||||||    
T  43898400 tcttctaaatagtttctcttatagtttttccaggtctttccctacctttggtgatttgactcccctccatctgatctactctccttactacataatc 43898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 48431630 - 48431674
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  48431630 acatgcccaaaccacctaagcctattttccaccatcttttctact 48431674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 415
Target Start/End: Complemental strand, 5338945 - 5338882
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    |||||||| ||||||||||||| ||||| || | |||||||||||| ||||||||||| |||||    
T  5338945 aaattacgccataatgttctataataaatcacatttcgatccaactcattaatctctagatctt 5338882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 361 - 455
Target Start/End: Original strand, 8203193 - 8203288
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatcta 455  Q
    |||||||||||||| |  | ||||| ||  ||||||| ||||||||||| ||||| || ||||||||||||||||||| ||||| |||||| ||||    
T  8203193 cataatgttctatcttctatcatacctccgtccaactcattaatctctagatcttttttaatagtttctcttatagtttttctaggtcttcttcta 8203288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 466
Target Start/End: Original strand, 36339854 - 36339968
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||| |||||||||| |||||| ||||||  |||  ||||||| |||||| || | ||||| | ||||||||||||| |||||| ||||| ||||||    
T  36339854 aaattacttcataatgttttatcattaaccatgtttctgtccaactcattaatttcaa-atctttcctaatagtttctctgatagtttttctaggtcttc 36339952  T
Q  451 atctaactctagtgat 466  Q
     |||| ||||||||||    
T  36339953 ctctacctctagtgat 36339968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 39776945 - 39777000
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctc 407  Q
    |||||||| |||  ||||||||||||||||||| |||||||||||| |||||||||    
T  39776945 aaattacgccattgtgttctatcataaaccatatttcgatccaactcattaatctc 39777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 508
Target Start/End: Original strand, 12261802 - 12261920
Alignment:
Q  391 tccaactgattaatctcta-tatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| ||||||| ||| | |||||||| ||||||||||||||||| ||||| |||||   | | ||||||||||| || |  |||||||| | ||||    
T  12261802 tccaactaattaatccctaatttcttcttactagtttctcttatagtttttctaggtcttaccccacctctagtgatttgactctcctccatcagatcta 12261901  T
Q  490 ccctccttactacataatc 508  Q
    ||||| |||||||| ||||    
T  12261902 ccctcattactacaaaatc 12261920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 552
Target Start/End: Original strand, 14226053 - 14226095
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttcta 552  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  14226053 acatgcccaaaccacctaagcctattttccaccatcttttcta 14226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 508
Target Start/End: Complemental strand, 28528548 - 28528430
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| ||||||||||| ||| ||||||||||||||| |||||||| || || ||||||  |||  ||||| |||| || | |||||||| || ||||    
T  28528548 tccaactcattaatctctagatccttcttaatagtttctgttatagtttttttaggtcttcccctacttctagggatttgactcccctccatttgatcta 28528449  T
Q  490 ccctccttactacataatc 508  Q
    |  ||||||||||| ||||    
T  28528448 ctgtccttactacagaatc 28528430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 446
Target Start/End: Original strand, 39515927 - 39516013
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctcta-tatcttcttaatagtttctcttatagttcttctaagt 446  Q
    |||||||||||| ||||| ||||| || ||||||||| |||||| ||||   | |||||||||||||||| ||||||| ||||||||    
T  39515927 cataatgttctaccataatccatattttgatccaactcattaatttctaggtttttcttaatagtttctcgtatagtttttctaagt 39516013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 408
Target Start/End: Original strand, 25715328 - 25715432
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| |   |||| |||| | ||||||||||     || |||||| ||||||||||||||||| |||| | |||||     
T  25715328 aacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaatta-----cgccataatattctatcataaaccatatttcggttcaactc 25715422  T
Q  399 attaatctct 408  Q
    ||||||||||    
T  25715423 attaatctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 390 - 498
Target Start/End: Original strand, 30834065 - 30834174
Alignment:
Q  390 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 488  Q
    |||||||| ||||||||||| ||||| | |||||||||||||||||| | ||||| |||||| |||  |||||  |||| || | || |||||||| |||    
T  30834065 atccaactcattaatctctagatctttcgtaatagtttctcttatagcttttctaggtcttcctctccctctatcgatttgactaccttccatctgatct 30834164  T
Q  489 accctcctta 498  Q
    || |||||||    
T  30834165 actctcctta 30834174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 7922050 - 7921940
Alignment:
Q  370 ctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattc 468  Q
    |||||||| |||||||| | |||||||| ||||||||||| ||| || ||| |||||||| |||||||| ||  | ||||||||||| |||||||||||     
T  7922050 ctatcatataccatact-ctatccaactcattaatctctagatcgtttttactagtttcttttatagtt-ttgaaggtcttcatctacctctagtgattt 7921953  T
Q  469 gattgccctccat 481  Q
     |||| |||||||    
T  7921952 aattgtcctccat 7921940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 460
Target Start/End: Complemental strand, 9509549 - 9509441
Alignment:
Q  353 aattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttca 451  Q
    ||||||| |||||||||| ||||||||||||| || | || |||| ||||  || || ||| ||| ||||||||| |||||||||| ||||| ||||||     
T  9509549 aattacgccataatgttcaatcataaaccatatttggctctaactcattaggctgtaaatctttcctaatagtttatcttatagtttttctaggtcttcc 9509450  T
Q  452 tctaactct 460  Q
    |||| ||||    
T  9509449 tctacctct 9509441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 443
Target Start/End: Original strand, 11331254 - 11331346
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttcta 443  Q
    ||||||| ||||||||||  ||||||||||||| ||  |||||||| ||||| ||||| ||||| |  |||||||||||||||| || |||||    
T  11331254 aaattacatcataatgtttcatcataaaccatatttaaatccaacttattaacctctaaatcttttcaaatagtttctcttatactttttcta 11331346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 443
Target Start/End: Original strand, 11489275 - 11489367
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttcta 443  Q
    ||||||| ||||||||||  ||||||||||||| ||  |||||||| ||||| ||||| ||||| |  |||||||||||||||| || |||||    
T  11489275 aaattacatcataatgtttcatcataaaccatatttaaatccaacttattaacctctaaatcttttcaaatagtttctcttatactttttcta 11489367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 450
Target Start/End: Original strand, 19969301 - 19969361
Alignment:
Q  391 tccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||| ||||||||||| |||||  ||||||||||||||||||||| ||||| ||||||    
T  19969301 tccaactcattaatctctagatctttgttaatagtttctcttatagtttttctaggtcttc 19969361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 499
Target Start/End: Complemental strand, 37263523 - 37263415
Alignment:
Q  391 tccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctac 490  Q
    ||||||| ||| ||||||| |||||||| |||||||| || |||||  ||||| ||||||  ||| ||||||||||| ||   ||||||||||| | |||    
T  37263523 tccaactcattgatctctagatcttcttgatagtttcactaatagtatttctaggtcttcccctacctctagtgatttgacacccctccatctgatttac 37263424  T
Q  491 cctccttac 499  Q
     ||||||||    
T  37263423 tctccttac 37263415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 467
Target Start/End: Complemental strand, 51584912 - 51584860
Alignment:
Q  415 tcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    ||||||||||||||||||||||| ||||| ||||||  ||| |||||||||||    
T  51584912 tcttaatagtttctcttatagtttttctaggtcttcccctacctctagtgatt 51584860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 508
Target Start/End: Original strand, 853873 - 853992
Alignment:
Q  390 atccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 488  Q
    |||||||| | ||||||||| ||| |||||||||||||||| ||||| | || || |||||| |||  ||||||||||| || |   || ||||||||      
T  853873 atccaactcactaatctctagatccttcttaatagtttctcgtatagattttttaggtcttcctctgcctctagtgatttgactaatcttcatctggtaa 853972  T
Q  489 accctccttactacataatc 508  Q
    || |||||||||||||||||    
T  853973 actctccttactacataatc 853992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 441
Target Start/End: Complemental strand, 1661648 - 1661561
Alignment:
Q  355 ttacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttc 441  Q
    ||||| || |||||||||||| |||||| | |||| |||||||  ||||| |||| ||| ||| |||||||||||||||||| |||||    
T  1661648 ttacgccaaaatgttctatcacaaaccacatttcggtccaactcgttaatttctaaatctttcctaatagtttctcttataggtcttc 1661561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 12930361 - 12930444
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttata 434  Q
    ||||||||||||||| |||||||||||| |||| || ||||||||| | |||||| || | | ||| ||||| |||||||||||    
T  12930361 aaattacgtcataatcttctatcataaatcatatttggatccaactcactaatctttaaatttttcataataatttctcttata 12930444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 18469132 - 18469241
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctct--atatcttcttaatagtttctcttatagttcttctaagtctt 449  Q
    |||||||  |||||||||| ||||||||| ||| ||  |||||||| ||| | ||||  |||| ||| ||| ||||||||||||| || |||||||||||    
T  18469132 aaattacaccataatgttcgatcataaactatatttgtatccaactcattgacctcttaatat-ttcctaaaagtttctcttataatttttctaagtctt 18469230  T
Q  450 catctaactct 460  Q
    |||||| ||||    
T  18469231 catctacctct 18469241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 415
Target Start/End: Original strand, 27072537 - 27072600
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    |||||||| |||||||||||||||||||||||| |||  |||||||  ||||| |||| |||||    
T  27072537 aaattacgccataatgttctatcataaaccatatttctgtccaactctttaatttctaaatctt 27072600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 394
Target Start/End: Original strand, 28090696 - 28090786
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatcca 394  Q
    ||||||||||||  ||||||||||||| | | |||| |||| | ||||||||||     || |||||||||||||||||||||||| || ||||||    
T  28090696 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaatta-----cgccataatgttctatcataaaccatatttggatcca 28090786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 28511851 - 28511906
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctc 407  Q
    |||||||| |||||||||||||||||||||||  || | ||||||| |||||||||    
T  28511851 aaattacgccataatgttctatcataaaccatgttttggtccaactcattaatctc 28511906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 437
Target Start/End: Original strand, 38807673 - 38807807
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | || |||||||     || |||| ||||||||||||||||||| || |||||||||     
T  38807673 aacaacaaccaagccttatcccactaagtggggtcggctacatggaacaaatta-----cgccatagtgttctatcataaaccatatttggatccaactc 38807767  T
Q  399 attaatctctatat-cttcttaatagtttctcttatagtt 437  Q
     || | ||||| || |||  |||| |||||||||||||||    
T  38807768 gttgacctctaaatcctttctaatggtttctcttatagtt 38807807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 409
Target Start/End: Original strand, 4707223 - 4707327
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||| ||||||||||||||||| | || |||||||||     
T  4707223 aacaacaaccaagccttatcccactaagtggggtcggctacat-gatcaaatta-----cgccatagtgttctatcataaaccaaatttggatccaactc 4707316  T
Q  399 attaatctcta 409  Q
    ||||| |||||    
T  4707317 attaacctcta 4707327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 467
Target Start/End: Complemental strand, 12231559 - 12231481
Alignment:
Q  390 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    |||||||| ||||||||| | ||||| ||||||||| |||||||||||| |||||||| ||| || | || ||||||||    
T  12231559 atccaactcattaatctcgagatctttcttaatagtctctcttatagtttttctaagtattcctccacctttagtgatt 12231481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 39140747 - 39140669
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctc 429  Q
    |||||||| ||||||||||||||  |||||||| || ||||||||| ||||| ||||| | | ||| ||||||||||||    
T  39140747 aaattacgccataatgttctatctgaaaccatatttggatccaactaattaacctctaaatttttcctaatagtttctc 39140669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 40920588 - 40920642
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    |||||| |||||||||| |||||| ||| |||||||| ||||||||||| |||||    
T  40920588 cataatattctatcatataccatatttctatccaactcattaatctctagatctt 40920642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 503
Target Start/End: Original strand, 52160356 - 52160438
Alignment:
Q  421 tagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactaca 503  Q
    ||||||||||||||||| ||||  |||||||| |  ||||||||||| || | |||||||||| |||||| ||  ||||||||    
T  52160356 tagtttctcttatagtttttctctgtcttcatatgcctctagtgatttgactaccctccatctagtctactcttgttactaca 52160438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 414
Target Start/End: Original strand, 52900692 - 52900754
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct 414  Q
    ||||| || |||| ||||||||||||||||||| |||  ||||||| ||||||||||| ||||    
T  52900692 aaattccgccatagtgttctatcataaaccatatttcagtccaactcattaatctctaaatct 52900754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 8676942 - 8676999
Alignment:
Q  379 accatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 435  Q
    |||||| |||| ||||||| ||||||||||| ||| || |||||||||||||||||||    
T  8676942 accatatttcggtccaactcattaatctctaaatcttttttaatagtttctcttatag 8676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 10200356 - 10200441
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagt 436  Q
    |||||||  ||| |||||||||||||||||||| || ||||||||| ||  ||||||| ||||| | ||||||| ||||| |||||    
T  10200356 aaattacaccatgatgttctatcataaaccatatttggatccaactcatcgatctctaaatcttttctaatagtctctctcatagt 10200441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 502
Target Start/End: Complemental strand, 10272428 - 10272339
Alignment:
Q  413 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactac 502  Q
    ||||||||||||||||||||||  | ||||| ||||||  ||| ||||||||||| || | || |||||||| ||| | |||||| ||||    
T  10272428 cttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcccatccatctgatctcctctccttcctac 10272339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 443
Target Start/End: Original strand, 16272878 - 16272963
Alignment:
Q  359 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttcta 443  Q
    |||||| ||||||||||||||||||| || ||| | ||| |||||||| || ||  ||| ||||| ||||||| ||||||||||||    
T  16272878 gtcatattgttctatcataaaccataattagatactactcattaatctataaatatttcataataatttctctaatagttcttcta 16272963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 19908085 - 19908142
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    ||||||||  ||||||||| ||||||||||||| ||  |||||||| |||||||||||    
T  19908085 aaattacgcaataatgttcaatcataaaccatatttgaatccaactcattaatctcta 19908142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 490
Target Start/End: Original strand, 52442640 - 52442717
Alignment:
Q  413 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctac 490  Q
    |||||| ||||||||||||||| || ||||| |||||| |||| |||||| |||| || | || |||||||| |||||    
T  52442640 cttcttgatagtttctcttatatttgttctaggtcttcctctacctctagagatttgactcccttccatctgatctac 52442717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 460
Target Start/End: Complemental strand, 8628249 - 8628153
Alignment:
Q  365 atgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    |||||||||| ||||| ||| || |||| || | ||||| ||||| ||||| | ||||||||||| |||||||| ||||| |||||| |||| ||||    
T  8628249 atgttctatcgtaaactatattttgatcaaattcattaacctctaaatctttcctaatagtttctgttatagtttttctaggtcttcctctacctct 8628153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 15438859 - 15438907
Alignment:
Q  368 ttctatcataaaccatacttcgatccaactgattaatctctatatcttc 416  Q
    ||||||||||||||||| || |||| |||| ||||||||||| ||||||    
T  15438859 ttctatcataaaccatattttgatctaactcattaatctctaaatcttc 15438907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 384
Target Start/End: Complemental strand, 19822120 - 19822088
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccata 384  Q
    |||||||||| ||||||||||||||||||||||    
T  19822120 aaattacgtcgtaatgttctatcataaaccata 19822088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 348 - 384
Target Start/End: Complemental strand, 39896799 - 39896763
Alignment:
Q  348 aattaaattacgtcataatgttctatcataaaccata 384  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  39896799 aattaaattacgccataatgttatatcataaaccata 39896763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 44905556 - 44905600
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||| ||||||||||||||| ||||||| || ||||||||||||    
T  44905556 acatgtccaaaccacctaagcatattttctaccgtcttttctact 44905600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 353 - 450
Target Start/End: Original strand, 40116519 - 40116617
Alignment:
Q  353 aattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||| || ||||||||||||||||||||| |||| ||||||| ||||||||||| |||| || |||||||||||||||||||| ||||| ||||||    
T  40116519 aattacgccacaatgttctatcataaaccatatttcggtccaactcattaatctctaaatctatcctaatagtttctcttatagtttttctaggtcttc 40116617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 39600731 - 39600840
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||  |||||||||||||| ||||||| | || ||||||||| ||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||||    
T  39600731 aaattacaccataatgttctatcgtaaaccagatttggatccaactcattaacctctaaatctttcttaatagtttctcttatagtttttctaggtcttc 39600830  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  39600831 ctctacctct 39600840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 45289151 - 45289227
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 437  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||| ||| ||| ||||||||||||||||||||    
T  45289151 ataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctcttatagtt 45289227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 503
Target Start/End: Complemental strand, 38431069 - 38430928
Alignment:
Q  363 taatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactcta 461  Q
    |||||||||||||||||||||| || ||||||||| ||||| ||||| | ||| |  ||||||||||||| ||||| |||||||||||| |||| ||||     
T  38431069 taatgttctatcataaaccatatttggatccaactcattaacctctaaaccttccacaatagtttctcttgtagtttttctaagtcttcctctacctctt 38430970  T
Q  462 gtgattcgattgccctccatctggtctaccctccttactaca 503  Q
     ||||| || |  |||||||||| ||||| || | |||||||    
T  38430969 ttgatttgactctcctccatctgatctactcttcatactaca 38430928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 352 - 426
Target Start/End: Complemental strand, 36304198 - 36304123
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagttt 426  Q
    |||||||| |||||||| ||||||||||||||| || ||||||||| ||||||||||| ||| |||||||||||||    
T  36304198 aaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 414
Target Start/End: Original strand, 40116388 - 40116450
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct 414  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||    
T  40116388 aaattacgccataatgttctatcataaaccatatttcggtccaactcattaatctctaaatct 40116450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 433
Target Start/End: Complemental strand, 49841848 - 49841766
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttat 433  Q
    |||||| | ||||||||||||||||| |||||| |||||||||||| |||||||| || ||| || |||||||||||||||||    
T  49841848 aaattatgccataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagtttctcttat 49841766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 508
Target Start/End: Original strand, 42026586 - 42026743
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||| ||||||||||||||||| |||||| ||| ||| |||| ||||||| |||||||  ||||||||||||||||||||| | |  |  ||||||    
T  42026586 aaataacgccataatgttctatcatataccatatttctatctaactcattaatccctatatcaatcttaatagtttctcttatagctttgattggtcttc 42026685  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     |||  |||||| |||  ||||  ||||| |||| ||||| |||||||||| ||||||    
T  42026686 ctctgcctctagggatgtgattatcctccgtctgatctactctccttactaaataatc 42026743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 466
Target Start/End: Complemental strand, 29475918 - 29475805
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||| | ||||||||||||| ||| ||| |||||||| ||||||||||| ||| ||||||||||||  |||||||| | ||||| ||||||    
T  29475918 aaattacgccatagttttctatcataaacaatatttcaatccaactcattaatctctagatctttcttaatagtt--tcttatagcttttctaggtcttc 29475821  T
Q  451 atctaactctagtgat 466  Q
     |||  ||||||||||    
T  29475820 ctctgcctctagtgat 29475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 403
Target Start/End: Original strand, 40106622 - 40106721
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | ||| ||||| | ||||||||||      |||||||||||||||||||||||||| || |||||||||     
T  40106622 aacaacaaccaagccttatcccactaagtggggtccactacattgatcaaattat-----gtcataatgttctatcataaaccatatttggatccaactc 40106716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 554
Target Start/End: Original strand, 42510066 - 42510282
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||||||||| ||||||||||||| || | ||||||| ||| || || | ||| ||| |||| |||||||| |||||| ||||| ||||||    
T  42510066 aaattacgccataatgttcaatcataaaccatattttggtccaactcatttatttccaaatctttcctaatggtttctctgatagtttttctaggtcttc 42510165  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataa-------------tcaacatgcccaaaccacctaagcctatttt 537  Q
     | |  ||||||||||  || |  |||||||||| ||||| |||||||| ||| ||             || ||||| ||||||||||||||||||||||    
T  42510166 ctttgcctctagtgatctgactatcctccatctgatctactctccttaccacaaaatctataggtcttctctacatgtccaaaccacctaagcctatttt 42510265  T
Q  538 ccactgtcttttctact 554  Q
    ||||| |||||||||||    
T  42510266 ccactatcttttctact 42510282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 506
Target Start/End: Original strand, 23534620 - 23534775
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| ||||||||||||||||||| |||| | |  ||||||| |||||||||||  || ||| ||||||||||| ||||| || || |  ||||||    
T  23534620 aaattacgccataatgttctatcataaatcatattacagtccaactcattaatctctaagtctttcctaatagtttctgttataatttttttgggtcttc 23534719  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataa 506  Q
     |||| ||||||||||   | |  | |||||||| ||||| |||||||||||||||    
T  23534720 ctctacctctagtgatctaactatcatccatctgatctactctccttactacataa 23534775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 437
Target Start/End: Complemental strand, 49042169 - 49042082
Alignment:
Q  352 aaattacgtcataatgttctatcataaa-ccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagtt 437  Q
    |||||||| |||| |||||||||||||| ||||| || ||||||||| ||||| ||||| ||||| | ||||||||||||||||||||    
T  49042169 aaattacgccatagtgttctatcataaaaccatatttggatccaactcattaacctctaaatctttcctaatagtttctcttatagtt 49042082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 460
Target Start/End: Complemental strand, 54128659 - 54128501
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||      | |||||||||||||||||||||||| || | |||||||     
T  54128659 aacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaattat-----gccataatgttctatcataaaccatatttgggtccaactc 54128565  T
Q  399 attaatctctatatc-ttcttaatagtttctctt-atagttcttctaagtcttcatctaactct 460  Q
    ||| | ||||| ||| ||| | |||||||||||| |||||| ||||| |||||| |||| ||||    
T  54128564 attgacctctaaatctttccttatagtttctcttaatagtttttctaggtcttcctctacctct 54128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 54365025 - 54365124
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||||||||| ||||||||||||||||||| || | || |||  ||||||||| |  || ||| |||||||||||||||||||| ||||| ||||||    
T  54365025 aaattacgtcatagtgttctatcataaaccatattttggtctaacacattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttc 54365124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 299 - 409
Target Start/End: Original strand, 30797824 - 30797929
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||| ||||||| | | ||||  ||| ||||||     ||||||||||||||||||||||||||||| | | || ||||||||||    
T  30797824 aacaacaaccaagccttattccactaagtggggtcggttacatagatc-----aaattacgtcataatgttctatcataaactaaatttggatccaactg 30797918  T
Q  399 attaatctcta 409  Q
    | |||||||||    
T  30797919 aataatctcta 30797929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 299 - 460
Target Start/End: Complemental strand, 48508515 - 48508358
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||| ||||||||||||||||||| ||  ||||||||     
T  48508515 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccatagtgttctatcataaaccatatttgaatccaactc 48508421  T
Q  399 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||| | ||||| || |||  |||| ||||||||||||||| | ||| |||||| |||| ||||    
T  48508420 attgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctct 48508358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 508
Target Start/End: Original strand, 37598220 - 37598376
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||| ||||||||||||||||| | |||||  | |||||||| ||||||||||| || | |||||||||||||||||| |||| ||||| ||| ||    
T  37598220 aaatgacgccataatgttctatcatatatcatacccctatccaactcattaatctctagatatatcttaatagtttctctta-agtttttctaggtcatc 37598318  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
     |||  |||| ||||||  | | | || |||||| ||||| || ||||||||||||||    
T  37598319 ttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatc 37598376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 449
Target Start/End: Complemental strand, 43308781 - 43308696
Alignment:
Q  365 atgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaagtctt 449  Q
    ||||||||||||| | ||||  || |||||||||||||||||||| | | |||||||||||||||||| ||||| ||||| |||||    
T  43308781 atgttctatcatatatcatatctctatccaactgattaatctctagatttttcttaatagtttctcttgtagtttttctaggtctt 43308696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 29601124 - 29601052
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatag 423  Q
    ||||||| ||||||||||||||||||||| ||| ||  |||||||| ||||||||||| ||| ||||||||||    
T  29601124 aaattacatcataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttcttaatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 460
Target Start/End: Original strand, 30294180 - 30294280
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||| |||| ||||||||| ||||||| ||||||||| ||| | || || ||||| || |||||||| |||||||||||||||| |||||| |||| |||    
T  30294180 catagtgttttatcataaatcatacttagatccaactcattgacctataaatcttttttaatagtttatcttatagttcttctaggtcttcctctacctc 30294279  T
Q  460 t 460  Q
    |    
T  30294280 t 30294280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 576
Target Start/End: Original strand, 45289318 - 45289379
Alignment:
Q  513 tgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 576  Q
    |||||||||||||||||||||||||||||  ||||||||||||   |||| |||||||||||||    
T  45289318 tgcccaaaccacctaagcctattttccaccatcttttctactg--aataggtgctaccccaact 45289379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 362 - 455
Target Start/End: Complemental strand, 11284210 - 11284121
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatcta 455  Q
    ||||||||| |||||| |||||| ||  |||||||| |||||||||||   | ||||||||||||||||||||||| ||||| |||||| ||||    
T  11284210 ataatgttcaatcatataccatatttatatccaactcattaatctcta---catcttaatagtttctcttatagtt-ttctaggtcttcctcta 11284121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 460
Target Start/End: Original strand, 19162652 - 19162746
Alignment:
Q  366 tgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||||||||||| | ||||||||  |||||||| ||||||||||| ||||| | |||||||||||||||||| | | ||| |||||| |||||||||    
T  19162652 tgttctatcatta-ccatacttgcatccaactcattaatctctaaatctttcctaatagtttctcttatagatttcctaggtcttcctctaactct 19162746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 349 - 455
Target Start/End: Original strand, 48953466 - 48953575
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata---tcttcttaatagtttctcttatagttcttctaag 445  Q
    |||||||||||||||| |||||||||||||| |||| || ||||||||| ||| | || ||||   |||| |||||  |||||||||||||| | ||| |    
T  48953466 attaaattacgtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttttaatgatttctcttatagttttcctagg 48953565  T
Q  446 tcttcatcta 455  Q
    ||||| ||||    
T  48953566 tcttcctcta 48953575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 402
Target Start/End: Complemental strand, 39208840 - 39208790
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgatta 402  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||| ||||    
T  39208840 aaattacgtcataatgttctatcataaaccatatttggatcctactcatta 39208790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 507
Target Start/End: Complemental strand, 11581613 - 11581520
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataat 507  Q
    |||||||||||||||||||||||| ||||| ||||||   || ||||||||||| || |  ||| |||||| | ||| || |||||||||||||    
T  11581613 ttcttaatagtttctcttatagtttttctaggtcttctcatacctctagtgatttgactcacctacatctgatgtactcttcttactacataat 11581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 32170637 - 32170580
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||| ||||||||||| ||||||| |||||| ||| |||||||| |||||||||||    
T  32170637 aaattatgtcataatgttatatcatagaccatatttctatccaacttattaatctcta 32170580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 576
Target Start/End: Original strand, 50960857 - 50960919
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 576  Q
    ||||||||||||||||||||||||||||| ||  |||||||||    |||||| |||||||||||||    
T  50960857 acatgcccaaaccacctaagcctattttctaccatcttttcta----ctataggtgctaccccaact 50960919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 19758110 - 19758062
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||||||||||||||||||| |  ||||||||| |||||||||||    
T  19758110 cataatgttctatcataaaccatattgagatccaactcattaatctcta 19758062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 36820067 - 36820119
Alignment:
Q  392 ccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 443  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||| |||||    
T  36820067 ccaactcattaatctctagatctttcttaatagtttctcttatagtttttcta 36820119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 37351592 - 37351488
Alignment:
Q  399 attaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 497  Q
    ||||||||||| ||||| ||| || |||||||| |||||| ||||| ||||||  ||| ||||||||||| |  | || |||||||| ||||| ||||||    
T  37351592 attaatctctagatctttcttgattgtttctctaatagtttttctaggtcttcccctacctctagtgatttgcctcccttccatctgatctactctcctt 37351493  T
Q  498 actac 502  Q
    |||||    
T  37351492 actac 37351488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 49503778 - 49503822
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||    
T  49503778 acatgcccaaaccacctaagcctattttctaccatcttttctact 49503822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 384
Target Start/End: Complemental strand, 51027790 - 51027758
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccata 384  Q
    |||||||||||||||||||||||||||||||||    
T  51027790 aaattacgtcataatgttctatcataaaccata 51027758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 54128436 - 54128392
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||    
T  54128436 acatgcccaaaccacctaagcctattttctaccatcttttctact 54128392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 55244501 - 55244453
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    ||||||||||||||||| |||||| ||| |||||||| |||||||||||    
T  55244501 cataatgttctatcatataccatatttctatccaactcattaatctcta 55244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 19676131 - 19676230
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||| ||| ||||||| ||||||||| | |||| || ||||||||| ||||| ||||| || || | ||||||||||||||| |||| ||||| ||||||    
T  19676131 aaatcacgccataatgctctatcatacagcatatttggatccaactcattaacctctaaatttttcctaatagtttctcttacagtttttctaggtcttc 19676230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 513
Target Start/End: Original strand, 31261055 - 31261153
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacat 513  Q
    ||||| |||||||||||||||||| ||||| |||||| |||  ||||||||||| || |  |||||||||| ||||| | | |||||||| |||| ||||    
T  31261055 ttcttgatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgact-acctccatctgatctactcacattactacaaaatctacat 31261153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 553
Target Start/End: Original strand, 46431897 - 46431940
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctac 553  Q
    |||||||||||||||||||||| | |||||| ||||||||||||    
T  46431897 acatgcccaaaccacctaagccgagtttccattgtcttttctac 46431940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 450
Target Start/End: Original strand, 50960687 - 50960786
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||  ||||||| ||||| ||| |||||| || ||||||||| ||||||||||| | | ||| ||||||||||||||| | || ||||| ||||||    
T  50960687 aaattacaccataatggtctatgatacaccatatttggatccaactcattaatctctaaacctttcctaatagtttctcttaaattttttctaggtcttc 50960786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 572
Target Start/End: Original strand, 33272246 - 33272308
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctacccc 572  Q
    |||||||||||||| |||||||||||||| ||   |||||||||| | ||||| |||||||||    
T  33272246 acatgcccaaaccatctaagcctattttctaccaacttttctactatatataggtgctacccc 33272308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 496
Target Start/End: Original strand, 33755394 - 33755537
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||||||||||||||  |||  |||||||  | | ||||||| |||||||||||  | || | |||||||||||||||||||| ||||| || |||    
T  33755394 aaattacgtcataatgttcactca--aaccatatcttggtccaactcattaatctctaagtttttcctaatagtttctcttatagtttttctaggttttc 33755491  T
Q  451 atctaactctagtgattcgattgccctccatctggtctaccctcct 496  Q
     |||  |||||||||| |||    |||||||||| ||||| |||||    
T  33755492 ctctgcctctagtgatccgaccatcctccatctgatctactctcct 33755537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 552
Target Start/End: Complemental strand, 39235196 - 39235154
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttcta 552  Q
    ||||||||||||||||||||||||||||| ||  |||||||||    
T  39235196 acatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 40991663 - 40991609
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatct 406  Q
    |||||||  |||||||||||||||||||||||| || | ||||||| ||||||||    
T  40991663 aaattacaccataatgttctatcataaaccatattttggtccaactcattaatct 40991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 443
Target Start/End: Original strand, 46431767 - 46431821
Alignment:
Q  390 atccaactgattaatctctatatcttctt-aatagtttctcttatagttcttcta 443  Q
    |||||||| ||||||||||| ||||| || ||||||||||||||||||| |||||    
T  46431767 atccaactcattaatctctagatcttttttaatagtttctcttatagtttttcta 46431821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 2340814 - 2340883
Alignment:
Q  399 attaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    ||||||||||| ||||| |||||||||||||||||||||| | ||| |||||  |||| || ||||||||    
T  2340814 attaatctctagatctttcttaatagtttctcttatagttttcctaggtctttctctagctttagtgatt 2340883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 437
Target Start/End: Complemental strand, 39235361 - 39235284
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 437  Q
    |||||||||||||| ||||||||| || ||||||||| |||||  |||| ||| ||| ||||||||| || |||||||    
T  39235361 cataatgttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagtttatcctatagtt 39235284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 41842573 - 41842654
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctctta 432  Q
    |||||||  ||||||||||||||| |||||||| ||| ||| |||| ||||| ||||| |||| |||| ||||||| |||||    
T  41842573 aaattacaccataatgttctatcaaaaaccatatttcaatctaactcattaacctctagatctatctttatagtttttctta 41842654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 409
Target Start/End: Complemental strand, 44571643 - 44571602
Alignment:
Q  368 ttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    ||||||||||||||||| || ||||||||| |||||||||||    
T  44571643 ttctatcataaaccatatttggatccaactcattaatctcta 44571602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 352
Target Start/End: Original strand, 49503570 - 49503623
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaatta 352  Q
    |||||||||||| |||||||||||||| ||| |||| |||| | ||||||||||    
T  49503570 aacaacaaccaagccttatcccactaagtagggtcggctacatggatcaaatta 49503623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 384
Target Start/End: Complemental strand, 2195305 - 2195273
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccata 384  Q
    ||||||| |||||||||||||||||||||||||    
T  2195305 aaattacatcataatgttctatcataaaccata 2195273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 19737207 - 19737159
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    ||||||||| |||||||||||||| |  ||||||||| |||||||||||    
T  19737207 cataatgttttatcataaaccatattgagatccaactcattaatctcta 19737159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 21200606 - 21200562
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||||||||||||||| ||| |||||||  |||||||||||    
T  21200606 acatgcccaaaccacctaagtctagtttccaccatcttttctact 21200562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 26490373 - 26490329
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||| ||||||||||||||||||||||| ||  |||||||||||    
T  26490373 acatgtccaaaccacctaagcctattttctaccatcttttctact 26490329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 37534430 - 37534474
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||  ||||||||||||||||  |||||||||||    
T  37534430 acatgcccaaaccaggtaagcctattttccaccatcttttctact 37534474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 41452828 - 41452888
Alignment:
Q  390 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 449  Q
    |||||||| ||||||||||| ||||| |||||||||||  ||||||||| ||||| |||||    
T  41452828 atccaactcattaatctctagatctttcttaatagtttaacttatagtttttctatgtctt 41452888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 538
Target Start/End: Original strand, 48734359 - 48734387
Alignment:
Q  510 acatgcccaaaccacctaagcctattttc 538  Q
    |||||||||||||||||||||||||||||    
T  48734359 acatgcccaaaccacctaagcctattttc 48734387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 403
Target Start/End: Original strand, 55384063 - 55384119
Alignment:
Q  347 aaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaa 403  Q
    |||| |||||||||||||| ||||||||||||| |||| || ||| ||||| |||||    
T  55384063 aaatcaaattacgtcataacgttctatcataaatcatatttagattcaacttattaa 55384119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 361 - 508
Target Start/End: Complemental strand, 47147594 - 47147448
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||||||||||||| | ||||  || |||||||| ||||||||||| ||||| |||||||||||||  ||||||| ||||| |||||| |||  |||    
T  47147594 cataatgttctatcatatatcata--tctatccaactcattaatctctagatctttcttaatagtttcttctatagtttttctaggtcttcctctgcctc 47147497  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    ||||||| ||| | | ||||||||| | ||| |||||||||||||||||    
T  47147496 tagtgatccgactactctccatctgatttactctccttactacataatc 47147448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 51421962 - 51421853
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||||||||||||||||||||||||||||||  || ||||||| | ||||| ||||| ||| ||| |||||||||||||||||||| |||||| |||||    
T  51421962 aaattacgtcataatgttctatcataaaccatttttggatccaattcattaacctctaaatctttcctaatagtttctcttatagtttttctaaatcttc 51421863  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  51421862 ctctacctct 51421853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 299 - 450
Target Start/End: Original strand, 45204842 - 45204988
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | || | |||| ||||||||||||     || | |||||||||||||||||||||| || |||||||||     
T  45204842 aacaacaaccaagccttatcccactaagttgggtgggctacatagatcaaatta-----cgcc-taatgttctatcataaaccatatttggatccaactt 45204935  T
Q  399 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||| ||||| ||| ||| |||||||||||||||||||| ||||| ||||||    
T  45204936 attaaactctaaatctttcctaatagtttctcttatagtttttctaggtcttc 45204988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 299 - 461
Target Start/End: Original strand, 2557673 - 2557832
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||||| | || | |||| | |||||||||| |  |    ||||||||||||||||||||||| ||||||||||||     
T  2557673 aacaacaaccaagccttatcccactaaatggagttggctacatggatcaaattacacca----ataatgttctatcataaaccatatttcgatccaactc 2557768  T
Q  399 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactcta 461  Q
     |||||||  | || |||||||||||||||||||| |||| |||||  ||||| |||| |||||    
T  2557769 gttaatcttcagatccttcttaatagtttctcttacagtttttctagatcttcctctacctcta 2557832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 365 - 533
Target Start/End: Original strand, 21945701 - 21945872
Alignment:
Q  365 atgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagt 463  Q
    |||||||||||||||||||| |||  ||||||| |||||| || | ||| ||| ||||||||||| | |||||| ||||| |||||| ||   |||||||    
T  21945701 atgttctatcataaaccatatttcagtccaactcattaatttccaaatctttcctaatagtttctatgatagtttttctaggtcttcctcagcctctagt 21945800  T
Q  464 gattcgattgccctccatctggtctaccctccttactacataa--tcaacatgcccaaaccacctaagccta 533  Q
    |||  || |  |||||||||| ||||| |||||||||||| ||  || ||||| ||||||||||||||||||    
T  21945801 gatgtgactatcctccatctgatctactctccttactacagaatctctacatgtccaaaccacctaagccta 21945872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 299 - 415
Target Start/End: Complemental strand, 55008026 - 55007915
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||     |||||||||||||||| |||||||||||||||| |||| |||||||     
T  55008026 aacaacaaccaagccttatcccactaagtggggtcggctacatggatc-----aaattacgtcataatgatctatcataaaccatatttcggtccaactc 55007932  T
Q  399 attaatctctatatctt 415  Q
    ||||||||||| |||||    
T  55007931 attaatctctaaatctt 55007915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 299 - 425
Target Start/End: Complemental strand, 25575104 - 25574982
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||||| | |||  |||| | |||||||||| |  ||     ||||||||||||||||||||| ||||||||||||     
T  25575104 aacaacaaccaagccttatcccactaaatggggtctgctacatggatcaaattacaccac-----aatgttctatcataaaccatatttcgatccaactc 25575010  T
Q  399 attaatctctatatc-ttcttaatagtt 425  Q
    ||||||||||| ||| ||||||||||||    
T  25575009 attaatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 349 - 443
Target Start/End: Original strand, 56439618 - 56439713
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 443  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||| |||||| || | ||| ||| ||||||||||||| |||||| |||||    
T  56439618 attaaattacgctataatgttctatcataaaccatatttcgatccaactaattaatttccaaatctttcataatagtttctctgatagtttttcta 56439713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 26024900 - 26024986
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 437  Q
    |||||||  |||||||||||||||||||||||   ||||||||||| ||||||||||| ||| |||||||||||||||| |||||||    
T  26024900 aaattacaccataatgttctatcataaaccatgtctcgatccaactcattaatctctagatctttcttaatagtttctcatatagtt 26024986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 352 - 448
Target Start/End: Complemental strand, 37488323 - 37488226
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtct 448  Q
    |||||||| ||||||| |||||||| ||||||| || |||| |||| |||||| |||| ||||| |||||||||||||||||||||| ||||| ||||    
T  37488323 aaattacgccataatgctctatcattaaccatattttgatcaaacttattaatttctagatctttcttaatagtttctcttatagtttttctaggtct 37488226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 503
Target Start/End: Complemental strand, 26356811 - 26356699
Alignment:
Q  392 ccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctac 490  Q
    |||||| ||||||||||| ||| ||| ||| |||||||||||||||| ||||| ||||||  ||| ||||||||||| || | ||||||||| | |||||    
T  26356811 ccaactcattaatctctagatccttcataacagtttctcttatagtttttctaggtcttcccctacctctagtgatttgactcccctccatccgatctac 26356712  T
Q  491 cctccttactaca 503  Q
     ||||||||||||    
T  26356711 tctccttactaca 26356699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 508
Target Start/End: Original strand, 42639079 - 42639227
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||||||||||| | |||||| ||| |||||||| ||||||| ||| ||| ||||||||||||||||||  |||| |||||  | ||| |||| |||    
T  42639079 cataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatagtttctcttgcagtttttctagatattcctctacctc 42639178  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||||||| || | ||||||||||  | ||||| |||||| ||| ||||    
T  42639179 tagtgatttgactcccctccatctaatttaccccccttaccacagaatc 42639227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 361 - 466
Target Start/End: Original strand, 13805324 - 13805430
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||||||||||||||||||||||| |||  ||||||| |||| |||| | ||| ||||| |||||||||||||||||| ||||| || ||| |||  |||    
T  13805324 cataatgttctatcataaaccatatttccgtccaacttattactctcaaaatctttcttcatagtttctcttatagtttttctaggttttcctctgcctc 13805423  T
Q  460 tagtgat 466  Q
    |||||||    
T  13805424 tagtgat 13805430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 21107215 - 21107125
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    ||||| |||||||||||||||||| || ||||||||| ||||||| ||| | | ||| |||||||||||||||||||| ||||| ||||||    
T  21107215 cataaagttctatcataaaccatatttggatccaactaattaatcactaaaactttcctaatagtttctcttatagtttttctaggtcttc 21107125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 361 - 430
Target Start/End: Original strand, 30621260 - 30621330
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctct 430  Q
    |||||||||||||||||||||||| |||| ||||||  ||||||||||| ||| |||||||||||||||||    
T  30621260 cataatgttctatcataaaccatatttcggtccaacacattaatctctaaatctttcttaatagtttctct 30621330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 40420264 - 40420345
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttata 434  Q
    |||||||||| |||||||||||||||||||||| |  ||| ||||| |||||||||||| | || ||||||||||||||||||    
T  40420264 aaattacgtcgtaatgttctatcataaaccatattaggattcaactcattaatctctat-tttttttaatagtttctcttata 40420345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 465
Target Start/End: Complemental strand, 49987640 - 49987526
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| ||||||| |||||||| ||||||| || |||||| || ||| ||||| |  |||| |||||||||||||||||||||| ||||| ||||||    
T  49987640 aaattacgccataatgctctatcatgaaccatagttggatccatctcatttatctccaagtctttcttaatagtttctcttatagtttttctaggtcttc 49987541  T
Q  451 atctaactctagtga 465  Q
     |||  |||||||||    
T  49987540 ctctgcctctagtga 49987526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 35690503 - 35690394
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| ||||||||||||||||||||| |  || |||| |||| ||||| ||||| || || | |||||||||||||||||||| ||||| ||||||    
T  35690503 aaattacgccataatgttctatcataaaccctgattggatcaaactcattaacctctaaatttttcgtaatagtttctcttatagtttttctaggtcttc 35690404  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  35690403 ctctacctct 35690394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 352 - 435
Target Start/End: Complemental strand, 44385062 - 44384979
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 435  Q
    ||||||| ||||||||||||||||||||||||| |   |||||||| ||||||||||| ||| |||||||||| |||||||||||    
T  44385062 aaattacatcataatgttctatcataaaccatattaatatccaacttattaatctctagatctttcttaatag-ttctcttatag 44384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 433
Target Start/End: Original strand, 26037507 - 26037637
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||| |||| | |||| |||||     || |||| ||||||||||||||||||| || |||||||||     
T  26037507 aacaacaaccaaaccttatcccactaagtggggtcggctacatggatccaatta-----cgccatagtgttctatcataaaccatatttggatccaactc 26037601  T
Q  399 attaatctctatatc-ttcttaatagtttctcttat 433  Q
    ||| | ||||| ||| ||| ||||||||||||||||    
T  26037602 attcacctctaaatctttcctaatagtttctcttat 26037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 503
Target Start/End: Complemental strand, 28351782 - 28351639
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||| ||||||  |||||| ||| || ||||||||| | ||||||||| ||||| | |||||||||||||||||||| ||||| |||||  |||| |||    
T  28351782 cataaggttctactataaactatatttggatccaactcaataatctctaaatctttcgtaatagtttctcttatagtttttctaggtctttctctacctc 28351683  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttactaca 503  Q
    | || ||  || |  |||||||||| ||||| ||||||||||||    
T  28351682 ttgtaatctgactatcctccatctgatctactctccttactaca 28351639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 514
Target Start/End: Original strand, 34233086 - 34233237
Alignment:
Q  364 aatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctag 462  Q
    |||||||||||||||||| || || |||| |||| |||||||||||  || || | |||||||||||| |||||| ||||| || ||| |||  ||||||    
T  34233086 aatgttctatcataaaccttattttgatctaactcattaatctctaggtctttatgaatagtttctctgatagtttttctaggttttcctctgcctctag 34233185  T
Q  463 tgattcgattgccctccatctggtctaccctccttactacataatcaacatg 514  Q
    ||||  ||    |||||||||  ||||| ||||||||||||||||| |||||    
T  34233186 tgatctgacgatcctccatctcatctactctccttactacataatctacatg 34233237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 448
Target Start/End: Complemental strand, 50680970 - 50680875
Alignment:
Q  354 attacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtct 448  Q
    |||||| |||||| |  |||||||||||||| | |||||||||| ||||||||||| ||| |||| |||| |||||||||||||| ||||| ||||    
T  50680970 attacgccataatatgttatcataaaccatattccgatccaactcattaatctctagatctttctaaataatttctcttatagtttttctaggtct 50680875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 466
Target Start/End: Complemental strand, 53540522 - 53540407
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||| | |||||||||||||||||||||||| ||   ||||||| ||||||||| |  || ||| ||||||||| |||||||||| ||||| ||||||    
T  53540522 aaattatgccataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatagtttatcttatagtttttctaggtcttc 53540423  T
Q  451 atctaactctagtgat 466  Q
     |||  ||||||||||    
T  53540422 ctctgcctctagtgat 53540407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 354 - 443
Target Start/End: Complemental strand, 50662618 - 50662528
Alignment:
Q  354 attacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttctt-aatagtttctcttatagttcttcta 443  Q
    |||||| ||||||||  |||||||||||||| ||||||| |||| ||||||||||| ||||| || |||| ||||||||||| || |||||    
T  50662618 attacgccataatgtgttatcataaaccatatttcgatcaaactcattaatctctagatctttttaaataatttctcttataatttttcta 50662528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 443
Target Start/End: Original strand, 33225885 - 33225975
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 443  Q
    |||| ||||||||||||||||||||||| |||| || |||  ||||  |||||||||| ||| ||||||||||||||||||||| || |||||    
T  33225885 aaatcacgtcataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctcttataatttttcta 33225975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 409
Target Start/End: Original strand, 34208319 - 34208376
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    ||||| || |||||||||||||||||||||||| || ||||||||| |||||||||||    
T  34208319 aaattgcgccataatgttctatcataaaccatatttggatccaactcattaatctcta 34208376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 39708665 - 39708556
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||| ||||||||||||||||||| || ||||||||| ||| | ||||| || |||  |||| ||||||||||||||| | ||| ||||||    
T  39708665 aaattacgacatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttc 39708566  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  39708565 ctctacctct 39708556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 53518373 - 53518482
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||| |||| ||||||||||||||||||| || ||||||||| ||||| ||||| ||| ||| || |||||| ||| |||||| ||||| | ||||    
T  53518373 aaattacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaaatctttcctattagtttttctcatagtttttctaggccttc 53518472  T
Q  451 atctaactct 460  Q
     |||| ||||    
T  53518473 ctctacctct 53518482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 31043290 - 31043218
Alignment:
Q  366 tgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 437  Q
    |||||||||| |||||||| || ||||||||| ||||||||||| ||| ||| |||||||||||||| |||||    
T  31043290 tgttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctcttttagtt 31043218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 31339751 - 31339699
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    ||||||||||||||||||||  |||||| |||||||||||| |||||||||||    
T  31339751 acgtcataatgttctatcatgtaccatatttcgatccaactcattaatctcta 31339699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 490
Target Start/End: Original strand, 40018250 - 40018378
Alignment:
Q  363 taatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactcta 461  Q
    ||||||||||||||| | ||||   | |||||||| ||| ||||||| ||||| ||||| ||||| |||||||||| ||||||||||| || |  |||||    
T  40018250 taatgttctatcatatatcatatccctatccaactcattgatctctagatctttcttaacagtttttcttatagtttttctaagtctttatttgcctcta 40018349  T
Q  462 gtgattcgattgccctccatctggtctac 490  Q
    |||||| || | |||| |||||| |||||    
T  40018350 gtgatttgactacccttcatctgatctac 40018378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 362 - 500
Target Start/End: Original strand, 7681970 - 7682109
Alignment:
Q  362 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||||||| |||||||| |||||| ||| ||| |||| |||||||| || || || ||| |||||||||||||||||| ||| | |||||| |||  ||||    
T  7681970 ataatgtcctatcatataccatatttctatctaactcattaatctatagatttttcttgatagtttctcttatagtttttccaggtcttcctctgcctct 7682069  T
Q  461 agtgattcgattgccctccatctggtctaccctccttact 500  Q
    ||||||  || | ||||||||||  |||||  ||||||||    
T  7682070 agtgatgtgactaccctccatctaatctactttccttact 7682109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 361 - 435
Target Start/End: Original strand, 37042723 - 37042798
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 435  Q
    ||||||||||||||| | ||| || ||| |||||||| | ||||||||| ||| ||||||||||||||||||||||    
T  37042723 cataatgttctatcaaataccgtatttctatccaactcaataatctctagatctttcttaatagtttctcttatag 37042798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 448
Target Start/End: Complemental strand, 10209229 - 10209171
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtct 448  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||| ||||| ||||    
T  10209229 tccaactcattaatctctagatccttcttaatagtttctcttatagtttttctaggtct 10209171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 501
Target Start/End: Original strand, 25967359 - 25967461
Alignment:
Q  400 ttaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctta 498  Q
    |||||||||| ||||| || ||||||||||||||||||| ||| |||||||| |||  |||||||||||  | |  ||| |||||| ||||| |||||||    
T  25967359 ttaatctctagatcttttttaatagtttctcttatagttattcaaagtcttcctctgtctctagtgatttaactatccttcatctgatctactctcctta 25967458  T
Q  499 cta 501  Q
    |||    
T  25967459 cta 25967461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 425
Target Start/End: Original strand, 27049227 - 27049301
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtt 425  Q
    |||||||| |||||||||| ||||||||||||| || || |||||| |||||||| || ||| ||||||||||||    
T  27049227 aaattacgccataatgttcgatcataaaccatatttggaaccaactcattaatctataaatctttcttaatagtt 27049301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 5306528 - 5306471
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 409  Q
    |||||||| ||||||||| | |||||||||||| || ||||||||| |||||||||||    
T  5306528 aaattacgccataatgttatgtcataaaccatatttggatccaactcattaatctcta 5306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 349 - 437
Target Start/End: Complemental strand, 16003161 - 16003072
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagtt 437  Q
    |||||||||||||||| |||| ||||||||| |||| || ||||||||| ||| | ||||| || || | |||| |||||||||||||||    
T  16003161 attaaattacgtcatagtgttttatcataaatcatatttagatccaactcattgacctctaaattttttctaatggtttctcttatagtt 16003072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 467
Target Start/End: Complemental strand, 18966774 - 18966721
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    |||||||||||||||||||||||| || || |||||| |||| |||||||||||    
T  18966774 ttcttaatagtttctcttatagttgttttaggtcttcttctacctctagtgatt 18966721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 361 - 437
Target Start/End: Original strand, 31403093 - 31403170
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 437  Q
    ||||||| ||||||||| |||| | ||| |||||||| ||||||||||| ||| ||| ||||||||| ||||||||||    
T  31403093 cataatgctctatcatataccacatttctatccaactaattaatctctagatctttcataatagtttttcttatagtt 31403170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 355 - 408
Target Start/End: Complemental strand, 34379632 - 34379579
Alignment:
Q  355 ttacgtcataatgttctatcataaaccatacttcgatccaactgattaatctct 408  Q
    ||||| |||||| ||||||||||||||||| |||| ||||||| ||||||||||    
T  34379632 ttacgccataatattctatcataaaccatatttcggtccaactcattaatctct 34379579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 361 - 437
Target Start/End: Complemental strand, 47372874 - 47372797
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 437  Q
    ||||||||||||| ||| |||||| ||| |||||||| ||||||||||  ||| || ||| |||||||||||||||||    
T  47372874 cataatgttctataatataccatatttctatccaactcattaatctctggatctttattagtagtttctcttatagtt 47372797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 299 - 423
Target Start/End: Original strand, 55388213 - 55388333
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | |||||| || | |||||||||| |  ||     |||||||||||||||| |||| ||||||| ||||     
T  55388213 aacaacaaccaagccttatcccactaagtggggtcgacaacatggatcaaattacaccac-----aatgttctatcataaatcatatttcgatctaactc 55388307  T
Q  399 attaatctctatatc-ttcttaatag 423  Q
    ||||||||| | ||| ||||||||||    
T  55388308 attaatctccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 464
Target Start/End: Original strand, 934490 - 934593
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    ||||||||||||||||| | ||||   | |||||||| ||||||||||| | ||| ||||||||||||||| |||||| |||| ||||||| |||  |||    
T  934490 cataatgttctatcatatatcataaccctatccaactcattaatctctagaactttcttaatagtttctctaatagtttttct-agtcttcctctgcctc 934588  T
Q  460 tagtg 464  Q
    |||||    
T  934589 tagtg 934593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 508
Target Start/End: Complemental strand, 2589295 - 2589147
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactc 459  Q
    |||| |||||||||| |||||||| ||  |||||||| ||||||||||| || | |||| ||||||||||||||  || ||||| ||| |  |||| |||    
T  2589295 catagtgttctatcaaaaaccatattttcatccaactcattaatctctagatccatcttgatagtttctcttatgctttttctaggtcgtgctctacctc 2589196  T
Q  460 tagtgattcgattgccctccatctggtctaccctccttactacataatc 508  Q
    |||| |||  | | |||||||| || ||||| ||||| |||||| ||||    
T  2589195 tagtaatttaactcccctccatttgatctactctcctaactacagaatc 2589147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 6843838 - 6843762
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 436  Q
    ||||||||||||| ||| | |||| ||| ||| |||| ||||||||||| ||| ||||||||||| |||||||||||    
T  6843838 cataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagtctctcttatagt 6843762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 20047629 - 20047581
Alignment:
Q  390 atccaactgattaatctctatatcttctt-aatagtttctcttatagtt 437  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  20047629 atccaactcattaatctctagatcttctttaatagtttctcttatagtt 20047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 21214641 - 21214729
Alignment:
Q  357 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaa 444  Q
    ||||||||||| ||||||||| | |||| |||  ||||||| |||| ||| || | ||| |||||||||||||||||||||| ||||||    
T  21214641 acgtcataatgctctatcatacatcatatttctctccaactcattactctatagacctttcttaatagtttctcttatagtttttctaa 21214729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 31459088 - 31459044
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||    
T  31459088 acatgcccaaaccacctaagcctattttctaccatcttttctact 31459044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 38570971 - 38571015
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||    
T  38570971 acatgcccaaaccacctaagcctagtttccactatcttttgtact 38571015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 45184184 - 45184297
Alignment:
Q  353 aattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttca 451  Q
    ||||||||||||||||| ||| |||||||||   |  || ||||| |||||||||| |||| ||| ||||||||  |||||||||| ||||| ||||||     
T  45184184 aattacgtcataatgttttattataaaccatgagtaaattcaactcattaatctctttatctttcataatagtt--tcttatagtttttctaggtcttcc 45184281  T
Q  452 tctaactctagtgatt 467  Q
    |||| |||| ||||||    
T  45184282 tctacctcttgtgatt 45184297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 47611785 - 47611741
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||||||||||||||||||||||||||   |||||||||||    
T  47611785 acatgcccaaaccacctaagcctattttccatcatcttttctact 47611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 49987486 - 49987442
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||    
T  49987486 acatgaccaaaccacctaagcctattttccaccatcttttctact 49987442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 26024988 - 26025047
Alignment:
Q  371 tatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctc 429  Q
    |||||||||||||   ||||||||||| ||||||||||| ||| ||||||||||||||||    
T  26024988 tatcataaaccatgtctcgatccaactcattaatctctagatctttcttaatagtttctc 26025047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 437
Target Start/End: Original strand, 42293326 - 42293401
Alignment:
Q  363 taatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagtt 437  Q
    ||||| ||||||||| ||||||  || ||| |||| |||||| |||| ||||| ||||||||||||||||||||||    
T  42293326 taatgctctatcatataccatatgtctatctaactcattaatttctagatctttcttaatagtttctcttatagtt 42293401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 507
Target Start/End: Complemental strand, 54470418 - 54470283
Alignment:
Q  373 tcataaaccatacttcgatccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgat 471  Q
    ||||| |||||| ||| |||||||| ||||||||||| | |||  ||||||| ||||||||||||| ||||  |||||| | |  ||||||| ||| ||     
T  54470418 tcatataccatatttctatccaactcattaatctctagaactttattaatagattctcttatagtttttcttggtcttcttttgcctctagtaatttgac 54470319  T
Q  472 tgccctccatctggtctaccctccttactacataat 507  Q
    | | |||||| || | ||| ||||||||||||||||    
T  54470318 tactctccatttgatttactctccttactacataat 54470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 466
Target Start/End: Original strand, 55768546 - 55768665
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttata-gttcttctaagt 446  Q
    |||||||| ||  |||||||||||||||| ||||||||| ||||||||| ||| |||| ||  || ||||||| ||||||| |||||  || ||||| ||    
T  55768546 attaaattgcgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagtttcttttatatctttttctatgt 55768645  T
Q  447 cttcatctaactctagtgat 466  Q
    |||| |||  ||||||||||    
T  55768646 cttcttctgcctctagtgat 55768665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 466
Target Start/End: Original strand, 55832802 - 55832921
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttata-gttcttctaagt 446  Q
    |||||||| ||  |||||||||||||||| ||||||||| ||||||||| ||| |||| ||  || ||||||| ||||||| |||||  || ||||| ||    
T  55832802 attaaattccgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagtttcttttatatctttttctatgt 55832901  T
Q  447 cttcatctaactctagtgat 466  Q
    |||| |||  ||||||||||    
T  55832902 cttcttctgcctctagtgat 55832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 460
Target Start/End: Complemental strand, 8286719 - 8286562
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 398  Q
    |||||||||||| |||||||||||||| | | | || |||| | |||||||| |     ||||||| ||||||||||||||||| | || |||||||||     
T  8286719 aacaacaaccaagccttatcccactaagtgggggcggctacatggatcaaatga-----cgtcatagtgttctatcataaaccaaatttggatccaactc 8286625  T
Q  399 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 460  Q
    ||| | ||||| || |||  |||| |||||||| |||||| | ||| |||||| |||| ||||    
T  8286624 attgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctct 8286562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 508
Target Start/End: Original strand, 31897517 - 31897635
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| ||| ||||||| ||| ||| |||||||||||||||||||| ||||| |||| |  ||| ||||||||||  || | ||||||||||  || |    
T  31897517 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatctaatcga 31897616  T
Q  490 ccctccttactacataatc 508  Q
    | ||||| |||||| ||||    
T  31897617 ctctcctaactacagaatc 31897635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 508
Target Start/End: Original strand, 31961355 - 31961473
Alignment:
Q  391 tccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 489  Q
    ||||||| ||| ||||||| ||||| | |||||||||||||||||||| ||||| |||| |  ||| ||||||||||| || | | ||||||||  || |    
T  31961355 tccaactcatttatctctagatctttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatttgactcctctccatctaatcca 31961454  T
Q  490 ccctccttactacataatc 508  Q
    | ||||| |||||| ||||    
T  31961455 ctctcctaactacagaatc 31961473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 415
Target Start/End: Complemental strand, 41192284 - 41192230
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 415  Q
    |||||||||||| |||| |||||| ||| |||||||| ||||||||||| |||||    
T  41192284 cataatgttctaccatataccatatttctatccaactcattaatctctagatctt 41192230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 396
Target Start/End: Complemental strand, 1095725 - 1095633
Alignment:
Q  299 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaac 396  Q
    |||||||||||| |||||||||||||||  | ||||  ||| | |||||||| |     || |||||||||||||||||||||||| ||| |||||||    
T  1095725 aacaacaaccaagccttatcccactaaacggggtcgggtacatcgatcaaataa-----cgccataatgttctatcataaaccatatttcaatccaac 1095633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 20601702 - 20601747
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaact 397  Q
    |||||||||||||||||||||||||||| |||| ||  ||||||||    
T  20601702 aaattacgtcataatgttctatcataaatcatatttgaatccaact 20601747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 26510611 - 26510558
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatct 414  Q
    ||||||||||||||  |||||||| || ||||||||| ||||||||||| ||||    
T  26510611 cataatgttctatcgcaaaccatatttggatccaactcattaatctctaaatct 26510558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 29399036 - 29398991
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaact 397  Q
    |||||||| ||||||||||||||||||||| || |||| |||||||    
T  29399036 aaattacgccataatgttctatcataaaccttatttcgttccaact 29398991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 470
Target Start/End: Original strand, 45569097 - 45569178
Alignment:
Q  390 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcga 470  Q
    |||||||| ||| ||||||| || || ||||||||||||||||||| |  ||||| |||||| |||  ||||||||||||||    
T  45569097 atccaactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtcttcctctgcctctagtgattcga 45569178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 47612613 - 47612528
Alignment:
Q  364 aatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttctaagtct 448  Q
    ||||||||||||||||||||| || | |||| || ||||||||| |  |||| | |||||||||||||| ||||| ||||| ||||    
T  47612613 aatgttctatcataaaccatattttggtccacctcattaatctccaagtcttatctaatagtttctcttctagtttttctaggtct 47612528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 467
Target Start/End: Complemental strand, 48033254 - 48033201
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    |||||||||||||||||||||||| |  ||||||||| |||  |||||||||||    
T  48033254 ttcttaatagtttctcttatagttttcttaagtcttcctctgcctctagtgatt 48033201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 50967078 - 50967163
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagtt 437  Q
    |||||||| |||||| |||| ||||| |||||||| |  ||||||| ||| |||||||    |||||||||||||||||| |||||    
T  50967078 aaattacgacataattttctttcatataccatactgcattccaactcattgatctctagtctttcttaatagtttctcttgtagtt 50967163  T

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Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 380
Target Start/End: Complemental strand, 3979152 - 3979124
Alignment:
Q  352 aaattacgtcataatgttctatcataaac 380  Q
    |||||||||||||||||||||||||||||    
T  3979152 aaattacgtcataatgttctatcataaac 3979124  T

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Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 432
Target Start/End: Original strand, 7544602 - 7544654
Alignment:
Q  381 catacttcgatccaactgattaatctctatatc-ttcttaatagtttctctta 432  Q
    |||| ||||||| |||| ||||||||||| ||| |||||||||||||||||||    
T  7544602 catatttcgatcaaactcattaatctctagatctttcttaatagtttctctta 7544654  T

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Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 450
Target Start/End: Original strand, 8599054 - 8599090
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttc 450  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  8599054 ttcttaatagtttctcttatagtttttctaggtcttc 8599090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 456
Target Start/End: Complemental strand, 12494898 - 12494790
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtc 447  Q
    ||||||| |||||||| |||||||||||| |||| | || ||||||||| ||| | ||||| || |||  |||| |||||||| |||||| | ||| |||    
T  12494898 attaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtc 12494799  T
Q  448 ttcatctaa 456  Q
    ||| |||||    
T  12494798 ttcctctaa 12494790  T

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Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 22873646 - 22873694
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaact 397  Q
    |||||||||||| ||||||||||||||||| ||||| || || ||||||    
T  22873646 attaaattacgttataatgttctatcataacccatatttggaaccaact 22873694  T

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Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 28236241 - 28236197
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||||||||| |||||||||||||||||   ||||||||||    
T  28236241 acatgcccaaaccatctaagcctattttccaccaacttttctact 28236197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Complemental strand, 28497547 - 28497504
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||    
T  28497547 acatgcccaaaccacctaagcct-ttttccacaatcttttctact 28497504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 538
Target Start/End: Complemental strand, 35690350 - 35690322
Alignment:
Q  510 acatgcccaaaccacctaagcctattttc 538  Q
    |||||||||||||||||||||||||||||    
T  35690350 acatgcccaaaccacctaagcctattttc 35690322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 37773675 - 37773719
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    |||||||||||||| |||||||||||||| || | ||||||||||    
T  37773675 acatgcccaaaccatctaagcctattttctaccgacttttctact 37773719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 454
Target Start/End: Original strand, 38903831 - 38903870
Alignment:
Q  414 ttcttaatagtttctcttatagttcttctaagtcttcatct 454  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  38903831 ttcttaatagtttctcttatagtt-ttctaggtcttcatct 38903870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 46372217 - 46372141
Alignment:
Q  391 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgat 466  Q
    ||||||| ||| ||||||| ||| ||| |||||||||||||||||||| ||||| |||| |  ||| ||||||||||    
T  46372217 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgat 46372141  T

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Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 510 - 554
Target Start/End: Original strand, 51252685 - 51252729
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctact 554  Q
    ||||||||| |||||||||||||| |||||||  |||||||||||    
T  51252685 acatgcccataccacctaagcctagtttccaccatcttttctact 51252729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 449
Target Start/End: Original strand, 178509 - 178568
Alignment:
Q  391 tccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 449  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  178509 tccaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctt 178568  T

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Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 576
Target Start/End: Original strand, 44092 - 44154
Alignment:
Q  510 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 576  Q
    |||||||||||||||||||||||||||||| |  |||||||||    |||||| |||||||||||||    
T  44092 acatgcccaaaccacctaagcctattttccgccatcttttcta----ctataggtgctaccccaact 44154  T

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Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 160374 - 160465
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttct 442  Q
    |||||||| |||||||||||||||||||||||| |||| || |||| |||||| |||  ||| ||| |||||||||||||| ||||| ||||    
T  160374 aaattacgccataatgttctatcataaaccatatttcggtcgaactcattaatttcttaatctttcctaatagtttctcttgtagtttttct 160465  T

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Target: scaffold0373 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 2360 - 2436
Alignment:
Q  361 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 436  Q
    ||||||||||||| ||| | |||| ||| ||| |||| ||||||||||| ||| ||||||||||| |||||||||||    
T  2360 cataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagtctctcttatagt 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 352 - 450
Target Start/End: Complemental strand, 66770 - 66670
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccatactt-cgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtctt 449  Q
    |||||||| |||||||||||||||||| ||||| || | ||| |||| ||||||||||| ||| ||||||||| ||| | ||||| || ||||| |||||    
T  66770 aaattacgccataatgttctatcataagccatatttcctatctaactcattaatctctagatctttcttaataattttttttataatttttctaggtctt 66671  T
Q  450 c 450  Q
    |    
T  66670 c 66670  T

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Target: scaffold0325 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 467
Target Start/End: Complemental strand, 11982 - 11913
Alignment:
Q  399 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 467  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||  ||||| | |  |||||||||||    
T  11982 attaatctctagatccttcttaatagtttctcttatagtttttctagttcttcttttgcctctagtgatt 11913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 402
Target Start/End: Complemental strand, 39554 - 39501
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgatta 402  Q
    ||||||||||| ||| |||||||||||||||||| | || ||||||||| ||||    
T  39554 attaaattacgccatcatgttctatcataaaccacatttggatccaactcatta 39501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 456
Target Start/End: Original strand, 25579 - 25687
Alignment:
Q  349 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtc 447  Q
    ||||||| |||||||| |||||||||||| |||| | || ||||||||| ||| | ||||| || |||  |||| |||||||| |||||| | ||| |||    
T  25579 attaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtc 25678  T
Q  448 ttcatctaa 456  Q
    ||| |||||    
T  25679 ttcctctaa 25687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 352 - 384
Target Start/End: Original strand, 58276 - 58308
Alignment:
Q  352 aaattacgtcataatgttctatcataaaccata 384  Q
    |||||||| ||||||||||||||||||||||||    
T  58276 aaattacgacataatgttctatcataaaccata 58308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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